mRNA_E-siliculosus-1a_F_contig12114.1351.1 (mRNA) Ectocarpus siliculosus Ec863f_EcPH12_90f female
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Overview
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig12114.1351.1 vs. uniprot
Match: A0A3T1DVJ3_9GAMM (Aldedh domain-containing protein n=1 Tax=Halomonas olivaria TaxID=390919 RepID=A0A3T1DVJ3_9GAMM) HSP 1 Score: 280 bits (717), Expect = 2.010e-93 Identity = 137/145 (94.48%), Postives = 141/145 (97.24%), Query Frame = 1
Query: 1 MSNSIKTVNPSNGETLETYALMSSAEAKQVVDDCYEAFLDWRLESLESRAKTVKAIGQALQNHKEELADLMVKEMGKLPSQASQEVDLCTGICDYTAEHGPKKLADEERQPSNGERGFVTYSPMGVIYGIQPWNFPAYQVIRYSI 435
MSNSIKT+NP+NGETLETYALMSSAEAKQVVD CYEAFLDWRLESLESRAKTVKAIGQALQ HK+ELADLMVKEMGKLPSQA QEVDLCTGICDYTAEHGPKKLADEERQP NGERGFVTYSPMGVIYGIQPWNFPAYQV+RYSI
Sbjct: 1 MSNSIKTINPTNGETLETYALMSSAEAKQVVDACYEAFLDWRLESLESRAKTVKAIGQALQKHKDELADLMVKEMGKLPSQARQEVDLCTGICDYTAEHGPKKLADEERQPGNGERGFVTYSPMGVIYGIQPWNFPAYQVVRYSI 145
BLAST of mRNA_E-siliculosus-1a_F_contig12114.1351.1 vs. uniprot
Match: A0A653VXN3_9GAMM (Succinate semialdehyde dehydrogenase (NAD(P)+) Sad n=37 Tax=root TaxID=1 RepID=A0A653VXN3_9GAMM) HSP 1 Score: 276 bits (706), Expect = 1.990e-89 Identity = 134/145 (92.41%), Postives = 139/145 (95.86%), Query Frame = 1
Query: 1 MSNSIKTVNPSNGETLETYALMSSAEAKQVVDDCYEAFLDWRLESLESRAKTVKAIGQALQNHKEELADLMVKEMGKLPSQASQEVDLCTGICDYTAEHGPKKLADEERQPSNGERGFVTYSPMGVIYGIQPWNFPAYQVIRYSI 435
MSNSIKT+NP+NGETLE+Y LMSSAEAKQ+VD CYEAFLDWRLESLESRAKTVKAIGQALQ HKEELADLMV EMGKLPSQA QEVDLCTGICDYTAEHGPKKLADEERQP NGERGFVTYSPMGVIYGIQPWNFPAYQV+RYSI
Sbjct: 1 MSNSIKTINPTNGETLESYTLMSSAEAKQIVDACYEAFLDWRLESLESRAKTVKAIGQALQKHKEELADLMVNEMGKLPSQARQEVDLCTGICDYTAEHGPKKLADEERQPGNGERGFVTYSPMGVIYGIQPWNFPAYQVVRYSI 145
BLAST of mRNA_E-siliculosus-1a_F_contig12114.1351.1 vs. uniprot
Match: A0A455UB58_9GAMM (Aldedh domain-containing protein n=1 Tax=Halomonas sulfidaeris TaxID=115553 RepID=A0A455UB58_9GAMM) HSP 1 Score: 264 bits (675), Expect = 1.800e-88 Identity = 127/145 (87.59%), Postives = 137/145 (94.48%), Query Frame = 1
Query: 1 MSNSIKTVNPSNGETLETYALMSSAEAKQVVDDCYEAFLDWRLESLESRAKTVKAIGQALQNHKEELADLMVKEMGKLPSQASQEVDLCTGICDYTAEHGPKKLADEERQPSNGERGFVTYSPMGVIYGIQPWNFPAYQVIRYSI 435
MSNSI T+NP+NGETL+TY LM+S EAKQVVD CYEAFLDWRLESLE+RAKTVKAIGQALQ HK+EL DLMVKEMGKLPS+A QEVDLCTGICDYTAEHGP+KLADEERQPSNGERG V+YSPMGVIYGIQPWNFPAYQV+RYSI
