mRNA_E-siliculosus-1a_F_contig1221.1398.1 (mRNA) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E-siliculosus-1a_F_contig1221.1398.1
Unique NamemRNA_E-siliculosus-1a_F_contig1221.1398.1
TypemRNA
OrganismEctocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig1221.1398.1 vs. uniprot
Match: D7G3J5_ECTSI (GDP-mannose 6-dehydrogenase n=6 Tax=Phaeophyceae TaxID=2870 RepID=D7G3J5_ECTSI)

HSP 1 Score: 619 bits (1596), Expect = 1.500e-216
Identity = 303/315 (96.19%), Postives = 309/315 (98.10%), Query Frame = 2
Query:   11 SGTKESIIQVGCGVVGGAYAKAYKHHGFEVRGFDVVPAIIEKMNEAGIPCCHPDNCPDDLNAEIVLLSVPTPLIKETQRLDMKYVWSTLPLVVKLIEQSTGSTPIFVIRSTVPPGMTKKWMAAVKEKTDKPFHVAFQPEFLRAVSCEEDARAPWQVVFGYMPGEEDVKARMTNAFLEFVGRDESKLTVLNIAEAEFMKLVHNYANGLKISFANCIYGLANELDPTIDAQKVLYLVSSTAECFLSRKYGLRVGAPYGGVCLPKDVPELTSLAPEGSVFREFLSGTGKINEWISSPEAKNMRVELDESPNWVSPDAL 955
            SG KESIIQVGCGVVGGAYAKAYKHHGFEVRGFDVVPAIIEKMN AGIPCCHPDNCP+DLN EIVLLSVPTPLIKETQRLDMKYVWST+PLVVKLIEQSTG  PIFVIRSTVPPGMTKKWMAAVKEKTDKPFHVAFQPEFLRAVSCEEDARAPWQVVFGYMPGEEDV+ARMTNAFLEFVGRDESKLTVLNIAEAEFMKLVHNYANGLKISFANCIYGLA+ELDP+IDAQKVLYLVSSTAECFLSRKYGLRVGAPYGGVCLPKDVPELTSLAPEGSVFREFLSGTGKINEWISS +AKNMRVELDESPNWVSPDAL
Sbjct:   14 SGKKESIIQVGCGVVGGAYAKAYKHHGFEVRGFDVVPAIIEKMNAAGIPCCHPDNCPNDLNPEIVLLSVPTPLIKETQRLDMKYVWSTVPLVVKLIEQSTGIAPIFVIRSTVPPGMTKKWMAAVKEKTDKPFHVAFQPEFLRAVSCEEDARAPWQVVFGYMPGEEDVRARMTNAFLEFVGRDESKLTVLNIAEAEFMKLVHNYANGLKISFANCIYGLAHELDPSIDAQKVLYLVSSTAECFLSRKYGLRVGAPYGGVCLPKDVPELTSLAPEGSVFREFLSGTGKINEWISSAKAKNMRVELDESPNWVSPDAL 328          
BLAST of mRNA_E-siliculosus-1a_F_contig1221.1398.1 vs. uniprot
Match: D7FM80_ECTSI (GDP-mannose 6-dehydrogenase n=3 Tax=Phaeophyceae TaxID=2870 RepID=D7FM80_ECTSI)

HSP 1 Score: 531 bits (1369), Expect = 1.900e-182
Identity = 257/312 (82.37%), Postives = 283/312 (90.71%), Query Frame = 2
Query:   20 KESIIQVGCGVVGGAYAKAYKHHGFEVRGFDVVPAIIEKMNEAGIPCCHPDNCPDDLNAEIVLLSVPTPLIKETQRLDMKYVWSTLPLVVKLIEQSTGSTPIFVIRSTVPPGMTKKWMAAVKEKTDKPFHVAFQPEFLRAVSCEEDARAPWQVVFGYMPGEEDVKARMTNAFLEFVGRDESKLTVLNIAEAEFMKLVHNYANGLKISFANCIYGLANELDPTIDAQKVLYLVSSTAECFLSRKYGLRVGAPYGGVCLPKDVPELTSLAPEGSVFREFLSGTGKINEWISSPEAKNMRVELDESPNWVSPDAL 955
            KE+++Q+GCGVVGGAYAKAY HHGF + GFDVVPAII+KMN+AG+ C HPD+CP DLNA+IVLLSVPTPLIKETQRLDMKYVWST+PLVVKLIEQS+G TPI VIRSTVPPG T KW A V+ KTDKPF VAFQPEFLRAVSCEEDARAPWQ+VFG     +D +ARM+N FL+FVGRDE+KLTVL IAEAEFMKLVHNYANGLKISFANCIYGLA+ELDP+IDAQKVLYLVSSTAECFLSRKYGLRVGAPYGGVCLPKDVPELTSLAPEGSVFREFLSGTGKINEWI++    +++VEL ESPNWVSP  L
Sbjct:    4 KENVVQIGCGVVGGAYAKAYVHHGFSLTGFDVVPAIIDKMNDAGVKCFHPDDCPSDLNADIVLLSVPTPLIKETQRLDMKYVWSTIPLVVKLIEQSSGLTPILVIRSTVPPGTTLKWEAEVRAKTDKPFQVAFQPEFLRAVSCEEDARAPWQIVFGCAKDADDTRARMSNCFLDFVGRDENKLTVLTIAEAEFMKLVHNYANGLKISFANCIYGLAHELDPSIDAQKVLYLVSSTAECFLSRKYGLRVGAPYGGVCLPKDVPELTSLAPEGSVFREFLSGTGKINEWITN--TPSLKVELTESPNWVSPSEL 313          
BLAST of mRNA_E-siliculosus-1a_F_contig1221.1398.1 vs. uniprot
Match: A0A6H5KTU6_9PHAE (UDPG_MGDP_dh domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KTU6_9PHAE)

HSP 1 Score: 388 bits (997), Expect = 1.420e-127
Identity = 199/288 (69.10%), Postives = 219/288 (76.04%), Query Frame = 2
