mRNA_E-siliculosus-1a_F_contig122.1392.1 (mRNA) Ectocarpus siliculosus Ec863f_EcPH12_90f female
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Overview
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig122.1392.1 vs. uniprot
Match: D8LNX5_ECTSI (Flagellar associated protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LNX5_ECTSI) HSP 1 Score: 414 bits (1063), Expect = 1.680e-131 Identity = 215/236 (91.10%), Postives = 219/236 (92.80%), Query Frame = 1
Query: 211 MEGLIPEAIRKMENLRSKHDVELGVAMALLYFHGKAKMVDREAVETLTAALTITEDMASDGGVLTAARFQWLKGDLEYARKLVTRVQGGDYSAQTPIQQQAFTLRGWIDASISQPCNKEEASLLKESIRQAAAALPYIRHNIEGSGQMRDLDTIMGKARYFATRLDGVDTAADHLSHAIALEPRYWPALIEKARLLAAVGDWEQAEDAISRVLAMDGDNLPALMLHALQGLTQAGQ 918
MEGLIPEAIRKMENLRSKHDVELGVAMALLYFHGKAKMVDREAVETLTA LTITEDMASDGGVLTAARFQWLKGDLEYAR+LVTRVQGGD+SAQTPIQQQAFTLRGWIDASISQP NKEEASLLKESI EGSGQMRDLDTIMGKARYFATRLDGVDTAADHLSHAIALEPR+WPAL+EKARLLAAVGDWEQAEDAISRVLAMD DNLPALMLHALQGLTQAGQ
Sbjct: 1 MEGLIPEAIRKMENLRSKHDVELGVAMALLYFHGKAKMVDREAVETLTATLTITEDMASDGGVLTAARFQWLKGDLEYARRLVTRVQGGDFSAQTPIQQQAFTLRGWIDASISQPRNKEEASLLKESISF-----------FEGSGQMRDLDTIMGKARYFATRLDGVDTAADHLSHAIALEPRFWPALVEKARLLAAVGDWEQAEDAISRVLAMDDDNLPALMLHALQGLTQAGQ 225
BLAST of mRNA_E-siliculosus-1a_F_contig122.1392.1 vs. uniprot
Match: A0A7S1C9H7_9STRA (Hypothetical protein (Fragment) n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1C9H7_9STRA) HSP 1 Score: 164 bits (414), Expect = 2.170e-42 Identity = 101/280 (36.07%), Postives = 156/280 (55.71%), Query Frame = 1
Query: 70 LKTDYKSLINYYLREGLYQHAADEASEQIQRRGNDTCLLYWEAFALGMEGLIPEAIRKMENLRSKHDVELGVAMALLYFHGKAKMVDREAVETLTAALTITEDMASDGGVLTAARFQWLKGDLEYARKLVTRVQGGDYSAQTPIQQQAFTLRGWIDASISQPCNKEEASLLKESIRQAAAALPYIRHNIEGSGQMRDLDTIMGKARYFATRLDGVDTAADHLSHAIALEPRYWPALIEKARLLAAVGDWEQAEDAISRVLAMDGDNLPALMLHALQGLTQ 909
+ D K+LIN+Y REG Y+H E I++RGND LL+W+AF + MEG EAIR +E +R+K DVEL VA+ALLY+H ++++ D V +L A + E+ AS+G +L AA F W G + AR L+ +V + S P A L+GW+D + S A + SI + AL R SG ++L+ + G ARY+ + + A + L + Y PAL +KA ++ + +W++A + ++VL+ D ++ AL L L LT+
Sbjct: 1 MSGDVKALINHYAREGFYRHIQTVCDEVIKKRGNDPTLLFWKAFGVAMEGGYTEAIRTIEAVRAKRDVELAVAVALLYYHNQSELPDLGEVGSLEAMIPAAEERASEGALLLAAAFCWHVGQTDRARSLLRKVLATN-SENAP----ALALQGWVDMTSS---TDTSADAVTNSIDKFERALAAGR-----SGPRKELEALTGAARYWEMKGE-FPKALEMLDLVTVMYSWYLPALSQKADIMTQMNEWDRAREFTNQVLSSDEFDIKALQLTVLYVLTR 266
BLAST of mRNA_E-siliculosus-1a_F_contig122.1392.1 vs. uniprot
