mRNA_E-siliculosus-1a_F_contig12114.1350.1 (mRNA) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E-siliculosus-1a_F_contig12114.1350.1
Unique NamemRNA_E-siliculosus-1a_F_contig12114.1350.1
TypemRNA
OrganismEctocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Homology
[Close]
BLAST of mRNA_E-siliculosus-1a_F_contig12114.1350.1 vs. uniprot
Match: A0A653VVL0_9GAMM (Alcohol dehydrogenase, class IV n=6 Tax=root TaxID=1 RepID=A0A653VVL0_9GAMM)

HSP 1 Score: 469 bits (1206), Expect = 6.200e-164
Identity = 245/276 (88.77%), Postives = 263/276 (95.29%), Query Frame = 1 
Query:    1 MQVNNVSHVSSFKSAGKLVTGYGAAQKLQLYVQSLGMQCPLIVTDAGVVASGTLEIITEQLHELNVAYAVFDEVTPEPEVEIVEHCARAFNNGKHDSVIAVGGGSAMDIAKCVAVYARCDGPLESLFGENKVAQREVPLIAMPTTAGTGSEVTNIAILSDKAQQMKKGIVSDCLLPDVAIVAPELTLSCPRSVTAASGVDALVHAVEAYLSNFATPITDALAVKAMNLIVHALPKAFANPNHRQAREDMATGSLLAGLAFGNAGVGAVHALAYPLG 828
            MQ+++++ VSSFKSAGKL+TG+GAAQ+LQ YVQ+LGM+CPL+VTD+GVVASGTLEIITEQL  LNV Y VFD+VTPEPEVEIVE C RAF  G++DSVIA+GGGSAMDIAKCVAVYAR +GPLE LFGENKVA+REVPLIAMPTTAGTGSEVTNIAILSDKAQQMKKGIVSDCLLPDVAIVAPELTLSCPRSVTAASGVDALVHAVEAYLSNFATPITDALAVKAMNLIVHALPKAFANPNH QAREDMATGSLLAGLAFGNAGVGAVHALAYPLG
Sbjct:    1 MQLSSLNRVSSFKSAGKLITGHGAAQQLQSYVQTLGMKCPLLVTDSGVVASGTLEIITEQLMALNVTYEVFDQVTPEPEVEIVEICTRAFIAGQYDSVIAIGGGSAMDIAKCVAVYARYEGPLEGLFGENKVARREVPLIAMPTTAGTGSEVTNIAILSDKAQQMKKGIVSDCLLPDVAIVAPELTLSCPRSVTAASGVDALVHAVEAYLSNFATPITDALAVKAMNLIVHALPKAFANPNHLQAREDMATGSLLAGLAFGNAGVGAVHALAYPLG 276
[Close]
BLAST of mRNA_E-siliculosus-1a_F_contig12114.1350.1 vs. uniprot
Match: A0A0D7V0A5_9GAMM (Alcohol dehydrogenase n=12 Tax=Halomonadaceae TaxID=28256 RepID=A0A0D7V0A5_9GAMM)

HSP 1 Score: 465 bits (1197), Expect = 1.450e-162
Identity = 245/276 (88.77%), Postives = 261/276 (94.57%), Query Frame = 1 
Query:    1 MQVNNVSHVSSFKSAGKLVTGYGAAQKLQLYVQSLGMQCPLIVTDAGVVASGTLEIITEQLHELNVAYAVFDEVTPEPEVEIVEHCARAFNNGKHDSVIAVGGGSAMDIAKCVAVYARCDGPLESLFGENKVAQREVPLIAMPTTAGTGSEVTNIAILSDKAQQMKKGIVSDCLLPDVAIVAPELTLSCPRSVTAASGVDALVHAVEAYLSNFATPITDALAVKAMNLIVHALPKAFANPNHRQAREDMATGSLLAGLAFGNAGVGAVHALAYPLG 828