Query:   92 FEVRGFDVVPAIIEKMNEAGIPCCHPDNCPDDLNAEIVLLSVPTPLIKETQRLDMKYVWSTLPLVVKLIEQSTGSTPIFVIRSTVPPGMTKKWMAAVKEKTDKPFHVAFQPEFLRAVSCEEDARAPWQVVFGYMPGEEDVKARMTNAFLEFVGRDESKLTVLNIAEAEFMKLVHNYANGLKISFANCIYGLANELDPTIDAQKVLYLVSSTAECFLSRKYGLRVGAPYGGVCLPKDVPELTSLAPEGSVFREFLSGTGKINEWISSPEAKNMRVELDESPNWVSPDAL 955
            + + GFDVVPAII+KMN+AG+ C HPD+CP DLNA+IVLLSVPTPLIKETQRLDMK                                                  VAFQPEFLRAVSCEEDARAPWQ+VFG     +D +ARM+N FL+FVGRDE+KLTVL IAEAEFMKLVHNYANGLKISFANCIYGLA+ELDP+IDAQKVLYLVSSTAECFLSRKYGLRVGAPYGGVCLPKDVPELTSLAPEGSVFREFLSGTGKINEWI++    +++VELDESPNWVSP  L
Sbjct:    4 YSLTGFDVVPAIIDKMNDAGVKCFHPDDCPSDLNADIVLLSVPTPLIKETQRLDMK--------------------------------------------------VAFQPEFLRAVSCEEDARAPWQIVFGCAKDADDTRARMSNCFLDFVGRDENKLTVLTIAEAEFMKLVHNYANGLKISFANCIYGLAHELDPSIDAQKVLYLVSSTAECFLSRKYGLRVGAPYGGVCLPKDVPELTSLAPEGSVFREFLSGTGKINEWITN--TPSLKVELDESPNWVSPSEL 239          
BLAST of mRNA_E-siliculosus-1a_F_contig1221.1398.1 vs. uniprot
Match: A0A814QHR5_9BILA (UDP-glucose 6-dehydrogenase n=4 Tax=Adineta steineri TaxID=433720 RepID=A0A814QHR5_9BILA)

HSP 1 Score: 157 bits (398), Expect = 2.380e-39
Identity = 102/303 (33.66%), Postives = 162/303 (53.47%), Query Frame = 2
Query:   23 ESIIQVGCGVVGGAYAKAYKHHGFEVRGFDVVPAIIEKMNEAGIPCCHPDNCP-----DDLNAEIVLLSVPTPLIKETQRLDMKYVWSTLPLVVKLIEQSTGSTPIFVI-RSTVPPGMTKKWMAAVKE-KTDKP--FHVAFQPEFLRAVSCEEDARAPWQVVFGYMPGEEDVKARMTNAFLEFV----GRDESKLTVLNIAE-AEFMKLVHNYANGLKISFANCIYGLAN----ELDPTIDAQKVLYLVSSTAECFLSRKYGLRVGAPYGGVCLPKDVPELTSLAPEGSVFREFLSGTGKINE 877
            ++II +GCG+VG A   +    G  + G D       +M      C  PD        +D+  +++L+++PTP    T  L  + +  ++ L+  LI++     P+ +I +STV  G ++K    +K   TD    +H+ + PEFLRA   + DA  P + +FG   G+  +        LE +    G   S +T+++ +E AEF+KLVHN++N ++ISF+NC   LA+    +LD  IDA +VL +VS TAE F + KYG++ G PY G CLPKD+    ++  E   +R+FL     INE
Sbjct:    2 KNIICIGCGIVGYATCLSLSSLGHSMVGIDTCMIARNRMINMNFSCFSPDEVMFEEKMNDILVDVILIALPTPFCSLTNTLSDESIMLSIGLISYLIKKKKDDNPVMIILQSTVSVGTSRKLFNGLKLFNTDDNCNYHLFYHPEFLRAEKSQYDALHPIKQIFGLTDGKPKMDLSYYENILEEIFSPIGSFRSSITMMSSSEEAEFLKLVHNFSNAMRISFSNCCAHLASLLSSKLDKEIDASRVLSVVSETAESFYNNKYGIKPGYPYSGACLPKDIQCFMNIT-EQYPYRQFLESVHLINE 303          
BLAST of mRNA_E-siliculosus-1a_F_contig1221.1398.1 vs. uniprot
Match: A0A3G4ZX75_9VIRU (GDP-mannose 6-dehydrogenase n=1 Tax=Edafosvirus sp. TaxID=2487765 RepID=A0A3G4ZX75_9VIRU)

HSP 1 Score: 150 bits (378), Expect = 1.900e-36
Identity = 92/302 (30.46%), Postives = 161/302 (53.31%), Query Frame = 2
Query:   20 KESIIQVGCGVVGGAYAKAYKHHGFEVRGFDVVPAIIEKMNEAGIPCCHPDNCPDDLNAEIVLLSVPTPLIKETQRLDMKYVWSTLPLVVKLIEQSTGSTPIFVIRSTVPPGMTKKWMAAVKEKTDKPFHVAFQPEFLRAVSCEEDARAPWQVVFGYMPGEEDVKARMTNAFLEFVGRDESKLTVLNIAEAEFMKLVHNYANGLKISFAN----CIYGLANELDPTIDAQKVLYLVSSTAECFLSRKYGLRVGAPYGGVCLPKDVPELTSLAPEGSVFREFLSGTGKINEWISSPEAKNMRV 913
            K  + Q+G GVVGG++  +YK  G +V G +    ++EK  +        D+     + + + LS+ TPL + TQ+L++KY++S++P V  +++ S  +  + V+RSTVPP  T  +   ++       +V FQPE+LRA S ++D+ AP  ++ G   G  DV + +   + +F+ R+  K+  + I EAE  KL HN  N  KIS+ N     +  +  E    I+A +V+  +++T E   +R+YGL+ G  +GG CLPKD+ +   L     +  +       +NE   + + + + V