Match: A0A6A5ABU8_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A6A5ABU8_9STRA) HSP 1 Score: 153 bits (386), Expect = 1.850e-38 Identity = 95/278 (34.17%), Postives = 142/278 (51.08%), Query Frame = 1
Query: 91 LINYYLREGLYQHAADEASEQIQRRGNDTCLLYWEAFALGMEGLIPEAIRKMENLRSKHDVELGVAMALLYFHGKAKMVDREAVETLTAALTITEDMASDGGVLTAARFQWLKGDLEYARKLVTRVQGGDYSAQTPIQQQAFTLRGWIDASISQPCNKEEASLLKESIRQAAAALPYIR--HNIEGSGQMRDLDTIMGKARYFATRLDGVDTAADHLSHAIALEPRYWPALIEKARLLAAVGDWEQAEDAISRVLAMDGDNLPALMLHALQGLTQAGQ 918
LINYY+R+G Y H + ++GND + +W F + MEG AIR++E+L+ K +VEL AL+Y H K K VD E + L + I E+ A D L +A F W + ARK++ + GG +A TP+Q +A LRGWID + ++P K + L S+ A Y ++I D + +MG A+YF + + + I + AL EKA +L G+W+Q D+ R LA D++ AL L L LT+ G+
Sbjct: 16 LINYYIRKGWYDHVQRLCEGILDKKGNDPVITFWRCFGIVMEGSNSSAIRELESLKKKKEVELPCIHALIYAHNKCKNVDHEEIAQLEMQVVIAEESAGDTAQLLSANFFWHIKEYPKARKILENLMGGRIAAATPVQVKATILRGWIDLT-AEPKTKRDLELRDNSLSFFADVKRYSPQLNSIIIRIDANDPEQLMGVAKYFDIKR-AYPKSLECYDEIIVKYTWFKEALSEKALVLLKTGEWDQCVDSAERALANSSDDIDALRLLILYLLTREGR 291
BLAST of mRNA_E-siliculosus-1a_F_contig122.1392.1 vs. uniprot
Match: A0A485KXP9_9STRA (Aste57867_12996 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KXP9_9STRA) HSP 1 Score: 154 bits (390), Expect = 2.000e-38 Identity = 93/280 (33.21%), Postives = 144/280 (51.43%), Query Frame = 1
Query: 79 DYKSLINYYLREGLYQHAADEASEQIQRRGNDTCLLYWEAFALGMEGLIPEAIRKMENLRSKHDVELGVAMALLYFHGKAKMVDREAVETLTAALTITEDMASDGGVLTAARFQWLKGDLEYARKLVTRVQGGDYSAQTPIQQQAFTLRGWIDASISQPCNKEEASLLKESIRQAAAALPYIRHNIEGSGQMRDLDTIMGKARYFATRLDGVDTAADHLSHAIALEPRYWPALIEKARLLAAVGDWEQAEDAISRVLAMDGDNLPALMLHALQGLTQAGQ 918
D + LINYY+R+G Y H E + ++GND + +W F + MEG AIR++E+L+ K +VEL AL+Y H K K VD E + L + I E+ A D L A F W + ARK++ + GG S +TPIQ +A LRGW+D + +P +K + L + SI + +++ D + ++G A+Y + + +H + + AL EKA +L G+W+Q ++ R LA D++ AL L L LT+ GQ
Sbjct: 2 DPRVLINYYIRKGWYDHVQRLCEEYLDKKGNDPVITFWRCFGIVMEGSNSSAIRELESLKKKKEVELPCIHALIYAHNKCKNVDHEEIGQLEMQVVIAEENAGDAAQLLCANFFWHIKEYAKARKILEALMGGRISPETPIQIKATILRGWVDLTC-EPKSKRDTELRENSI----SFFVEVKN-------ANDPEQLLGVAKYHDLKR-AYSKSLEHYDQLVVKYTWFKQALSEKALVLLKTGEWDQCVESAERALANSPDDIDALRLLILYLLTREGQ 268
BLAST of mRNA_E-siliculosus-1a_F_contig122.1392.1 vs. uniprot
Match: A0A1V9Z3U0_9STRA (Uncharacterized protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9Z3U0_9STRA) HSP 1 Score: 152 bits (383), Expect = 1.700e-37 Identity = 90/283 (31.80%), Postives = 151/283 (53.36%), Query Frame = 1
