mRNA_E-siliculosus-1a_F_contig1220.1394.1 (mRNA) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E-siliculosus-1a_F_contig1220.1394.1
Unique NamemRNA_E-siliculosus-1a_F_contig1220.1394.1
TypemRNA
OrganismEctocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig1220.1394.1 vs. uniprot
Match: D8LIC9_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LIC9_ECTSI)

HSP 1 Score: 1085 bits (2806), Expect = 0.000e+0
Identity = 645/685 (94.16%), Postives = 650/685 (94.89%), Query Frame = 1
Query:  868 MDILRLLAGSPLSEEFRKPVVQLHPELAERYTVEVRRPIDLTTVARRVRRGTYDNSAGRLRRDIARIFTNCERFNMCSGQLFVGIARHLRALFESKWAESDLPYPGENQATSHRRRAALRTARYRLCWRAQLRGPXXXXXXXXXXXXXXXXXAAGGPGANGVSREFSEDILPMLSGEGEESNEEWTLGLFAERACLALGLRANQPPPVEEACPGGVGXXXXXXXXXXXXXAGEKAGRDACADWLFGPRQAAWLAAETAPAGEKRDPASAPPPVATAAVVSAAWRALDGALSPATVLVASNAARGTPFSSVWARPDKLVWAKQAKNTFWPAMLLWGSGTTAALKEVNMGRVPPAFREELEKQAKGTKGNNRNGAVVEFFGLHEFALLKPDALRPLSTLDESPNKTVSKNKRWDPTMEEARKAVVNLRDLETTMYMPQPEPAAGLNGFTMEPSSEELHQTGTPASDTDTSSGESTLESDTESNADLASPPTAECSSXXXXXXXXXXXXXXXXSCTAAVAGSASSVGGPHRDSLGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLNAXGGGKGRSGGLPAWRLALKRPLEELTPKERALEKVCRYLDKFGDIFSPQAQLKAAAEARDKDKAAMLGGRGHNNAPSAPAAAAVLGQTGLWGSLMGAPAKVEEETESTDGEDE 2922
            M+ILRLLAGSPLSEEFRKPVVQLHPELAERYTVEVRRPIDLTTVARRVRRGTYDNSAGRLRRDIARIFTNCERFNMCSGQLFVGIARHLRALFESKWAESDLPYPGE+QATSHRRRAALRTARYRLCWRAQLRGPXXXXXXXXXXXXXXXXXAAGGPGANGVSREFSEDILPMLSGEGEESNEEWTLGLFAERACLALGLRANQPP           XXXXXXXXXXXXX GEKAGRDACADWLFGPRQAAWLAAETAPAGEKRDPASAPPPVATAAVVSAAWRALDGALSPATVLVASNAARGTPFSSVWARPDKLVWAKQAKNTFWPAMLLWGSGTTAALKEVNMGRVPPAFREELEKQAKGTKGNNRNGAVVEFFGLHEFALLKPDALRPLSTLD+SPNKTVSKNKRWDPTMEEARKAVVNLRDLET+MYMPQPEPAAGLNG TMEPSSEELHQTGTPASDTDTSSGESTLESDTESNADLASPPTAECSS XXXXXXXXXXXX   SCTAAVAGSASSVGGPHRDSLG XXXXXXXXXXXXXXXXXXXXX               LNA GGGKGRSGGL AWRLALKRPLEELTPKERALEKVCRYLDKFGD+FSPQAQLKAAAEARDKDKAAMLGGRGHNNAPSAPAAAAVLGQTGLWGSLMGAPAKVEEETESTDGEDE
Sbjct:    1 MNILRLLAGSPLSEEFRKPVVQLHPELAERYTVEVRRPIDLTTVARRVRRGTYDNSAGRLRRDIARIFTNCERFNMCSGQLFVGIARHLRALFESKWAESDLPYPGESQATSHRRRAALRTARYRLCWRAQLRGPXXXXXXXXXXXXXXXXXAAGGPGANGVSREFSEDILPMLSGEGEESNEEWTLGLFAERACLALGLRANQPPXXXXXX---XXXXXXXXXXXXXXXXGEKAGRDACADWLFGPRQAAWLAAETAPAGEKRDPASAPPPVATAAVVSAAWRALDGALSPATVLVASNAARGTPFSSVWARPDKLVWAKQAKNTFWPAMLLWGSGTTAALKEVNMGRVPPAFREELEKQAKGTKGNNRNGAVVEFFGLHEFALLKPDALRPLSTLDKSPNKTVSKNKRWDPTMEEARKAVVNLRDLETSMYMPQPEPAAGLNGLTMEPSSEELHQTGTPASDTDTSSGESTLESDTESNADLASPPTAECSSSXXXXXXXXXXXXP--SCTAAVAGSASSVGGPHRDSLGGXXXXXXXXXXXXXXXXXXXXXLLLSTGVSHFEG---LNAAGGGKGRSGGLSAWRLALKRPLEELTPKERALEKVCRYLDKFGDMFSPQAQLKAAAEARDKDKAAMLGGRGHNNAPSAPAAAAVLGQTGLWGSLMGAPAKVEEETESTDGEDE 677          
BLAST of mRNA_E-siliculosus-1a_F_contig1220.1394.1 vs. uniprot
Match: A0A835ZC34_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZC34_9STRA)

HSP 1 Score: 178 bits (452), Expect = 9.860e-42
Identity = 143/423 (33.81%), Postives = 196/423 (46.34%), Query Frame = 1
