mRNA_E-siliculosus-1a_F_contig1218.1380.1 (mRNA) Ectocarpus siliculosus Ec863f_EcPH12_90f female
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Overview
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig1218.1380.1 vs. uniprot
Match: A0A6H5JZJ2_9PHAE (S5A_REDUCTASE domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JZJ2_9PHAE) HSP 1 Score: 726 bits (1874), Expect = 2.520e-257 Identity = 370/385 (96.10%), Postives = 374/385 (97.14%), Query Frame = 3
Query: 15 MMARLRRALPKQLGATAVLLCTLLAQSQGFFAAPNTPTTHSKLASDLNGRTNGHGQFAARSDSSSGGSSTALGAASSRERLFETVTTLRGGSPAMKIPGYDAAAAAIAAISVPAIAWTGGPALFAQGVLLSMVTSIDGFRIREHFVSYGYGFSVALQAAGAAWLFRDNLHTLSALHAAGLVAYGLRLASFCGWRDTLSCFQNRRKRLAQPKKKNAGPPYTFWGICSMLYAFLALPTVYALRRLPAAEGSYVGVSQAGLAVMAVGLLVESVADLQKSLFKKKSPDTFCSTGLYSFSRHPNYFGEAVFWTGAWLAAIPAYTKWYHWVFSVIGPSQIVSIILRATGGLEKRQVEKYGSSKEWKEYAKSTPVFVPGTRQYTWEKKAETK 1169
MMARLRRALPKQLGATAVLLCTLLAQS+GFFAAPNTPTTHSKLASD NGRTNGHGQF ARSDS SGGSS ALGAA SRERLFETVTTLRGGSPAMKIPGYDAAAAAIAAIS+PAIAWTGGPALFAQGVLLSMVTSIDGFRIREHFVSYGYGFSVALQAAGAAWLFRD LHTLSALHAAGLVAYGLRLASFCGWRDTLSCFQNRRKR QPKK+NAGPPYTFWGICSMLYAFLALPTVYALRRLPAAEGSYVGVSQAGLAVMAVGLLVESVADLQKSLFKKKSPDTFCSTGLY FSRHPNY GEAVFWTGAWLAAIPAYTKWYHWVFSVIGPSQIVSIILRATGGLEKRQVEKYGSSKEWKEYAKSTPVFVPGTRQY+WEK AETK
Sbjct: 1 MMARLRRALPKQLGATAVLLCTLLAQSEGFFAAPNTPTTHSKLASDSNGRTNGHGQFVARSDSGSGGSSAALGAAGSRERLFETVTTLRGGSPAMKIPGYDAAAAAIAAISIPAIAWTGGPALFAQGVLLSMVTSIDGFRIREHFVSYGYGFSVALQAAGAAWLFRDKLHTLSALHAAGLVAYGLRLASFCGWRDTLSCFQNRRKRPTQPKKQNAGPPYTFWGICSMLYAFLALPTVYALRRLPAAEGSYVGVSQAGLAVMAVGLLVESVADLQKSLFKKKSPDTFCSTGLYRFSRHPNYLGEAVFWTGAWLAAIPAYTKWYHWVFSVIGPSQIVSIILRATGGLEKRQVEKYGSSKEWKEYAKSTPVFVPGTRQYSWEK-AETK 384
BLAST of mRNA_E-siliculosus-1a_F_contig1218.1380.1 vs. uniprot
Match: A0A0P6XDT8_9CHLR (S5A_REDUCTASE domain-containing protein n=1 Tax=Leptolinea tardivitalis TaxID=229920 RepID=A0A0P6XDT8_9CHLR) HSP 1 Score: 162 bits (410), Expect = 2.230e-41 Identity = 92/256 (35.94%), Postives = 139/256 (54.30%), Query Frame = 3
Query: 399 LLSMVTSIDGFRIREHFVSYGYGFSVALQAAGAAWLFRDNLHTLSALHAAGLVAYGLRLASFCGWRDTLSCFQNRRKRLAQPKKKNAGP-PYTFWGICSMLYAFLALPTVYALRR--LPAAEGSYVGVSQAGLAVMAVGLLVESVADLQKSLFKKKSPDTFCSTGLYSFSRHPNYFGEAVFWTGAWLAAIPAYTKWYHWVFSVIGPSQIVSIILRATGGLEKRQVEKYGSSKEWKEYAKSTPVFVPGTRQYTWEKK 1157
++++ + GFR +F++ GY FS+ + L N L L +A ++ +GLRL F R+ +Q R R+ + P + W S+LY + P +++L PA G GL +M GL++E +AD QKS FK K+P+TFC TGLYS R PNY GE +FW G W+ I Y + W+ S+IG + IV I+ +T LEK Q+ +YG+ E+++Y+KS PV +P YT +KK