Query: 70 LKTDYKSLINYYLREGLYQHAADEASEQIQRRGNDTCLLYWEAFALGMEGLIPEAIRKMENLRSKHDVELGVAMALLYFHGKAKMVDREAVETLTAALTITEDMASDGGVLTAARFQWLKGDLEYARKLVTRVQGGDYSAQTPIQQQAFTLRGWIDASISQPCNKEEASLLKESIRQAAAALPYIRHNIEGSGQMRDLDTIMGKARYFATRLDGVDTAADHLSHAIALEPRYWPALIEKARLLAAVGDWEQAEDAISRVLAMDGDNLPALMLHALQGLTQAGQ 918
+ D ++LINYY R+G Y H + ++G+D +++W AFA+ MEG AIR++E+L+ + +VEL ALLY HG+ K VD + + L + I E+ A + L A F W + ARKL+ + GG ++ +TP+Q +A LRGW+D + ++ +K +A L +S+ A P ++ D + ++G ARY + + A + AI + +L EKA +L +G+W+Q ++ R L+ D++ AL L LT+ G+
Sbjct: 1 MSGDPRALINYYARKGWYDHVQRLCESILDKKGSDPVIMFWRAFAIAMEGSHSSAIRELESLKKRKEVELPCVHALLYTHGRCKHVDHDEIAQLELQVVIAEENAGESAQLLCANFFWHTKEPTKARKLLDALLGGRFAPETPVQIRAAILRGWVDLT-AEIKSKRDAELRDKSL--AYFEEPMVK-------AANDPEQLLGVARYHDLKKNHAK-ALESYDEAIVKYTWFKHSLSEKALVLLNMGEWDQCVESAERALSESSDDIEALRLLVFYQLTREGK 272
BLAST of mRNA_E-siliculosus-1a_F_contig122.1392.1 vs. uniprot
Match: W4H654_9STRA (Uncharacterized protein n=3 Tax=Aphanomyces astaci TaxID=112090 RepID=W4H654_9STRA) HSP 1 Score: 151 bits (381), Expect = 2.830e-37 Identity = 93/276 (33.70%), Postives = 142/276 (51.45%), Query Frame = 1
Query: 91 LINYYLREGLYQHAADEASEQIQRRGNDTCLLYWEAFALGMEGLIPEAIRKMENLRSKHDVELGVAMALLYFHGKAKMVDREAVETLTAALTITEDMASDGGVLTAARFQWLKGDLEYARKLVTRVQGGDYSAQTPIQQQAFTLRGWIDASISQPCNKEEASLLKESIRQAAAALPYIRHNIEGSGQMRDLDTIMGKARYFATRLDGVDTAADHLSHAIALEPRYWPALIEKARLLAAVGDWEQAEDAISRVLAMDGDNLPALMLHALQGLTQAGQ 918
LINYY+R+G Y H + ++GND + +W F + MEG AIR++E+L+ K +VEL AL+Y H K K VD E + L + I E+ A D L +A F W + ARK++ + GG +A TP+Q +A LRGWID + ++P K + L S+ A +++ + D + +MG A+YF + + + I + AL EKA +L G+W+Q D+ R LA D++ AL L L LT+ G+
Sbjct: 16 LINYYIRKGWYDHVQRLCEGILDKKGNDPVITFWRCFGIVMEGSNSSAIRELESLKKKKEVELPCIHALIYAHNKCKNVDHEEIAQLEMQVVIAEESAGDTAQLLSANFFWHIKEYPKARKILENLMGGRIAAATPVQVKATILRGWIDLT-AEPKTKRDLELRDNSLSFFA--------DVKSAN---DPEQLMGVAKYFDIKR-AYPKSLECYDEIIVKYTWFKEALSEKALVLLKTGEWDQCVDSAERALANSSDDIDALRLLILYLLTREGR 278
BLAST of mRNA_E-siliculosus-1a_F_contig122.1392.1 vs. uniprot
Match: W4H8T4_9STRA (Uncharacterized protein n=4 Tax=Aphanomyces TaxID=100860 RepID=W4H8T4_9STRA) HSP 1 Score: 151 bits (381), Expect = 3.150e-37 Identity = 93/276 (33.70%), Postives = 142/276 (51.45%), Query Frame = 1
Query: 91 LINYYLREGLYQHAADEASEQIQRRGNDTCLLYWEAFALGMEGLIPEAIRKMENLRSKHDVELGVAMALLYFHGKAKMVDREAVETLTAALTITEDMASDGGVLTAARFQWLKGDLEYARKLVTRVQGGDYSAQTPIQQQAFTLRGWIDASISQPCNKEEASLLKESIRQAAAALPYIRHNIEGSGQMRDLDTIMGKARYFATRLDGVDTAADHLSHAIALEPRYWPALIEKARLLAAVGDWEQAEDAISRVLAMDGDNLPALMLHALQGLTQAGQ 918
