mRNA_E-siliculosus-1a_F_contig1229.1438.1 (mRNA) Ectocarpus siliculosus Ec863f_EcPH12_90f female
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Overview
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig1229.1438.1 vs. uniprot
Match: D8LAZ5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LAZ5_ECTSI) HSP 1 Score: 1092 bits (2825), Expect = 0.000e+0 Identity = 805/968 (83.16%), Postives = 818/968 (84.50%), Query Frame = 2
Query: 83 MDKKGSGDLFDDLFGFSKSRPSPPPRREAVDLDASIDSDDEFSLPDTPPRPTPPPATEKIKSPTQVEGGAVDEGXXXXXXXXXXXXXEPREPDDHDFAKIKSKS--KPKFDQTKLEDFPQVANQINSYWNSITPDQLVWCQDCPAIVVPESLHIFAKVKAPPDGVMAYGPRAKSVTPSRNRFVILQFLPLCLTCHAKPETPYTCVRGKPVESVLPYNTVMAGKKAGQDRALGPEDSWADADYHFRKAKGKSKQLSKQNWDVTLEHAQKFLNRALELKAKKAQEDEEEXXXXXXXXXXXXXXXXXXXXXXXXXSSAGEDGGEDADDDTPKYSSKPVQMERGLPLAPGDRIFYWDRTKVVGLASSRREATILEIRGKKAAREANVELLVLDNHQVVLNDWVIQKYIKDEDTGEMQLDNRGAEVHHYKLKRGKLEGVDQRRHERMETLVDGFRKSITAYGAGDQLRNAPKRRSCESXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSSVGRKESLLGKEDADHAIAASIAKSNKRTKPKARVEPENEQETKGTDDKREVEDVSEASIAEAKMEXXXXXXXXXXXQVKKKQEXXXXXXXXXXXXXXXXXSKGKKKTKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRPENQQEIKKQETTTKGRENKQEVVDVSEEGEGEGKERGQRVSKAAPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAQEDAVRPSKKRSGGDGGKGGGDRNREAPAPIQTLPSRGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSSGEATTGRQEYVTVQKKPKLNLGQGGRSSAANGYVIPKKTPERDEYWIPKKKQGGGSTDLEWRVENKSSEHGVGSTGXXXXXXXXXSQRRRMAFTHDAARRNKLPKFKQPRPRAGRRDG 2980
MDKKGSGDLFDDLFGFSKSRPSPPPRREAVDLDA IDSDDEFSLPDTPPRPTPPPATEKIKSPTQV G XXXXXXXXXXXX EPRE D HD+AKIKSKS KPKFDQT+LE FPQ DCPAIVVPE LHIFAKVKAPPDGVMAYGPRAKSVTPSRNRFVILQFLPLCLTCHAKPETPY CVRGKPVESVLPYNTVMAGKKAGQDRALGPEDSWADADYHFRKAKGKSKQLSKQNWDVTLEHAQKFL+RALELKAKK QEDEE XXXXXXXXXXXXXXXXXXXXXXXXXSSAGEDGGE ADDD PKYSSK VQMERGLPLAPGDRIFYWDRTK+VGLASSRREATILEIRGKKAA+EANVELLVLDNHQVVLNDWVIQ+YIKDEDTGEMQLD RGAEVHHYKLKRGKLEGVDQRRHERMETLVDGFRKSITAYGAGDQLRNAPKRRSCESXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX S VGRKES LG+EDA HAIAASIAKS KRTKPK RVEPENEQETKGTDD++EVEDVSEASIAEAKM XXXXXXXXXXXQVKKKQEXXXXXXXXXXXXXXXXXSKGKKKT XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX RPENQQEIKKQE TTKGRENKQEVVDVSEE EGEGKERGQRVSKAAP AQE AV PSKKRSGGDGGKGGGDRNR+APAPIQT PSRG XXXXXXXXXXX SSGEATTGRQEY+TVQKKPKLN+GQGGRSSAANGYVIPKKTPERD YWIPKKKQGGGSTDLEWRVE KS EHG XXXXX SQRR MAFTHDAARRNKLPKFKQPRPRAG+RDG
