mRNA_E-siliculosus-1a_F_contig122.1392.1 (mRNA) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E-siliculosus-1a_F_contig122.1392.1
Unique NamemRNA_E-siliculosus-1a_F_contig122.1392.1
TypemRNA
OrganismEctocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig122.1392.1 vs. uniprot
Match: D8LNX5_ECTSI (Flagellar associated protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LNX5_ECTSI)

HSP 1 Score: 414 bits (1063), Expect = 1.680e-131
Identity = 215/236 (91.10%), Postives = 219/236 (92.80%), Query Frame = 1
Query:  211 MEGLIPEAIRKMENLRSKHDVELGVAMALLYFHGKAKMVDREAVETLTAALTITEDMASDGGVLTAARFQWLKGDLEYARKLVTRVQGGDYSAQTPIQQQAFTLRGWIDASISQPCNKEEASLLKESIRQAAAALPYIRHNIEGSGQMRDLDTIMGKARYFATRLDGVDTAADHLSHAIALEPRYWPALIEKARLLAAVGDWEQAEDAISRVLAMDGDNLPALMLHALQGLTQAGQ 918
            MEGLIPEAIRKMENLRSKHDVELGVAMALLYFHGKAKMVDREAVETLTA LTITEDMASDGGVLTAARFQWLKGDLEYAR+LVTRVQGGD+SAQTPIQQQAFTLRGWIDASISQP NKEEASLLKESI              EGSGQMRDLDTIMGKARYFATRLDGVDTAADHLSHAIALEPR+WPAL+EKARLLAAVGDWEQAEDAISRVLAMD DNLPALMLHALQGLTQAGQ
Sbjct:    1 MEGLIPEAIRKMENLRSKHDVELGVAMALLYFHGKAKMVDREAVETLTATLTITEDMASDGGVLTAARFQWLKGDLEYARRLVTRVQGGDFSAQTPIQQQAFTLRGWIDASISQPRNKEEASLLKESISF-----------FEGSGQMRDLDTIMGKARYFATRLDGVDTAADHLSHAIALEPRFWPALVEKARLLAAVGDWEQAEDAISRVLAMDDDNLPALMLHALQGLTQAGQ 225          
BLAST of mRNA_E-siliculosus-1a_F_contig122.1392.1 vs. uniprot
Match: A0A7S1C9H7_9STRA (Hypothetical protein (Fragment) n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1C9H7_9STRA)

HSP 1 Score: 164 bits (414), Expect = 2.170e-42
Identity = 101/280 (36.07%), Postives = 156/280 (55.71%), Query Frame = 1
Query:   70 LKTDYKSLINYYLREGLYQHAADEASEQIQRRGNDTCLLYWEAFALGMEGLIPEAIRKMENLRSKHDVELGVAMALLYFHGKAKMVDREAVETLTAALTITEDMASDGGVLTAARFQWLKGDLEYARKLVTRVQGGDYSAQTPIQQQAFTLRGWIDASISQPCNKEEASLLKESIRQAAAALPYIRHNIEGSGQMRDLDTIMGKARYFATRLDGVDTAADHLSHAIALEPRYWPALIEKARLLAAVGDWEQAEDAISRVLAMDGDNLPALMLHALQGLTQ 909
            +  D K+LIN+Y REG Y+H      E I++RGND  LL+W+AF + MEG   EAIR +E +R+K DVEL VA+ALLY+H ++++ D   V +L A +   E+ AS+G +L AA F W  G  + AR L+ +V   + S   P    A  L+GW+D + S       A  +  SI +   AL   R     SG  ++L+ + G ARY+  + +    A + L     +   Y PAL +KA ++  + +W++A +  ++VL+ D  ++ AL L  L  LT+
Sbjct:    1 MSGDVKALINHYAREGFYRHIQTVCDEVIKKRGNDPTLLFWKAFGVAMEGGYTEAIRTIEAVRAKRDVELAVAVALLYYHNQSELPDLGEVGSLEAMIPAAEERASEGALLLAAAFCWHVGQTDRARSLLRKVLATN-SENAP----ALALQGWVDMTSS---TDTSADAVTNSIDKFERALAAGR-----SGPRKELEALTGAARYWEMKGE-FPKALEMLDLVTVMYSWYLPALSQKADIMTQMNEWDRAREFTNQVLSSDEFDIKALQLTVLYVLTR 266          
BLAST of mRNA_E-siliculosus-1a_F_contig122.1392.1 vs. uniprot
Match: A0A6A5ABU8_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A6A5ABU8_9STRA)

HSP 1 Score: 153 bits (386), Expect = 1.850e-38
Identity = 95/278 (34.17%), Postives = 142/278 (51.08%), Query Frame = 1
Query:   91 LINYYLREGLYQHAADEASEQIQRRGNDTCLLYWEAFALGMEGLIPEAIRKMENLRSKHDVELGVAMALLYFHGKAKMVDREAVETLTAALTITEDMASDGGVLTAARFQWLKGDLEYARKLVTRVQGGDYSAQTPIQQQAFTLRGWIDASISQPCNKEEASLLKESIRQAAAALPYIR--HNIEGSGQMRDLDTIMGKARYFATRLDGVDTAADHLSHAIALEPRYWPALIEKARLLAAVGDWEQAEDAISRVLAMDGDNLPALMLHALQGLTQAGQ 918
            LINYY+R+G Y H        + ++GND  + +W  F + MEG    AIR++E+L+ K +VEL    AL+Y H K K VD E +  L   + I E+ A D   L +A F W   +   ARK++  + GG  +A TP+Q +A  LRGWID + ++P  K +  L   S+   A    Y    ++I       D + +MG A+YF  +      + +     I     +  AL EKA +L   G+W+Q  D+  R LA   D++ AL L  L  LT+ G+