Query:  874 ILRLLAGSPLSEEFRKPVVQLHPELAERYTVEVRRPIDLTTVARRVRRGTYDNSAGRLRRDIARIFTNCERFNMCSGQLFVGIARHLRALFESKWAESDLPYPGENQATSHRRRAALRTARYRLCWRAQLRGPXXXXXXXXXXXXXXXXXAAGGPGANGVSREFSEDILPMLSGEGEESNEEWTLGLFAERACLALGLRANQPPPVEEACPGGVGXXXXXXXXXXXXXAGEKAGRDACADWLFGPRQAAWLAAETAPAGEKRDPASAPPPVATAAVVSAAWRALDGALSPATVLVASNAARGTPFSSVWARPDKLVWAKQAKNTFWPAMLLWGSGTTAALKEVNMGRVPPAFREELEKQ--AKGTKGNNRNG---AVVEFFGLHEFALLKPDAL--RPLSTLDESPNKTVSKNKRWDPTMEEA 2121
            +L  +A +PL+ +F +PV +LHPE+A  Y   VRRP+DL+TVARR+RRG+Y + AG++ RDI+RIF NCERFN+ S +L++  ARHL+AL +  +AE+ L   GE  A +  R  A R  R+   W A L  P                  A    A                       +  T+G     A  ALGL    PP                            A   A A+W  G       A+  A  GE                   AW  +  AL+  T  +A   ARGT  SS+WARP  LVWAKQAKNTFWPAM+L  +     L  +N  R+P A    LE++  A+G   + ++     +VEF G HEF  L+ DA   RPLS    +P++   K + ++  + EA
Sbjct: 2260 LLCTVADNPLARDFLRPVKELHPEIAIAYARAVRRPMDLSTVARRLRRGSYPD-AGKVYRDISRIFRNCERFNVDS-RLYINTARHLQALIDGLFAETGLALSGETAAETAARATASRARRFAAVWHAALLPPF----------------TARVAAAXXXXXXXXXXXXXXXXXXXXXXQDGVTVGAAVLHARAALGL----PPXXXXXX---------------------HAQAAAEAEWAVG-------ASSVARDGE-------------------AWGDVVNALAQLTPELAEAVARGTEISSIWARPCALVWAKQAKNTFWPAMMLGRAAQGEQLTPINAARMPAAIFNMLEQRGPARGAPSSAQHADSHVIVEFLGTHEFGWLRDDAASARPLSDAAAAPHQKAPKKRAYEAALGEA 2613          
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig1220.1394.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LIC9_ECTSI0.000e+094.16Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A835ZC34_9STRA9.860e-4233.81Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_F_contig1220contigE-siliculosus-1a_F_contig1220:478..7374 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef902022-09-19
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female2021-02-24
Properties
Property NameValue
Start1
Stop0
Cds size2922
Model size2922
Exons8
Hectar predicted targeting categoryother localisation
BRITEko00000,ko03000
Best eggNOG OGNA|NA|NA
Best tax levelEukaryota
COG Functional cat.K
EggNOG OGs28IJ6@1,2QUXV@2759
EggNOG free text desc.positive regulation of cutin biosynthetic process
GOsGO:0000981,GO:0001101,GO:0003674,GO:0003700,GO:0006355,GO:0006357,GO:0006950,GO:0006970,GO:0008150,GO:0009414,GO:0009415,GO:0009628,GO:0009651,GO:0009719,GO:0009725,GO:0009737,GO:0009889,GO:0009891,GO:0009893,GO:0010029,GO:0010033,GO:0010035,GO:0010187,GO:0010468,GO:0010556,GO:0010557,GO:0010565,GO:0010604,GO:0019216,GO:0019217,GO:0019219,GO:0019222,GO:0031323,GO:0031325,GO:0031326,GO:0031328,GO:0033993,GO:0040008,GO:0042221,GO:0042304,GO:0045723,GO:0045834,GO:0045923,GO:0046889,GO:0046890,GO:0048518,GO:0048519,GO:0048522,GO:0048580,GO:0048581,GO:0050789,GO:0050793,GO:0050794,GO:0050896,GO:0051093,GO:0051171,GO:0051239,GO:0051241,GO:0051252,GO:0060255,GO:0062012,GO:0062013,GO:0065007,GO:0080090,GO:0097305,GO:0140110,GO:1900140,GO:1901700,GO:1901957,GO:1901959,GO:1903506,GO:2000026,GO:2000112,GO:2001141
KEGG koko:K09285
Seed eggNOG ortholog2880.D8LIC9
Seed ortholog evalue0.0
Seed ortholog score1091.6
Taxonomic scopeEukaryota