LINYY+R+G Y H + ++GND + +W F + MEG AIR++E+L+ K +VEL AL+Y H K K VD E + L + I E+ A D L +A F W + ARK++ + GG +A TP+Q +A LRGWID + ++P K + L S+ A +++ + D + +MG A+YF + + + I + AL EKA +L G+W+Q D+ R LA D++ AL L L LT+ G+
Sbjct: 16 LINYYIRKGWYDHVQRLCEGILDKKGNDPVITFWRCFGIVMEGSNSSAIRELESLKKKKEVELPCIHALIYAHNKCKNVDHEEIAQLEMQVVIAEESAGDTAQLLSANFFWHIKEYPKARKILENLMGGRIAAATPVQVKATILRGWIDLT-AEPKTKRDLELRDNSLSFFA--------DVKSAN---DPEQLMGVAKYFDIKR-AYPKSLECYDEIIVKYTWFKEALSEKALVLLKTGEWDQCVDSAERALANSSDDIDALRLLILYLLTREGR 278
BLAST of mRNA_E-siliculosus-1a_F_contig122.1392.1 vs. uniprot
Match: A0A1W0A8I9_9STRA (Uncharacterized protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1W0A8I9_9STRA) HSP 1 Score: 150 bits (379), Expect = 5.760e-37 Identity = 87/280 (31.07%), Postives = 146/280 (52.14%), Query Frame = 1
Query: 79 DYKSLINYYLREGLYQHAADEASEQIQRRGNDTCLLYWEAFALGMEGLIPEAIRKMENLRSKHDVELGVAMALLYFHGKAKMVDREAVETLTAALTITEDMASDGGVLTAARFQWLKGDLEYARKLVTRVQGGDYSAQTPIQQQAFTLRGWIDASISQPCNKEEASLLKESIRQAAAALPYIRHNIEGSGQMRDLDTIMGKARYFATRLDGVDTAADHLSHAIALEPRYWPALIEKARLLAAVGDWEQAEDAISRVLAMDGDNLPALMLHALQGLTQAGQ 918
D + LINYY+R+G + H + ++G+D +++W +F + MEG + AIR++E+L+SK +VEL AL+Y H K K +D + V L + I E+ ASD L A F W + ARK++ + GG + +TPIQ +A LRGW+D + ++P K + + SI+ + ++ D + ++G A+Y + A + I + +L EKA +L +G+W+Q D+ R L + ++ AL L L LT+ G+
Sbjct: 3 DPRVLINYYVRKGWFDHVQRHCESILDKKGSDPVIMFWRSFGIVMEGSLSSAIRELESLKSKREVELPCIHALIYTHNKCKNIDHDEVSQLELQVVIAEENASDASQLLCANFFWHIKETAKARKILENLMGGRLAPETPIQIRAAILRGWVDLT-TEPKTKRDTEYRENSIQF------FEEIKVKAVDSANDPEALLGVAKYHDMK-KSYKKALECYDEIIVKFTWFQQSLSEKALVLLKMGEWDQCVDSAERALTSNPADVEALRLLILYLLTREGK 274
BLAST of mRNA_E-siliculosus-1a_F_contig122.1392.1 vs. uniprot
Match: A0A6U5AVN5_HEMAN (Hypothetical protein n=2 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A6U5AVN5_HEMAN) HSP 1 Score: 149 bits (375), Expect = 1.960e-36 Identity = 94/272 (34.56%), Postives = 139/272 (51.10%), Query Frame = 1
Query: 88 SLINYYLREGLYQHAADEASEQIQRRGNDTCLLYWEAFALGMEGLIPEAIRKMENLRSKHDVELGVAMALLYFHGKAKMVDREAVETLTAALTITEDMASDGGVLTAARFQWLKGDLEYARKLVTRVQGGDYSAQTPIQQ---QAFTLRGWIDASISQPCNKEEASLLKESIRQAAAALPYIRHNIEGSGQMRDLDTIMGKARYFATRLDGVDTAADHLSHAIALEPRYWPALIEKARLLAAVGDWEQAEDAISRVLAMDGDNLPALMLHAL 894
SLI++Y R+G YQH AS+ + +R ND LL+W AFA+ +G +AIR++E LR K V+L V M L H K +DRE V +L + E+ D + AA L GD + R + +V IQ+ QA ++ GWI+ + ++ E RQA A P D+D ++G+ARY +D A + L+ + P + PAL EKAR+L A+GDW+QA DA +R L + +N+ +L L L
Sbjct: 14 SLIHFYARKGFYQHVHTAASQALTKRMNDPVLLFWRAFAILKQGRTSDAIRELEALRGKQGVQLPVLMCLKMAHTSGKHIDREEVASLEKGIFDEENAKRDSSLFLAATLCMLAGDNKKGRDYIGKV--------LQIQERYPQAHSMAGWIELTSGSDVKARKSM---EMFRQAVEANPA------------DVDAVLGRARYHEQVTKELDAAVEELNQCVVQFPWFTPALSEKARVLMALGDWDQAIDASNRSLTLTPNNIESLRLSVL 262