Sbjct:   16 LINYYIRKGWYDHVQRLCEGILDKKGNDPVITFWRCFGIVMEGSNSSAIRELESLKKKKEVELPCIHALIYAHNKCKNVDHEEIAQLEMQVVIAEESAGDTAQLLSANFFWHIKEYPKARKILENLMGGRIAAATPVQVKATILRGWIDLT-AEPKTKRDLELRDNSLSFFADVKRYSPQLNSIIIRIDANDPEQLMGVAKYFDIKR-AYPKSLECYDEIIVKYTWFKEALSEKALVLLKTGEWDQCVDSAERALANSSDDIDALRLLILYLLTREGR 291          
BLAST of mRNA_E-siliculosus-1a_F_contig122.1392.1 vs. uniprot
Match: A0A485KXP9_9STRA (Aste57867_12996 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KXP9_9STRA)

HSP 1 Score: 154 bits (390), Expect = 2.000e-38
Identity = 93/280 (33.21%), Postives = 144/280 (51.43%), Query Frame = 1
Query:   79 DYKSLINYYLREGLYQHAADEASEQIQRRGNDTCLLYWEAFALGMEGLIPEAIRKMENLRSKHDVELGVAMALLYFHGKAKMVDREAVETLTAALTITEDMASDGGVLTAARFQWLKGDLEYARKLVTRVQGGDYSAQTPIQQQAFTLRGWIDASISQPCNKEEASLLKESIRQAAAALPYIRHNIEGSGQMRDLDTIMGKARYFATRLDGVDTAADHLSHAIALEPRYWPALIEKARLLAAVGDWEQAEDAISRVLAMDGDNLPALMLHALQGLTQAGQ 918
            D + LINYY+R+G Y H      E + ++GND  + +W  F + MEG    AIR++E+L+ K +VEL    AL+Y H K K VD E +  L   + I E+ A D   L  A F W   +   ARK++  + GG  S +TPIQ +A  LRGW+D +  +P +K +  L + SI    +    +++         D + ++G A+Y   +      + +H    +     +  AL EKA +L   G+W+Q  ++  R LA   D++ AL L  L  LT+ GQ
Sbjct:    2 DPRVLINYYIRKGWYDHVQRLCEEYLDKKGNDPVITFWRCFGIVMEGSNSSAIRELESLKKKKEVELPCIHALIYAHNKCKNVDHEEIGQLEMQVVIAEENAGDAAQLLCANFFWHIKEYAKARKILEALMGGRISPETPIQIKATILRGWVDLTC-EPKSKRDTELRENSI----SFFVEVKN-------ANDPEQLLGVAKYHDLKR-AYSKSLEHYDQLVVKYTWFKQALSEKALVLLKTGEWDQCVESAERALANSPDDIDALRLLILYLLTREGQ 268          
BLAST of mRNA_E-siliculosus-1a_F_contig122.1392.1 vs. uniprot
Match: A0A1V9Z3U0_9STRA (Uncharacterized protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9Z3U0_9STRA)

HSP 1 Score: 152 bits (383), Expect = 1.700e-37
Identity = 90/283 (31.80%), Postives = 151/283 (53.36%), Query Frame = 1
Query:   70 LKTDYKSLINYYLREGLYQHAADEASEQIQRRGNDTCLLYWEAFALGMEGLIPEAIRKMENLRSKHDVELGVAMALLYFHGKAKMVDREAVETLTAALTITEDMASDGGVLTAARFQWLKGDLEYARKLVTRVQGGDYSAQTPIQQQAFTLRGWIDASISQPCNKEEASLLKESIRQAAAALPYIRHNIEGSGQMRDLDTIMGKARYFATRLDGVDTAADHLSHAIALEPRYWPALIEKARLLAAVGDWEQAEDAISRVLAMDGDNLPALMLHALQGLTQAGQ 918
            +  D ++LINYY R+G Y H        + ++G+D  +++W AFA+ MEG    AIR++E+L+ + +VEL    ALLY HG+ K VD + +  L   + I E+ A +   L  A F W   +   ARKL+  + GG ++ +TP+Q +A  LRGW+D + ++  +K +A L  +S+  A    P ++          D + ++G ARY   + +    A +    AI     +  +L EKA +L  +G+W+Q  ++  R L+   D++ AL L     LT+ G+
Sbjct:    1 MSGDPRALINYYARKGWYDHVQRLCESILDKKGSDPVIMFWRAFAIAMEGSHSSAIRELESLKKRKEVELPCVHALLYTHGRCKHVDHDEIAQLELQVVIAEENAGESAQLLCANFFWHTKEPTKARKLLDALLGGRFAPETPVQIRAAILRGWVDLT-AEIKSKRDAELRDKSL--AYFEEPMVK-------AANDPEQLLGVARYHDLKKNHAK-ALESYDEAIVKYTWFKHSLSEKALVLLNMGEWDQCVESAERALSESSDDIEALRLLVFYQLTREGK 272          
BLAST of mRNA_E-siliculosus-1a_F_contig122.1392.1 vs. uniprot
Match: W4H654_9STRA (Uncharacterized protein n=3 Tax=Aphanomyces astaci TaxID=112090 RepID=W4H654_9STRA)

HSP 1 Score: 151 bits (381), Expect = 2.830e-37
Identity = 93/276 (33.70%), Postives = 142/276 (51.45%), Query Frame = 1
Query:   91 LINYYLREGLYQHAADEASEQIQRRGNDTCLLYWEAFALGMEGLIPEAIRKMENLRSKHDVELGVAMALLYFHGKAKMVDREAVETLTAALTITEDMASDGGVLTAARFQWLKGDLEYARKLVTRVQGGDYSAQTPIQQQAFTLRGWIDASISQPCNKEEASLLKESIRQAAAALPYIRHNIEGSGQMRDLDTIMGKARYFATRLDGVDTAADHLSHAIALEPRYWPALIEKARLLAAVGDWEQAEDAISRVLAMDGDNLPALMLHALQGLTQAGQ 918