Sbjct: 1 MSNSITTINPTNGETLDTYTLMNSDEAKQVVDACYEAFLDWRLESLENRAKTVKAIGQALQEHKDELVDLMVKEMGKLPSEARQEVDLCTGICDYTAEHGPEKLADEERQPSNGERGIVSYSPMGVIYGIQPWNFPAYQVVRYSI 145
BLAST of mRNA_E-siliculosus-1a_F_contig12114.1351.1 vs. uniprot
Match: A0A455V7X9_9GAMM (Aldedh domain-containing protein n=1 Tax=Halomonas axialensis TaxID=115555 RepID=A0A455V7X9_9GAMM) HSP 1 Score: 238 bits (608), Expect = 6.600e-76 Identity = 115/145 (79.31%), Postives = 126/145 (86.90%), Query Frame = 1
Query: 1 MSNSIKTVNPSNGETLETYALMSSAEAKQVVDDCYEAFLDWRLESLESRAKTVKAIGQALQNHKEELADLMVKEMGKLPSQASQEVDLCTGICDYTAEHGPKKLADEERQPSNGERGFVTYSPMGVIYGIQPWNFPAYQVIRYSI 435
MSNSI TVNP+ GETLETY LM ++AKQ+V+ +EAFLDWRL+ LE RAK VKAIG+A+ HKEEL DLMVKEMGKLPSQA EVDLC GICDYTAEHGP KLADEER+P NGERG VTYSPMGVIYGIQPWNFPAYQV+RYSI
Sbjct: 1 MSNSITTVNPTTGETLETYTLMDESQAKQIVEASHEAFLDWRLKPLEHRAKVVKAIGEAMNAHKEELTDLMVKEMGKLPSQARGEVDLCVGICDYTAEHGPTKLADEERKPGNGERGIVTYSPMGVIYGIQPWNFPAYQVVRYSI 145
BLAST of mRNA_E-siliculosus-1a_F_contig12114.1351.1 vs. uniprot
Match: A0A060B8W2_9GAMM (Succinate-semialdehyde dehydrogenase n=41 Tax=Halomonadaceae TaxID=28256 RepID=A0A060B8W2_9GAMM) HSP 1 Score: 234 bits (598), Expect = 3.500e-73 Identity = 113/145 (77.93%), Postives = 129/145 (88.97%), Query Frame = 1
Query: 1 MSNSIKTVNPSNGETLETYALMSSAEAKQVVDDCYEAFLDWRLESLESRAKTVKAIGQALQNHKEELADLMVKEMGKLPSQASQEVDLCTGICDYTAEHGPKKLADEERQPSNGERGFVTYSPMGVIYGIQPWNFPAYQVIRYSI 435
MSNSI TVNP+ GETLETYALM +++AKQ+V+ +EAFLDWRL+ LE RAK VKAIG+AL +K+ELA+LMV+EMGKLPSQA QEV+LC GICDYTA+HGP LADEER PSNGERG VTYSPMGVIYGIQPWNFPAYQV+RYSI
Sbjct: 1 MSNSITTVNPTTGETLETYALMDASQAKQIVEASHEAFLDWRLKPLEQRAKVVKAIGEALNANKDELAELMVEEMGKLPSQARQEVELCAGICDYTAKHGPTTLADEERNPSNGERGIVTYSPMGVIYGIQPWNFPAYQVVRYSI 145
BLAST of mRNA_E-siliculosus-1a_F_contig12114.1351.1 vs. uniprot
Match: A0A3S8YV54_9GAMM (NAD-dependent succinate-semialdehyde dehydrogenase n=6 Tax=Halomonas TaxID=2745 RepID=A0A3S8YV54_9GAMM) HSP 1 Score: 233 bits (595), Expect = 9.870e-73 Identity = 113/145 (77.93%), Postives = 128/145 (88.28%), Query Frame = 1
Query: 1 MSNSIKTVNPSNGETLETYALMSSAEAKQVVDDCYEAFLDWRLESLESRAKTVKAIGQALQNHKEELADLMVKEMGKLPSQASQEVDLCTGICDYTAEHGPKKLADEERQPSNGERGFVTYSPMGVIYGIQPWNFPAYQVIRYSI 435
