mRNA_E-siliculosus-1a_F_contig122.1388.1 (mRNA) Ectocarpus siliculosus Ec863f_EcPH12_90f female
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Overview
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig122.1388.1 vs. uniprot
Match: D8LNX2_ECTSI (Protein phosphatase 2C containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LNX2_ECTSI) HSP 1 Score: 536 bits (1381), Expect = 1.870e-192 Identity = 264/265 (99.62%), Postives = 265/265 (100.00%), Query Frame = 1
Query: 1 MKEDLGGLGIRLFVVLDGHGELGHLVSRRCSAKLPNLVVDSNLCVARATLRMADDLRSCPVDCASSGATCVLTTIRDGKISVANLGDSKCVLARLVNGQVCAVPLSHDHKPDRPDERQRILAIGGQVGSRHLVVGSNPSGPIRIPMGPARVWYRCRGEIMGLAMSRSLGDDIAHQAGVSSEPEVKEHQIDANDQFLILATDGVWDVTEIGQAVQIVQGYASRCRGNSWDPQGAASLLAHSARKRWEGLSAVVDDITALVVRLTVP 795
MKEDLGGLG+RLFVVLDGHGELGHLVSRRCSAKLPNLVVDSNLCVARATLRMADDLRSCPVDCASSGATCVLTTIRDGKISVANLGDSKCVLARLVNGQVCAVPLSHDHKPDRPDERQRILAIGGQVGSRHLVVGSNPSGPIRIPMGPARVWYRCRGEIMGLAMSRSLGDDIAHQAGVSSEPEVKEHQIDANDQFLILATDGVWDVTEIGQAVQIVQGYASRCRGNSWDPQGAASLLAHSARKRWEGLSAVVDDITALVVRLTVP
Sbjct: 18 MKEDLGGLGVRLFVVLDGHGELGHLVSRRCSAKLPNLVVDSNLCVARATLRMADDLRSCPVDCASSGATCVLTTIRDGKISVANLGDSKCVLARLVNGQVCAVPLSHDHKPDRPDERQRILAIGGQVGSRHLVVGSNPSGPIRIPMGPARVWYRCRGEIMGLAMSRSLGDDIAHQAGVSSEPEVKEHQIDANDQFLILATDGVWDVTEIGQAVQIVQGYASRCRGNSWDPQGAASLLAHSARKRWEGLSAVVDDITALVVRLTVP 282
BLAST of mRNA_E-siliculosus-1a_F_contig122.1388.1 vs. uniprot
Match: A0A835YTT3_9STRA (Phosphatase 2C-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YTT3_9STRA) HSP 1 Score: 303 bits (775), Expect = 3.560e-99 Identity = 164/282 (58.16%), Postives = 195/282 (69.15%), Query Frame = 1
Query: 10 DLGGLGIRLFVVLDGHGELGHLVSRRCSAKLPNLVVDSNLCVARATLRMADDLRS-CPVDCASSGATCVLTTIRD-GKISVANLGDSKCVLARLVNG-------------------QVCAVPLSHDHKPDRPDERQRILAIGGQVGSRHLVVGSNPSGPIRIPMGPARVWYRCRGEIMGLAMSRSLGDDIAHQAGVSSEPEVKEHQID--ANDQFLILATDGVWDVTEIGQAVQIVQGYASRCRGNSWDPQGAASLLAHSARKRWEGLSAVVDDITALVVRL 786
D GG +R+F VLDGHGE GHLV+RRC +LP L+ + ARA + + +DL S VDC SGATCV+ TI G ++VANLGDS+CVL R G QVCAVPL+ DHKPDRPDER RI A GGQVGSR L+VGS P+GPIRIPMGPARVWY+ RGE MGLAMSRS+GD IAH AGVS++PEV EH +D A D FL+LA+DGVWDV + AV IV A+ G WDP+ AA +ARKRW+GLS ++DDITALVV+L
Sbjct: 74 DGGGDRLRVFAVLDGHGEAGHLVTRRCRERLPQLLRAARGDAARACVALHEDLASGVHVDCQCSGATCVVVTISARGAVTVANLGDSRCVLGRWECGGXXXXXXXXXXXMVGRAQRQVCAVPLTTDHKPDRPDERARIQAAGGQVGSRQLIVGSGPAGPIRIPMGPARVWYQVRGETMGLAMSRSIGDVIAHAAGVSAQPEVVEHCLDRDAGDAFLVLASDGVWDVLDAQAAVHIVAACAAAAGGAEWDPREAAXXXXXAARKRWDGLSPMIDDITALVVKL 355