            LINYY+R+G Y H        + ++GND  + +W  F + MEG    AIR++E+L+ K +VEL    AL+Y H K K VD E +  L   + I E+ A D   L +A F W   +   ARK++  + GG  +A TP+Q +A  LRGWID + ++P  K +  L   S+   A        +++ +    D + +MG A+YF  +      + +     I     +  AL EKA +L   G+W+Q  D+  R LA   D++ AL L  L  LT+ G+
Sbjct:   16 LINYYIRKGWYDHVQRLCEGILDKKGNDPVITFWRCFGIVMEGSNSSAIRELESLKKKKEVELPCIHALIYAHNKCKNVDHEEIAQLEMQVVIAEESAGDTAQLLSANFFWHIKEYPKARKILENLMGGRIAAATPVQVKATILRGWIDLT-AEPKTKRDLELRDNSLSFFA--------DVKSAN---DPEQLMGVAKYFDIKR-AYPKSLECYDEIIVKYTWFKEALSEKALVLLKTGEWDQCVDSAERALANSSDDIDALRLLILYLLTREGR 278          
BLAST of mRNA_E-siliculosus-1a_F_contig122.1392.1 vs. uniprot
Match: W4H8T4_9STRA (Uncharacterized protein n=4 Tax=Aphanomyces TaxID=100860 RepID=W4H8T4_9STRA)

HSP 1 Score: 151 bits (381), Expect = 3.150e-37
Identity = 93/276 (33.70%), Postives = 142/276 (51.45%), Query Frame = 1
Query:   91 LINYYLREGLYQHAADEASEQIQRRGNDTCLLYWEAFALGMEGLIPEAIRKMENLRSKHDVELGVAMALLYFHGKAKMVDREAVETLTAALTITEDMASDGGVLTAARFQWLKGDLEYARKLVTRVQGGDYSAQTPIQQQAFTLRGWIDASISQPCNKEEASLLKESIRQAAAALPYIRHNIEGSGQMRDLDTIMGKARYFATRLDGVDTAADHLSHAIALEPRYWPALIEKARLLAAVGDWEQAEDAISRVLAMDGDNLPALMLHALQGLTQAGQ 918
            LINYY+R+G Y H        + ++GND  + +W  F + MEG    AIR++E+L+ K +VEL    AL+Y H K K VD E +  L   + I E+ A D   L +A F W   +   ARK++  + GG  +A TP+Q +A  LRGWID + ++P  K +  L   S+   A        +++ +    D + +MG A+YF  +      + +     I     +  AL EKA +L   G+W+Q  D+  R LA   D++ AL L  L  LT+ G+
Sbjct:   16 LINYYIRKGWYDHVQRLCEGILDKKGNDPVITFWRCFGIVMEGSNSSAIRELESLKKKKEVELPCIHALIYAHNKCKNVDHEEIAQLEMQVVIAEESAGDTAQLLSANFFWHIKEYPKARKILENLMGGRIAAATPVQVKATILRGWIDLT-AEPKTKRDLELRDNSLSFFA--------DVKSAN---DPEQLMGVAKYFDIKR-AYPKSLECYDEIIVKYTWFKEALSEKALVLLKTGEWDQCVDSAERALANSSDDIDALRLLILYLLTREGR 278          
BLAST of mRNA_E-siliculosus-1a_F_contig122.1392.1 vs. uniprot
Match: A0A1W0A8I9_9STRA (Uncharacterized protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1W0A8I9_9STRA)

HSP 1 Score: 150 bits (379), Expect = 5.760e-37
Identity = 87/280 (31.07%), Postives = 146/280 (52.14%), Query Frame = 1
Query:   79 DYKSLINYYLREGLYQHAADEASEQIQRRGNDTCLLYWEAFALGMEGLIPEAIRKMENLRSKHDVELGVAMALLYFHGKAKMVDREAVETLTAALTITEDMASDGGVLTAARFQWLKGDLEYARKLVTRVQGGDYSAQTPIQQQAFTLRGWIDASISQPCNKEEASLLKESIRQAAAALPYIRHNIEGSGQMRDLDTIMGKARYFATRLDGVDTAADHLSHAIALEPRYWPALIEKARLLAAVGDWEQAEDAISRVLAMDGDNLPALMLHALQGLTQAGQ 918
            D + LINYY+R+G + H        + ++G+D  +++W +F + MEG +  AIR++E+L+SK +VEL    AL+Y H K K +D + V  L   + I E+ ASD   L  A F W   +   ARK++  + GG  + +TPIQ +A  LRGW+D + ++P  K +    + SI+       +    ++      D + ++G A+Y   +      A +     I     +  +L EKA +L  +G+W+Q  D+  R L  +  ++ AL L  L  LT+ G+
Sbjct:    3 DPRVLINYYVRKGWFDHVQRHCESILDKKGSDPVIMFWRSFGIVMEGSLSSAIRELESLKSKREVELPCIHALIYTHNKCKNIDHDEVSQLELQVVIAEENASDASQLLCANFFWHIKETAKARKILENLMGGRLAPETPIQIRAAILRGWVDLT-TEPKTKRDTEYRENSIQF------FEEIKVKAVDSANDPEALLGVAKYHDMK-KSYKKALECYDEIIVKFTWFQQSLSEKALVLLKMGEWDQCVDSAERALTSNPADVEALRLLILYLLTREGK 274          
BLAST of mRNA_E-siliculosus-1a_F_contig122.1392.1 vs. uniprot
Match: A0A6U5AVN5_HEMAN (Hypothetical protein n=2 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A6U5AVN5_HEMAN)

HSP 1 Score: 149 bits (375), Expect = 1.960e-36
Identity = 94/272 (34.56%), Postives = 139/272 (51.10%), Query Frame = 1
Query:   88 SLINYYLREGLYQHAADEASEQIQRRGNDTCLLYWEAFALGMEGLIPEAIRKMENLRSKHDVELGVAMALLYFHGKAKMVDREAVETLTAALTITEDMASDGGVLTAARFQWLKGDLEYARKLVTRVQGGDYSAQTPIQQ---QAFTLRGWIDASISQPCNKEEASLLKESIRQAAAALPYIRHNIEGSGQMRDLDTIMGKARYFATRLDGVDTAADHLSHAIALEPRYWPALIEKARLLAAVGDWEQAEDAISRVLAMDGDNLPALMLHAL 894