            MQ+++ + VSSFKSAGKL+TG+GAAQ+LQLYVQSLGMQ PLIVTD+GVVASGTL++ITEQL  L V+Y VFD+VTPEPEVEIVE C RAFN GKHDSVIAVGGGSAMDIAKCVAVYA  +GPLE+LFGENKV QR +PLIAMPTTAGTGSEVTNIAILSDKAQQMKKGIVSDCLLPDVAIVAPELTLSCPRSVTAASGVDALVHAVEAYLSNFATPITDALAVKAMNLIVHALPKAFANPN+ QAREDMATGSLLAGLAFGNAGVGAVHALAYPLG
Sbjct:    1 MQLSSFNQVSSFKSAGKLITGHGAAQQLQLYVQSLGMQRPLIVTDSGVVASGTLDMITEQLTALKVSYEVFDQVTPEPEVEIVEMCTRAFNAGKHDSVIAVGGGSAMDIAKCVAVYAHYEGPLEALFGENKVDQRTIPLIAMPTTAGTGSEVTNIAILSDKAQQMKKGIVSDCLLPDVAIVAPELTLSCPRSVTAASGVDALVHAVEAYLSNFATPITDALAVKAMNLIVHALPKAFANPNNLQAREDMATGSLLAGLAFGNAGVGAVHALAYPLG 276
[Close]
BLAST of mRNA_E-siliculosus-1a_F_contig12114.1350.1 vs. uniprot
Match: A0A6M1S4A9_HALSX (Iron-containing alcohol dehydrogenase n=2 Tax=Halomonas TaxID=2745 RepID=A0A6M1S4A9_HALSX)

HSP 1 Score: 427 bits (1098), Expect = 1.470e-147
Identity = 231/276 (83.70%), Postives = 246/276 (89.13%), Query Frame = 1 
Query:    1 MQVNNVSHVSSFKSAGKLVTGYGAAQKLQLYVQSLGMQCPLIVTDAGVVASGTLEIITEQLHELNVAYAVFDEVTPEPEVEIVEHCARAFNNGKHDSVIAVGGGSAMDIAKCVAVYARCDGPLESLFGENKVAQREVPLIAMPTTAGTGSEVTNIAILSDKAQQMKKGIVSDCLLPDVAIVAPELTLSCPRSVTAASGVDALVHAVEAYLSNFATPITDALAVKAMNLIVHALPKAFANPNHRQAREDMATGSLLAGLAFGNAGVGAVHALAYPLG 828
            MQ+N V   SSFKSAGKL+TG GA+++L L+VQ+LGMQ PLIVTDAGVVASGTLE +T QL  L ++  VFD VTPEPEV IVE C   F + +HDSVIAVGGGSAMDIAKCVAVYAR +GPLE+LFGE +V QREVPLIAMPTTAGTGSEVTNIAILSDK QQMKKGIVSDCLLPDVAIVAPELTLSCPRSVTAASGVDALVHAVEAYLSNFATPITDALAVKAM LIV ALPKAFANP H QAREDMATGSLLAGLAFGNAGVGAVHALAYPLG
Sbjct:    1 MQLNRV---SSFKSAGKLITGQGASEQLGLHVQALGMQNPLIVTDAGVVASGTLEGVTRQLQALGLSCGVFDGVTPEPEVAIVETCTEVFVSDQHDSVIAVGGGSAMDIAKCVAVYARHEGPLEALFGEQQVRQREVPLIAMPTTAGTGSEVTNIAILSDKVQQMKKGIVSDCLLPDVAIVAPELTLSCPRSVTAASGVDALVHAVEAYLSNFATPITDALAVKAMGLIVSALPKAFANPQHLQAREDMATGSLLAGLAFGNAGVGAVHALAYPLG 273
[Close]
BLAST of mRNA_E-siliculosus-1a_F_contig12114.1350.1 vs. uniprot
Match: A0A5C1NB92_9GAMM (Iron-containing alcohol dehydrogenase n=1 Tax=Halomonas sp. Y2R2 TaxID=2562282 RepID=A0A5C1NB92_9GAMM)

HSP 1 Score: 384 bits (986), Expect = 1.280e-130
Identity = 202/268 (75.37%), Postives = 231/268 (86.19%), Query Frame = 1 
