mRNA_E-siliculosus-1a_F_contig1229.1437.1 (mRNA) Ectocarpus siliculosus Ec863f_EcPH12_90f female
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Overview
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig1229.1437.1 vs. uniprot
Match: D8LAZ4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LAZ4_ECTSI) HSP 1 Score: 1356 bits (3510), Expect = 0.000e+0 Identity = 836/935 (89.41%), Postives = 855/935 (91.44%), Query Frame = 1
Query: 406 MLAKIRRAAILRAVRNRNILSIMVSAETLVQEQLDEAKFFVKNVIALRDFKTQRAARIIQGGFRHRAEVTRRSAAMIVRTTRRWLMRGSLRRARIRRGIRRYRGSLSRRNLGLKGTSPFALTVARELPREGRWWDSGLPVAPRPKWGTLRVENEEARSRHRALSLADLIRTGQQKRDDXXXXXRAGNARASMAPAEGGGGVGGTSPTWKAKGWGSXXXXKGNAIGIETTXXXXXXXXXXXMRIEAGGTAAAIGIGFSKGASIRRAASMVDPREAEKAALMDEIERRHARRTAVAPPFNTLSIVEKHQQREREFQEQREKRRAAXXXXXXXXXXXXXXEIAEAARRKGLEAELLAKMEKEKARKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXASFERERANWLERAKRKRRAEEKAKRRKDGGVRGAEGSQNMSATAPVHHRTKKHAAPDRTRPALAPMTTXXXXXXXXXXXXXXXXXXXXXFLPAGGGSGNHQPGGVTGGESAISSSCSTLPRVHRSVRVAAGVRDGRRKVTPHGTTVPALPVVPGYKAMAAGGTGCVEKRKRPRRRPPKGNAAAEGGRGRVQLDGGASTCATDVYDEILNTRSDTADPLPTSGGDSAGMALRNLGGEVGFGLRDSVLQESVANILPGGPRELHQREVEEEXXXXXXAGRGSGHLSSCLAEDECLSTETLDSVFAVPASGVGSGGGGGEANAPERLGGLSPGWSSRSSRRSSEGGESSSGFLSDSAAIREGKALLSEGPVGGWGKARTDGGVTSDAATAATVATVVAGIITEARERHAASFSPGEVGAGQADPKQHTIKTTSPAALPDNVSDMTDNQMPIDQRQQEQEQEQIVEDELTAQSPTSSLSSVGSGKYDVAETETEIGVESADLLEGGRLYTADDDEQKGVGGSGLGSFESQ 3210
MLAKIRRAAILRAVRNRNILSIMVSAETLVQEQLDEAKFFVKNVIALRDFKTQRAARIIQGGFRHRAEVTRRSAAMIVR TRRWLMRGSLRRARIRRGIRRYRGSLSRRNLGLK TSPFALTVARE PREGRWWDSGLPVAPRPKWGTLRVENEEARSRHRALSLADLIRTGQQK D XXXXXRAGNARASMAPAEGGGGVGGTSPTW+AKGWGS KGNAIGIE T MR +AGGTAA IG+GFSKGAS+RRAASMVDPREAEKAALMDEIERRHARRTAVAPPFNTLSIVEKHQQREREFQEQREKRRAA XXXXXX EIAEAARRK LEAELLA+MEKEKARK XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX ASFERERANWLERAKRK RAEEKAKRRKDG RGAEGSQ+MSATAPVHHRTKKHAAPDRTRPALA MT XXXXXXXXXXXXXXXXXXXXX QPGGVTGGESAISSSCSTLPRV RSVRVAAGVRDGRRKV PHG TVPALPVVPGYKAMAAGGTGCVEKRKRPRRRPPKGNAAA+GGRGRV+LDGGA+TCATDVYDEILNTR+ TADPLPTSGGD AGM LRN GGEVGFGLR+SVLQESVANILPGGPRE HQREV XXXXXX GRGSGH SSCLAEDECLSTETLDSVFAVP SGVGSGGGGGEANAPE LGGLSPGWSSRSSRRSSE G++SSGFLSDSAAIREGKALLS+GPVGGWGKART+GGVTS AATAA V TVV GIITEARERHAASFSPGEVGAGQA PKQHTIKTTSPAALPDNVSD+TDNQMPIDQRQQEQEQ+QIVEDELTAQSPTSSLSSVG+G+YDVAETETEIGVESADLLEGGRLYTADDDE K VGGSGLGSFESQ