Sbjct: 14 IITLAVTAVGFRRMVYFLNIGYAFSIVAVIILSVILMWKNATVLILLQSAAIIFWGLRLGIFVTRREMSKGYQKERDRIDKEYTGITLPIKFAIWISVSVLYLMMVSPLLFSLETEYQPAPAGRIF--QFLGLVLMIGGLILEGIADRQKSAFKLKNPNTFCHTGLYSVVRSPNYLGEIIFWVGTWVMGIGFYKTVWEWIISIIGMACIVYIMFGSTKRLEKTQISRYGNLPEFQQYSKSVPVLIPWLPLYTLQKK 267
BLAST of mRNA_E-siliculosus-1a_F_contig1218.1380.1 vs. uniprot
Match: A0A7S1H721_HEMAN (Hypothetical protein n=1 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S1H721_HEMAN) HSP 1 Score: 161 bits (407), Expect = 1.160e-39 Identity = 95/255 (37.25%), Postives = 140/255 (54.90%), Query Frame = 3
Query: 369 GGPALFAQGVLLSMVTSIDGFRIREHFVSYGYGFSVALQAAGAAWLFRDNLHTLSALHAAGLVAYGLRLASFCGWRDTLSCFQNRRKRLAQPKKKNAGPPYTFWGICSMLYAFLALPTVYALRRLPAAEGSYVGVSQAGLAVMAVGLLVESVADLQKSLFKKKSPDTFCSTGLYSFSRHPNYFGEAVFWTGAWLAAIPAYTKWYHWVFSVIGPSQIVSIILRATGGLEKRQVEKYGSSKEWKEYAKSTPVFVPGT 1133
G PA FA +S++ S GF +FV YGY S+ + F + HA G++A+G R+ +F +R+ + Q + + KK + W S+ YA L P ++ L+ A S +++ GL V AVGLL+ES +D KS FK+ SP++F S+GLY F RHPNYFGE +FW G++ A + + T W + +G + IV+I+L+AT LEK+Q KY E+ EY KSTP +P T
Sbjct: 44 GLPAAFA----VSLIASAVGFISAVYFVGYGYALSMIALGSVTLQRFMATASQPAVYHAVGVIAWGARILTFLLYREFFAWKQLKERNRETNKKFAFTAKVSTWLFVSIFYALLFSPVLFHLQ----AASSIPVLTKTGLGVAAVGLLIESQSDAAKSSFKQSSPESFMSSGLYRFCRHPNYFGEVIFWGGSYAAGVGSLTSPLAWTSASLGMAGIVAIMLQATESLEKKQALKYAELPEYAEYVKSTPKLIPFT 290
BLAST of mRNA_E-siliculosus-1a_F_contig1218.1380.1 vs. uniprot
Match: A0A2E9R051_9DELT (S5A_REDUCTASE domain-containing protein n=1 Tax=Deltaproteobacteria bacterium TaxID=2026735 RepID=A0A2E9R051_9DELT) HSP 1 Score: 154 bits (388), Expect = 3.350e-38 Identity = 93/252 (36.90%), Postives = 132/252 (52.38%), Query Frame = 3
Query: 399 LLSMVTSIDGFRIREHFVSYGYGFSVALQAAGAAWLFRDNLHTLSALHAAGLVAYGLRLASFCGWRDTLSCFQNRRKRLAQPKKKNAG--PPYTFWGICSMLYAFLALPTVYALR-RLPAAEGSYVGVSQAGLAVMAVGLLVESVADLQKSLFKKKSPDTFCSTGLYSFSRHPNYFGEAVFWTGAWLAAIPAYTKWYHWVFSVIGPSQIVSIILRATGGLEKRQVEKYGSSKEWKEYAKSTPVFVPGTRQYT 1145
L+++V S GF +FVS GY FS+ A F +L S +H L YG RL +F R+ ++ K + Q + +N G W SMLY + P ++ L + + S+ + GL + G+L+E++AD QKS FKK PD FC GLY R PNYFGE +FW G W A IP YT HWV S+IG I+ I++ +T LE +Q E+YG + +++Y S PV P Y+
Sbjct: 23 LIALVISAGGFYRLVYFVSIGYAFSITGMAIAGGIFFWPSLGVYSLVHMVALGIYGTRLGTFLVARERKPSYKKELKEV-QERAENVGVSKKLLIWLGVSMLYVAMFSPGLFHLTYKRMTKDVSFSLLLVVGLVIAFGGILLEALADHQKSAFKKDQPDRFCDVGLYRHMRCPNYFGEILFWIGNWCAGIPFYTHLLHWVVSLIGLVCIILIMMGSTKRLEHKQDERYGELEAYQQYVSSVPVLFPFVPLYS 273
BLAST of mRNA_E-siliculosus-1a_F_contig1218.1380.1 vs. uniprot