BLAST of mRNA_E-siliculosus-1a_F_contig122.1388.1 vs. uniprot
Match: A0A7S4D964_HETAK (Hypothetical protein n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4D964_HETAK) HSP 1 Score: 292 bits (747), Expect = 1.450e-95 Identity = 143/259 (55.21%), Postives = 187/259 (72.20%), Query Frame = 1
Query: 13 LGGLGIRLFVVLDGHGELGHLVSRRCSAKLPNLVVDSNLCVARATLRMADDL-RSCPVDCASSGATCVLTTIRDGKISVANLGDSKCVLARLVNGQVCAVPLSHDHKPDRPDERQRILAIGGQVGSRHLVVGSNPSGPIRIPMGPARVWYRCRGEIMGLAMSRSLGDDIAHQAGVSSEPEVKEHQIDANDQFLILATDGVWDVTEIGQAVQIVQGYASRCRGNSWDPQGAASLLAHSARKRWEGLSAVVDDITALVVRL 786
+G +F VLDGHG+ GHLVS +C +LP L ++ ++R L M +L +S +D SGATCV+ + +++V NLGDSK VL R VNG PL++DHKPDRPDERQRIL GG+VG R LVVG+ P+GP+R+PMGP R+WY+ RGE MGLAMSRSLGD I H GVS++PE+ EH +D D FL+L +DG+WDVT++ QAVQIVQG ++ + WDP+ AA LA SAR+RWE +S +VDDITA+VV+L
Sbjct: 52 VGNTDEAMFCVLDGHGQQGHLVSTQCRERLPQLYRETGNDLSRTCLAMQAELEKSTAMDVKCSGATCVICVVEGRRLTVGNLGDSKAVLGRRVNGVTLPHPLTNDHKPDRPDERQRILQAGGKVGCRQLVVGNGPNGPVRLPMGPMRIWYQVRGETMGLAMSRSLGDGIVHALGVSADPELTEHLLDGEDLFLLLGSDGIWDVTDLNQAVQIVQGVVNK-NPHGWDPREAAEELAVSARRRWESMSQMVDDITAIVVKL 309
BLAST of mRNA_E-siliculosus-1a_F_contig122.1388.1 vs. uniprot
Match: A0A7S2WTT9_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WTT9_9STRA) HSP 1 Score: 271 bits (694), Expect = 6.920e-86 Identity = 137/251 (54.58%), Postives = 172/251 (68.53%), Query Frame = 1
Query: 43 VLDGHGELGHLVSRRCSAKLPNLVVDSNLCVARATLRMADDLRSCPVDCASSGATCVLTTIRDGKISVANLGDSKCVLARLVNGQVCAVPLSHDHKPDRPDERQRILAIGGQVGSRHLVVGSNPSGPIRIPMGPARVWYRCRGEIMGLAMSRSLGDDIAHQAGVSSEPEVKEHQIDANDQFLILATDGVWDVTEIGQAVQIVQGYASRCRGNS---WDPQGAASLLAHSARKRWEGLSAVVDDITALVVRL 786
V DGHGE GHLVSR +L + ++ + +RA +M +L VD SGATCV+ +R I V N GDS+ VL R NG + A+ L+ DHKPDRPDER+R++ GGQVGSR LVVG N +GP+ +P+GP RVWY+ RGE MGLAMSRSLGD IAH GVSSEPEV EH + + D F+ILA+DG+WDV E QAVQIV + +R + WD AA +L +AR+RWE LS +VDDITA+VV L
Sbjct: 181 VFDGHGEFGHLVSRIIRERLGKIWLECSQNFSRAFWQMQSELDKSSVDARCSGATCVMVVLRGNTIQVGNCGDSRAVLGRRSNGTISALQLTSDHKPDRPDERRRVMQAGGQVGSRQLVVGHNANGPVTLPLGPPRVWYQIRGETMGLAMSRSLGDGIAHSNGVSSEPEVTEHAVSSTDVFVILASDGIWDVIETNQAVQIVGNHFARATASGSTQWDVVDAAMVLTTTARRRWESLSPMVDDITAVVVDL 431
BLAST of mRNA_E-siliculosus-1a_F_contig122.1388.1 vs. uniprot
Match: A0A7S3ZZR6_9STRA (Hypothetical protein n=4 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S3ZZR6_9STRA) HSP 1 Score: 266 bits (679), Expect = 1.280e-83 Identity = 139/255 (54.51%), Postives = 170/255 (66.67%), Query Frame = 1