Sbjct: 1 MDKKGSGDLFDDLFGFSKSRPSPPPRREAVDLDAIIDSDDEFSLPDTPPRPTPPPATEKIKSPTQV--GGXXXXXXXXXXXXXXXXAEPREADGHDYAKIKSKSMSKPKFDQTELEVFPQ---------------------DCPAIVVPEHLHIFAKVKAPPDGVMAYGPRAKSVTPSRNRFVILQFLPLCLTCHAKPETPYACVRGKPVESVLPYNTVMAGKKAGQDRALGPEDSWADADYHFRKAKGKSKQLSKQNWDVTLEHAQKFLSRALELKAKKVQEDEE-XXXXXXXXXXXXXXXXXXXXXXXXXSSAGEDGGEGADDDIPKYSSKSVQMERGLPLAPGDRIFYWDRTKIVGLASSRREATILEIRGKKAAKEANVELLVLDNHQVVLNDWVIQRYIKDEDTGEMQLDYRGAEVHHYKLKRGKLEGVDQRRHERMETLVDGFRKSITAYGAGDQLRNAPKRRSCESXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSVACGSGGGARS-VGRKESPLGEEDAGHAIAASIAKSKKRTKPKVRVEPENEQETKGTDDEQEVEDVSEASIAEAKMXXXXXXXXXXXXQVKKKQEXXXXXXXXXXXXXXXXXSKGKKKTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMRARPENQQEIKKQEATTKGRENKQEVVDVSEEAEGEGKERGQRVSKAAPTAAAAASGRGGHANDSSSERRPEKEVERVGQKIKEKREKGREAE----AQEGAVGPSKKRSGGDGGKGGGDRNRQAPAPIQTFPSRGGXXXXXXXXXXXESRETNKRKNRPPALPAA-SSGEATTGRQEYMTVQKKPKLNVGQGGRSSAANGYVIPKKTPERDAYWIPKKKQGGGSTDLEWRVEKKSPEHGG---XXXXXXGWSESQRRHMAFTHDAARRNKLPKFKQPRPRAGQRDG 935
BLAST of mRNA_E-siliculosus-1a_F_contig1229.1438.1 vs. uniprot
Match: A0A6H5KNL5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNL5_9PHAE) HSP 1 Score: 1061 bits (2743), Expect = 0.000e+0 Identity = 804/951 (84.54%), Postives = 823/951 (86.54%), Query Frame = 2
Query: 83 MDKKGSGDLFDDLFGFSKSRPSPPP-RREAVDLDASIDSDDEFSLPDTPPRPTPPPATEKIKSPTQVEGGAVDEGXXXXXXXXXXXXX--EPREPDDHDFAKIKSKSKPKFDQTKLEDFPQVANQINSYWNSITPDQLVWCQDCPAIVVPESLHIFAKVKAPPDGVMAYGPRAKSVTPSRNRFVILQFLPLCLTCHAKPETPYTCVRGKPVESVLPYNTVMAGKKAGQDRALGPEDSWADADYHFRKAKGKSKQLSKQNWDVTLEHAQKFLNRALELKAKKAQEDEEEXXXXXXXXXXXXXXXXXXXXXXXXXS--SAGEDGGEDADDDTPKYSSKPVQMERGLPLAPGDRIFYWDRTKVVGLASSRREATILEIRGKKAAREANVELLVLDNHQVVLNDWVIQKYIKDEDTGEMQLDNRGAEVHHYKLKRGKLEGVDQRRHERMETLVDGFRKSITAYGAGDQLRNAPKRRSCESXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSSVGRKESLLGKEDADHAIAASIAKSNKRTKPKARVEPENEQETKGTDDKREVEDVSEASIAEAKMEXXXXXXXXXXXQVKKKQEXXXXXXXXXXXXXXXXXSKGKKKTKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRPENQQEIKKQETTTKGRENKQEVVDVSEEGEGEGKERGQRVSKAAPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX----AQEDAVRPSKKRSGGDGGKGGGDRNREAPAPIQTLPSRGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSSGEATTGRQEYVTVQKKPKLNLGQGGRSSAANGYVIPKK-TPERDEYWIPKKKQGGGSTDLEWRVENKSSEHGVGSTGXXXXXXXXXSQRRRMAF 2905
MDKKGSGDLFDDLFGFSKSRPSPPP RREAVD DASIDS+DEFSLPDTPPRPTPPPA E IK PTQVEGGAVDEG EPREPD HDFAKIK KSKPKFDQTKLEDFPQV +QINSYW+SITPDQLVWCQDCPAIVVPE LHIFAKVKAPPD VMAYGPRAKSVTPSRNRFVILQFLPLC+TCHAKPETPYTCVRGKPVESVLPYNTVMAGKKAGQDRALGPEDSWADADYHFRKAKGKSKQL+KQNWDVTLEHAQKFL+RALELKAKKAQED XXXXXXXXXXXXXXXXXXXXXXXXX SAGEDGGE ADDDTPKY SKPVQMERGLPLAPGDRIFYWDRTKVVGLASSRREATILEIRGKKAA+EANVELLVLDNHQVVLNDWVIQ+YIKDEDTG MQLD RGAEV HYKLKRGKLEGVDQRRHERMETLVDGFRKSITAYGAGD LRNAPKRRSCESXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX S VG++ES LG EDA HAIAASIAKS KRTK KARVEPENE++T GTDDK+EVE+VSEASIAEAKM+ QV+KKQE XXXXXXXXXXXXXXXX KGK KTKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX E QQEI KQET TKGRENK EVVD SEE EGEGKERGQRVSK A XXXXXXXXXXXXXXXXXXX AQEDAV PSK+RSGG+GGKGGGD N EAPAPIQTL SRGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX GEATTGRQEY+TVQKKPKL LGQGGRSSAANGYVIPKK TPERDEYWIPKKKQGGGSTDLEWRVE KS EHG G SQRR MAF