Match: A0A7S0TGM9_HEMAN (Hypothetical protein (Fragment) n=1 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S0TGM9_HEMAN) HSP 1 Score: 161 bits (407), Expect = 5.300e-38 Identity = 95/255 (37.25%), Postives = 140/255 (54.90%), Query Frame = 3
Query: 369 GGPALFAQGVLLSMVTSIDGFRIREHFVSYGYGFSVALQAAGAAWLFRDNLHTLSALHAAGLVAYGLRLASFCGWRDTLSCFQNRRKRLAQPKKKNAGPPYTFWGICSMLYAFLALPTVYALRRLPAAEGSYVGVSQAGLAVMAVGLLVESVADLQKSLFKKKSPDTFCSTGLYSFSRHPNYFGEAVFWTGAWLAAIPAYTKWYHWVFSVIGPSQIVSIILRATGGLEKRQVEKYGSSKEWKEYAKSTPVFVPGT 1133
G PA FA +S++ S GF +FV YGY S+ + F + HA G++A+G R+ +F +R+ + Q + + KK + W S+ YA L P ++ L+ A S +++ GL V AVGLL+ES +D KS FK+ SP++F S+GLY F RHPNYFGE +FW G++ A + + T W + +G + IV+I+L+AT LEK+Q KY E+ EY KSTP +P T
Sbjct: 37 GLPAAFA----VSLIASAVGFISAVYFVGYGYALSMIALGSVTLQRFMATASQPAVYHAVGVIAWGARILTFLLYREFFAWKQLKERNRETNKKFAFTAKVSTWLFVSIFYALLFSPVLFHLQ----AASSIPVLTKTGLGVAAVGLLIESQSDAAKSSFKQSSPESFMSSGLYRFCRHPNYFGEVIFWGGSYAAGVGSLTSPLAWTSASLGMAGIVAIMLQATESLEKKQALKYAELPEYAEYVKSTPKLIPFT 283
BLAST of mRNA_E-siliculosus-1a_F_contig1218.1380.1 vs. uniprot
Match: A0A349VPE1_9FIRM (Steroid reductase n=2 Tax=Clostridiales bacterium TaxID=1898207 RepID=A0A349VPE1_9FIRM) HSP 1 Score: 149 bits (376), Expect = 8.590e-37 Identity = 85/244 (34.84%), Postives = 130/244 (53.28%), Query Frame = 3
Query: 402 LSMVTSIDGFRIREHFVSYGYGFSVALQAAGAAWLFRDNLHTLSALHAAGLVAYGLRLASFCGWRDTLSCFQNR--RKRLAQPKKKNAGPPYTFWGICSMLYAFLALPTVYALRRLPAAEGSYVGVSQAGLAVMAVGLLVESVADLQKSLFKKKSPDTFCSTGLYSFSRHPNYFGEAVFWTGAWLAAIPAYTKWYHWVFSVIGPSQIVSIILRATGGLEKRQVEKYGSSKEWKEYAKSTPVFVP 1127
++M+ S GF+ +F+S GYGFSV+ A L RDNL + L YG+RL + R+ S + + + K G W C++LY+ P + LR +G + G+ +MA G++ ES++DLQK+ KKK+PDTF TGL+SF R PNY GE +FWTG ++ I A++ W +++G I+ ++ LE RQ + YG+ E++ Y K TP+ VP
Sbjct: 9 VAMIISAIGFKKYVYFISLGYGFSVSGIAITTMILGRDNLIPGTIAICILLWIYGVRLGGYLLIRELKSASYRKAMKNNIKDGKNMKIGVKIAIWVTCALLYSCQTAPIYFRLRE----KGEADTMLYVGIGIMAFGVIFESISDLQKNTAKKKNPDTFVRTGLFSFVRCPNYLGEMIFWTGVLVSGIGAFSDPVFWTIAILGYLGIIYVMFSGARRLELRQNKNYGNDPEYQAYVKKTPIMVP 248
BLAST of mRNA_E-siliculosus-1a_F_contig1218.1380.1 vs. uniprot
Match: A0A1Q3YUG8_9HYPH (S5A_REDUCTASE domain-containing protein n=2 Tax=Devosiaceae TaxID=2831106 RepID=A0A1Q3YUG8_9HYPH) HSP 1 Score: 148 bits (374), Expect = 2.200e-36 Identity = 91/245 (37.14%), Postives = 130/245 (53.06%), Query Frame = 3
Query: 396 VLLSMVTSIDGFRIREHFVSYGYGFSVALQAAGAAWLFRDNLHTLSALHAAGLVAYGLRLASFCGWRDTLSCFQNRRKRLAQPKKKNAGP-PYTFWGICSMLYAFLALPTVYALRRLPAAEGSYVGVSQAGLAVMAVGLLVESVADLQKSLFKKKSPDTFCSTGLYSFSRHPNYFGEAVFWTGAWLAAIPAYTKWYHWVFSVIGPSQIVSIILRATGGLEKRQVEKYGSSKEWKEYAKSTPVFVP 1127