Query: 31 RLFVVLDGHGELGHLVSRRCSAKLPNLVVDSNLCVARATLRMADDLRSCPVDCASSGATCVLTTIRDGKISVANLGDSKCVLARLVNGQVCAVPLSHDHKPDRPDERQRILAIGGQVGSRHLVVGSNPSGPIRIPMGPARVWYR---CRGEIMGLAMSRSLGDDIAHQAGVSSEPEVKEHQIDANDQFLILATDGVWDVTEIGQAVQIVQGYASRCRGNSWDPQGAASLLAHSARKRWEGLSAVVDDITALVVRL 786
R + VLDGHGE+GHLVS+RCS +L V S L ++ A M +DL C +D SGATCV + D + VAN+GDS+ VL L +CA PL+ DHKPDR DE+ RI+A GGQV R LVVG + +GPI +P+GP RVWYR G+ MGLAMSRS GD IAH GVS EPE+ ++ +D D+FLI ATDGVWDV + QAV+IV R N WDP AA L SAR RW+ LS ++DDITALVV L
Sbjct: 158 RCYGVLDGHGEIGHLVSKRCSQQLCEHFVKSQLDMSLAFRLMQEDLSQCELDIKCSGATCVFVHLHDSYLRVANIGDSRGVLGHLDGANICATPLTSDHKPDRHDEQIRIVACGGQVSCRQLVVGHSSNGPITLPLGPPRVWYRRNSSHGDTMGLAMSRSFGDAIAHGLGVSCEPEITQYNLDLADKFLICATDGVWDVIDNAQAVKIVHTLYER--SNDWDPLEAAHTLCISARNRWQSLSPMIDDITALVVDL 410
BLAST of mRNA_E-siliculosus-1a_F_contig122.1388.1 vs. uniprot
Match: A0A482S1K4_9ARCH (Protein serine/threonine phosphatase 2C family protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482S1K4_9ARCH) HSP 1 Score: 262 bits (669), Expect = 4.090e-82 Identity = 128/254 (50.39%), Postives = 176/254 (69.29%), Query Frame = 1
Query: 28 IRLFVVLDGHGELGHLVSRRCSAKLPNLVVDSNLCVARATLRMADDLRSCPVDCASSGATCVLTTIRDGKISVANLGDSKCVLARL-VNGQVCAVPLSHDHKPDRPDERQRILAIGGQVGSRHLVVGSNPSGPIRIPMGPARVWYRCRGEIMGLAMSRSLGDDIAHQAGVSSEPEVKEHQIDANDQFLILATDGVWDVTEIGQAVQIVQGYASRCRGNSWDPQGAASLLAHSARKRWEGLSAVVDDITALVVRL 786
+R++ VLDGHGE GH+VS+RC P+ + +N V A M +DL S +D SGATCV+ + + +++V N GDS+ VL R +G + A PLS+DHKPD+P+ER+RIL GG +G R ++V GP+ +P+GP RVWY+ RGE +GLAMSRSLGD I H+ GV++EPE+ EHQID +D+F+ILATDGVWDV + AVQ+V G ASR +W A++ + AR RWE LS +VDDIT +VV++
Sbjct: 183 LRVYCVLDGHGEHGHIVSKRCRENFPHFLKSTNWQVEAAFNMMQNDLTSSEIDVRCSGATCVIACVSNNRLTVYNCGDSRAVLGRRSASGAIAAYPLSNDHKPDKPEERKRILGCGGHLGCRQVLVNQGNRGPVSMPVGPCRVWYQHRGETLGLAMSRSLGDSIVHKVGVTAEPELTEHQIDDHDEFIILATDGVWDVVDNNHAVQMVFGVASR--SVNWSVLEASNAVCRFARSRWEKLSPMVDDITCVVVKI 434
BLAST of mRNA_E-siliculosus-1a_F_contig122.1388.1 vs. uniprot
Match: A0A7S1U9X7_9STRA (Hypothetical protein n=2 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1U9X7_9STRA) HSP 1 Score: 258 bits (658), Expect = 1.160e-78 Identity = 136/284 (47.89%), Postives = 176/284 (61.97%), Query Frame = 1
Query: 34 LFVVLDGHGELGHLVSRRCSAKLPNLVVDSNLCVARATLRMADDLRSCPVDCASSGATCVLTTI------RDGK--ISVANLGDSKCVLARLVNGQVCAVPLSHDHKPDRPDERQRILAIGGQVGSRHLVVGSNPSGPIRIPMGPARVWYRCRGEIMGLAMSRSLGDDIAHQAGVSSEPEVKEHQIDANDQFLILATDGVWDVTEIGQAVQIV------------------------QGYASR-CRGNSWDPQGAASLLAHSARKRWEGLSAVVDDITALVVRL 786