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_F_contig1220.1394.1prot_E-siliculosus-1a_F_contig1220.1394.1Ectocarpus siliculosus Ec863f_EcPH12_90f femalepolypeptideE-siliculosus-1a_F_contig1220 478..7374 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927739.8058343-CDS-E-siliculosus-1a_F_contig1220:477..6271622927739.8058343-CDS-E-siliculosus-1a_F_contig1220:477..627Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1220 478..627 -
1696318661.8550732-CDS-E-siliculosus-1a_F_contig1220:477..6271696318661.8550732-CDS-E-siliculosus-1a_F_contig1220:477..627Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1220 478..627 -
1622927739.8646858-CDS-E-siliculosus-1a_F_contig1220:800..10011622927739.8646858-CDS-E-siliculosus-1a_F_contig1220:800..1001Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1220 801..1001 -
1696318661.866615-CDS-E-siliculosus-1a_F_contig1220:800..10011696318661.866615-CDS-E-siliculosus-1a_F_contig1220:800..1001Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1220 801..1001 -
1622927740.0199308-CDS-E-siliculosus-1a_F_contig1220:1304..16461622927740.0199308-CDS-E-siliculosus-1a_F_contig1220:1304..1646Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1220 1305..1646 -
1696318661.876438-CDS-E-siliculosus-1a_F_contig1220:1304..16461696318661.876438-CDS-E-siliculosus-1a_F_contig1220:1304..1646Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1220 1305..1646 -
1622927740.0335548-CDS-E-siliculosus-1a_F_contig1220:2430..25801622927740.0335548-CDS-E-siliculosus-1a_F_contig1220:2430..2580Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1220 2431..2580 -
1696318661.8941712-CDS-E-siliculosus-1a_F_contig1220:2430..25801696318661.8941712-CDS-E-siliculosus-1a_F_contig1220:2430..2580Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1220 2431..2580 -
1622927740.0492725-CDS-E-siliculosus-1a_F_contig1220:3165..32941622927740.0492725-CDS-E-siliculosus-1a_F_contig1220:3165..3294Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1220 3166..3294 -
1696318661.9069295-CDS-E-siliculosus-1a_F_contig1220:3165..32941696318661.9069295-CDS-E-siliculosus-1a_F_contig1220:3165..3294Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1220 3166..3294 -
1622927740.0642807-CDS-E-siliculosus-1a_F_contig1220:3754..45671622927740.0642807-CDS-E-siliculosus-1a_F_contig1220:3754..4567Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1220 3755..4567 -
1696318661.918929-CDS-E-siliculosus-1a_F_contig1220:3754..45671696318661.918929-CDS-E-siliculosus-1a_F_contig1220:3754..4567Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1220 3755..4567 -
1622927740.0779266-CDS-E-siliculosus-1a_F_contig1220:4859..50511622927740.0779266-CDS-E-siliculosus-1a_F_contig1220:4859..5051Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1220 4860..5051 -
1696318661.930877-CDS-E-siliculosus-1a_F_contig1220:4859..50511696318661.930877-CDS-E-siliculosus-1a_F_contig1220:4859..5051Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1220 4860..5051 -
1622927740.0879688-CDS-E-siliculosus-1a_F_contig1220:6429..73741622927740.0879688-CDS-E-siliculosus-1a_F_contig1220:6429..7374Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1220 6430..7374 -