+LL + S GFR + F+S GYGF +A QA A L+R+ L L AYGLRL + R+ S F + AGP + W S LY +A P ++ L + AA G+ V AG+A+M GLL+E++AD QKS FK +P F GLY+ R PNYFGE +FW G ++A + AY W+ + IG I I+L + LE +Q E+YG +++Y + P+ +P
Sbjct: 18 LLLCLAISALGFRRVDWFISLGYGFFIAAQALLFALLYREALSFWLVAQLVLLFAYGLRLGGYLIGRERASSFARELEASRARSAGIAGPVKFAIWVSVSALYVAMASPALFGL--VQAAAGAAVPSLPAGVAIMLAGLLLEALADWQKSRFKAANPRAFMRQGLYAIVRCPNYFGEMLFWLGGFVAGLSAYRSLGAWLIAGIGLVCIELIMLGSARRLELKQAERYGGEPAYRDYVERVPILIP 260
BLAST of mRNA_E-siliculosus-1a_F_contig1218.1380.1 vs. uniprot
Match: A0A1Y1XPH2_9FUNG (DUF1295-domain-containing protein n=1 Tax=Anaeromyces robustus TaxID=1754192 RepID=A0A1Y1XPH2_9FUNG) HSP 1 Score: 142 bits (357), Expect = 2.710e-34 Identity = 87/248 (35.08%), Postives = 133/248 (53.63%), Query Frame = 3
Query: 414 TSIDGFRIREHFVSYGYGFSVALQAAGAAWLFRDNLHTLSALHAAGLVAYGLRLASFCGWRDTLSCFQNRRKRLAQPKKK-NAGPPYTFWGICSMLYAFLALPTVYALRRLPAAEGSYVGVSQAGLAVMAVGLLVESVADLQKSLFKKKSPDTFCSTGLYSFSRHPNYFGEAVFWTGAWLAAIPAYTKWYHWVFSVIGPSQIVSIILRATGGLEKRQVEKYGSSKEWKEYAKSTPVFVPGTRQYTWEK 1154
TSI GF ++FV+YGY S+ L +FR NL + + + ++ +GLRL SF R+ S R+ K+K N T W C+++Y+F +P Y L+ E + G+ + A+GL++ES+AD QK FKK+SP+ FC TGL++ R PNY GE + W G +++ + Y W + G I S + A LEKRQ + YG +KE++EY TP+ +P Y++ K
Sbjct: 15 TSI-GFIQSKYFVTYGYTGSIVLLGLANLIIFRHNLTIYTTILSILVILHGLRLGSFIFIRNKNSSTYRRQIDEDDEKRKANFMMSLTLWVSCALIYSFEVIPISYRLKN----ENKDDICALIGIIITAMGLIMESLADSQKYNFKKRSPNRFCDTGLFTVVRFPNYLGEILIWFGLFISGMTIYQGILQWAGATFGFLAIGSTMYFAAVSLEKRQNQNYGDNKEYQEYIHKTPILIPFLPIYSFSK 257
BLAST of mRNA_E-siliculosus-1a_F_contig1218.1380.1 vs. uniprot
Match: UPI001EE98285 (DUF1295 domain-containing protein n=1 Tax=Rhodopseudomonas sp. HC1 TaxID=2897386 RepID=UPI001EE98285) HSP 1 Score: 142 bits (358), Expect = 2.790e-34 Identity = 84/259 (32.43%), Postives = 136/259 (52.51%), Query Frame = 3
Query: 381 LFAQGVLLSMVTSIDGFRIREHFVSYGYGFSVALQAAGAAWLFRDNLHTLSALHAAGLVAYGLRLASFCGWRDTLSCFQNRRKRLAQPKKKNAG----PPYTFWGICSMLYAFLALPTVYALRRLPAAEGSYVGVSQAGLAVMAVGLLVESVADLQKSLFKKKSPDTFCSTGLYSFSRHPNYFGEAVFWTGAWLAAIPAYTKWYHWVFSVIGPSQIVSIILRATGGLEKRQVEKYGSSKEWKEYAKSTPVFVPGTRQYT 1145
L +L+S+ S GFR +FVS Y ++A Q+ +F ++ L L+ YG+RL +F R+ + K LA +++ A W S+L+ L LP + AEG + + G+ +M GL++ESVAD QKS +K+ +P +C GLY R PNYFGE +FW G W+A + AY+ W+ + +G I+ ++ A GLE++Q ++YG+ +++EY ++ P+ P T YT
