mRNA_E-siliculosus-1a_F_contig123.1443.1 (mRNA) Ectocarpus siliculosus Ec863f_EcPH12_90f female
|
Overview
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig123.1443.1 vs. uniprot
Match: A0A6H5JQJ6_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JQJ6_9PHAE) HSP 1 Score: 624 bits (1609), Expect = 2.690e-219 Identity = 322/336 (95.83%), Postives = 326/336 (97.02%), Query Frame = 1
Query: 73 MVGQKSSRFAFVGVSAWLVAGSSAFVLPSLQTARTAAVPSAPSASTSVFCGRPAAVASSSHEATAAGAGRRRGGEGGLRMAESEKLEVSLKKPMGLVLEENVGGFGGLRVKEVADGGSAQEDGTVRVGDQLLEVQGENVKGIDFDEGMKKLMDAPEDGVKLKLFRGLASDLYNPQVYFDIEINGEDKGRILMQLRSDVVPKTAENFRQLCTGEAPDGKSFKDTIFHRVIPGFMLQGGDFDNADGTGGSSIYGAKFEDENFNLKHTGPGVLSMANAGPGTNGSQFFICVAKTPWLDDKHVVFGEVIDGARTVKDIELLGSSGGKPSKKIKIVDCGQL 1080
MVGQKSSRFAF GVSAWLVA SSAFVLPSLQTARTAAVPSAPSASTSVFCGRPAAVASSSHEATAAG GR GLRMAESE+LEVSLKKPMGLVLEENVGGFGGLRVKEVADGGSAQEDGTVRVGDQLLEVQGENVKGIDFDEGMKKLMDAPEDGVKLKLFRGLASDLYNP+VYFDIEINGEDKGRILMQLRSDVVPKTAENFRQLCTGEAPDGKS+K TIFHRVIPGFMLQGGDFDNADGTGGSSIYGAKFEDENFNLKHTGPGVLSMANAGPGTNGSQFFICVAKTPWLDDKHVVFGEVIDGARTVKDIELLGSSGGKPSK+IKIVDCGQL
Sbjct: 1 MVGQKSSRFAFAGVSAWLVARSSAFVLPSLQTARTAAVPSAPSASTSVFCGRPAAVASSSHEATAAGVGRXXXXXXGLRMAESEELEVSLKKPMGLVLEENVGGFGGLRVKEVADGGSAQEDGTVRVGDQLLEVQGENVKGIDFDEGMKKLMDAPEDGVKLKLFRGLASDLYNPKVYFDIEINGEDKGRILMQLRSDVVPKTAENFRQLCTGEAPDGKSYKGTIFHRVIPGFMLQGGDFDNADGTGGSSIYGAKFEDENFNLKHTGPGVLSMANAGPGTNGSQFFICVAKTPWLDDKHVVFGEVIDGARTVKDIELLGSSGGKPSKQIKIVDCGQL 336
BLAST of mRNA_E-siliculosus-1a_F_contig123.1443.1 vs. uniprot
Match: W7TD66_9STRA (Peptidyl-prolyl cis-trans isomerase n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TD66_9STRA) HSP 1 Score: 299 bits (765), Expect = 8.730e-93 Identity = 147/253 (58.10%), Postives = 182/253 (71.94%), Query Frame = 1
Query: 322 EKLEVSLKKPMGLVLEENVGGFGGLRVKEVADGGSAQEDGTVRVGDQLLEVQGENVKGIDFDEGMKKLMDAPEDGVKLKLFRGLASDLYNPQVYFDIEINGEDKGRILMQLRSDVVPKTAENFRQLCTGEAPDGKSFKDTIFHRVIPGFMLQGGDFDNADGTGGSSIYGAKFEDENFNLKHTGPGVLSMANAGPGTNGSQFFICVAKTPWLDDKHVVFGEVIDGARTVKDIELLGSSGGKPSKKIKIVDCGQL 1080
E ++V L+KPMG+VLEEN G+ VK ++ GG+A G ++ GD L+ VQGE V G D D + + +AP + V+++ +RG DL NPQV+FDI+I GE GRI +LR DVVPKTAENFR LCTGE G +K++ FHRVIPGFM QGGDF + DG GG SIYGAKF+DENF L H GPG+LSMANAGP TNGSQFF+C +TPWLD KHVVFG+V +G +K IE +GS GK S + I DCGQL