1696318661.9394825-CDS-E-siliculosus-1a_F_contig1220:6429..73741696318661.9394825-CDS-E-siliculosus-1a_F_contig1220:6429..7374Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1220 6430..7374 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E-siliculosus-1a_F_contig1220.1394.1

>prot_E-siliculosus-1a_F_contig1220.1394.1 ID=prot_E-siliculosus-1a_F_contig1220.1394.1|Name=mRNA_E-siliculosus-1a_F_contig1220.1394.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=974bp
MYASHFTAEPARGESTSEVSSMLPLSNAAAAAASGTATRAVPELDWARQQ
LQQQQQQQQQQQQQQSSWPAPSNLAGWRADGLASSNGPAAPAVATGSSSS
SSSAGPSRLPAAGHSSNACERALSPHVEMAAQQPTPPPRAPSPFSPIVSA
PPPAGGLTPSALEQGTATAGGGRGGAFADEASLNRSGAAAAAAPATYSSA
QQQQDVGGASTPPPRESKSPSVSPGAATSPGGSSSAPRTTPKKKPRLVKK
KRPKVGAAADGPVRRRRVVKVKKARPPEVGLGERGRERSMDILRLLAGSP
LSEEFRKPVVQLHPELAERYTVEVRRPIDLTTVARRVRRGTYDNSAGRLR
RDIARIFTNCERFNMCSGQLFVGIARHLRALFESKWAESDLPYPGENQAT
SHRRRAALRTARYRLCWRAQLRGPLREAARQAVRAASAAALAAGGPGANG
VSREFSEDILPMLSGEGEESNEEWTLGLFAERACLALGLRANQPPPVEEA
CPGGVGGAAAAAAAAAASAAGEKAGRDACADWLFGPRQAAWLAAETAPAG
EKRDPASAPPPVATAAVVSAAWRALDGALSPATVLVASNAARGTPFSSVW
ARPDKLVWAKQAKNTFWPAMLLWGSGTTAALKEVNMGRVPPAFREELEKQ
AKGTKGNNRNGAVVEFFGLHEFALLKPDALRPLSTLDESPNKTVSKNKRW
DPTMEEARKAVVNLRDLETTMYMPQPEPAAGLNGFTMEPSSEELHQTGTP
ASDTDTSSGESTLESDTESNADLASPPTAECSSSSCSSSSSSSSPFPAPS
CTAAVAGSASSVGGPHRDSLGGGGAPSSLTAMSPPPPPSRASPPPPPATA
ATAGGAGGLNAAGGGKGRSGGLPAWRLALKRPLEELTPKERALEKVCRYL
DKFGDIFSPQAQLKAAAEARDKDKAAMLGGRGHNNAPSAPAAAAVLGQTG
LWGSLMGAPAKVEEETESTDGEDE
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mRNA from alignment at E-siliculosus-1a_F_contig1220:478..7374-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E-siliculosus-1a_F_contig1220.1394.1 ID=mRNA_E-siliculosus-1a_F_contig1220.1394.1|Name=mRNA_E-siliculosus-1a_F_contig1220.1394.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=6897bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1220:478..7374- (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
ATGTACGCCTCACACTTTACCGCGGAGCCCGCGCGCGGCGAGTCAACCTC CGAGGTCTCGTCGATGCTCCCGCTTTCAAACGCTGCTGCTGCTGCTGCGT CTGGTACTGCTACTCGCGCAGTGCCCGAGTTGGACTGGGCACGCCAACAG CTGCAGCAGCAGCAGCAGCAGCAGCAACAACAACAACAACAACAATCCAG TTGGCCGGCTCCTTCGAACTTGGCCGGCTGGCGTGCCGACGGCCTGGCCT CGAGCAACGGGCCGGCGGCGCCTGCTGTCGCGACAGGCAGCAGCAGCAGC AGCAGCAGCGCGGGCCCATCCCGCCTCCCCGCTGCCGGACACTCCAGTAA CGCTTGCGAGCGGGCTCTGTCTCCCCACGTTGAAATGGCCGCTCAACAAC CCACGCCACCGCCACGAGCTCCATCACCCTTTTCTCCCATCGTGAGCGCG CCGCCGCCGGCGGGCGGGTTGACGCCCTCTGCCCTCGAACAGGGAACAGC AACAGCGGGAGGAGGAAGAGGAGGAGCTTTTGCGGACGAAGCTAGTTTGA ATCGTAGTGGCGCTGCTGCTGCTGCTGCTCCTGCGACGTACAGCAGCGCG CAGCAGCAGCAGGACGTGGGTGGTGCCTCCACTCCCCCGCCGCGCGAATC AAAATCTCCGAGCGTGTCGCCCGGGGCCGCGACTTCCCCCGGAGGGAGCA GCAGCGCACCTCGCACTACTCCCAAAAAGAAACCCAGGTTGGTAAAGAAG AAGAGACCAAAGGTGGGCGCGGCGGCGGATGGCCCGGTGAGGAGGAGGAG GGTGGTCAAGGTCAAGAAGGCCCGGCCGCCTGAGGTGGGGCTGGGAGAGA GGGGGCGAGAGCGGTCGATGGATATTTTGCGTCTTCTGGCTGGCAGCCCG CTCTCGGAGGAGTTTCGGAAGCCAGTGGTGCAGCTGCATCCCGAGGTGAG GACGCTGCTTACACGTGTGTTACCTAGTGTTCGCGTATGCTGCAGTACTT TTATTATATGCATAGTTATGTACTGCAGTGCATGTGTCTTACGGTGTGTA CTATATTTTGTGGGTATGATACATGGGCATCCCGTTCACTCGTGCGTTGG CGTTATCATCATGTGGTGTACATACGTGTGTATGTGCTCGAAGGAAGGAT GCCCCTCTCTGTACCCTTGGTCACGCACATGCATGCATGAGCAGCCAACA