Sbjct:   20 KFKVTQIGLGVVGGSFGLSYKKVGCDVVGIEASKELVEKFKKEFETYHISDDLSHVKDVDFIFLSINTPLDEATQKLNLKYLFSSIPNVCTIVKNSPKA--LVVVRSTVPPTTTNTYKKELEALCGFKVNVLFQPEYLRAYSAKKDSEAPLYIIIGRDEGT-DVSS-LIELYSKFIARE--KIEEMTIEEAELQKLFHNCFNATKISYFNQCKLLMDAVNKEHKSNINADRVIMSLANTCEGLWNRRYGLKSGHAFGGFCLPKDMKQAAYLEKIYGLKAQIFKSVNDVNEIYKATDREEILV 315          
BLAST of mRNA_E-siliculosus-1a_F_contig1221.1398.1 vs. uniprot
Match: A0A0G0IL69_9BACT (UDP-glucose 6-dehydrogenase n=1 Tax=Parcubacteria group bacterium GW2011_GWD2_38_11 TaxID=1618941 RepID=A0A0G0IL69_9BACT)

HSP 1 Score: 131 bits (330), Expect = 7.100e-30
Identity = 98/307 (31.92%), Postives = 150/307 (48.86%), Query Frame = 2
Query:   23 ESIIQVGCGVVGGAYAKAYKHHGFEVRGFDVVPAIIEKMNEAGIPCCHPDNCP--DDLNAEIVLLSVPTPLIKETQRLDMKYVWSTLPLVVKLIEQSTGSTPIFVIRSTVPPGMTKKWMAAVKEKTD-----KPFHVAFQPEFLRAVSCEEDARAPWQVVFGYMPGEEDVKARMTNAFLEFVGRDESKLTVLNIAEAEFMKLVHNYANGLKISFANCIYGLANELDPTIDAQKVLYLVSSTAECFLSRKYGLRVGAPYGGVCLPKDVPELTSLAPEGSVFR-EFLSGTGKINEWISSPEAKNMRVEL 919
            + I  +G G+VG A  K     G  V  +D  P II+ +   G    H +N    +    EI ++SVPTP   +  R+++ ++   L  + K I++ T   PIFV+RSTVPPG T+    +V EK       K F +   PEFLR VS E+D   PW VV G     +D  A +  A +  + +    +  +++ EAE MK  HN  N  KISF N +  + +++   +D++     V  +AE   + +YG +   PYGGVCLPKD     + A E + F    L GT   N+ +        ++ +
Sbjct:    7 KKIAIIGSGIVGQATGKGLARAGHNVLFYDKNPNIIKTLKNDGYHADHIENLSTVETDEIEIFMISVPTPT--KEGRVELSFLNEALTSLGKAIKE-TEKNPIFVVRSTVPPGTTENLAVSVLEKESGKKAGKDFGICMNPEFLREVSAEKDFMNPWMVVIGC----DDKSAGLALAKIYKIFK--CPIVHMSLKEAEMMKYAHNLLNATKISFFNEMRLVGDKMG--VDSEVFFPAVVKSAEAMWNPEYGTKNFGPYGGVCLPKDTEAFFTWALEVADFEMPVLKGTIATNKLMQESVTVEQQINV 302          
BLAST of mRNA_E-siliculosus-1a_F_contig1221.1398.1 vs. uniprot
Match: UPI0016710D30 (Uncharacterized protein n=2 Tax=Streptomyces fumigatiscleroticus TaxID=66371 RepID=UPI0016710D30)

HSP 1 Score: 129 bits (323), Expect = 2.660e-29
Identity = 98/303 (32.34%), Postives = 146/303 (48.18%), Query Frame = 2
Query:   29 IIQVGCGVVGGAYAKAYKHHGFEVRGFDVVPAIIEKMNEAGIPCCHPDNCPDDLNAEIVLLSVPTPLIKETQRLDMKYVWSTLPLVVKLIEQSTGSTPIFVIRSTVPPGMTKKWMAAVKEKTD-----KPFHVAFQPEFLRAVSCEEDARAPWQVVFGYMPGEEDVKA--RMTNAFLEFVGRDESKLTVLNIAEAEFMKLVHNYANGLKISFANCIYGLANELDPTIDAQKVLYLVSSTAECFLSRKYGLRVGAPYGGVCLPKDVPELTSLAPEGSVFREFLSGTGKINEWISSPEAKNMRVE 916
            I  VG GVVG A  K + H G EV   D++P  ++ +   G+      +  D+ ++  V L++PTP   E  R D+         V K +  ++G TP+ V+RSTVPPG T+  +  + EK       + F +A  PEFLRA S  ED   PW  V         V+   R++     F G      T  + A AE +K  HN  N  KISF N ++ ++  L   +D   +   V+ +AE   + +YG+R GAPYGGVCLPKD      LA    +    L    ++N+ ++   A + R +
Sbjct:    4 IFIVGSGVVGTATGKGFLHAGHEVTFIDILPRRLDYLRSQGLDARDTLDLEDEPDS-FVFLTLPTP--NEGHRYDLSAFEDGTAAVGKALATASG-TPVVVVRSTVPPGTTEGLVQPLLEKHSGKTLGEDFTLASNPEFLRAASAVEDFMHPWMTVIA----SRSVRTVERLSALLAPFGGELR---TFSDPAAAEMVKCAHNIFNATKISFWNEMWLVSQALG--LDLDPIAETVARSAEGSYNPRYGIRGGAPYGGVCLPKDTKGFLGLADSIGLDMPLLRAVVRVNDVLADRTAVDDRAD 293          
BLAST of mRNA_E-siliculosus-1a_F_contig1221.1398.1 vs. uniprot
Match: UPI00166F86CE (UDP-glucose/GDP-mannose dehydrogenase family protein n=1 Tax=Streptomyces ruber TaxID=83378 RepID=UPI00166F86CE)

HSP 1 Score: 127 bits (320), Expect = 7.130e-29
Identity = 103/316 (32.59%), Postives = 144/316 (45.57%), Query Frame = 2