Query:   25 VSSFKSAGKLVTGYGAAQKLQLYVQSLGMQCPLIVTDAGVVASGTLEIITEQLHELNVAYAVFDEVTPEPEVEIVEHCARAFNNGKHDSVIAVGGGSAMDIAKCVAVYARCDGPLESLFGENKVAQREVPLIAMPTTAGTGSEVTNIAILSDKAQQMKKGIVSDCLLPDVAIVAPELTLSCPRSVTAASGVDALVHAVEAYLSNFATPITDALAVKAMNLIVHALPKAFANPNHRQAREDMATGSLLAGLAFGNAGVGAVHALAYPLG 828
            VS+FKSA +L+TGY A+ +L   VQ LGMQ PL++TD GV+ SGTL++IT+QL+ ++  YA++D VTPEPEV IVE C   F  G+HD +IAVGGGSAMDIAKCVAVYA+ DGPL  LFGE +V QR +PLIA+PTTAGTGSEVTNI+ILSD  QQMKKGIVSD LLPDVAIVAPE++ SCPRSVTAASGVDALVHA+EAYLSNFATPITDALA KAM LI+ ALPKAFANP + QAREDMATGSL+AGLAFGNAGVGAVHALAYPLG
Sbjct:    3 VSNFKSAHRLITGYQASSELWPQVQRLGMQRPLVITDRGVLQSGTLKLITDQLNAVD--YAIYDGVTPEPEVAIVEACTDTFRTGEHDGLIAVGGGSAMDIAKCVAVYAQHDGPLHELFGEGQVRQRNIPLIAIPTTAGTGSEVTNISILSDAEQQMKKGIVSDHLLPDVAIVAPEMSQSCPRSVTAASGVDALVHAIEAYLSNFATPITDALATKAMELIIRALPKAFANPENIQAREDMATGSLMAGLAFGNAGVGAVHALAYPLG 268
[Close]
BLAST of mRNA_E-siliculosus-1a_F_contig12114.1350.1 vs. uniprot
Match: A0A1B8P799_HALEL (NAD-dependent methanol dehydrogenase n=5 Tax=Halomonas TaxID=2745 RepID=A0A1B8P799_HALEL)

HSP 1 Score: 371 bits (953), Expect = 1.310e-125
Identity = 195/269 (72.49%), Postives = 228/269 (84.76%), Query Frame = 1 
Query:   22 HVSSFKSAGKLVTGYGAAQKLQLYVQSLGMQCPLIVTDAGVVASGTLEIITEQLHELNVAYAVFDEVTPEPEVEIVEHCARAFNNGKHDSVIAVGGGSAMDIAKCVAVYARCDGPLESLFGENKVAQREVPLIAMPTTAGTGSEVTNIAILSDKAQQMKKGIVSDCLLPDVAIVAPELTLSCPRSVTAASGVDALVHAVEAYLSNFATPITDALAVKAMNLIVHALPKAFANPNHRQAREDMATGSLLAGLAFGNAGVGAVHALAYPLG 828
            HVSSFK+A +L+TG  A+Q L   V  LGMQ PL+VTD GV  SGTL+++T ++ +L   YA++D V  EPE+EIVE C +AF +G+HD +IAVGGGSAMDIAKCV+VYAR  G L++LFGE+KV    VPLIA+PTTAGTGSEVTNIAIL+D  Q  K+GIVSD LLPDVA+VAPE+TLSCPRSVTAASGVDALVHA+EAYLSNFA+P+TDALA+KAM LIV ALPKAFANPN+  AREDMATGSL+AGLAFGNAGVGAVHALAYPLG
Sbjct:    2 HVSSFKTAHRLITGQQASQDLLAQVSRLGMQKPLLVTDRGVRESGTLDLVTSRVKDLG--YAIYDRVPREPEIEIVEECTQAFRHGEHDGLIAVGGGSAMDIAKCVSVYARYSGTLDTLFGEDKVESSGVPLIAIPTTAGTGSEVTNIAILADNRQGTKRGIVSDYLLPDVALVAPEMTLSCPRSVTAASGVDALVHAIEAYLSNFASPLTDALALKAMTLIVRALPKAFANPNNLAAREDMATGSLMAGLAFGNAGVGAVHALAYPLG 268
[Close]
BLAST of mRNA_E-siliculosus-1a_F_contig12114.1350.1 vs. uniprot
Match: A0A7C1NQ15_9GAMM (Iron-containing alcohol dehydrogenase n=1 Tax=Porticoccus sp. TaxID=2024853 RepID=A0A7C1NQ15_9GAMM)

HSP 1 Score: 370 bits (950), Expect = 3.730e-125