GCAGCAGTAGTAATAGTCGAAACAATCGTGTGCTTATAACTAAAACTTTG CGCCAAGAATAACACGATTTTGAATGCCTACAGTAGTCTACAGCAGTACT TCCCGCCCGACGGTCGCCCTCTCCCGAGCAGCACCTCAATGCAATTTGTT GCAAGCAGGAGGGTATGTCCAGGATTGCGTGTACGTTATTTTTGTTTCAG CACAACGTGGAAGGCGACGGTCGTGTAATTTTCCCCCTTGAACAAGGCGG TGAAGTGTGCAGGGGAGTCTGCGCTGATGTCTACTTTTGTACAGCAGTGT TGGATCTCACTTTAAAAGCTGCTCTGCTACAAACTCCATGTGTTGACCGG CGATGGTCGGTACCCTACCACTTCTGTACTACTCAGATGCTCACTCGATC CGAATCCTTGAACTTTTGGAGACCTGCTCTTTCGCCCAAGTGCGTGTGAC AAGCGTTTTCTGGGACCGGGTGGTTGAATCCCATCCCCCATTCGCCATCG AGCCCTGACCTGTCTGAATCCTTGGGTAGACAGTACTCATCCCCCCCGAA TAGTAGTTGTTTAGCCTGTAGCTCAAGGGTATTATTTACCGTGTGCGCTG TGGGTAACATGGCAGGAGGCGGAAGGAGCTGAATGCCTCGTCGATGGCTT GCGCGATCCCCAGTTTATGCATACGTGCACCAATAATCTCGAGTGGCCCA GATTCTTCTTGTCTTTCTCTCTGCATGCTATGGAGAGACAAGCGACGTAC AAACAATAACCCAAACCACACCCCATTTTTGTCCCGATTGTTTCTAGGAT CGGTGCATGACTTTTGCCAACAGCGAACGACGTGGCTGCCGCAGTAACGT ATGAGTACATCGTGCAGGTCGTTGTTTTATTTTTTTCACGGACCCTGTCA CATCGCCCCATCACGTCGCGGCTGCAGTCAGTTAACGACATCGGAAGCGA CTGACTGCTGTTGCTTGAGCCTCTAATCCAAGTCGCTAGGAATTATTTAC CAGCATGACCTCGACCTACCCCCCCCCAAAAAAAAAAAATGTCCTCTGTA CCGAGACCCTATCTCGAAACCCCCAACGCCACCCCGCTGACGAGAACTTC GTGTTTTCGTGTTTGCGACGCAGCTGGCGGAAAGATACACGGTGGAGGTG CGGCGTCCCATCGACCTCACCACGGTGGCTAGGCGAGTCAGGAGAGGCAC GTACGACAACTCCGCGGGCCGGCTGCGGCGCGACATCGCCCGCATCTTCA CCAACTGCGAGAGGTTCAACATGTGCAGTGGTCAGCTCTTCGTCGGCATC GCGCGCCATCTGAGGGTAAGGGAAGCGGGGGCCCGCGTTGTGGGGGTACG CATGCCTTGGCTGCCTTTTGGTCGCTTGCCCATTGGCCACCCTTTCATAG AAAGTGGTATGACAGATGGGACACACCAGGAAGAGCTTCGCATTGACACG CCTACATTTCTCGGGGCGACTGGGTCGGTCGCTCTCGCACCAGTGTCACA CAGGCCCGCCGTGCACCATCCTTCTTTTGTCAAAAGCTTGCTCGCTGAAC GAAACTATTACACTACCTGAAGTACATGCCCCGCCCGTCCTTGCACCCCC GCGCCAGGCGCTTTTCGAATCAAAGTGGGCGGAATCCGACCTGCCGTACC CTGGAGAGAACCAGGCCACCTCGCACCGCCGACGCGCCGCTCTCCGCACC GCCAGGTACCGCCTCTGCTGGCGGGCGCAGCTGCGGGGCCCCCTCCGCGA GGCCGCCCGGCAGGCGGTCCGGGCGGCGAGCGCGGCGGCTCTCGCTGCCG GCGGCCCTGGCGCGAACGGGGTGTCGCGGGAGTTCTCCGAGGATATATTG CCGATGCTCTCCGGGGAAGGGGAAGAGAGCAACGAGGAGTGGACCCTAGG GCTCTTCGCGGAGAGGGCGTGCCTGGCCCTGGGGTTGCGGGCGAACCAGC CCCCCCCGGTGGAGGAGGCGTGTCCGGGCGGCGTCGGCGGAGCAGCAGCA GCGGCAGCAGCCGCCGCTGCCTCCGCCGCCGGCGAGAAGGCCGGGCGCGA CGCCTGCGCGGACTGGCTGTTCGGCCCTCGGCAGGCCGCCTGGCTGGCGG CGGAGACGGCGCCCGCCGGAGAGAAGCGGGACCCGGCGTCGGCGCCGCCC CCCGTGGCGACCGCCGCGGTGGTGTCGGCGGCGTGGCGGGCCCTCGACGG CGCGCTCTCGCCGGCGACGGTGCTGGTGGCCTCCAACGCGGCGCGGGGCA CCCCGTTCTCGTCCGTGTGGGCGCGGCCGGACAAGCTCGTCTGGGCCAAG CAGGCGAAGAACACGTTCTGGCCGGCCATGCTGCTGTGGGGCAGCGGCAC CACGGCGGCCCTCAAGGAGGTGAACATGGGCAGGGTGCCCCCAGCGTTCC GGGAGGAGCTCGAGAAGCAGGTGTGTGTGTGTGTGTGTGTCGCTACTTTG TGTGTGTGTATATTCATAGGTAGTTCGGCACGACCGCCTTGACCAAACCG GGCGGCCAGCGAAATTTACGTCAGTGTCAGCGTGTAACAATCGAGATCCT CGCAGGAGGACCAAGGTTCTGTACGGGTGTCAGTGTGGGTGTGGGTGTGT GTGAATTTTTTTCTGGTGTACTGCGAACATGTATCACTGTCTTTTTTTTG CTGAATGACTCGGTCTCTGCCGTGTCCTCATCGCCCTTTTGCATGCGCTT CACGAGGACCTTCGATAGGCCTGATCGATCACAGGTCTTGCCCCAATCAC TCCCAAAATATGGATCCCATTTGGGCTGTGGTTATCGGTAGGTCCCGTCC AAGACCCCGGCCCACCCTCCCATATCTTCGGCTCACTATTCCCTCTTCTT TTCTTTTTTTCGCTGGTTGCGGCGCAACAGGCGAAAGGAACGAAGGGAAA CAACAGAAACGGCGCGGTGGTGGAGTTCTTCGGATTGCATGAGTTCGCCC TGCTGAAGCCGGACGCTCTGAGGCCACTCTCCACCCTCGACGAGAGCCCA