Query:   29 IIQVGCGVVGGAYAKAYKHHGFEVRGFDVVPAIIEKMNEAGIPCCHP---DNCPDDLNAEIVLLSVPTPLIKETQRLDMKYVWSTLPLVVKLIEQSTGSTPIFVIRSTVPPGMTKKWMAAVKEKTD-----KPFHVAFQPEFLRAVSCEEDARAPWQVVFGYMPGEEDVKARMTNAFLEFVGRDESKLTVLNIAEAEFMKLVHNYANGLKISFANCIYGLANELDPTIDAQKVLYLVSSTAECFLSRKYGLRVGAPYGGVCLPKDVPELTSLAPEGSVFREFLSGTGKINEWISSPEAKNMRVELDESPNWVSPDA 952
            I  VG GVVG A  K + H G EV   D+    +E +   G+        DN PD      V L++PTP +    R D+         V K +  ++G T + V+RSTVPPG T+  +  + EK       + FH+A  PEFLRA S  ED + PW  V            R++     F G      T  + A AE +K  HN  N  KISF N ++ ++  L   +D   +   V+ +AE   +  YG+R GAPYGGVCLPKD      LA   S+    L    ++N+ ++   A      +      VSP A
Sbjct:    4 IFIVGSGVVGTATGKGFLHAGHEVTFIDIAHRRLEYLRSQGLDARDTLDLDNEPDSF----VFLTLPTPNVGH--RYDLSAFEDGTTTVGKALGTASG-THVVVVRSTVPPGTTEGLVQPLLEKHSGRTLGEDFHLASNPEFLRAASAVEDFKHPWMTVIASRSTR--TVERLSELLAPFGGELR---TFDDPAAAEMVKCAHNIFNATKISFWNEMWLVSQALG--LDLDPIAQTVARSAEGSYNPSYGIRGGAPYGGVCLPKDTQGFLGLADSISLEMPLLRAVVRVNDVLADRAAGGRSERVAGEKAAVSPAA 305          
BLAST of mRNA_E-siliculosus-1a_F_contig1221.1398.1 vs. uniprot
Match: A0A1M5XVU1_9ACTN (UDPglucose 6-dehydrogenase n=3 Tax=Streptomyces TaxID=1883 RepID=A0A1M5XVU1_9ACTN)

HSP 1 Score: 126 bits (317), Expect = 1.430e-28
Identity = 96/294 (32.65%), Postives = 137/294 (46.60%), Query Frame = 2
Query:   29 IIQVGCGVVGGAYAKAYKHHGFEVRGFDVVPAIIEKMNEAGIPCCHPDNCPDDLNAE---IVLLSVPTPLIKETQRLDMKYVWSTLPLVVKLIEQSTGSTPIFVIRSTVPPGMTKKWMAAVKEK-----TDKPFHVAFQPEFLRAVSCEEDARAPWQVVFGYMPGEEDVKARMTNAFLEFVGRDESKLTVLNIAEAEFMKLVHNYANGLKISFANCIYGLANELDPTIDAQKVLYLVSSTAECFLSRKYGLRVGAPYGGVCLPKDVPELTSLAPEGSVFREFLSGTGKINEWIS 886
            I  VG GVVG A  K + + G +V   DV    ++ +   G+          DL+AE    + L++PTP +    + D+    +    V K +  +TG TP+ V+RSTVPPG  +  +  + EK       + F +A  PEFLRA +  ED R PW  V          + R+      F G         N AEAEF+K  HN  N  KISF N ++ +   L   +D   +   V+ +AE   +  YG+R GAPYGGVCLPKD      LA    V    L     +N+ ++
Sbjct:    4 IFIVGSGVVGTATGKGFVNAGHQVTFIDVAQQRLDHLRSEGLDA----RADLDLSAEPDAFIFLTLPTPNVGH--QYDLSAFEAGTASVGKALADATG-TPVVVVRSTVPPGTAEGLVQPLLEKHSGKNVGEGFSLASNPEFLRAATAVEDFRHPWMTVIASRSVR--TRERLGELLAPFGGETR---VFSNPAEAEFVKCAHNIYNATKISFWNEMWLVGQHLG--LDLDPIAQTVARSAEASYNPHYGIRGGAPYGGVCLPKDTQGFLGLAASIGVDMPLLQAVVAVNDKLA 283          
BLAST of mRNA_E-siliculosus-1a_F_contig1221.1398.1 vs. uniprot
Match: A0A1Q9RRD6_9PSEU (UDP-glucose 6-dehydrogenase n=4 Tax=Pseudonocardia TaxID=1847 RepID=A0A1Q9RRD6_9PSEU)

HSP 1 Score: 125 bits (315), Expect = 5.250e-28
Identity = 97/292 (33.22%), Postives = 144/292 (49.32%), Query Frame = 2
Query:   29 IIQVGCGVVGGAYAKAYKHHGFEVRGFDVVPAIIEKMNEAGIPCCHPDNCPDDLNAEIVLLSVPTPLIKETQRLDMKYVWSTLPLVVKLIEQSTGSTPIFVIRSTVPPGMTKKWMAAVKEKT-----DKPFHVAFQPEFLRAVSCEEDARAPWQVVFGYMPGEEDVKARMTNAFLEFVGRDESKLTVLNIAEAEFMKLVHNYANGLKISFANCIYGLANELDPTIDAQKVLYLVSSTAECFLSRKYGLRVGAPYGGVCLPKDVPELTSLAPEGSVFREFLSGTGKINEWISS 889
            I  VG GVVG A    ++  G EV   D+  A + ++ E G       +  D+  + ++ L++PTP   E  R D+    +    V K +  S     + V+RSTVPPG T+  + +  E+      ++ F +A  PEFLRAVS  ED   PW  +      +   + R   A L   G +    T  N AEAEF+K  HN  N  KISF N ++ +A +LD  +D   +   V+ +AE  ++ +YG+R GAPYGGVCLPKD       A    V    LS   + N+ +++