MSNSI TVNP+ GETLETYALM +++AKQ+V+ +EAFLDWRL+ LE RAK VKAIG+AL +KEELA+LMV EMGKLPSQA QEV+LC GICDYTA+HGP LADE+R PSNGERG VTYSPMGVIYGIQPWNFPAYQV+RYSI
Sbjct: 1 MSNSITTVNPATGETLETYALMDASQAKQIVEASHEAFLDWRLKPLEQRAKVVKAIGEALNANKEELAELMVNEMGKLPSQARQEVELCAGICDYTAKHGPTILADEQRNPSNGERGIVTYSPMGVIYGIQPWNFPAYQVVRYSI 145
BLAST of mRNA_E-siliculosus-1a_F_contig12114.1351.1 vs. uniprot
Match: A0A0N8KJ86_9GAMM (Succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase n=6 Tax=Halomonas TaxID=2745 RepID=A0A0N8KJ86_9GAMM) HSP 1 Score: 231 bits (588), Expect = 1.110e-71 Identity = 113/145 (77.93%), Postives = 125/145 (86.21%), Query Frame = 1
Query: 1 MSNSIKTVNPSNGETLETYALMSSAEAKQVVDDCYEAFLDWRLESLESRAKTVKAIGQALQNHKEELADLMVKEMGKLPSQASQEVDLCTGICDYTAEHGPKKLADEERQPSNGERGFVTYSPMGVIYGIQPWNFPAYQVIRYSI 435
MSNSI TVNP+ GETLETYALM +++A QVV+ ++AFLDWRL+ LE RAK VKAIG+AL+ HKEELAD MVKEMGKLP QA QEVDLC GICDYTA GP+ LADE R PSNGERG VTYSPMGVIYGIQPWNFPAYQV+RYSI
Sbjct: 1 MSNSITTVNPTTGETLETYALMDASQAIQVVEASHQAFLDWRLKPLEHRAKVVKAIGEALKAHKEELADFMVKEMGKLPEQAYQEVDLCVGICDYTAARGPESLADETRSPSNGERGIVTYSPMGVIYGIQPWNFPAYQVVRYSI 145
BLAST of mRNA_E-siliculosus-1a_F_contig12114.1351.1 vs. uniprot
Match: Q5QZY1_IDILO (NAD-dependent aldehyde dehydrogenase n=2 Tax=Idiomarinaceae TaxID=267893 RepID=Q5QZY1_IDILO) HSP 1 Score: 230 bits (587), Expect = 1.560e-71 Identity = 106/145 (73.10%), Postives = 125/145 (86.21%), Query Frame = 1
Query: 1 MSNSIKTVNPSNGETLETYALMSSAEAKQVVDDCYEAFLDWRLESLESRAKTVKAIGQALQNHKEELADLMVKEMGKLPSQASQEVDLCTGICDYTAEHGPKKLADEERQPSNGERGFVTYSPMGVIYGIQPWNFPAYQVIRYSI 435
MSN I T+NPSNGE L++Y M AE Q++++ + AFL WRLESLE RAK+VKAIG+ALQ HKEE ADLMVKEMGKLP QA QE+DLC GICDYTAEHGP++LADEER+P NG+RG VTYSP+G++YGIQPWNFPAYQV+RYSI
Sbjct: 1 MSNQITTINPSNGEQLKSYTKMDLAEVTQIIEESHAAFLQWRLESLEQRAKSVKAIGKALQEHKEEFADLMVKEMGKLPEQARQEIDLCVGICDYTAEHGPEELADEERKPGNGQRGIVTYSPIGIVYGIQPWNFPAYQVVRYSI 145
BLAST of mRNA_E-siliculosus-1a_F_contig12114.1351.1 vs. uniprot
Match: H0J5L1_9GAMM (NAD-dependent aldehyde dehydrogenase n=10 Tax=Halomonas TaxID=2745 RepID=H0J5L1_9GAMM) HSP 1 Score: 228 bits (581), Expect = 1.240e-70 Identity = 108/145 (74.48%), Postives = 125/145 (86.21%), Query Frame = 1
Query: 1 MSNSIKTVNPSNGETLETYALMSSAEAKQVVDDCYEAFLDWRLESLESRAKTVKAIGQALQNHKEELADLMVKEMGKLPSQASQEVDLCTGICDYTAEHGPKKLADEERQPSNGERGFVTYSPMGVIYGIQPWNFPAYQVIRYSI 435