AACAAAACGGTGCGTGCACCGTTATCCTCTTGGCCGGGATTACCCACCGG TACCCAAATCGTTAACCTAATGAGTCGACGCACGCCACCGGTGGCATGTT TGTCGTTGTAGACCTATTGAATCGACGCATGCCACCGGTTGTTTGTTTGT TGTTGGGACAAGTGAGGCACGCTGCGATGAAACCGCTACGACGTACCTGT GCTGAGAACACAGCATTTTTTTTTTTAGGGCCGCCCCCGGTTCGCGGAGG AAGAGCTGTTAGGATAGCATGCTCGAATTCCGGCATGCGAGCATGGGATT TTTCTTTCTCGCCACGGGCCTGCGGACACGTTGCGAGGGCGTGAGAATTC GGCGTGGGAGGAGGTTTGGCCATGCGCCGGCAGCTCCCGGTCGGGTGTTT TCGCATGCACCGCCCTGTGTGGCTGAAGAGGAGGCGTGGATGTACGTTCC CGCGCTCGTCAGTGTTCGTCATTATTTTTCATGCTATAATAGGCTGCTCT CGGTGTTGTCGTTCATGTTGCAATAGCATCAAAGATCATTTTCGTTGGTA TGTTCACCGCTCTCCCCTCTTCCCCCCGACCACGTGTCTGTCAGGTTTCG AAGAATAAGCGGTGGGACCCAACGATGGAGGAGGCTAGGAAGGCCGTGGT CAACCTGAGGGATCTCGAGACAACGATGTACATGCCGCAGCCGGAACCCG CGGCGGGACTGAACGGGTTCACGATGGAACCTTCGAGCGAAGAGGTGGGA ACGGTGTTCGGAATTGATGTTTCCTCAGCCATTGACCCGACCTCTCGGTT CTTTCGTCATGCCGTGGTAATGTTGGAACATGGCGCCTGCTCGCGTGAGT TCGAACCTTGGCGCAGCCACCCGAATTGATTTTTTTTTCTTCTCACGGTA TGCCTAGAACAAATGTGGCCGAAGTTGCAATGGTTCGTGTGTACGTAATT CGCGCTGAATACGCCTCGCCATTAATTTAAGGCAAGCCCCCAGAAGAAGA AATTGGCGGAGAAAATTGGAGGAACTCCTCTCCGGTGTGGCGTTCTCCTC TGTGACCTCGACCGATGCTTCCGACAAACCTATGGTTGTTGTTGTACATG CAGAAATGTATAGATAAAGGTGGGCGTCTAGAACATCCGGGATGCAACAC TCAACGCAGACAGAGGCATATTTGTGTTGCGGCGCTTGTCTTCTTCCTGT TGGTGGTACTACATGACCAGGCACAACAAGAAATCACGAGTACGTTTCCT CCCACATGACGCCGATCCTACACGCAGTGCATACTCTATCTGACCCCCCC CCCCCCCCCCCCCCCCCCCCCCCCCCCCACCCCCCCCCCCCCCCGCCCCC CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCGCCCCGCCCCCCCCCCCCC CCCCGTCCNNNNNNCCAGGCCCAACAAGAAATGACGCGGACCGTTCCTCC CCCCTGGCGCCGCGCCCACCCGCAGTGCATACTCTATCTGCCCCCCCCCC CCCCCCCCCCGCTCTTCACATATTAAAGCTCCACCAGACGGGGACACCGG CCTCCGACACCGATACCTCTAGCGGAGAGAGCACCCTCGAATCGGACACG GAGTCCAACGCGGATTTGGCGTCGCCCCCCACGGCGGAGTGCTCCTCCTC CTCCTGCTCTTCCTCCTCCTCGTCCTCCTCGCCCTTCCCCGCCCCTTCCT GTACGGCAGCCGTCGCGGGATCGGCGTCGTCGGTAGGGGGGCCGCACCGA GACTCCCTCGGCGGCGGGGGGGCTCCGTCTTCGCTGACGGCTATGTCTCC CCCGCCGCCCCCGTCCCGAGCATCGCCGCCGCCGCCGCCGGCGACGGCGG CGACGGCCGGTGGGGCCGGAGTCGGGGCTGGGACGACCGGGAGCAGTGCA CCTGGCGCCGCGGGCGGCGGCGGCGGCGGCGGCGGCGTGGCCGGCAAGCC CGTGGGGCCGGTGAAGCGCAAGCGGAAGCCGCTGACGGAGGAGCAGAAGC ACGCGCGGAAGATTAGAAGTAGAAAGCTGGTGCTGGAGAAGCAGCTGCTG CGGGAACAGCAGCGGCAGCAGCAGCAGCAACAGCAGCCCACGGGCCTCCC GGGGGCAGGGGGGGCAAATGCCGCCCCCACCGGGACCCCTCCGCTCCCCC CCAGCTTTGCGGCGAGCCGCGAGGGCTTGAACGCGGCGGGAGGGGGGAAA GGACGGAGCGGCGGTCTACCGGCGTGGAGGTTGGCCTTGAAACGGCCGCT GGAAGAGCTCACCCCGAAGGAAAGAGCCTTGGAGAAGGTCTGCAGGTACC TGGATAAGTTCGGGGACATATTCTCGCCGCAGGCGCAGCTCAAGGCAGCG GCGGAAGCTCGAGACAAAGACAAGGTAGGGAGGGCCGCTTGTCGTGGTGC CTTGGGAGAGGGTTATGGGGTGCGTGGTTTGTTAGTGGGTGCTCGCCTAC GCGTGTGCTTCGTCAGCGATTTTTTTTTTTGATCTGTTCATGGCGCTCGC CTTATCTTGCGTTTTCGTCATTTTTGTCTTGGCGTTCTTCGTCCCAGGCG GCTATGCTCGGCGGGAGAGGCCACAACAACGCCCCATCTGCACCTGCGGC GGCCGCGGTGCTGGGACAGACCGGGCTGTGGGGGAGCCTGATGGGCGCGC CGGCAAAGGTTGAGGAGGAGACGGAGAGCACGGACGGCGAAGATGAG
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Coding sequence (CDS) from alignment at E-siliculosus-1a_F_contig1220:478..7374-

>mRNA_E-siliculosus-1a_F_contig1220.1394.1 ID=mRNA_E-siliculosus-1a_F_contig1220.1394.1|Name=mRNA_E-siliculosus-1a_F_contig1220.1394.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=5844bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1220:478..7374- (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