LF V DGHGE GHLVSR+C ++P ++ + L + A D +SC VDC+ SGAT V+ I R G + + N GDS+ V+AR+VN + V L+ DHKPDRPDER+RI A+GG+VG+R +VVG P+G I +P+GPAR+WY CRGE MGLAMSRSLGD IAH+ G S EPE+ + D FL+LATDGVWDV + AV I G++S R WDP+ AA + +AR+RWE LSA+VDDIT +VV+L
Sbjct: 316 LFAVFDGHGEFGHLVSRKCREEMPQRLISNRLDMGAAFDEAQDHFKSCEVDCSCSGATAVVIIIDNATRGRGGSSTLRIGNCGDSRAVVARVVNNTITGVTLTKDHKPDRPDERRRITAMGGKVGTRQVVVGHGPNGAITMPVGPARIWYNCRGETMGLAMSRSLGDLIAHRVGGSHEPEMTMRNLQEEDMFLLLATDGVWDVLDANAAVDIAFEVMMEAREEAGLGPKRVPMGGAAAGFSSEEWRSIPWDPEVAAKRICTTARRRWENLSAMVDDITCVVVKL 599
BLAST of mRNA_E-siliculosus-1a_F_contig122.1388.1 vs. uniprot
Match: A0A7S2CMF9_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2CMF9_9STRA) HSP 1 Score: 238 bits (606), Expect = 2.420e-72 Identity = 122/255 (47.84%), Postives = 166/255 (65.10%), Query Frame = 1
Query: 37 FVVLDGHGELGHLVSRRCSAKLPNLVVDSNLCVARATLRMADDLRSCPVDCASSGATCVLTTIRDGKISVANLGDSKCVLARLVNG--QVCAVPLSHDHKPDRPDERQRILAIGGQVGSRHLVVGSNPSGPIRIPMGPARVWYRCRGEIMGLAMSRSLGDDIAHQAGVSSEPEVKEHQIDANDQFLILATDGVWDVTEIGQAVQIVQGYASRC-RGNS-WDPQGAASLLAHSARKRWEGLSAVVDDITALVVRLT 789
++V DGHG+ GHLVS+ K+ +D+ + L M L VD SSG+TCV+ + + + VAN GDS+ VL ++VN Q+ + L+ DHKPDRPDER R+ GGQVG R +++ N +R+P+GPARVWY RGE GLAMSRSLGD I H GVS EPEV + +D ++F+I+ATDG+WDV VQIV + + R NS W+PQ AA +L +AR+RWEG+S +VDDITA+V+ L+
Sbjct: 202 WIVFDGHGDRGHLVSKFGREKMGKTWIDNKFRLRETFLSMQQQLNKSSVDVRSSGSTCVMVVLDNDCLKVANCGDSRAVLGKVVNSSSQLATIVLTDDHKPDRPDERMRVEKAGGQVGCRQMLM--NRGSSVRVPLGPARVWYTNRGETTGLAMSRSLGDAIVHTFGVSEEPEVTQRTLDKTERFIIVATDGIWDVLHSSHVVQIVDKHFNEAARSNSPWNPQDAAMVLCLTARRRWEGMSTMVDDITAVVIDLS 454
BLAST of mRNA_E-siliculosus-1a_F_contig122.1388.1 vs. uniprot
Match: A0A7S2XVV9_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XVV9_9STRA) HSP 1 Score: 217 bits (553), Expect = 1.830e-66 Identity = 111/191 (58.12%), Postives = 136/191 (71.20%), Query Frame = 1
Query: 1 MKEDLGGLGIR-LFVVLDGHGELGHLVSRRCSAKLPNLVVDSNLCVARATLRMADDLRSCP-VDCASSGATCVLTTIRDGKISVANLGDSKCVLARLVNGQVCAVPLSHDHKPDRPDERQRILAIGGQVGSRHLVVGSNPSGPIRIPMGPARVWYRCRGEIMGLAMSRSLGDDIAHQAGVSSEPEVKEHQI 567
++E GG G + VLDGHG+ GHLVS L + V+RA LRM +DL + P +D SGATCV+ +R + V NLGDS+CVLAR VNG + V LS+DHKPDRPDERQRILA GG+VG R LVVG+ PSGP+R+PMGP R+WY+ RGE MGLAMSRSLGD I H GVS++PE+KEHQ+