Sbjct: 1 MDKKGSGDLFDDLFGFSKSRPSPPPPRREAVDFDASIDSEDEFSLPDTPPRPTPPPAAENIKPPTQVEGGAVDEGGGTSATGWGGGEAAAEPREPDGHDFAKIKGKSKPKFDQTKLEDFPQVTDQINSYWDSITPDQLVWCQDCPAIVVPERLHIFAKVKAPPDSVMAYGPRAKSVTPSRNRFVILQFLPLCMTCHAKPETPYTCVRGKPVESVLPYNTVMAGKKAGQDRALGPEDSWADADYHFRKAKGKSKQLAKQNWDVTLEHAQKFLSRALELKAKKAQEDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSAGEDGGEGADDDTPKYPSKPVQMERGLPLAPGDRIFYWDRTKVVGLASSRREATILEIRGKKAAKEANVELLVLDNHQVVLNDWVIQRYIKDEDTGGMQLDYRGAEVQHYKLKRGKLEGVDQRRHERMETLVDGFRKSITAYGAGDHLRNAPKRRSCESXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGARS-VGQQESPLGGEDAGHAIAASIAKSKKRTKSKARVEPENEEKTMGTDDKQEVENVSEASIAEAKMKPIARAEPEMEQQVEKKQEKXXXXXXXXXXXXXXXXFKGKNKTKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXETQQEITKQETMTKGRENKLEVVDASEEAEGEGKERGQRVSKTAXXXXXXXXXXXXXXXXXXXXHANDSSSEGRTEKEDERAGQKIKKKREKGHEAKAQEDAVGPSKRRSGGNGGKGGGDGNWEAPAPIQTLLSRGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGEATTGRQEYMTVQKKPKLTLGQGGRSSAANGYVIPKKNTPERDEYWIPKKKQGGGSTDLEWRVEKKSPEHGGGG-------GWSESQRRHMAF 943 The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig1229.1438.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90) Total hits: 2
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-siliculosus-1a_F_contig1229.1438.1 >prot_E-siliculosus-1a_F_contig1229.1438.1 ID=prot_E-siliculosus-1a_F_contig1229.1438.1|Name=mRNA_E-siliculosus-1a_F_contig1229.1438.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=967bp MDKKGSGDLFDDLFGFSKSRPSPPPRREAVDLDASIDSDDEFSLPDTPPRback to top mRNA from alignment at E-siliculosus-1a_F_contig1229:23559..34073- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-siliculosus-1a_F_contig1229.1438.1 ID=mRNA_E-siliculosus-1a_F_contig1229.1438.1|Name=mRNA_E-siliculosus-1a_F_contig1229.1438.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=10515bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1229:23559..34073- (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top Coding sequence (CDS) from alignment at E-siliculosus-1a_F_contig1229:23559..34073- >mRNA_E-siliculosus-1a_F_contig1229.1438.1 ID=mRNA_E-siliculosus-1a_F_contig1229.1438.1|Name=mRNA_E-siliculosus-1a_F_contig1229.1438.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=5802bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1229:23559..34073- (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top |