            SLI++Y R+G YQH    AS+ + +R ND  LL+W AFA+  +G   +AIR++E LR K  V+L V M L   H   K +DRE V +L   +   E+   D  +  AA    L GD +  R  + +V          IQ+   QA ++ GWI+ +        ++    E  RQA  A P             D+D ++G+ARY       +D A + L+  +   P + PAL EKAR+L A+GDW+QA DA +R L +  +N+ +L L  L
Sbjct:   14 SLIHFYARKGFYQHVHTAASQALTKRMNDPVLLFWRAFAILKQGRTSDAIRELEALRGKQGVQLPVLMCLKMAHTSGKHIDREEVASLEKGIFDEENAKRDSSLFLAATLCMLAGDNKKGRDYIGKV--------LQIQERYPQAHSMAGWIELTSGSDVKARKSM---EMFRQAVEANPA------------DVDAVLGRARYHEQVTKELDAAVEELNQCVVQFPWFTPALSEKARVLMALGDWDQAIDASNRSLTLTPNNIESLRLSVL 262          
BLAST of mRNA_E-siliculosus-1a_F_contig122.1392.1 vs. uniprot
Match: A0A7S0S5T6_9CHLO (Hypothetical protein n=1 Tax=Chlamydomonas leiostraca TaxID=1034604 RepID=A0A7S0S5T6_9CHLO)

HSP 1 Score: 147 bits (371), Expect = 6.690e-36
Identity = 94/275 (34.18%), Postives = 141/275 (51.27%), Query Frame = 1
Query:   91 LINYYLREGLYQHAADEASEQIQRRGNDTCLLYWEAFALGMEGLIPEAIRKMENLRSKHDVELGVAMALLYFHGKAKMVDREAVETLTAALTITEDMASDGGVLTAARFQWLKGDLEYARKLVTRVQGGDYSAQTPIQQQAFTLRGWIDASISQPCNKEEASLLKESIRQAAAALPYIRHNIEGSGQMRDLDTIMGKARYFATRLDGVDTAADHLSHAIALEPRYWPALIEKARLLAAVGDWEQAEDAISRVLAMDGDNLPALMLHALQGLTQAG 915
            L+ YY REG  +      +E +++R ND  L++W  + + MEG   EA+R++  + +  D+EL  A A+L  H  AK+VD++AV  L   L + E  ASD   L  A F  L    E AR L  RV         P   QA  L GW+   + Q  ++E  +L+ +S  + AAA          +    DL+ ++G+++    R   +  A + L+        + PAL+EKARLL AVGDWEQA D I  +L++D  N+ AL   AL  +T+ G
Sbjct:    8 LVRYYAREGYSRQLQTVCNEVLKKRANDPLLVFWRCYGMLMEGSSAEALRELRAVSAVPDLELAAAAAMLQAHESAKVVDQDAVMELQTKLEVEESTASDAAALHLASFYSLTKSKERARGLAERVL-----RMQPDNGQALVLLGWV--ILGQHADEEYGALVDDSELEEAAA----SFEAALAADPNDLEAMLGRSKVAEVR-HNLSGALEGLTEVAVRFSWFMPALVEKARLLLAVGDWEQANDTIHSILSVDPQNIMALAWQALHAITREG 270          
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig122.1392.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LNX5_ECTSI1.680e-13191.10Flagellar associated protein n=1 Tax=Ectocarpus si... [more]
A0A7S1C9H7_9STRA2.170e-4236.07Hypothetical protein (Fragment) n=1 Tax=Bicosoecid... [more]
A0A6A5ABU8_9STRA1.850e-3834.17Uncharacterized protein (Fragment) n=1 Tax=Aphanom... [more]
A0A485KXP9_9STRA2.000e-3833.21Aste57867_12996 protein n=1 Tax=Aphanomyces stella... [more]
A0A1V9Z3U0_9STRA1.700e-3731.80Uncharacterized protein n=1 Tax=Achlya hypogyna Ta... [more]
W4H654_9STRA2.830e-3733.70Uncharacterized protein n=3 Tax=Aphanomyces astaci... [more]
W4H8T4_9STRA3.150e-3733.70Uncharacterized protein n=4 Tax=Aphanomyces TaxID=... [more]
A0A1W0A8I9_9STRA5.760e-3731.07Uncharacterized protein n=1 Tax=Thraustotheca clav... [more]
A0A6U5AVN5_HEMAN1.960e-3634.56Hypothetical protein n=2 Tax=Hemiselmis andersenii... [more]
A0A7S0S5T6_9CHLO6.690e-3634.18Hypothetical protein n=1 Tax=Chlamydomonas leiostr... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_F_contig122contigE-siliculosus-1a_F_contig122:62061..67334 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef902022-09-19
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female2021-02-24
Properties
Property NameValue
Start1
Stop0
Cds size921
Model size922
Exons8
Hectar predicted targeting categoryother localisation
BRITEko00000,ko03036
Best eggNOG OGNA|NA|NA
Best tax levelEukaryota
COG Functional cat.S
EggNOG OGs28HZH@1,2QQAB@2759
EggNOG free text desc.intraciliary retrograde transport