BLAST of mRNA_E-siliculosus-1a_F_contig122.1392.1 vs. uniprot
Match: A0A7S0S5T6_9CHLO (Hypothetical protein n=1 Tax=Chlamydomonas leiostraca TaxID=1034604 RepID=A0A7S0S5T6_9CHLO) HSP 1 Score: 147 bits (371), Expect = 6.690e-36 Identity = 94/275 (34.18%), Postives = 141/275 (51.27%), Query Frame = 1
Query: 91 LINYYLREGLYQHAADEASEQIQRRGNDTCLLYWEAFALGMEGLIPEAIRKMENLRSKHDVELGVAMALLYFHGKAKMVDREAVETLTAALTITEDMASDGGVLTAARFQWLKGDLEYARKLVTRVQGGDYSAQTPIQQQAFTLRGWIDASISQPCNKEEASLLKESIRQAAAALPYIRHNIEGSGQMRDLDTIMGKARYFATRLDGVDTAADHLSHAIALEPRYWPALIEKARLLAAVGDWEQAEDAISRVLAMDGDNLPALMLHALQGLTQAG 915
L+ YY REG + +E +++R ND L++W + + MEG EA+R++ + + D+EL A A+L H AK+VD++AV L L + E ASD L A F L E AR L RV P QA L GW+ + Q ++E +L+ +S + AAA + DL+ ++G+++ R + A + L+ + PAL+EKARLL AVGDWEQA D I +L++D N+ AL AL +T+ G
Sbjct: 8 LVRYYAREGYSRQLQTVCNEVLKKRANDPLLVFWRCYGMLMEGSSAEALRELRAVSAVPDLELAAAAAMLQAHESAKVVDQDAVMELQTKLEVEESTASDAAALHLASFYSLTKSKERARGLAERVL-----RMQPDNGQALVLLGWV--ILGQHADEEYGALVDDSELEEAAA----SFEAALAADPNDLEAMLGRSKVAEVR-HNLSGALEGLTEVAVRFSWFMPALVEKARLLLAVGDWEQANDTIHSILSVDPQNIMALAWQALHAITREG 270 The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig122.1392.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-siliculosus-1a_F_contig122.1392.1 >prot_E-siliculosus-1a_F_contig122.1392.1 ID=prot_E-siliculosus-1a_F_contig122.1392.1|Name=mRNA_E-siliculosus-1a_F_contig122.1392.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=307bp MYGAVRRDSSSSAGAGIGGGSSTLKTDYKSLINYYLREGLYQHAADEASEback to top mRNA from alignment at E-siliculosus-1a_F_contig122:62061..67334- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-siliculosus-1a_F_contig122.1392.1 ID=mRNA_E-siliculosus-1a_F_contig122.1392.1|Name=mRNA_E-siliculosus-1a_F_contig122.1392.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=5274bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig122:62061..67334- (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top Coding sequence (CDS) from alignment at E-siliculosus-1a_F_contig122:62061..67334- >mRNA_E-siliculosus-1a_F_contig122.1392.1 ID=mRNA_E-siliculosus-1a_F_contig122.1392.1|Name=mRNA_E-siliculosus-1a_F_contig122.1392.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=1842bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig122:62061..67334- (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top |