Sbjct:    6 IFIVGSGVVGAATGGGFREAGHEVTFIDINEARVNELKERGWDARTAIDLTDEPES-LIFLTLPTP--HEGHRYDLTAFSAGTASVGKALAGSASRHTV-VVRSTVPPGTTEGLVKSTLEENSGMVANEGFGLASNPEFLRAVSAAEDFANPWMTIIASRDPQNVERLR---AILAPFGGELR--TFSNPAEAEFIKAAHNIYNATKISFWNEMWLVAQKLD--LDLDPIAATVARSAEGSINPEYGIRGGAPYGGVCLPKDTCGFLGFAAGIDVDMPLLSAVVETNDRLAA 286          
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig1221.1398.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G3J5_ECTSI1.500e-21696.19GDP-mannose 6-dehydrogenase n=6 Tax=Phaeophyceae T... [more]
D7FM80_ECTSI1.900e-18282.37GDP-mannose 6-dehydrogenase n=3 Tax=Phaeophyceae T... [more]
A0A6H5KTU6_9PHAE1.420e-12769.10UDPG_MGDP_dh domain-containing protein n=1 Tax=Ect... [more]
A0A814QHR5_9BILA2.380e-3933.66UDP-glucose 6-dehydrogenase n=4 Tax=Adineta steine... [more]
A0A3G4ZX75_9VIRU1.900e-3630.46GDP-mannose 6-dehydrogenase n=1 Tax=Edafosvirus sp... [more]
A0A0G0IL69_9BACT7.100e-3031.92UDP-glucose 6-dehydrogenase n=1 Tax=Parcubacteria ... [more]
UPI0016710D302.660e-2932.34Uncharacterized protein n=2 Tax=Streptomyces fumig... [more]
UPI00166F86CE7.130e-2932.59UDP-glucose/GDP-mannose dehydrogenase family prote... [more]
A0A1M5XVU1_9ACTN1.430e-2832.65UDPglucose 6-dehydrogenase n=3 Tax=Streptomyces Ta... [more]
A0A1Q9RRD6_9PSEU5.250e-2833.22UDP-glucose 6-dehydrogenase n=4 Tax=Pseudonocardia... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_F_contig1221contigE-siliculosus-1a_F_contig1221:1652..6175 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef902022-09-19
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female2021-02-24
Properties
Property NameValue
Start1
Stop1
Cds size957
Model size2249
Exons3
Ec32 orthologEc-19_004990.1
Ec32 ortholog descriptionUDP-glucose/GDP-mannose dehydrogenase, N-terminal
Hectar predicted targeting categoryother localisation
BRITEko00000,ko00001,ko00002,ko01000
Best eggNOG OGNA|NA|NA
Best tax levelActinobacteria
COG Functional cat.M
EC1.1.1.22
EggNOG OGs2IF5H@201174,COG1004@1,COG1004@2
EggNOG free text desc.UDP-glucose/GDP-mannose dehydrogenase family, central domain
KEGG ModuleM00014,M00129,M00361,M00362
KEGG Pathwayko00040,ko00053,ko00520,ko01100,map00040,map00053,map00520,map01100
KEGG ReactionR00286
KEGG koko:K00012
KEGG rclassRC00291
Seed eggNOG ortholog298653.Franean1_6677
Seed ortholog evalue2e-23
Seed ortholog score116.7
Taxonomic scopeBacteria
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_F_contig1221.1398.1prot_E-siliculosus-1a_F_contig1221.1398.1Ectocarpus siliculosus Ec863f_EcPH12_90f femalepolypeptideE-siliculosus-1a_F_contig1221 1659..4890 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927740.6008012-UTR-E-siliculosus-1a_F_contig1221:1651..16581622927740.6008012-UTR-E-siliculosus-1a_F_contig1221:1651..1658Ectocarpus siliculosus Ec863f_EcPH12_90f femaleUTRE-siliculosus-1a_F_contig1221 1652..1658 +
1696318662.2344205-UTR-E-siliculosus-1a_F_contig1221:1651..16581696318662.2344205-UTR-E-siliculosus-1a_F_contig1221:1651..1658Ectocarpus siliculosus Ec863f_EcPH12_90f femaleUTRE-siliculosus-1a_F_contig1221 1652..1658 +
1622927740.6731722-UTR-E-siliculosus-1a_F_contig1221:4890..61751622927740.6731722-UTR-E-siliculosus-1a_F_contig1221:4890..6175Ectocarpus siliculosus Ec863f_EcPH12_90f femaleUTRE-siliculosus-1a_F_contig1221 4891..6175 +