Sbjct: 103 LEERCGGSGDEGFYCVLDGHGQQGHLVSGYIRENLVRHYSECGQDVSRACLRMQEDLDTTPTLDTKCSGATCVIAILRGRSLLVGNLGDSRCVLARRVNGVLSPVALSNDHKPDRPDERQRILAAGGKVGCRQLVVGNGPSGPVRLPMGPMRIWYQVRGETMGLAMSRSLGDSIVHTQGVSADPELKEHQV 293
BLAST of mRNA_E-siliculosus-1a_F_contig122.1388.1 vs. uniprot
Match: A0A7S2NWU1_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2NWU1_9STRA) HSP 1 Score: 191 bits (486), Expect = 1.930e-55 Identity = 104/265 (39.25%), Postives = 154/265 (58.11%), Query Frame = 1
Query: 7 EDLGGLGIRLFVVLDGHGELGHLVSRRCSAKLPNLVVDSNLCVARATLRMADDLRSCPVDCASSGATCVLTTIRDGK-ISVANLGDSKCV-LARLVNGQVCAVPLSHDHKPDRPDERQRILAIGGQVGSRHLVVGSNPSGPIRIPMGPARVWYRCRGEIMGLAMSRSLGDDIAHQAGVSSEPEVKEHQIDANDQFLILATDGVWDVTEIGQAVQIVQGYASRCRGN--SWDPQGAASLLAHSARKRWEGLSAV-VDDITALVVRL 786
E+LG + ++V DGHG GH+VS+ C A LP ++ ++ RA + DL S +D SG TCV ++ + I V N+GDS+ + L R N + A+PLS DHKP + DER+RIL GG++ S+H G P+RVW+ MGLAMSRS+GD+ AH+ GVS EP++ H+I+ D ++LA+DG+WDV + ++Q + GN W+ + AA L AR RWE +S +DD+T LV+++
Sbjct: 116 EELGSPSV--YMVFDGHGRFGHVVSKHCKAVLPKILAETGYDQERAISVLQSDLESSAIDIECSGCTCVTAIVKQNRTIEVGNVGDSRAIILQRSPNNTLKALPLSIDHKPSQLDERKRILETGGRIASKHCSAG------------PSRVWFEYNNTTMGLAMSRSVGDEFAHRVGVSHEPQIFHHKIEPQDTCIVLASDGLWDVYSNDEVAHLIQ---TCINGNYADWNAKIAAVFLTKMARMRWEHISTEHIDDVTCLVIKI 363 The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig122.1388.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-siliculosus-1a_F_contig122.1388.1 >prot_E-siliculosus-1a_F_contig122.1388.1 ID=prot_E-siliculosus-1a_F_contig122.1388.1|Name=mRNA_E-siliculosus-1a_F_contig122.1388.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=266bp MKEDLGGLGIRLFVVLDGHGELGHLVSRRCSAKLPNLVVDSNLCVARATLback to top mRNA from alignment at E-siliculosus-1a_F_contig122:17004..21122+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-siliculosus-1a_F_contig122.1388.1 ID=mRNA_E-siliculosus-1a_F_contig122.1388.1|Name=mRNA_E-siliculosus-1a_F_contig122.1388.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=4119bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig122:17004..21122+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top Coding sequence (CDS) from alignment at E-siliculosus-1a_F_contig122:17004..21122+ >mRNA_E-siliculosus-1a_F_contig122.1388.1 ID=mRNA_E-siliculosus-1a_F_contig122.1388.1|Name=mRNA_E-siliculosus-1a_F_contig122.1388.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=1596bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig122:17004..21122+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top |