Identity = 195/268 (72.76%), Postives = 226/268 (84.33%), Query Frame = 1 
Query:   25 VSSFKSAGKLVTGYGAAQKLQLYVQSLGMQCPLIVTDAGVVASGTLEIITEQLHELNVAYAVFDEVTPEPEVEIVEHCARAFNNGKHDSVIAVGGGSAMDIAKCVAVYARCDGPLESLFGENKVAQREVPLIAMPTTAGTGSEVTNIAILSDKAQQMKKGIVSDCLLPDVAIVAPELTLSCPRSVTAASGVDALVHAVEAYLSNFATPITDALAVKAMNLIVHALPKAFANPNHRQAREDMATGSLLAGLAFGNAGVGAVHALAYPLG 828
            VSSFKSA +L+TG GAAQ+L   +  LG++ P IVTD GV  SGTL IIT+QL E +  YA++D ++PEPEV +V+ C  AF  G+HD V+AVGGGSAMD AKCVAV A   G LESLFGE+ V+QR +PLIA+PTTAGTGSEVTNIAILSD   Q+K+GIVSD LLPDVAIV+PE+TLSCPR VTAASGVDALVHAVEAYLSNF++PITDALA+KAM LI+HALPKA++ P + QAREDMATGSLLAGLAFGNAGVGAVHALAYPLG
Sbjct:    3 VSSFKSAHQLITGKGAAQELAEQLSKLGVENPFIVTDKGVSNSGTLAIITDQLSENS--YAIYDNISPEPEVSVVQACVDAFQQGRHDGVVAVGGGSAMDTAKCVAVMAEHTGDLESLFGEHAVSQRSIPLIAIPTTAGTGSEVTNIAILSDPEAQIKRGIVSDFLLPDVAIVSPEMTLSCPRGVTAASGVDALVHAVEAYLSNFSSPITDALAIKAMTLIIHALPKAYSEPQNHQAREDMATGSLLAGLAFGNAGVGAVHALAYPLG 268
[Close]
BLAST of mRNA_E-siliculosus-1a_F_contig12114.1350.1 vs. uniprot
Match: A0A558HPY3_9GAMM (Iron-containing alcohol dehydrogenase n=5 Tax=Cobetia TaxID=204286 RepID=A0A558HPY3_9GAMM)

HSP 1 Score: 367 bits (943), Expect = 5.430e-124
Identity = 196/273 (71.79%), Postives = 224/273 (82.05%), Query Frame = 1 
Query:   25 VSSFKSAGKLVTGYGAAQKLQLYVQSLGMQCPLIVTDAGVVASGTLEIITEQLHELNVA-----YAVFDEVTPEPEVEIVEHCARAFNNGKHDSVIAVGGGSAMDIAKCVAVYARCDGPLESLFGENKVAQREVPLIAMPTTAGTGSEVTNIAILSDKAQQMKKGIVSDCLLPDVAIVAPELTLSCPRSVTAASGVDALVHAVEAYLSNFATPITDALAVKAMNLIVHALPKAFANPNHRQAREDMATGSLLAGLAFGNAGVGAVHALAYPLG 828
            ++SFKSA +L+TG  A+++L   +  LGM+CPL+VTD GV+ASGTL+ IT+QL  L        Y +F EV+ EPEV +VE C   +   K DS+IAVGGGSAMDIAKCVAVYA  DG LESLFGENK   R  PLIAMPTTAGTGSEVTNI ILSD   +MKKGIV+D LLPDVAIVAPELT+SCPR VTAASGVDALVHA+EAYLSNFATPITDALA+KAM LI+ ALPKA+ANPN+ +AREDMATGSLLAG+AFGNAGVGAVHALAYPLG
Sbjct:    3 IASFKSANRLITGQQASERLSEEIVRLGMRCPLLVTDPGVLASGTLKPITDQLDALKAKGQLAHYRIFSEVSAEPEVHVVEDCMSIYLEAKSDSLIAVGGGSAMDIAKCVAVYATHDGDLESLFGENKAKVRGAPLIAMPTTAGTGSEVTNIGILSDTVAKMKKGIVNDYLLPDVAIVAPELTVSCPRHVTAASGVDALVHAIEAYLSNFATPITDALAIKAMRLIIKALPKAYANPNNLKAREDMATGSLLAGMAFGNAGVGAVHALAYPLG 275