1696318662.2762873-UTR-E-siliculosus-1a_F_contig1221:4890..61751696318662.2762873-UTR-E-siliculosus-1a_F_contig1221:4890..6175Ectocarpus siliculosus Ec863f_EcPH12_90f femaleUTRE-siliculosus-1a_F_contig1221 4891..6175 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927740.6289825-CDS-E-siliculosus-1a_F_contig1221:1658..19931622927740.6289825-CDS-E-siliculosus-1a_F_contig1221:1658..1993Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1221 1659..1993 +
1696318662.2471228-CDS-E-siliculosus-1a_F_contig1221:1658..19931696318662.2471228-CDS-E-siliculosus-1a_F_contig1221:1658..1993Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1221 1659..1993 +
1622927740.6422465-CDS-E-siliculosus-1a_F_contig1221:2820..30931622927740.6422465-CDS-E-siliculosus-1a_F_contig1221:2820..3093Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1221 2821..3093 +
1696318662.255679-CDS-E-siliculosus-1a_F_contig1221:2820..30931696318662.255679-CDS-E-siliculosus-1a_F_contig1221:2820..3093Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1221 2821..3093 +
1622927740.6551864-CDS-E-siliculosus-1a_F_contig1221:4541..48901622927740.6551864-CDS-E-siliculosus-1a_F_contig1221:4541..4890Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1221 4542..4890 +
1696318662.265946-CDS-E-siliculosus-1a_F_contig1221:4541..48901696318662.265946-CDS-E-siliculosus-1a_F_contig1221:4541..4890Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1221 4542..4890 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E-siliculosus-1a_F_contig1221.1398.1

>prot_E-siliculosus-1a_F_contig1221.1398.1 ID=prot_E-siliculosus-1a_F_contig1221.1398.1|Name=mRNA_E-siliculosus-1a_F_contig1221.1398.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=319bp
MSGTKESIIQVGCGVVGGAYAKAYKHHGFEVRGFDVVPAIIEKMNEAGIP
CCHPDNCPDDLNAEIVLLSVPTPLIKETQRLDMKYVWSTLPLVVKLIEQS
TGSTPIFVIRSTVPPGMTKKWMAAVKEKTDKPFHVAFQPEFLRAVSCEED
ARAPWQVVFGYMPGEEDVKARMTNAFLEFVGRDESKLTVLNIAEAEFMKL
VHNYANGLKISFANCIYGLANELDPTIDAQKVLYLVSSTAECFLSRKYGL
RVGAPYGGVCLPKDVPELTSLAPEGSVFREFLSGTGKINEWISSPEAKNM
RVELDESPNWVSPDALTS*
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mRNA from alignment at E-siliculosus-1a_F_contig1221:1652..6175+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E-siliculosus-1a_F_contig1221.1398.1 ID=mRNA_E-siliculosus-1a_F_contig1221.1398.1|Name=mRNA_E-siliculosus-1a_F_contig1221.1398.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=4524bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1221:1652..6175+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
TCCAAACATGTCCGGAACCAAGGAGTCTATCATCCAGGTCGGGTGCGGTG TTGTCGGCGGGGCTTACGCCAAGGCGTACAAGCACCACGGCTTCGAGGTG CGGGGCTTCGATGTCGTGCCGGCCATCATCGAGAAGATGAACGAGGCTGG CATCCCCTGCTGCCACCCGGACAACTGCCCCGACGACCTTAACGCCGAGA TCGTCCTCCTGTCGGTGCCCACCCCCCTCATCAAGGAGACCCAGCGCCTC GACATGAAGTACGTCTGGTCCACCTTGCCCCTGGTGGTCAAGCTCATCGA GCAGTCGACGGGCAGCACCCCGATCTTCGTGATCCGATCCACGTGAGTTC TCAAATGTAAATTTGTTCTTTTTTTGGCACGGGCGGCGCTTGTCCGAAGG GCCATCGAGAGTGGCAGAGCCCCTGCTTTCTGCCACGGAGCCAAGACCAC AGGTAGCTTTATGCGTTGGTAGCAAGCGCAAGAGGTAGCTGTTGCTTTTG CGTCGTCTAGCCGTTGGGAGGTGCCTGAGCCTGTGGGGCGGAATCCTGGC CTACGTATGTGTGTTGTTTTCTTCTTTGTTCCACCTCCTGCTGTCGACGC TTCCGGATGTGTTGTTTGTTCTTAATAATGATCACCGCAAGCGGCAGCTT TGTGCCCTCCAATGTCCAGCCCTGCCCTCCAAGGCAACGTGCACGTCTGT