GOsGO:0003002,GO:0005575,GO:0005623,GO:0005929,GO:0006355,GO:0006357,GO:0006810,GO:0006928,GO:0006996,GO:0007017,GO:0007018,GO:0007154,GO:0007165,GO:0007166,GO:0007224,GO:0007275,GO:0007389,GO:0007399,GO:0007417,GO:0007420,GO:0008104,GO:0008150,GO:0008589,GO:0009889,GO:0009953,GO:0009966,GO:0009987,GO:0010468,GO:0010556,GO:0010646,GO:0010970,GO:0016043,GO:0019219,GO:0019222,GO:0021591,GO:0021798,GO:0021871,GO:0022607,GO:0023051,GO:0023052,GO:0030030,GO:0030031,GO:0030705,GO:0030900,GO:0030990,GO:0030991,GO:0031323,GO:0031326,GO:0031503,GO:0032501,GO:0032502,GO:0032991,GO:0033036,GO:0033365,GO:0034613,GO:0035721,GO:0035735,GO:0042073,GO:0042995,GO:0043226,GO:0044085,GO:0044422,GO:0044441,GO:0044463,GO:0044464,GO:0044782,GO:0046907,GO:0048513,GO:0048583,GO:0048731,GO:0048856,GO:0050789,GO:0050794,GO:0050896,GO:0051171,GO:0051179,GO:0051234,GO:0051252,GO:0051641,GO:0051649,GO:0051716,GO:0060255,GO:0060271,GO:0060322,GO:0061512,GO:0065007,GO:0070727,GO:0070925,GO:0071840,GO:0080090,GO:0097542,GO:0099111,GO:0120025,GO:0120031,GO:0120036,GO:0120038,GO:1903506,GO:2000112,GO:2001141
KEGG koko:K19673
Preferred nameTTC21B
Seed eggNOG ortholog2880.D8LNX5
Seed ortholog evalue1.5e-113
Seed ortholog score416.0
Taxonomic scopeEukaryota
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_F_contig122.1392.1prot_E-siliculosus-1a_F_contig122.1392.1Ectocarpus siliculosus Ec863f_EcPH12_90f femalepolypeptideE-siliculosus-1a_F_contig122 62061..67334 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927738.2517264-CDS-E-siliculosus-1a_F_contig122:62060..621591622927738.2517264-CDS-E-siliculosus-1a_F_contig122:62060..62159Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig122 62061..62159 -
1696318661.6284838-CDS-E-siliculosus-1a_F_contig122:62060..621591696318661.6284838-CDS-E-siliculosus-1a_F_contig122:62060..62159Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig122 62061..62159 -
1622927738.2637665-CDS-E-siliculosus-1a_F_contig122:62458..625861622927738.2637665-CDS-E-siliculosus-1a_F_contig122:62458..62586Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig122 62459..62586 -
1696318661.6392996-CDS-E-siliculosus-1a_F_contig122:62458..625861696318661.6392996-CDS-E-siliculosus-1a_F_contig122:62458..62586Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig122 62459..62586 -
1622927738.275151-CDS-E-siliculosus-1a_F_contig122:63062..631171622927738.275151-CDS-E-siliculosus-1a_F_contig122:63062..63117Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig122 63063..63117 -
1696318661.6490126-CDS-E-siliculosus-1a_F_contig122:63062..631171696318661.6490126-CDS-E-siliculosus-1a_F_contig122:63062..63117Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig122 63063..63117 -
1622927738.291482-CDS-E-siliculosus-1a_F_contig122:63483..636921622927738.291482-CDS-E-siliculosus-1a_F_contig122:63483..63692Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig122 63484..63692 -
1696318661.6579874-CDS-E-siliculosus-1a_F_contig122:63483..636921696318661.6579874-CDS-E-siliculosus-1a_F_contig122:63483..63692Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig122 63484..63692 -
1622927738.3107061-CDS-E-siliculosus-1a_F_contig122:64107..642051622927738.3107061-CDS-E-siliculosus-1a_F_contig122:64107..64205Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig122 64108..64205 -
