mRNA_E-siliculosus-1a_F_contig12253.1422.1 (mRNA) Ectocarpus siliculosus Ec863f_EcPH12_90f female
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Overview
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig12253.1422.1 vs. uniprot
Match: A0A6H5JYF8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JYF8_9PHAE) HSP 1 Score: 140 bits (354), Expect = 9.330e-39 Identity = 72/81 (88.89%), Postives = 78/81 (96.30%), Query Frame = 1
Query: 16 KGKSLKFSGAAGGKLEPGLSSFAASPKDAAEYMLPLLARASELVPRERHPTTKVLIKSTAGMRLLPFEAQEAIYDEVYAAL 258
+GKSLKFSG+AGGK++PGLSSFAASPKDAA YMLPLLA+ASELVPRERHPTTKVLIKSTAGMRLLP EAQE IYDE+YAAL
Sbjct: 21 EGKSLKFSGSAGGKIKPGLSSFAASPKDAAAYMLPLLAKASELVPRERHPTTKVLIKSTAGMRLLPLEAQEGIYDEIYAAL 101
BLAST of mRNA_E-siliculosus-1a_F_contig12253.1422.1 vs. uniprot
Match: D7FJZ4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJZ4_ECTSI) HSP 1 Score: 142 bits (357), Expect = 3.830e-38 Identity = 74/84 (88.10%), Postives = 79/84 (94.05%), Query Frame = 1
Query: 7 APSKGKSLKFSGAAGGKLEPGLSSFAASPKDAAEYMLPLLARASELVPRERHPTTKVLIKSTAGMRLLPFEAQEAIYDEVYAAL 258
A +G+SLKFSGAAGGK+EPGLSSFAASPKDAAEYMLPLLA+ASELVPRERHP TKVLIKSTAGMRLLP E QEAIYDEV+AAL
Sbjct: 2 AAQRGQSLKFSGAAGGKIEPGLSSFAASPKDAAEYMLPLLAKASELVPRERHPATKVLIKSTAGMRLLPLEVQEAIYDEVHAAL 85
BLAST of mRNA_E-siliculosus-1a_F_contig12253.1422.1 vs. uniprot
Match: A0A7S2BI47_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2BI47_9STRA) HSP 1 Score: 71.6 bits (174), Expect = 1.110e-12 Identity = 35/73 (47.95%), Postives = 50/73 (68.49%), Query Frame = 1
Query: 40 GAAGGKLEPGLSSFAASPKDAAEYMLPLLARASELVPRERHPTTKVLIKSTAGMRLLPFEAQEAIYDEVYAAL 258
G+ G K++PG+S F P D AEY+ PL A A+ L+P H TK+ +K+TAG+RLLP E Q ++D ++AAL
Sbjct: 66 GSKGLKVKPGVSKFNHKPNDIAEYLRPLFAHAASLIPEPYHHKTKIYLKATAGVRLLPIEEQTVMFDTLHAAL 138
BLAST of mRNA_E-siliculosus-1a_F_contig12253.1422.1 vs. uniprot
Match: E4WWZ1_OIKDI (Uncharacterized protein n=2 Tax=Oikopleura dioica TaxID=34765 RepID=E4WWZ1_OIKDI) HSP 1 Score: 63.9 bits (154), Expect = 5.660e-10 Identity = 32/68 (47.06%), Postives = 48/68 (70.59%), Query Frame = 1
Query: 55 KLEPGLSSFAASPKDAAEYMLPLLARASELVPRERHPTTKVLIKSTAGMRLLPFEAQEAIYDEVYAAL 258
K+EPGLSSFA P+D EY+ PL+ A +P E+H T + + +TAGMR++P EAQ++I E+ A++
Sbjct: 143 KVEPGLSSFADHPEDLEEYLRPLIDLAIAHIPEEQHHETVLYMLATAGMRMIPQEAQDSILSELRASI 210
BLAST of mRNA_E-siliculosus-1a_F_contig12253.1422.1 vs. uniprot
Match: R1C2E9_EMIHU (Uncharacterized protein n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=R1C2E9_EMIHU) HSP 1 Score: 63.5 bits (153), Expect = 7.450e-10 Identity = 33/69 (47.83%), Postives = 49/69 (71.01%), Query Frame = 1
Query: 55 KLEPGLSSFAASPKDAAE-YMLPLLARASELVPRERHPTTKVLIKSTAGMRLLPFEAQEAIYDEVYAAL 258
K++PGLSSF+ P++ Y+ LL A+ +VPR + KVL+++TAGMRL+P EA E IYD ++AA+
Sbjct: 68 KVKPGLSSFSDRPREVGSGYLTSLLDFAAGIVPRTKQARAKVLLRATAGMRLVPTEAAEVIYDSLFAAV 136
BLAST of mRNA_E-siliculosus-1a_F_contig12253.1422.1 vs. uniprot
Match: A0A5N5SNZ5_9CRUS (Uncharacterized protein n=1 Tax=Armadillidium nasatum TaxID=96803 RepID=A0A5N5SNZ5_9CRUS) HSP 1 Score: 62.8 bits (151), Expect = 1.440e-9 Identity = 33/74 (44.59%), Postives = 49/74 (66.22%), Query Frame = 1
Query: 25 SLKFSGAAGGKLEPGLSSFAASPKDAAEYMLPLLARASELVPRERHPTTKVLIKSTAGMRLLPFEAQEAIYDEV 246
SLK +++PGLSS+ P AE +LPLLA+A E +P++R P T +++K+TAG+RLLP E + + EV
Sbjct: 136 SLKLEDELWHEVKPGLSSYKDDPVKGAESLLPLLAKAKERIPKDRWPMTPLILKATAGLRLLPTEKADDLLKEV 209
BLAST of mRNA_E-siliculosus-1a_F_contig12253.1422.1 vs. uniprot