Sbjct: 7 LVGLALLISLAVSAAGFRRVYYFVSLCYAGAIAAQSLVFMLVFYASIEGWVLLMMLALLVYGVRLGAFLAVRERNPGYA---KELAGAERRTADVLLWQKGAIWLGVSLLFTLLFLPALLVASLQ--AEGVWPASAPLGVMLMTAGLVIESVADWQKSRYKQANPTRYCDVGLYRMVRCPNYFGEMLFWFGVWVAGLSAYSTLAAWLLTTLGLLYILGLMTAAAAGLERKQDDRYGTMADYQEYVRTVPILFPITTIYT 260
BLAST of mRNA_E-siliculosus-1a_F_contig1218.1380.1 vs. uniprot
Match: F2JRK8_CELLD (S5A_REDUCTASE domain-containing protein n=2 Tax=Cellulosilyticum TaxID=698776 RepID=F2JRK8_CELLD) HSP 1 Score: 141 bits (356), Expect = 5.320e-34 Identity = 87/256 (33.98%), Postives = 126/256 (49.22%), Query Frame = 3
Query: 396 VLLSMVTSIDGFRIREHFVSYGYGFSVALQAAGAAWLFRDNLHTLSALHAAGLVAYGLRLASFCGWRDTLSCFQNR--RKRLAQPKKKNAGPPYTFWGICSMLYAFLALPTVYALRRLPAAEGSYVGV-SQAGLAVMAVGLLVESVADLQKSLFKKKSPDTFCSTGLYSFSRHPNYFGEAVFWTGAWLAAIPAYTKWYHWVFSVIGPSQIVSIILRATGGLEKRQVEKYGSSKEWKEYAKSTPVFVPGTRQYTWEK 1154
+++++V S GF +F+S GYGFS+A LF ++L + + V YG RL + R+ S +K + + W CS+LYA P L+ G V S G +M G+L+ES+AD+QKS KKK+P FC +GLY R PNY GE +FWTG ++++I Y + W + G IV I+ LE RQ YG + E+K Y K TP+ +P Y+ EK
Sbjct: 15 IVIALVVSSVGFYKYVYFISLGYGFSIAAMGIAMPILFFNDLSIGTMVSCMLFVIYGCRLGGYLLVRELKSASYRHTMKKEMKDGSTMKIASKVSIWVSCSLLYALQISPVFLRLQ-----NGVKTDVFSIVGAMIMVCGILLESLADIQKSKAKKKNPSRFCDSGLYKIVRCPNYLGEVLFWTGVFVSSINVYVGVWQWTMASFGYICIVYIMFGGARRLEIRQNRNYGDNPEYKTYVKQTPILLPFIPLYSVEK 265 The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig1218.1380.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-siliculosus-1a_F_contig1218.1380.1 >prot_E-siliculosus-1a_F_contig1218.1380.1 ID=prot_E-siliculosus-1a_F_contig1218.1380.1|Name=mRNA_E-siliculosus-1a_F_contig1218.1380.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=388bp MMARLRRALPKQLGATAVLLCTLLAQSQGFFAAPNTPTTHSKLASDLNGRback to top mRNA from alignment at E-siliculosus-1a_F_contig1218:9311..15691- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-siliculosus-1a_F_contig1218.1380.1 ID=mRNA_E-siliculosus-1a_F_contig1218.1380.1|Name=mRNA_E-siliculosus-1a_F_contig1218.1380.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=6381bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1218:9311..15691- (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top Coding sequence (CDS) from alignment at E-siliculosus-1a_F_contig1218:9311..15691- >mRNA_E-siliculosus-1a_F_contig1218.1380.1 ID=mRNA_E-siliculosus-1a_F_contig1218.1380.1|Name=mRNA_E-siliculosus-1a_F_contig1218.1380.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=2328bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1218:9311..15691- (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top |