1696318661.6675448-CDS-E-siliculosus-1a_F_contig122:64107..642051696318661.6675448-CDS-E-siliculosus-1a_F_contig122:64107..64205Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig122 64108..64205 -
1622927738.329415-CDS-E-siliculosus-1a_F_contig122:65139..652751622927738.329415-CDS-E-siliculosus-1a_F_contig122:65139..65275Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig122 65140..65275 -
1696318661.677009-CDS-E-siliculosus-1a_F_contig122:65139..652751696318661.677009-CDS-E-siliculosus-1a_F_contig122:65139..65275Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig122 65140..65275 -
1622927738.3397892-CDS-E-siliculosus-1a_F_contig122:66648..667691622927738.3397892-CDS-E-siliculosus-1a_F_contig122:66648..66769Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig122 66649..66769 -
1696318661.687405-CDS-E-siliculosus-1a_F_contig122:66648..667691696318661.687405-CDS-E-siliculosus-1a_F_contig122:66648..66769Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig122 66649..66769 -
1622927738.3519201-CDS-E-siliculosus-1a_F_contig122:67259..673341622927738.3519201-CDS-E-siliculosus-1a_F_contig122:67259..67334Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig122 67260..67334 -
1696318661.69533-CDS-E-siliculosus-1a_F_contig122:67259..673341696318661.69533-CDS-E-siliculosus-1a_F_contig122:67259..67334Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig122 67260..67334 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E-siliculosus-1a_F_contig122.1392.1

>prot_E-siliculosus-1a_F_contig122.1392.1 ID=prot_E-siliculosus-1a_F_contig122.1392.1|Name=mRNA_E-siliculosus-1a_F_contig122.1392.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=307bp
MYGAVRRDSSSSAGAGIGGGSSTLKTDYKSLINYYLREGLYQHAADEASE
QIQRRGNDTCLLYWEAFALGMEGLIPEAIRKMENLRSKHDVELGVAMALL
YFHGKAKMVDREAVETLTAALTITEDMASDGGVLTAARFQWLKGDLEYAR
KLVTRVQGGDYSAQTPIQQQAFTLRGWIDASISQPCNKEEASLLKESIRQ
AAAALPYIRHNIEGSGQMRDLDTIMGKARYFATRLDGVDTAADHLSHAIA
LEPRYWPALIEKARLLAAVGDWEQAEDAISRVLAMDGDNLPALMLHALQG
LTQAGQA
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mRNA from alignment at E-siliculosus-1a_F_contig122:62061..67334-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E-siliculosus-1a_F_contig122.1392.1 ID=mRNA_E-siliculosus-1a_F_contig122.1392.1|Name=mRNA_E-siliculosus-1a_F_contig122.1392.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=5274bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig122:62061..67334- (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
ATGTACGGCGCCGTCAGGAGAGACAGCTCGAGCAGTGCCGGTGCCGGCAT CGGTGGCGGTAGCTCTACGTTGAAGGTCTGCCCTTTGCTGCTGACTTACA TGTAGAGCTTTGATGGGTGTAAGCAGAGGATCCCTCTGTTTGTCATCCCT CAGTGTCCTCTCTCCGTTACAAGTAGACGTTGGTGAGTAGATATCCTAAT ACCTCCCCGTGGATGCCGTCGACTACACACCTTGTTGCCGATGGCACTTA CGCGCTACTAATCTCGTAATGTTGAGACCGACATGGCCTATTTTGCAAGT ACGTCAGCTTGGATACAAGGAATAGTGGTGTTGGATTCGTCACCCAAAAG CAAGGGGCCAGCAATCAGCAAATCTACGAGCCCAATGCCGTACAATAAAC AGTGCGATACGGACTGCGGGCAGCACCATCGTACACCGCTCGAGACTACA GAATAGTCCTAGTGCTGTAGACTGGATGAGAGCCAACGGCGTCGCGCAGA TCCCAAGCGTTCTAGTTTTCATGTACAACAACCACTAACCGCACGTACGC TTTACGGCTTCCCAGACGGACTACAAAAGCCTCATCAACTATTACCTGAG GGAAGGGCTGTATCAACATGCCGCTGATGAGGCCAGTGAGCAGATACAGC GCCGGGGGAACGACACGTGTCTCCTCTACTGGGAAGGTAAAACCTTAACT TACTGATAGTCTGGTCTATACCGTATGCATTGAGCCGCTTTGCTTTGGGG TCGAGTTTTGCCAACTTCAAGACCTACGTTCATGGCGTGTACGATTGAAT ATTCGATATTACTGCTGTAGTCTAGTTGCAATGAGCGTGTGTCTGTTAGA AAGGCTTACCCATTAGACTACTCAGTCAGCGAGTTCAGCGCTGACTAAGT AGTCTAATGGGTAAGCATTTCTAACAGTGTCGCCCACTACAATCTGGCTG CATTAGAGTATCAGAATACACGTGTTCCGTGCATTGGACATTGTCAGAAC