ATGTACGCCTCACACTTTACCGCGGAGCCCGCGCGCGGCGAGTCAACCTC
CGAGGTCTCGTCGATGCTCCCGCTTTCAAACGCTGCTGCTGCTGCTGCGT
CTGGTACTGCTACTCGCGCAGTGCCCGAGTTGGACTGGGCACGCCAACAG
CTGCAGCAGCAGCAGCAGCAGCAGCAACAACAACAACAACAACAATCCAG
TTGGCCGGCTCCTTCGAACTTGGCCGGCTGGCGTGCCGACGGCCTGGCCT
CGAGCAACGGGCCGGCGGCGCCTGCTGTCGCGACAGGCAGCAGCAGCAGC
AGCAGCAGCGCGGGCCCATCCCGCCTCCCCGCTGCCGGACACTCCAGTAA
CGCTTGCGAGCGGGCTCTGTCTCCCCACGTTGAAATGGCCGCTCAACAAC
CCACGCCACCGCCACGAGCTCCATCACCCTTTTCTCCCATCGTGAGCGCG
CCGCCGCCGGCGGGCGGGTTGACGCCCTCTGCCCTCGAACAGGGAACAGC
AACAGCGGGAGGAGGAAGAGGAGGAGCTTTTGCGGACGAAGCTAGTTTGA
ATCGTAGTGGCGCTGCTGCTGCTGCTGCTCCTGCGACGTACAGCAGCGCG
CAGCAGCAGCAGGACGTGGGTGGTGCCTCCACTCCCCCGCCGCGCGAATC
AAAATCTCCGAGCGTGTCGCCCGGGGCCGCGACTTCCCCCGGAGGGAGCA
GCAGCGCACCTCGCACTACTCCCAAAAAGAAACCCAGGTTGGTAAAGAAG
AAGAGACCAAAGGTGGGCGCGGCGGCGGATGGCCCGGTGAGGAGGAGGAG
GGTGGTCAAGGTCAAGAAGGCCCGGCCGCCTGAGGTGGGGCTGGGAGAGA
GGGGGCGAGAGCGGTCGATGGATATTTTGCGTCTTCTGGCTGGCAGCCCG
CTCTCGGAGGAGTTTCGGAAGCCAGTGGTGCAGCTGCATCCCGAGATGTA
CGCCTCACACTTTACCGCGGAGCCCGCGCGCGGCGAGTCAACCTCCGAGG
TCTCGTCGATGCTCCCGCTTTCAAACGCTGCTGCTGCTGCTGCGTCTGGT
ACTGCTACTCGCGCAGTGCCCGAGTTGGACTGGGCACGCCAACAGCTGCA
GCAGCAGCAGCAGCAGCAGCAACAACAACAACAACAACAATCCAGTTGGC
CGGCTCCTTCGAACTTGGCCGGCTGGCGTGCCGACGGCCTGGCCTCGAGC
AACGGGCCGGCGGCGCCTGCTGTCGCGACAGGCAGCAGCAGCAGCAGCAG
CAGCGCGGGCCCATCCCGCCTCCCCGCTGCCGGACACTCCAGTAACGCTT
GCGAGCGGGCTCTGTCTCCCCACGTTGAAATGGCCGCTCAACAACCCACG
CCACCGCCACGAGCTCCATCACCCTTTTCTCCCATCGTGAGCGCGCCGCC
GCCGGCGGGCGGGTTGACGCCCTCTGCCCTCGAACAGGGAACAGCAACAG
CGGGAGGAGGAAGAGGAGGAGCTTTTGCGGACGAAGCTAGTTTGAATCGT
AGTGGCGCTGCTGCTGCTGCTGCTCCTGCGACGTACAGCAGCGCGCAGCA
GCAGCAGGACGTGGGTGGTGCCTCCACTCCCCCGCCGCGCGAATCAAAAT
CTCCGAGCGTGTCGCCCGGGGCCGCGACTTCCCCCGGAGGGAGCAGCAGC
GCACCTCGCACTACTCCCAAAAAGAAACCCAGGTTGGTAAAGAAGAAGAG
ACCAAAGGTGGGCGCGGCGGCGGATGGCCCGGTGAGGAGGAGGAGGGTGG
TCAAGGTCAAGAAGGCCCGGCCGCCTGAGGTGGGGCTGGGAGAGAGGGGG
CGAGAGCGGTCGATGGATATTTTGCGTCTTCTGGCTGGCAGCCCGCTCTC
GGAGGAGTTTCGGAAGCCAGTGGTGCAGCTGCATCCCGAGCTGGCGGAAA
GATACACGGTGGAGGTGCGGCGTCCCATCGACCTCACCACGGTGGCTAGG
CGAGTCAGGAGAGGCACGTACGACAACTCCGCGGGCCGGCTGCGGCGCGA
CATCGCCCGCATCTTCACCAACTGCGAGAGGTTCAACATGTGCAGTGGTC
AGCTCTTCGTCGGCATCGCGCGCCATCTGAGGCTGGCGGAAAGATACACG
GTGGAGGTGCGGCGTCCCATCGACCTCACCACGGTGGCTAGGCGAGTCAG
GAGAGGCACGTACGACAACTCCGCGGGCCGGCTGCGGCGCGACATCGCCC
GCATCTTCACCAACTGCGAGAGGTTCAACATGTGCAGTGGTCAGCTCTTC
GTCGGCATCGCGCGCCATCTGAGGGCGCTTTTCGAATCAAAGTGGGCGGA
ATCCGACCTGCCGTACCCTGGAGAGAACCAGGCCACCTCGCACCGCCGAC
GCGCCGCTCTCCGCACCGCCAGGTACCGCCTCTGCTGGCGGGCGCAGCTG
CGGGGCCCCCTCCGCGAGGCCGCCCGGCAGGCGGTCCGGGCGGCGAGCGC
GGCGGCTCTCGCTGCCGGCGGCCCTGGCGCGAACGGGGTGTCGCGGGAGT
TCTCCGAGGATATATTGCCGATGCTCTCCGGGGAAGGGGAAGAGAGCAAC
GAGGAGTGGACCCTAGGGCTCTTCGCGGAGAGGGCGTGCCTGGCCCTGGG
GTTGCGGGCGAACCAGCCCCCCCCGGTGGAGGAGGCGTGTCCGGGCGGCG
TCGGCGGAGCAGCAGCAGCGGCAGCAGCCGCCGCTGCCTCCGCCGCCGGC
GAGAAGGCCGGGCGCGACGCCTGCGCGGACTGGCTGTTCGGCCCTCGGCA
GGCCGCCTGGCTGGCGGCGGAGACGGCGCCCGCCGGAGAGAAGCGGGACC
CGGCGTCGGCGCCGCCCCCCGTGGCGACCGCCGCGGTGGTGTCGGCGGCG
TGGCGGGCCCTCGACGGCGCGCTCTCGCCGGCGACGGTGCTGGTGGCCTC