Sbjct: 44 EFVDVMLQKPMGIVLEENDPKLQGVYVKSLSQGGAAAASGKIQAGDHLVSVQGEMVTGKDLDAVLSTVGNAPSESVQMRFYRGALGDLINPQVWFDIDIGGERAGRITCRLRKDVVPKTAENFRALCTGEK--GFGYKNSAFHRVIPGFMCQGGDFTSGDGRGGKSIYGAKFDDENFELTHDGPGILSMANAGPNTNGSQFFLCTVETPWLDGKHVVFGQVTEGLDILKKIEAVGSQVGKTSVPVMIADCGQL 294
BLAST of mRNA_E-siliculosus-1a_F_contig123.1443.1 vs. uniprot
Match: A0A7S2V295_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V295_9STRA) HSP 1 Score: 295 bits (754), Expect = 4.870e-91 Identity = 146/253 (57.71%), Postives = 180/253 (71.15%), Query Frame = 1
Query: 322 EKLEVSLKKPMGLVLEENVGGFGGLRVKEVADGGSAQEDGTVRVGDQLLEVQGENVKGIDFDEGMKKLMDAPEDGVKLKLFRGLASDLYNPQVYFDIEINGEDKGRILMQLRSDVVPKTAENFRQLCTGEAPDGKSFKDTIFHRVIPGFMLQGGDFDNADGTGGSSIYGAKFEDENFNLKHTGPGVLSMANAGPGTNGSQFFICVAKTPWLDDKHVVFGEVIDGARTVKDIELLGSSGGKPSKKIKIVDCGQL 1080
E L++++ KPMG++ EEN FGGL + + + G+A + ++ GDQL+EVQGE+VKG FD+ M L+ P +G ++K+FRG A++LYNP+VYFDI I GE GRI M LR D+ PKT ENFR LCTG+ +K TIFHRVIP FM QGGDF N DGTGG SIYG KF DENF L+H P +LSMANAG TNGSQFF+ + PWLD KHVVFGEV++G VK IE G+ GKP KI I DCGQL
Sbjct: 52 EFLDITIPKPMGILFEENDSNFGGLYINSINEDGAAAKT-ELKAGDQLVEVQGEDVKGYTFDKAMDALVAGPAEGTQIKIFRGDAAELYNPKVYFDISIGGEPSGRIKMCLRKDIAPKTVENFRSLCTGDNNKNIGYKGTIFHRVIPQFMCQGGDFTNFDGTGGYSIYGNKFMDENFTLRHDKPYLLSMANAGRNTNGSQFFLTTVECPWLDGKHVVFGEVVEGQDVVKAIESQGTRAGKPVAKIVIEDCGQL 303
BLAST of mRNA_E-siliculosus-1a_F_contig123.1443.1 vs. uniprot
Match: A0A7S3Y628_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y628_HETAK) HSP 1 Score: 295 bits (756), Expect = 8.750e-91 Identity = 144/253 (56.92%), Postives = 172/253 (67.98%), Query Frame = 1
Query: 322 EKLEVSLKKPMGLVLEENVGGFGGLRVKEVADGGSAQEDGTVRVGDQLLEVQGENVKGIDFDEGMKKLMDAPEDGVKLKLFRGLASDLYNPQVYFDIEINGEDKGRILMQLRSDVVPKTAENFRQLCTGEAPDGKSFKDTIFHRVIPGFMLQGGDFDNADGTGGSSIYGAKFEDENFNLKHTGPGVLSMANAGPGTNGSQFFICVAKTPWLDDKHVVFGEVIDGARTVKDIELLGSSGGKPSKKIKIVDCGQL 1080
E +E L KPMG+V EEN FGG+ +K + GSA DG +R GDQL+ VQG +V G FDE M L+ P +G LK FRG A+DLYNPQVYFD+ I G GR++M LR DV PKT ENFR LC G+ +K +IFHR+IP FM QGGDF+N DGTGG SIYG +F+DENF L H P +LSMANAG TNGSQFF+ PWLD KH VFGEV++G VK IE G + G+P K+ I DCGQL
Sbjct: 84 EFVEAKLSKPMGIVFEENEPQFGGIYIKSINSDGSAAADGALRPGDQLVAVQGASVAGKTFDEAMDALVAGPSEGTALKAFRGSAADLYNPQVYFDVSIGGAPAGRVVMALRKDVAPKTVENFRSLCVGDNDQKAGYKGSIFHRIIPNFMCQGGDFENFDGTGGWSIYGPRFKDENFALAHDRPYLLSMANAGRNTNGSQFFLTTVPCPWLDGKHTVFGEVVEGQDVVKAIEAQGDNSGRPKAKVVIEDCGQL 336
BLAST of mRNA_E-siliculosus-1a_F_contig123.1443.1 vs. uniprot