MSNSI TVNPS GETL TY LM +++AKQVV+ Y+AFLDWRL+ LE RA VKAIG+AL HKEELA+L+V+EMGK P +A QE+DLC GICDYTAEHGP +LADEER+P NG+RG +TYSPMGVIYGIQPWNFPAYQV+RYSI
Sbjct: 1 MSNSITTVNPSTGETLATYTLMDASQAKQVVEASYQAFLDWRLKPLEHRASVVKAIGEALSAHKEELAELIVQEMGKPPEEARQEIDLCAGICDYTAEHGPTELADEERKPGNGKRGIITYSPMGVIYGIQPWNFPAYQVVRYSI 145
BLAST of mRNA_E-siliculosus-1a_F_contig12114.1351.1 vs. uniprot
Match: UPI001D0A75EF (NAD-dependent succinate-semialdehyde dehydrogenase n=1 Tax=Halomonas malpeensis TaxID=1172368 RepID=UPI001D0A75EF) HSP 1 Score: 213 bits (542), Expect = 8.470e-65 Identity = 100/145 (68.97%), Postives = 121/145 (83.45%), Query Frame = 1
Query: 1 MSNSIKTVNPSNGETLETYALMSSAEAKQVVDDCYEAFLDWRLESLESRAKTVKAIGQALQNHKEELADLMVKEMGKLPSQASQEVDLCTGICDYTAEHGPKKLADEERQPSNGERGFVTYSPMGVIYGIQPWNFPAYQVIRYSI 435
MSNSI TVNP+ GE LETY+LM ++A ++V+ ++AFL WRL+SL+ RA +KAIG+AL ++KE A L+V EMGK P +A QE+DLC GICDYTAE+GPKKLADEER+P NGERG VTYSPMGVIYGIQPWNFPAYQ +RYSI
Sbjct: 1 MSNSITTVNPATGENLETYSLMDESKAIEIVEQSHQAFLQWRLKSLDERANVIKAIGKALADNKEAFAKLIVDEMGKPPEEARQEIDLCVGICDYTAENGPKKLADEERKPGNGERGIVTYSPMGVIYGIQPWNFPAYQAVRYSI 145 The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig12114.1351.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-siliculosus-1a_F_contig12114.1351.1 >prot_E-siliculosus-1a_F_contig12114.1351.1 ID=prot_E-siliculosus-1a_F_contig12114.1351.1|Name=mRNA_E-siliculosus-1a_F_contig12114.1351.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=145bp MSNSIKTVNPSNGETLETYALMSSAEAKQVVDDCYEAFLDWRLESLESRAback to top mRNA from alignment at E-siliculosus-1a_F_contig12114:1267..1701+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-siliculosus-1a_F_contig12114.1351.1 ID=mRNA_E-siliculosus-1a_F_contig12114.1351.1|Name=mRNA_E-siliculosus-1a_F_contig12114.1351.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=435bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig12114:1267..1701+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top Coding sequence (CDS) from alignment at E-siliculosus-1a_F_contig12114:1267..1701+ >mRNA_E-siliculosus-1a_F_contig12114.1351.1 ID=mRNA_E-siliculosus-1a_F_contig12114.1351.1|Name=mRNA_E-siliculosus-1a_F_contig12114.1351.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=870bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig12114:1267..1701+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top |