Sbjct: 1 MLAKIRRAAILRAVRNRNILSIMVSAETLVQEQLDEAKFFVKNVIALRDFKTQRAARIIQGGFRHRAEVTRRSAAMIVRATRRWLMRGSLRRARIRRGIRRYRGSLSRRNLGLKETSPFALTVAREFPREGRWWDSGLPVAPRPKWGTLRVENEEARSRHRALSLADLIRTGQQKSDXXXXXXRAGNARASMAPAEGGGGVGGTSPTWEAKGWGSGSSSKGNAIGIEATGGGRRNRNSNSMRTDAGGTAATIGMGFSKGASVRRAASMVDPREAEKAALMDEIERRHARRTAVAPPFNTLSIVEKHQQREREFQEQREKRRAAAERETRRXXXXXXREIAEAARRKALEAELLAEMEKEKARKRLEKIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLAAEASFERERANWLERAKRKPRAEEKAKRRKDGRGRGAEGSQDMSATAPVHHRTKKHAAPDRTRPALASMTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQPGGVTGGESAISSSCSTLPRVDRSVRVAAGVRDGRRKVAPHGATVPALPVVPGYKAMAAGGTGCVEKRKRPRRRPPKGNAAAQGGRGRVKLDGGATTCATDVYDEILNTRNGTADPLPTSGGDGAGMVLRNSGGEVGFGLRNSVLQESVANILPGGPREQHQREVXXXXXXXXXVGRGSGHRSSCLAEDECLSTETLDSVFAVPESGVGSGGGGGEANAPEGLGGLSPGWSSRSSRRSSEEGDTSSGFLSDSAAIREGKALLSDGPVGGWGKARTEGGVTSAAATAAAVETVVGGIITEARERHAASFSPGEVGAGQAGPKQHTIKTTSPAALPDNVSDVTDNQMPIDQRQQEQEQQQIVEDELTAQSPTSSLSSVGNGEYDVAETETEIGVESADLLEGGRLYTADDDEHKDVGGSGLGSFESQ 935
BLAST of mRNA_E-siliculosus-1a_F_contig1229.1437.1 vs. uniprot
Match: A0A6H5KYM1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KYM1_9PHAE) HSP 1 Score: 702 bits (1811), Expect = 5.400e-242 Identity = 415/487 (85.22%), Postives = 430/487 (88.30%), Query Frame = 1
Query: 1750 MSATAPVHHRTKKHAAPDRTRPALAPMTTXXXXXXXXXXXXXXXXXXXXXFLPAGGGSGNHQPGGVTGGESAISSSCSTLPRVHRSVRVAAGVRDGRRKVTPHGTTVPALPVVPGYKAMAAGGTGCVEKRKRPRRRPPKGNAAAEGGRGRVQLDGGASTCATDVYDEILNTRSDTADPLPTSGGDSAGMALRNLGGEVGFGLRDSVLQESVANILPGGPRELHQREVEEEXXXXXXAGRGSGHLSSCLAEDECLSTETLDSVFAVPASGVGSGGGGGEANAPERLGGLSPGWSSRSSRRSSEGGESSSGFLSDSAAIREGKALLSEGPVGGWGKARTDGGVTSDAATAATVATVVAGIITEARERHAASFSPGEVGAGQADPKQHTIKTTSPAALPDNVSDMTDNQMPIDQRQQEQEQEQIVEDELTAQSPTSSLSSVGSGKYDVAETETEIGVESADLLEGGRLYTADDDEQKGVGGSGLGSFESQ 3210
MSATAPVHHRTKKHAAPDRTRP LAPMT XXXXXXXXXXXXXXXXXXXXX TGG+SAISSSCSTLPRVHR+VRVAAGVRDGRRKV PHG TVPALPVVPGYKAMAAGGTGCVE RKRPRRRP KGNAAAE GRGRVQLDGGA+TCATDV+DEILNT + TADPLPTSGGD AG+ALR GGEVGFGL+DSVLQESVANILPGGPRE HQREV XXXXXX H SCLAEDE LSTETLDSVFAVP SGVGSGGGG EANAPE LGGLSPGWSSRSSRRSSEGG+SSSGFLSDSAAIR+GK LLS+GPVG WGKARTDGGVTSDAATAA V TVV GIITEARERHAASFSPGEVGAGQADP QHTIKTTSP ALPD+ SDMTDNQMPI+QRQQEQE +QIVEDELTAQSPTSSLSSVGSG+YDVAETETEIGVESADLLEG R Y ADDD+QKGVGG GLGSFESQ
Sbjct: 1 MSATAPVHHRTKKHAAPDRTRPTLAPMTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKTGGDSAISSSCSTLPRVHRAVRVAAGVRDGRRKVAPHGATVPALPVVPGYKAMAAGGTGCVETRKRPRRRPRKGNAAAERGRGRVQLDGGATTCATDVFDEILNTGNGTADPLPTSGGDGAGLALRISGGEVGFGLKDSVLQESVANILPGGPREQHQREVXXXXXXXXXXXXXXXHRRSCLAEDEFLSTETLDSVFAVPESGVGSGGGGREANAPEGLGGLSPGWSSRSSRRSSEGGDSSSGFLSDSAAIRDGKTLLSDGPVGDWGKARTDGGVTSDAATAAAVETVVGGIITEARERHAASFSPGEVGAGQADPNQHTIKTTSPTALPDDTSDMTDNQMPINQRQQEQEHQQIVEDELTAQSPTSSLSSVGSGEYDVAETETEIGVESADLLEGRRRYIADDDDQKGVGGGGLGSFESQ 487