Match: A0A6U3Y7I0_9STRA (Peptidyl-prolyl cis-trans isomerase n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A6U3Y7I0_9STRA) HSP 1 Score: 286 bits (731), Expect = 4.320e-88 Identity = 143/257 (55.64%), Postives = 183/257 (71.21%), Query Frame = 1
Query: 316 ESEKLEVSLKKPMGLVLEENVGGFGGLRVKEVADGGSAQEDGTVRVGDQLLEVQGENVKGIDFDEGMKKLMDAPE-DGVKLKLFRGL-ASDLYNPQVYFDIEINGEDKGRILMQLRSDVVPKTAENFRQLCTGEAPDGKSFKDTIFHRVIPGFMLQGGDFDNADGTGGSSIYGAKFEDENFNLKHTGPGVLSMANAGPGTNGSQFFICVAKTPWLDDKHVVFGEVIDGARTVKDIELLGSSGGKPSKKIKIVDCGQL 1080
++E+LEV+L+KPMG++ EEN GG+ + ++GG+ + G+++VGDQLL + G + G+ FD+ M L+ A DGVKL+L RG+ + L NP+ +FDIEI+GE GR+ + LR+DVVP TAENFR LCTGE G +K + FHR+IP FM QGGDF DGTGG+SIYG KF DENF L H GPG LSMANAG TNGSQFFIC +KT +LD KHVVFG+V+DG + + LGS G P KI I DCGQL
Sbjct: 14 DAEELEVTLQKPMGIIFEENDPRMGGIYINGFSEGGAGESLGSLQVGDQLLAIDGADAIGLSFDDAMDLLVAANGVDGVKLRLARGVDPAVLVNPRTFFDIEIDGEPAGRLTLLLRADVVPDTAENFRMLCTGELGGGLGYKGSRFHRIIPDFMCQGGDFQRGDGTGGASIYGGKFRDENFELPHEGPGTLSMANAGRNTNGSQFFICTSKTDFLDGKHVVFGKVLDGMEVLAKMNSLGSPSGSPGAKIVIADCGQL 270
BLAST of mRNA_E-siliculosus-1a_F_contig123.1443.1 vs. uniprot
Match: A0A7S0XX03_HEMAN (Hypothetical protein n=1 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S0XX03_HEMAN) HSP 1 Score: 276 bits (707), Expect = 2.140e-83 Identity = 142/261 (54.41%), Postives = 176/261 (67.43%), Query Frame = 1
Query: 313 AESEKLEVSLKKPMGLVLEENVGGFGGLRVKEVADGGSAQE-----DGTVRVGDQLLEVQGENVKGIDFDEGMKKLMDAPEDGVKLKLFRGLASDLYNPQVYFDIEINGEDKGRILMQLRSDVVPKTAENFRQLCTGEAPDGKSFKDTIFHRVIPGFMLQGGDFDNADGTGGSSIYGAKFEDENFNLKHTGPGVLSMANAGPGTNGSQFFICVAKTPWLDDKHVVFGEVIDGARTVKDIELLGSSGGKPSKKIKIVDCGQL 1080
A E V +KKPMG+ EE GG G+ VK+++ S + + + +GD L+EV+G+ G DFD L D P + ++LK G + NP+ +FDIEI GE GRI M+LR D+VPKTA NF +LC+GE +G SFK +IFHRVIPGFM QGGDF NADGTGG SIYG F+DENF+LKHT GVLSMANAGP TNGSQFFIC TP+LD+KHVVFG+V G VK IE +GS GK + K+ I DCG +
Sbjct: 89 ASFEAYTVKMKKPMGITFEEAEGG--GIFVKKLSKANSDKANHFNIENKISLGDVLIEVEGKKCAGFDFDSAFALLADNPAEELELKFTPGGVMAVVNPRAFFDIEIGGEKAGRITMELRKDIVPKTASNFAELCSGENDNGYSFKGSIFHRVIPGFMCQGGDFTNADGTGGRSIYGKSFKDENFDLKHTSAGVLSMANAGPNTNGSQFFICTVPTPFLDNKHVVFGQVESGMDVVKKIEQVGSESGKTAAKVVIADCGVI 347
BLAST of mRNA_E-siliculosus-1a_F_contig123.1443.1 vs. uniprot
Match: A0A7S0VZV6_9CRYP (Hypothetical protein n=1 Tax=Hemiselmis tepida TaxID=464990 RepID=A0A7S0VZV6_9CRYP) HSP 1 Score: 274 bits (701), Expect = 1.090e-82 Identity = 142/259 (54.83%), Postives = 171/259 (66.02%), Query Frame = 1