[Close]
BLAST of mRNA_E-siliculosus-1a_F_contig12114.1350.1 vs. uniprot
Match: A0A2A5GBY6_9GAMM (Alcohol dehydrogenase n=1 Tax=Porticoccaceae bacterium TaxID=2026782 RepID=A0A2A5GBY6_9GAMM)

HSP 1 Score: 354 bits (909), Expect = 6.180e-119
Identity = 189/268 (70.52%), Postives = 220/268 (82.09%), Query Frame = 1 
Query:   25 VSSFKSAGKLVTGYGAAQKLQLYVQSLGMQCPLIVTDAGVVASGTLEIITEQLHELNVAYAVFDEVTPEPEVEIVEHCARAFNNGKHDSVIAVGGGSAMDIAKCVAVYARCDGPLESLFGENKVAQREVPLIAMPTTAGTGSEVTNIAILSDKAQQMKKGIVSDCLLPDVAIVAPELTLSCPRSVTAASGVDALVHAVEAYLSNFATPITDALAVKAMNLIVHALPKAFANPNHRQAREDMATGSLLAGLAFGNAGVGAVHALAYPLG 828
            VS FKSA +L+TG GAAQ+L   ++ L +  P+IVTD GV  SGTL I T+QL E    Y V+D + PEPEV +V+ C  AF  G HD ++AVGGGSA+DIAKCVAV     G L+SLFGEN V+ R +PLIA+PTTAGTGSEVTNIAILSD   ++K+GIVSD LLPDVAIVAPE+TLSCPRSVTAASGVDALVHA+EAYLSNF++PITDALA+KAM LI++ALPK FA P++ QAREDMATGSLLAGLAFGNAGVGAVHALAYPLG
Sbjct:    3 VSRFKSANQLITGKGAAQELVEQLRKLAINNPMIVTDKGVRNSGTLAIXTDQLXENT--YTVYDNIPPEPEVSVVKACTDAFKQGGHDGLVAVGGGSAIDIAKCVAVMVEHSGELDSLFGENNVSHRGIPLIAIPTTAGTGSEVTNIAILSDPEARIKRGIVSDFLLPDVAIVAPEMTLSCPRSVTAASGVDALVHALEAYLSNFSSPITDALAIKAMTLIINALPKVFAKPDNLQAREDMATGSLLAGLAFGNAGVGAVHALAYPLG 268
[Close]
BLAST of mRNA_E-siliculosus-1a_F_contig12114.1350.1 vs. uniprot
Match: A0A2E4Q218_9GAMM (Alcohol dehydrogenase n=5 Tax=Bacteria TaxID=2 RepID=A0A2E4Q218_9GAMM)

HSP 1 Score: 354 bits (909), Expect = 7.780e-119
Identity = 192/273 (70.33%), Postives = 218/273 (79.85%), Query Frame = 1 
Query:   25 VSSFKSAGKLVTGYGAAQKLQLYVQSLGMQCPLIVTDAGVVASGTLEIITEQLHELNVA-----YAVFDEVTPEPEVEIVEHCARAFNNGKHDSVIAVGGGSAMDIAKCVAVYARCDGPLESLFGENKVAQREVPLIAMPTTAGTGSEVTNIAILSDKAQQMKKGIVSDCLLPDVAIVAPELTLSCPRSVTAASGVDALVHAVEAYLSNFATPITDALAVKAMNLIVHALPKAFANPNHRQAREDMATGSLLAGLAFGNAGVGAVHALAYPLG 828
            ++SFKSA +L+TG  A+ +L   V  LGM  P++VTD GV+ SGTLE I  QL +L        Y +F +V+ EPEV IVE C  ++  G  DS+IAVGGGSAMDIAKCVAVYA  DG LESLFGENK   R  PLIAMPTT+GTGSEVTNI ILSD   +MKKGIV+D LLPDVAIVAPELT+SCPR VTAASGVDALVHA+EAYLSNFATPITDALA+KAM LI+ ALPKA+ANP   +AREDMATGSLLAG+AFGNAGVGAVHALAYPLG