AGCAATGCGATGCCCACGATCTAGTAGGGAGCACTGCTGTCCATGCCGCG CACTCGTCGGAAGCAGGCACGACTCTTTTTTTTGCTGCGCGGGAAACGTT TCCGAATTGAAACGAATCTACCGCCCTTGGTTTTCGGGCGAAGGTGCCCG AAGCGGATGTCGACTTTTCGCCTCCCCCGTACAACCGTTGCTATGCCCTC GATGGCCCAGAGCAGGCAGTATCATAGTTCACCAGCGCGTGCACCTGTTG CAGCAAAAGAAGGGATAGTCTGAGTAACATTTGGGGTCCAAAACTGGTTC CAAGAACAAACACGTCACTGGCCAGCAAGTAGTCATGGCGCGGCCATGGA TCACATGACGGTCTCAGTTAAAAAGCCCTCGACCTCGCTCTTGCAGCAAG ACCTCGATCCGATACCCTAACCCTCAACCCCCTGGCGCTGCTGCTCCGCC TTTCCCCCCCAAAATCCAGTGTGCCCCCCGGCATGACCAAGAAGTGGATG GCGGCCGTCAAGGAAAAGACCGACAAGCCGTTCCACGTGGCCTTCCAGCC GGAGTTCCTCCGCGCCGTCTCTTGCGAGGAGGACGCCCGGGCGCCATGGC AGGTGGTGTTCGGCTACATGCCCGGAGAGGAGGACGTGAAGGCCCGCATG ACCAACGCGTTCCTCGAGTTCGTCGGCCGCGACGAGTCCAAGCTCACCGT GCTCAACATCGCGGAGGCCGAGTTCATGAAGCTCGTGCACAAGTGAGTAG CAACAGCCATTTTTGATTCGGCTTCCTCTCCACACCCACCACACGTGTTC CTGCTGCGGTGCATTGACAGATAACCCATCTCCCTCCGCTCCGCCCCCCA GAGGTACAAGAGATAATGCCGTGTCTCTCCATCCACTACCAACCAAGAGA TGTAGGGATGTAGGGGTTGCTGATGTGACGTATTCTTCTCTCCCACCGGT ATTGTACGAAGACAAAAAAAACTTTTGTGGTGACGTCGAAGGGTCGCATT CGAAAATTTTGACAAAACCCTTGCAGCGGAGTTGACCGACATCAGTGGAT CCAGCGCCGCCTGCTGCAGGTACTACAACGATTCTTGGTATGGCCGGCCT GGATAAAAATGAAATCCCTCAGAGGCGTGTGGTTGTTCCCTCCTTACGAG GGAAGAACCGCTCGATCCTCTTGGTGGCCTGTCAAGGGCTGATGCCAAGC TGATGCGCTTTTCTAAAATACAGTGCATACGACAACGATGAAATGACGAA AGACGTTGGAGGTGGTGGTCCGCAAGACAAACCCGCACCAAGCGACATCT GTTCGGTGGTTCGGTTGAGTGTGGATTATTATCGCTCGTTCGTTTACACA CACAAGCGGCCCGTTTTGGCAAGCACGGCCTCTTGAAACCACTTGCGAGT GAAGCTGCACAGCCCTACCATTTTGTTGCTCATGCACTCTGAAGCTGCTG TTTAGTGCTGTTTGTGTTGCATTTTATTACTCCGCTCTTCAGGCACGGTA CTTTCATCCCGCCACCGCCAACCGGAGGGCAATCAATCGATCAAAGCAGC TGGCAACGGTAGCATTTTTTTTTTTTCAGAAATTACTGCATGTAGCAGGC GTTGATGCGATGTCGAAATGATGAATTCGTCTTCTCTGCTACAAGTAGTA CACATGTGTGCGTCTCTACAGCAGTCTACCGACCAGCCTGCCGTATATTT AGGTAGCCTTCATGTTGATGCACAAGGTTTGAGTTGCGATCCTTTCGATG CAGCCCGCCGGTCCGACTCTGGTTAGGCGTGCATTTTCGTTTGCAAAGTG GGACCCGTAAGACATCGCTGCGCGTTCCCTTAACCTCCACTCAACTAAAA ACAGAATTTGCGGATGGCACATCAATCATAGCGTGACCAAGTGCGCTTTC GAAATACACCCGCAGTAGTCTGCATTCCGCGATGGGAGCGCCCTCCCGAC ACCACAGCCTCTGCCCTTCTCCTTTTTACAAATCCAAGCTGAGATCTTTC AAGCCGCCAACATAACCAATCACGACCCAAGTCTTGTAGCCGTGCGTGTA CATGCCCTGTGTGTCATCTGTAGCACATGGGACGGGTCGACAATATTGTA CGGTTTGCAGTTAATGTTCGATTCCATCAACTCGTCTCACACTTAGTGTC CCGTCCCGTCTCCATCCCTCATCTGCCTCTTCCTGTACAGCTACGCGAAC GGGCTCAAGATCTCCTTCGCCAACTGCATCTACGGCCTCGCCAACGAGCT CGACCCCACGATCGACGCCCAGAAGGTGCTCTACCTGGTGTCCTCCACGG CGGAGTGCTTCCTCAGCCGCAAGTACGGCCTCCGCGTGGGCGCCCCGTAC GGCGGTGTGTGCCTGCCCAAGGACGTGCCGGAGCTCACCAGCCTCGCGCC AGAGGGCTCCGTGTTCAGGGAGTTCCTGTCGGGCACCGGCAAGATCAACG AGTGGATCTCGAGCCCTGAGGCCAAGAACATGCGGGTGGAGCTCGACGAG AGCCCCAACTGGGTGTCCCCCGACGCGCTCACCTCCTAATTTGTGACAGT TGGTTGGGATAGTGTTTGCCGTCGTGTGGGCATGGTTCTCTTTTGAGCGT GATTTGTAGTGTCGAAGGCGGAGATGGTGGAGCATAAACGCCACTCCCAT CAGTGACTGCCATCACACGTAATCGTTGTATGTTGTGGTGAGGAAGCGGA ACGTTTGTTGTCTGTTGGAGTGGCGGCATTAAGTGCTGCACCAACACCTC TCGGTTGGGGGTTTTCCCCTTTGGTCGTGAAGGATAGGTTCGACCCTCCG TCTTCCTTGTCGGCGGGTCGGTTTATTTTTTGCTCTTTTATGTCGTGGCG TTCTGAGCTGCCGCCCGAACAGCCGGCGAAATCAGAGCGCTGGACGCGGG CGTCCGTTCTCCTGACGAAAATCTGTGGGGTCTTGTGTGAGAGAAACTTT CCATTTCTTTTATTGTCTTTGTACTGCTGTTGTAGTGTCGTTGTCCTGTC TGTCTCCTTCTACACGTTTTCTGCACCTCGAATTGCGCTCTCTGTTCACT CCCGGCTTTGCTCCCGTGTGGAAGGCATTCCGCTTTCTGTTTCAGGGTGC