AAACGGTTGGGATTCACCTGTCAAAGCGTACAATATAATAGCTAGCCTTT AGAGTCAAATATTGGGTTCAAAATTCAGCAGCAGTTCCATAGACGAGATC AACATCACATACTCAACGGAATTGTACCGGGCAAGACACGCGTCCTTAAC GTATCTTGAACGTCCAAGGGTTAGTACGAAAAACGAAAGGGCACGGGATT CGGCAAGAAAATACTGTTCTTGGTGGGGTACTGGGTTCGACACAAACAAA GCACCCACATAAGACACCACCCCCCATTCACAACACAACACCCGACAGAA ATATTCACACGTTCCCGAAACATCAGAAGACTGCCAGATAAATGAAATAC GGCGCATGCAACCTCCCCACCACCACCCCCACATTCGGTAGCAATATGTG TTTATCCTGCCAGTATAACGAAAACACAAGAGACCGCCTTGCCCGGTGTC CGAAAGAGAGAGGGAGGGCGAGAGAGGTGGAGTAGAGCACCGAGCATATG TGCGTGTTTTCTGACGACGGTTGTTTGTTGTTTTGTTTCCCGTTAAGATA TAATATATTCCTGTGTGCCATTTTTTTCCAAAGATCGTTCGTCCGTCCGT CCGTTATGTGGGTGTGGTGGGTCAAGCGTGGACCGGAGTACACATGTGTA TCGTGTAAACTCGTTCATCCACCACACACAATCAATGGATGCTTTTGGTG AATGAAATGTGCTAAATGCGTTCGTCCAGGGCACGAATGAATATGTATCC GTGCGGTCGGTGGTTCCCGTGAATGACTGAGGTGATGTCATCAATTCGTC CAATCAGCCACTCACGACGAACTTGAATTTTTTTAATCTTTTCAGGAAGT GACATCATGACCGTGGCTGACGTCATCCGTCCACCATGGAATCTTCGACC AAAGGAAATTTCCTTAAAAAAACAATTGGCCAATCAGAATACTGTGCACA CCTTTTCTCTCTCTCTCTGGTAATTCTCACATGTGTTTCCTCGTGTTGTA TTCGGTAGAAATATGTGCAGAATGTGATTCACCCCCACCCCTTGTCGTGT TGAAACCAGCATTCGCTTTGGGCATGGAGGGCTTGATACCTGAGGCGATT CGAAAAATGGAGAACCTGCGGTCCAAGCACGATGTCGAACTCGGCGTAGC CATGGCATTACTCTACTTCCACGGCAAGGCAAAGATGGTGGACAGGTAGA CCTTCGTGGCACCGTGGGACTTTATCCTATTTATTTTGCGGAAAGGGTGT CGGTTTCGATGCTGGCAACCGCTCGTACACGGTTCTTGCAGTTGTTGTAG TTGTCGTCGTCGTCGTCGGTTGTGAGTCAGTAACCGTCCCCACGTTTATC CAGCACCCGATCTTCTGAACCCATGCTCGAAGGCAAAGAAGCGAATGGCG TGACCATACAACCAATATACAGACACCCGGGGTAGTTCCCAACCTTTGCA GAGAGGCTATCGCTCAAAATCTCCGCCAACAATATAATCAAGCAGCGAAG GCAAGAGAAAATCGCTCAAGAAAAATTGCGTATAATGAACAAACGAAAGG GGAGCCTCTACTCCATTGACTGGAAAGCTGAACAACAATCTACATGCGAT GCGGTAGGAAAAGCAATCTCAACACCAATATTCGAAGTAGTACTTTCCGA AATCATCCGTGCACTAGGTAGACGACTACACAGTATCCGAGCGGATACCG CCGAAAAACAGAACACAGCCAGCCAAGGGAATCTTGAAGTAGGTGATCCT TCTTTACGGGCCAACAATTCTTGAAAGAACGGTAGCATGGCAGGAACACT ATGCGCTCGCTCTAGACCGCCAGGGGGATGTGTCTGAAGATTTCAGGGGG GATTGCCTGACGTCTGCAGATGAATTCTGGACTTTACTGGTGTGCACGAC ATCCTGGGATCTGCTGAAGTCCTTTCACAGCACATTCTTCGTGTGATGCC GTTGAGAATCAGCGCTGCTGACATGTAGGACACGGTATAGCAGCAAGGCC AACCCTTACAGCTGGCATCAAGGTCCGCCAGGGGTGCCCTGTATTTCCAG CCCTCCGTTCGCAAGGACGAGAGTTTCTCTCCCAGCCATATGATCAGTTC GAACAACACGATGGATTTCTCACGCGCAGGGAGGCCGTGGAGACTCTCAC CGCGGCTCTCACGATTACCGAGGATATGGCAAGCGACGGAGGCGTGCTTA CAGCGGCGCGGTTCCAATGGCTCAAAGGTGGAGAAAGCAGGGCGCGCAGG CGGATACAATGTGTTGCCCTGAAGTGTGTCTCGTGGTCTACCGCGCTGAA CGACGAGTCCCTTCCCTTCCCCGGCCGGTTTCAAGTTGTGACGAAGGGTC AACCCTAAGCATAACTGCAGGCCGTTGGTGTTAGCTCCGCATAGTATTAA ACTCATTCCAACCCTAACATCATTCGAAGAGGATCGAGCGGTTCAGATTG AATGCAATGTTTCTCTCTGGAGATAGACACCCTTGGTGTACCGGCCCTGC ACGGACATGATATCCCTCTTCCACACGTTGAACTCCTGATATACACGCAG TCCCTCCTCACTCCCATACAGCAGTGTGTGAGTGATGAACGTGATGAACG CTCAACAGGTGACCGATCACGCTGGACGTTGCTTCTATGCAGGTGATCTG GAGTACGCTCGGAAGCTCGTAACCAGAGTTCAGGGCGGTGACTACTCCGC TCAAACGCCGATTCAGCAACAGGCCTTTACACTACGAGGGTGGATAGACG CCTCCATCAGTCAGCCCTGCAACAAAGAGGAAGCTTCACTTCTCAAGGAA AGCATAAGGCAAGCGGCTGCGGCCTTACCCTACATACGACATAACATTGA AGTATCTCTCGGGGGGCGGGAATATGGAATTCGCTCACTCACGGGGGCTT AGTGAAGGGGAGGGACGGAAAAAGGGAGGGGGGTCAAGTGCTTGGCAAGC ACTTATTTGCTGGGTCTGGCCTTCTACCAGTGCGGGCTAGAGATGGCTGG AGGTAAAAGGGAAATAGCCTAAGGTTCGGGAAAATCTTTTCCATGACGGG TCTGCAGTTGCTACGGTCGGCCGGTATCCCCTGCGGCGACGTTATTTACG TCGTGCTGCTCGAGCGCCTCCTCCTCATTGCACGCACGTTTCCACTTGTA TTGGTGATGCTCTCCGTGCCTCGTGTTGACAATCTACCGTTCGTCACGTT CGCGCAGCTTCTTCGAGGGCAGCGGGCAAATGCGCGACCTCGACACAATA ATGGGGAAAGCTCGATATTTCGGTGAGAAAACTAAAGTGCTAGGAGGGGT