Query: 322 EKLEVSLKKPMGLVLEENVGGFGGLRVKEVADGGSAQE------DGTVRVGDQLLEVQGENVKGIDFDEGMKKLMDAPEDGVKLKLFRGLASDLYNPQVYFDIEINGEDKGRILMQLRSDVVPKTAENFRQLCTGEAPDGKSFKDTIFHRVIPGFMLQGGDFDNADGTGGSSIYGAKFEDENFNLKHTGPGVLSMANAGPGTNGSQFFICVAKTPWLDDKHVVFGEVIDGARTVKDIELLGSSGGKPSKKIKIVDCGQL 1080
+ V LKKPMG+ EE GG G+ VK+++ SA E + + +GD L+EV+G+ G+DFD L + P + LK G + NP+ YFDIEI GE GRI M+LR D+VPKTA NF +LCTGE +F+ + FHRVIPGFM QGGDF N DGTGG SIYG F+DENF LKHT GVLSMANAGP TNGSQFF+C KT WLD KHVVFG+V +G VK +E +GS GK SK KI DCGQL
Sbjct: 85 KSYSVRLKKPMGITFEEADGG--GIFVKKISKA-SADEANAFYLENKISLGDVLIEVEGQKCAGMDFDSAFALLAENPSQELTLKFTPGGVMAVVNPRAYFDIEIGGEKAGRITMELRKDIVPKTATNFAELCTGENDMEYTFEGSTFHRVIPGFMCQGGDFTNGDGTGGKSIYGNSFKDENFELKHTSAGVLSMANAGPNTNGSQFFLCTVKTEWLDGKHVVFGQVTEGMEVVKALEAVGSQSGKTSKPAKITDCGQL 340
BLAST of mRNA_E-siliculosus-1a_F_contig123.1443.1 vs. uniprot
Match: L1K294_GUITC (PPIase cyclophilin-type domain-containing protein (Fragment) n=2 Tax=Guillardia theta TaxID=55529 RepID=L1K294_GUITC) HSP 1 Score: 266 bits (680), Expect = 1.390e-79 Identity = 140/257 (54.47%), Postives = 169/257 (65.76%), Query Frame = 1
Query: 322 EKLEVSLKKPMGLVLEENVGGFGGLRVKEVADGGSAQE------DGTVRVGDQLLEVQGENVKGIDFDEGMKKLMDAPEDGVKLKLFRGLASDLYNPQVYFDIEINGEDKGRILMQLRSDVVPKTAENFRQLCTGEAPDGKSFKDTIFHRVIPGFMLQGGDFDNADGTGGSSIYGAKFEDENFNLKHTGPGVLSMANAGPGTNGSQFFICVAKTPWLDDKHVVFGEVIDGARTVKDIELLGSSGGKPSKKIKIVDCG 1074
E V++KKPMGLV EEN G+ VK++ D SA + + + + D LL V GE+ G FDE + + P ++L RG +YNP+V+FDIEI GE GRI ++LR D PKT ENFR+LC+GE +G +K FHRVIPGFM QGGDF N DGTGG SIYG F DENF+LKH G+LSMANAGP TNGSQFFIC TP+LD KHVVFGEV DG VK IE +GSS GK + K+ I DCG
Sbjct: 80 EAYTVTMKKPMGLVFEENDSQAKGILVKKI-DKASADQANLFNLENKISIRDYLLRVNGESCLGKSFDEAFAMIAENPAQELELTFARGGVEAVYNPRVWFDIEIGGEKAGRIKIELRKDAAPKTVENFRKLCSGE--EGYGYKGCTFHRVIPGFMCQGGDFTNGDGTGGRSIYGKTFADENFDLKHDKAGILSMANAGPNTNGSQFFICTVPTPFLDGKHVVFGEVEDGMEVVKAIEAVGSSSGKTAAKVVIADCG 333
BLAST of mRNA_E-siliculosus-1a_F_contig123.1443.1 vs. uniprot
Match: A0A7S0L2M3_9EUKA (Peptidyl-prolyl cis-trans isomerase n=1 Tax=Coccolithus braarudii TaxID=221442 RepID=A0A7S0L2M3_9EUKA) HSP 1 Score: 248 bits (632), Expect = 1.270e-73 Identity = 119/164 (72.56%), Postives = 136/164 (82.93%), Query Frame = 1
Query: 589 NPQVYFDIEINGEDKGRILMQLRSDVVPKTAENFRQLCTGEAPDGKSFKDTIFHRVIPGFMLQGGDFDNADGTGGSSIYGAKFEDENFNLKHTGPGVLSMANAGPGTNGSQFFICVAKTPWLDDKHVVFGEVIDGARTVKDIELLGSSGGKPSKKIKIVDCGQL 1080