Match: A0A7S2GUT9_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Haptolina brevifila TaxID=156173 RepID=A0A7S2GUT9_9EUKA) HSP 1 Score: 61.6 bits (148), Expect = 2.110e-9 Identity = 33/69 (47.83%), Postives = 48/69 (69.57%), Query Frame = 1
Query: 55 KLEPGLSSFAASPKDAAE-YMLPLLARASELVPRERHPTTKVLIKSTAGMRLLPFEAQEAIYDEVYAAL 258
K++PGLSSFA P A+ Y+ PLL A+ +VP+ KVL+++TAGMRL+P AQ+ IYD ++ A+
Sbjct: 86 KVKPGLSSFAERPHTVADGYLRPLLDFAAHIVPQAEQARAKVLLRATAGMRLVPPAAQQQIYDALFEAV 154
BLAST of mRNA_E-siliculosus-1a_F_contig12253.1422.1 vs. uniprot
Match: UPI0018A711DD (ectonucleoside triphosphate diphosphohydrolase 5-like n=4 Tax=Penaeus TaxID=133894 RepID=UPI0018A711DD) HSP 1 Score: 62.0 bits (149), Expect = 2.720e-9 Identity = 33/79 (41.77%), Postives = 52/79 (65.82%), Query Frame = 1
Query: 22 KSLKFSGAAGGKLEPGLSSFAASPKDAAEYMLPLLARASELVPRERHPTTKVLIKSTAGMRLLPFEAQEAIYDEVYAAL 258
KSLK +++PGLSS+A +P++ A+ +LPLL A +P++ +T +++K+TAG+RLLP E EA+ EV L
Sbjct: 165 KSLKLDDELWHEIKPGLSSYADNPEEGAKSLLPLLELAKGRIPKQNWASTPIVLKATAGLRLLPEEKAEALLQEVKKVL 243
BLAST of mRNA_E-siliculosus-1a_F_contig12253.1422.1 vs. uniprot
Match: A0A3R7MBT3_PENVA (Uncharacterized protein n=1 Tax=Penaeus vannamei TaxID=6689 RepID=A0A3R7MBT3_PENVA) HSP 1 Score: 60.1 bits (144), Expect = 5.250e-9 Identity = 31/74 (41.89%), Postives = 50/74 (67.57%), Query Frame = 1
Query: 22 KSLKFSGAAGGKLEPGLSSFAASPKDAAEYMLPLLARASELVPRERHPTTKVLIKSTAGMRLLPFEAQEAIYDE 243
KSLK +++PGLSS+A +P++ A+ +LPLL A +P++ +T +++K+TAG+RLLP E EA+ E
Sbjct: 124 KSLKLDDELWHEIKPGLSSYADNPEEGAKSLLPLLELAKGRIPKQHWASTPIVLKATAGLRLLPEEKAEALLQE 197
BLAST of mRNA_E-siliculosus-1a_F_contig12253.1422.1 vs. uniprot
Match: UPI000C6DC23A (ectonucleoside triphosphate diphosphohydrolase 5-like isoform X1 n=3 Tax=Centruroides sculpturatus TaxID=218467 RepID=UPI000C6DC23A) HSP 1 Score: 60.8 bits (146), Expect = 6.810e-9 Identity = 30/64 (46.88%), Postives = 48/64 (75.00%), Query Frame = 1
Query: 55 KLEPGLSSFAASPKDAAEYMLPLLARASELVPRERHPTTKVLIKSTAGMRLLPFEAQEAIYDEV 246
++ PGLSS++ +P AAE ++PLL RA ++VP ++ T VL+K+TAG+RLLP ++ + I +EV
Sbjct: 99 EVRPGLSSYSENPHKAAESIVPLLERAIQIVPSDKWHKTPVLLKATAGLRLLPSDSADKILNEV 162 The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig12253.1422.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-siliculosus-1a_F_contig12253.1422.1 >prot_E-siliculosus-1a_F_contig12253.1422.1 ID=prot_E-siliculosus-1a_F_contig12253.1422.1|Name=mRNA_E-siliculosus-1a_F_contig12253.1422.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=86bp MHAPSKGKSLKFSGAAGGKLEPGLSSFAASPKDAAEYMLPLLARASELVPback to top mRNA from alignment at E-siliculosus-1a_F_contig12253:420..1316+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-siliculosus-1a_F_contig12253.1422.1 ID=mRNA_E-siliculosus-1a_F_contig12253.1422.1|Name=mRNA_E-siliculosus-1a_F_contig12253.1422.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=897bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig12253:420..1316+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top Coding sequence (CDS) from alignment at E-siliculosus-1a_F_contig12253:420..1316+ >mRNA_E-siliculosus-1a_F_contig12253.1422.1 ID=mRNA_E-siliculosus-1a_F_contig12253.1422.1|Name=mRNA_E-siliculosus-1a_F_contig12253.1422.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=516bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig12253:420..1316+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top |