GTATGGTGCCAATCGTTTACGAAATCTGCACATACAACATCGACTAGAGG TAAGATTCAAATCGGCACTCAGGGCTCATGGGGCTGTTTTAAAAGTTCTT TCTGTAGGTTTGCAGTGACACCAGCCGGGAAAAAAACACCTACAGAAGTG GAAGCTACCACCACCGCGCTTCACGGCGAAAACCATATTTCGTTCCAACA ATACGGAGCTTTTTCAGGACCGAACTAATCCACATAGATCAAAATTGATA TTCGTCGCAAACTCAGTGATCATTGCTGAAGGAAAGGAGGGAGAGCCGCG AAGAGAGAAAGAGAGAGAGAAAGGGAAACACGCGGTCACATGCTTCTCCG CAATGTTCGTCATTGTTATTGAAGTCAGCAGCGGTGCTAACATGTGAGTT CCTGGATATCGTGCGTTTTGATATGTACTCGCGCCGCCCACCGCACAGCG ACTCGTCTAGACGGGGTGGACACAGCCGCCGACCACCTGAGCCACGCCAT CGCTCTCGAACCCCGCTATTGGCCAGCATTAATAGAAAAGGCCAGGCTTT TGGCGGCCGTGGGAGACTGGGAACAGGTGCGCAATGCTGCCAAGACGGGG GGCTGGAGTGGGTGGTGCATTAATGTTCATGGTGAAGCAACAACGTTCGA CTCATCGATGTGTACTAGACCCACCCCCACAATTCCACTCCGTATCGCAA ACGTTTCTCACGCAGTTAGCAATCAACACCTCCCCCGGCAGGATAGAGCG TCGTGTAGCAGATGACGTTCGTGTCCACCGGCGATTCATCACACAGCCGA CACGATGATGTTTTCCCCAATGATGCCCGCCTCAATTCTCTCCTTCACCC GGTCGCCCACCTCGGACGAGGTCAGGCTGAGGACGCGATTTCGAGGGTGC TGGCAATGGACGGCGACAACCTGCCGGCGCTCATGTTGCATGCCCTCCAA GGACTCACACAGGCTGGGCAGGCA
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Coding sequence (CDS) from alignment at E-siliculosus-1a_F_contig122:62061..67334-

>mRNA_E-siliculosus-1a_F_contig122.1392.1 ID=mRNA_E-siliculosus-1a_F_contig122.1392.1|Name=mRNA_E-siliculosus-1a_F_contig122.1392.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=1842bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig122:62061..67334- (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
ATGTACGGCGCCGTCAGGAGAGACAGCTCGAGCAGTGCCGGTGCCGGCAT
CGGTGGCGGTAGCTCTACGTTGAAGATGTACGGCGCCGTCAGGAGAGACA
GCTCGAGCAGTGCCGGTGCCGGCATCGGTGGCGGTAGCTCTACGTTGAAG
ACGGACTACAAAAGCCTCATCAACTATTACCTGAGGGAAGGGCTGTATCA
ACATGCCGCTGATGAGGCCAGTGAGCAGATACAGCGCCGGGGGAACGACA
CGTGTCTCCTCTACTGGGAAGACGGACTACAAAAGCCTCATCAACTATTA
CCTGAGGGAAGGGCTGTATCAACATGCCGCTGATGAGGCCAGTGAGCAGA
TACAGCGCCGGGGGAACGACACGTGTCTCCTCTACTGGGAAGCATTCGCT
TTGGGCATGGAGGGCTTGATACCTGAGGCGATTCGAAAAATGGAGAACCT
GCGGTCCAAGCACGATGTCGAACTCGGCGTAGCCATGGCATTACTCTACT
TCCACGGCAAGGCAAAGATGGTGGACAGCATTCGCTTTGGGCATGGAGGG
CTTGATACCTGAGGCGATTCGAAAAATGGAGAACCTGCGGTCCAAGCACG
ATGTCGAACTCGGCGTAGCCATGGCATTACTCTACTTCCACGGCAAGGCA
AAGATGGTGGACAGGGAGGCCGTGGAGACTCTCACCGCGGCTCTCACGAT
TACCGAGGATATGGCAAGCGACGGAGGCGTGCTTACAGCGGCGCGGTTCC
AATGGCTCAAAGGGAGGCCGTGGAGACTCTCACCGCGGCTCTCACGATTA
CCGAGGATATGGCAAGCGACGGAGGCGTGCTTACAGCGGCGCGGTTCCAA
TGGCTCAAAGGTGATCTGGAGTACGCTCGGAAGCTCGTAACCAGAGTTCA
GGGCGGTGACTACTCCGCTCAAACGCCGATTCAGCAACAGGCCTTTACAC
TACGAGGGTGGATAGACGCCTCCATCAGTCAGCCCTGCAACAAAGAGGAA
GCTTCACTTCTCAAGGAAAGCATAAGGCAAGCGGCTGCGGCCTTACCCTA
CATACGACATAACATTGAAGTGATCTGGAGTACGCTCGGAAGCTCGTAAC
CAGAGTTCAGGGCGGTGACTACTCCGCTCAAACGCCGATTCAGCAACAGG
CCTTTACACTACGAGGGTGGATAGACGCCTCCATCAGTCAGCCCTGCAAC
AAAGAGGAAGCTTCACTTCTCAAGGAAAGCATAAGGCAAGCGGCTGCGGC
CTTACCCTACATACGACATAACATTGAAGGCAGCGGGCAAATGCGCGACC
TCGACACAATAATGGGGAAAGCTCGATATTTCGGGCAGCGGGCAAATGCG
CGACCTCGACACAATAATGGGGAAAGCTCGATATTTCGCGACTCGTCTAG
ACGGGGTGGACACAGCCGCCGACCACCTGAGCCACGCCATCGCTCTCGAA
CCCCGCTATTGGCCAGCATTAATAGAAAAGGCCAGGCTTTTGGCGGCCGT
GGGAGACTGGGAACAGCGACTCGTCTAGACGGGGTGGACACAGCCGCCGA
CCACCTGAGCCACGCCATCGCTCTCGAACCCCGCTATTGGCCAGCATTAA
TAGAAAAGGCCAGGCTTTTGGCGGCCGTGGGAGACTGGGAACAGGCTGAG
GACGCGATTTCGAGGGTGCTGGCAATGGACGGCGACAACCTGCCGGCGCT
CATGTTGCATGCCCTCCAAGGACTCACACAGGCTGGGCAGGCAGCTGAGG
ACGCGATTTCGAGGGTGCTGGCAATGGACGGCGACAACCTGCCGGCGCTC
ATGTTGCATGCCCTCCAAGGACTCACACAGGCTGGGCAGGCA
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