GATTTGTGAAAAACCGCGTTTGATGCTGATCGTCGTTCATGGCTTTGGTG ATTTCTAGTGTTTTTTTTTTTTTATGAAAAAGGTTTGTAGTGCTTTGAGC GAGAGAATTAGCTGATCGGTGTTGATGAGAGGAAAGATCAGCCACCTTTT TATGTGGTTTTATCGGAACTCAACTTTTGAAAGGGTGTGGGATGTGAAAG GGGGCCGTGACGTGACGGCTTGCGTGGTGTGTCTTTCGTCCGGCCCTTGG GCCCCGTCATGGCGACAACCCGTCCTCCTGCGCACGTAACATGGCTCTCT CACCGTTTGTTGCAAGGGGGTGTCGGCTATGTAGTAGTAGCTGATGGCGT TTGGATCTCTCGGGGTTGACTGTAATATACGCTCTTGGTCCTTTTGTGAT TGAAGCGATTTCGAACAAGATTTTGTTGTTGAAAAAAAATGAATGAAGGG ATGGATGAAACGCTTTCATACCTTGGCACAACGACTGGCTGTGCACACTT TTTGATACCGTCAAGTGAGCCTTGAATTTTGCGTGACGAATATGCGGTGT AGGGTCCACTCTCCGTCGGCAAGAAAGAAAAAGGTGAAAGTACTCTTCTT TTCGTTGCGAATCCCACGTTGTGAGCACGCCCGAACGGTCGTGTAACCTG CATACACACACTGGTTCGTCATGTAGCCTCTCTTTGCGCATGCATGCCTG GTGGTGGTGGCGGTGAGAACGGAC
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Coding sequence (CDS) from alignment at E-siliculosus-1a_F_contig1221:1652..6175+

>mRNA_E-siliculosus-1a_F_contig1221.1398.1 ID=mRNA_E-siliculosus-1a_F_contig1221.1398.1|Name=mRNA_E-siliculosus-1a_F_contig1221.1398.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=1914bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1221:1652..6175+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
ATGTCCGGAACCAAGGAGTCTATCATCCAGGTCGGGTGCGGTGTTGTCGG
CGGGGCTTACGCCAAGGCGTACAAGCACCACGGCTTCGAGGTGCGGGGCT
TCGATGTCGTGCCGGCCATCATCGAGAAGATGAACGAGGCTGGCATCCCC
TGCTGCCACCCGGACAACTGCCCCGACGACCTTAACGCCGAGATCGTCCT
CCTGTCGGTGCCCACCCCCCTCATCAAGGAGACCCAGCGCCTCGACATGA
AGTACGTCTGGTCCACCTTGCCCCTGGTGGTCAAGCTCATCGAGCAGTCG
ACGGGCAGCACCCCGATCTTCGTGATCCGATCCACATGTCCGGAACCAAG
GAGTCTATCATCCAGGTCGGGTGCGGTGTTGTCGGCGGGGCTTACGCCAA
GGCGTACAAGCACCACGGCTTCGAGGTGCGGGGCTTCGATGTCGTGCCGG
CCATCATCGAGAAGATGAACGAGGCTGGCATCCCCTGCTGCCACCCGGAC
AACTGCCCCGACGACCTTAACGCCGAGATCGTCCTCCTGTCGGTGCCCAC
CCCCCTCATCAAGGAGACCCAGCGCCTCGACATGAAGTACGTCTGGTCCA
CCTTGCCCCTGGTGGTCAAGCTCATCGAGCAGTCGACGGGCAGCACCCCG
ATCTTCGTGATCCGATCCACTGTGCCCCCCGGCATGACCAAGAAGTGGAT
GGCGGCCGTCAAGGAAAAGACCGACAAGCCGTTCCACGTGGCCTTCCAGC
CGGAGTTCCTCCGCGCCGTCTCTTGCGAGGAGGACGCCCGGGCGCCATGG
CAGGTGGTGTTCGGCTACATGCCCGGAGAGGAGGACGTGAAGGCCCGCAT
GACCAACGCGTTCCTCGAGTTCGTCGGCCGCGACGAGTCCAAGCTCACCG
TGCTCAACATCGCGGAGGCCGAGTTCATGAAGCTCGTGCACAATGTGCCC
CCCGGCATGACCAAGAAGTGGATGGCGGCCGTCAAGGAAAAGACCGACAA
GCCGTTCCACGTGGCCTTCCAGCCGGAGTTCCTCCGCGCCGTCTCTTGCG
AGGAGGACGCCCGGGCGCCATGGCAGGTGGTGTTCGGCTACATGCCCGGA
GAGGAGGACGTGAAGGCCCGCATGACCAACGCGTTCCTCGAGTTCGTCGG
CCGCGACGAGTCCAAGCTCACCGTGCTCAACATCGCGGAGGCCGAGTTCA
TGAAGCTCGTGCACAACTACGCGAACGGGCTCAAGATCTCCTTCGCCAAC
TGCATCTACGGCCTCGCCAACGAGCTCGACCCCACGATCGACGCCCAGAA
GGTGCTCTACCTGGTGTCCTCCACGGCGGAGTGCTTCCTCAGCCGCAAGT
ACGGCCTCCGCGTGGGCGCCCCGTACGGCGGTGTGTGCCTGCCCAAGGAC
GTGCCGGAGCTCACCAGCCTCGCGCCAGAGGGCTCCGTGTTCAGGGAGTT
CCTGTCGGGCACCGGCAAGATCAACGAGTGGATCTCGAGCCCTGAGGCCA
AGAACATGCGGGTGGAGCTCGACGAGAGCCCCAACTGGGTGTCCCCCGAC
GCGCTCACCTCCTAACTACGCGAACGGGCTCAAGATCTCCTTCGCCAACT
GCATCTACGGCCTCGCCAACGAGCTCGACCCCACGATCGACGCCCAGAAG
GTGCTCTACCTGGTGTCCTCCACGGCGGAGTGCTTCCTCAGCCGCAAGTA
CGGCCTCCGCGTGGGCGCCCCGTACGGCGGTGTGTGCCTGCCCAAGGACG
TGCCGGAGCTCACCAGCCTCGCGCCAGAGGGCTCCGTGTTCAGGGAGTTC
CTGTCGGGCACCGGCAAGATCAACGAGTGGATCTCGAGCCCTGAGGCCAA
GAACATGCGGGTGGAGCTCGACGAGAGCCCCAACTGGGTGTCCCCCGACG
CGCTCACCTCCTAA
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