CAACGCGGCGCGGGGCACCCCGTTCTCGTCCGTGTGGGCGCGGCCGGACA
AGCTCGTCTGGGCCAAGCAGGCGAAGAACACGTTCTGGCCGGCCATGCTG
CTGTGGGGCAGCGGCACCACGGCGGCCCTCAAGGAGGTGAACATGGGCAG
GGTGCCCCCAGCGTTCCGGGAGGAGCTCGAGAAGCAGGCGCTTTTCGAAT
CAAAGTGGGCGGAATCCGACCTGCCGTACCCTGGAGAGAACCAGGCCACC
TCGCACCGCCGACGCGCCGCTCTCCGCACCGCCAGGTACCGCCTCTGCTG
GCGGGCGCAGCTGCGGGGCCCCCTCCGCGAGGCCGCCCGGCAGGCGGTCC
GGGCGGCGAGCGCGGCGGCTCTCGCTGCCGGCGGCCCTGGCGCGAACGGG
GTGTCGCGGGAGTTCTCCGAGGATATATTGCCGATGCTCTCCGGGGAAGG
GGAAGAGAGCAACGAGGAGTGGACCCTAGGGCTCTTCGCGGAGAGGGCGT
GCCTGGCCCTGGGGTTGCGGGCGAACCAGCCCCCCCCGGTGGAGGAGGCG
TGTCCGGGCGGCGTCGGCGGAGCAGCAGCAGCGGCAGCAGCCGCCGCTGC
CTCCGCCGCCGGCGAGAAGGCCGGGCGCGACGCCTGCGCGGACTGGCTGT
TCGGCCCTCGGCAGGCCGCCTGGCTGGCGGCGGAGACGGCGCCCGCCGGA
GAGAAGCGGGACCCGGCGTCGGCGCCGCCCCCCGTGGCGACCGCCGCGGT
GGTGTCGGCGGCGTGGCGGGCCCTCGACGGCGCGCTCTCGCCGGCGACGG
TGCTGGTGGCCTCCAACGCGGCGCGGGGCACCCCGTTCTCGTCCGTGTGG
GCGCGGCCGGACAAGCTCGTCTGGGCCAAGCAGGCGAAGAACACGTTCTG
GCCGGCCATGCTGCTGTGGGGCAGCGGCACCACGGCGGCCCTCAAGGAGG
TGAACATGGGCAGGGTGCCCCCAGCGTTCCGGGAGGAGCTCGAGAAGCAG
GCGAAAGGAACGAAGGGAAACAACAGAAACGGCGCGGTGGTGGAGTTCTT
CGGATTGCATGAGTTCGCCCTGCTGAAGCCGGACGCTCTGAGGCCACTCT
CCACCCTCGACGAGAGCCCAAACAAAACGGCGAAAGGAACGAAGGGAAAC
AACAGAAACGGCGCGGTGGTGGAGTTCTTCGGATTGCATGAGTTCGCCCT
GCTGAAGCCGGACGCTCTGAGGCCACTCTCCACCCTCGACGAGAGCCCAA
ACAAAACGGTTTCGAAGAATAAGCGGTGGGACCCAACGATGGAGGAGGCT
AGGAAGGCCGTGGTCAACCTGAGGGATCTCGAGACAACGATGTACATGCC
GCAGCCGGAACCCGCGGCGGGACTGAACGGGTTCACGATGGAACCTTCGA
GCGAAGAGGTTTCGAAGAATAAGCGGTGGGACCCAACGATGGAGGAGGCT
AGGAAGGCCGTGGTCAACCTGAGGGATCTCGAGACAACGATGTACATGCC
GCAGCCGGAACCCGCGGCGGGACTGAACGGGTTCACGATGGAACCTTCGA
GCGAAGAGCTCCACCAGACGGGGACACCGGCCTCCGACACCGATACCTCT
AGCGGAGAGAGCACCCTCGAATCGGACACGGAGTCCAACGCGGATTTGGC
GTCGCCCCCCACGGCGGAGTGCTCCTCCTCCTCCTGCTCTTCCTCCTCCT
CGTCCTCCTCGCCCTTCCCCGCCCCTTCCTGTACGGCAGCCGTCGCGGGA
TCGGCGTCGTCGGTAGGGGGGCCGCACCGAGACTCCCTCGGCGGCGGGGG
GGCTCCGTCTTCGCTGACGGCTATGTCTCCCCCGCCGCCCCCGTCCCGAG
CATCGCCGCCGCCGCCGCCGGCGACGGCGGCGACGGCCGGTGGGGCCGGA
CTCCACCAGACGGGGACACCGGCCTCCGACACCGATACCTCTAGCGGAGA
GAGCACCCTCGAATCGGACACGGAGTCCAACGCGGATTTGGCGTCGCCCC
CCACGGCGGAGTGCTCCTCCTCCTCCTGCTCTTCCTCCTCCTCGTCCTCC
TCGCCCTTCCCCGCCCCTTCCTGTACGGCAGCCGTCGCGGGATCGGCGTC
GTCGGTAGGGGGGCCGCACCGAGACTCCCTCGGCGGCGGGGGGGCTCCGT
CTTCGCTGACGGCTATGTCTCCCCCGCCGCCCCCGTCCCGAGCATCGCCG
CCGCCGCCGCCGGCGACGGCGGCGACGGCCGGTGGGGCCGGAGGCTTGAA
CGCGGCGGGAGGGGGGAAAGGACGGAGCGGCGGTCTACCGGCGTGGAGGT
TGGCCTTGAAACGGCCGCTGGAAGAGCTCACCCCGAAGGAAAGAGCCTTG
GAGAAGGTCTGCAGGTACCTGGATAAGTTCGGGGACATATTCTCGCCGCA
GGCGCAGCTCAAGGCAGCGGCGGAAGCTCGAGACAAAGACAAGGGCTTGA
ACGCGGCGGGAGGGGGGAAAGGACGGAGCGGCGGTCTACCGGCGTGGAGG
TTGGCCTTGAAACGGCCGCTGGAAGAGCTCACCCCGAAGGAAAGAGCCTT
GGAGAAGGTCTGCAGGTACCTGGATAAGTTCGGGGACATATTCTCGCCGC
AGGCGCAGCTCAAGGCAGCGGCGGAAGCTCGAGACAAAGACAAGGCGGCT
ATGCTCGGCGGGAGAGGCCACAACAACGCCCCATCTGCACCTGCGGCGGC
CGCGGTGCTGGGACAGACCGGGCTGTGGGGGAGCCTGATGGGCGCGCCGG
CAAAGGTTGAGGAGGAGACGGAGAGCACGGACGGCGAAGATGAGGCGGCT
ATGCTCGGCGGGAGAGGCCACAACAACGCCCCATCTGCACCTGCGGCGGC
CGCGGTGCTGGGACAGACCGGGCTGTGGGGGAGCCTGATGGGCGCGCCGG
CAAAGGTTGAGGAGGAGACGGAGAGCACGGACGGCGAAGATGAG
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