NP+VYFDIEI GE GRI+MQLR+DVVPKTAENFR LCTG+ G + D+IFHRVIPGFM QGGDF N +GTGG SIYG KFEDENF LKHTG GVLSMANAGPGTNGSQFF+C AKT WL+DKHVVFG+V+ G V IE +GSSGG+ SK++KIV CG++
Sbjct: 87 NPRVYFDIEIGGEAAGRIVMQLRADVVPKTAENFRALCTGDK--GFGYADSIFHRVIPGFMCQGGDFTNHNGTGGKSIYGEKFEDENFQLKHTGKGVLSMANAGPGTNGSQFFLCTAKTAWLNDKHVVFGKVVKGYPVVVGIEAVGSSGGETSKEVKIVGCGEM 248
BLAST of mRNA_E-siliculosus-1a_F_contig123.1443.1 vs. uniprot
Match: D3WFS1_CONAN (Peptidyl-prolyl cis-trans isomerase n=1 Tax=Conus anemone novaehollandiae TaxID=718021 RepID=D3WFS1_CONAN) HSP 1 Score: 243 bits (619), Expect = 4.000e-73 Identity = 118/164 (71.95%), Postives = 130/164 (79.27%), Query Frame = 1
Query: 589 NPQVYFDIEINGEDKGRILMQLRSDVVPKTAENFRQLCTGEAPDGKSFKDTIFHRVIPGFMLQGGDFDNADGTGGSSIYGAKFEDENFNLKHTGPGVLSMANAGPGTNGSQFFICVAKTPWLDDKHVVFGEVIDGARTVKDIELLGSSGGKPSKKIKIVDCGQL 1080
NPQV+FDIEI G+ GRI+M+LR+DVVPKTAENFR LCTGE G FK + FHRVIPGFM QGGDF +GTGG SIYG KFEDENF LKHTG G+LSMANAGP TNGSQFF+C AKT WLD KHVVFG V+DG VK IEL+GS G SKK+ I DCGQL
Sbjct: 3 NPQVFFDIEIGGKPVGRIVMELRADVVPKTAENFRALCTGEK--GFGFKGSSFHRVIPGFMCQGGDFTRHNGTGGKSIYGNKFEDENFKLKHTGAGILSMANAGPNTNGSQFFLCTAKTQWLDGKHVVFGNVVDGMDVVKAIELVGSDSGTTSKKVVIADCGQL 164 The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig123.1443.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-siliculosus-1a_F_contig123.1443.1 >prot_E-siliculosus-1a_F_contig123.1443.1 ID=prot_E-siliculosus-1a_F_contig123.1443.1|Name=mRNA_E-siliculosus-1a_F_contig123.1443.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=337bp MVGQKSSRFAFVGVSAWLVAGSSAFVLPSLQTARTAAVPSAPSASTSVFCback to top mRNA from alignment at E-siliculosus-1a_F_contig123:25386..35234- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-siliculosus-1a_F_contig123.1443.1 ID=mRNA_E-siliculosus-1a_F_contig123.1443.1|Name=mRNA_E-siliculosus-1a_F_contig123.1443.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=9849bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig123:25386..35234- (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top Coding sequence (CDS) from alignment at E-siliculosus-1a_F_contig123:25386..35234- >mRNA_E-siliculosus-1a_F_contig123.1443.1 ID=mRNA_E-siliculosus-1a_F_contig123.1443.1|Name=mRNA_E-siliculosus-1a_F_contig123.1443.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=2022bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig123:25386..35234- (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top |