BLAST of mRNA_E-siliculosus-1a_F_contig1229.1437.1 vs. uniprot
Match: A0A6H5KZC1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KZC1_9PHAE) HSP 1 Score: 486 bits (1250), Expect = 3.770e-160 Identity = 278/324 (85.80%), Postives = 284/324 (87.65%), Query Frame = 1
Query: 406 MLAKIRRAAILRAVRNRNILSIMVSAETLVQEQLDEAKFFVKNVIALRDFKTQRAARIIQGGFRHRAEVTRRSAAMIVRTTRRWLMRGSLRRARIRRGIRRYRGSLSRRNLGLKGTSPFALTVARELPREGRWWDSGLPVAPRPKWGTLRVENEEARSRHRALSLADLIRTGQQKRDDXXXXXRAGNARASMAPAEGG-GGVGGTSPTWKAKGWGSXXXXKGNAIGIETTXXXXXXXXXXXMRIEAGGTAAAIGIGFSKGASIRRAASMVDPREAEKAALMDEIERRHARRTAVAPPFNTLSIVEKHQQREREFQEQREKRRAA 1374
MLAKIRRAAILRAVRNRNIL+IMVS ETLVQEQLDEAKFFVKNVIALRDFKTQRAARIIQGGFRHRAEVTRRS AMIVR TRRWLMRGSLRRARIRRGIRRYRGSLSRRNLGL+ TSPFALTVARE PREGRWWDSG VAPRPKWGTLRV NEEARSR RALSLADLI TGQQK XXXX RAGNAR +M+P EGG GGV GTSPTWKAKG GS KGNAIGIE T +R EAGGTAAAIGIGFSKGA+IRRAASMVDPREAEKAALMDEI RRHARRTAVAP FNTLSI EKHQ REREFQEQREKRRAA
Sbjct: 1 MLAKIRRAAILRAVRNRNILNIMVSVETLVQEQLDEAKFFVKNVIALRDFKTQRAARIIQGGFRHRAEVTRRSVAMIVRATRRWLMRGSLRRARIRRGIRRYRGSLSRRNLGLQETSPFALTVAREFPREGRWWDSGPSVAPRPKWGTLRVRNEEARSRQRALSLADLIITGQQKSXXXXXXGRAGNARVTMSPLEGGSGGVSGTSPTWKAKGRGSGSSSKGNAIGIEATGGGRRNKHYDSIRTEAGGTAAAIGIGFSKGAAIRRAASMVDPREAEKAALMDEIGRRHARRTAVAPSFNTLSIAEKHQLREREFQEQREKRRAA 324 The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig1229.1437.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90) Total hits: 3
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-siliculosus-1a_F_contig1229.1437.1 >prot_E-siliculosus-1a_F_contig1229.1437.1 ID=prot_E-siliculosus-1a_F_contig1229.1437.1|Name=mRNA_E-siliculosus-1a_F_contig1229.1437.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=1071bp MASVAASPPPLKVLTDEGGGGQQQRRAGKRPRPPAAAMQVVVARRRNLDQback to top mRNA from alignment at E-siliculosus-1a_F_contig1229:6543..19597+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-siliculosus-1a_F_contig1229.1437.1 ID=mRNA_E-siliculosus-1a_F_contig1229.1437.1|Name=mRNA_E-siliculosus-1a_F_contig1229.1437.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=13055bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1229:6543..19597+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top Coding sequence (CDS) from alignment at E-siliculosus-1a_F_contig1229:6543..19597+ >mRNA_E-siliculosus-1a_F_contig1229.1437.1 ID=mRNA_E-siliculosus-1a_F_contig1229.1437.1|Name=mRNA_E-siliculosus-1a_F_contig1229.1437.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=6426bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1229:6543..19597+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top |