Sbjct:    3 IASFKSANRLITGQQASTRLAEEVMRLGMHSPMLVTDPGVLGSGTLEPIKAQLDDLKTRGHLTDYRIFSDVSAEPEVHIVEDCMSSYREGGCDSLIAVGGGSAMDIAKCVAVYATHDGDLESLFGENKARVRGAPLIAMPTTSGTGSEVTNIGILSDTEARMKKGIVNDYLLPDVAIVAPELTVSCPRHVTAASGVDALVHAIEAYLSNFATPITDALAIKAMRLIIKALPKAYANPADLKAREDMATGSLLAGMAFGNAGVGAVHALAYPLG 275
[Close]
BLAST of mRNA_E-siliculosus-1a_F_contig12114.1350.1 vs. uniprot
Match: A0A432W3Y3_9GAMM (Alcohol dehydrogenase n=1 Tax=Aliidiomarina minuta TaxID=880057 RepID=A0A432W3Y3_9GAMM)

HSP 1 Score: 345 bits (885), Expect = 2.600e-115
Identity = 184/268 (68.66%), Postives = 218/268 (81.34%), Query Frame = 1 
Query:   25 VSSFKSAGKLVTGYGAAQKLQLYVQSLGMQCPLIVTDAGVVASGTLEIITEQLHELNVAYAVFDEVTPEPEVEIVEHCARAFNNGKHDSVIAVGGGSAMDIAKCVAVYARCDGPLESLFGENKVAQREVPLIAMPTTAGTGSEVTNIAILSDKAQQMKKGIVSDCLLPDVAIVAPELTLSCPRSVTAASGVDALVHAVEAYLSNFATPITDALAVKAMNLIVHALPKAFANPNHRQAREDMATGSLLAGLAFGNAGVGAVHALAYPLG 828
            +++FKSA +L+TG  ++Q+    +  LG+  P IVTD GV  SGTL++IT Q    NV   ++DEV  EPEV +VEHCA AFN GKHD V+AVGGGSAMDIAK +AV+A  + PL   FGEN    R++PLI +PTTAGTGSEVTNIAIL+D   Q+KKGIVSD LLPDVAIV+PE+TLSCPRSVTAASGVDALVHA+EAYLSNFA+P+TDALA+KAM++I  ALPK  ANP+H QARE+MATGSLLAGLAFGNAGVGAVHALAYPLG
Sbjct:    3 IATFKSAHRLITGAQSSQQTATELAKLGVSNPFIVTDKGVRQSGTLDLITAQFKH-NVT--IYDEVPAEPEVSVVEHCAEAFNQGKHDGVLAVGGGSAMDIAKVIAVFAGQNKPLLEFFGENNAPTRKLPLITLPTTAGTGSEVTNIAILADTENQIKKGIVSDQLLPDVAIVSPEMTLSCPRSVTAASGVDALVHAIEAYLSNFASPVTDALAIKAMSMIRVALPKVVANPHHLQAREEMATGSLLAGLAFGNAGVGAVHALAYPLG 267
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig12114.1350.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A653VVL0_9GAMM6.200e-16488.77Alcohol dehydrogenase, class IV n=6 Tax=root TaxID... [more]
A0A0D7V0A5_9GAMM1.450e-16288.77Alcohol dehydrogenase n=12 Tax=Halomonadaceae TaxI... [more]
A0A6M1S4A9_HALSX1.470e-14783.70Iron-containing alcohol dehydrogenase n=2 Tax=Halo... [more]
A0A5C1NB92_9GAMM1.280e-13075.37Iron-containing alcohol dehydrogenase n=1 Tax=Halo... [more]
A0A1B8P799_HALEL1.310e-12572.49NAD-dependent methanol dehydrogenase n=5 Tax=Halom... [more]
A0A7C1NQ15_9GAMM3.730e-12572.76Iron-containing alcohol dehydrogenase n=1 Tax=Port... [more]
A0A558HPY3_9GAMM5.430e-12471.79Iron-containing alcohol dehydrogenase n=5 Tax=Cobe... [more]
A0A2A5GBY6_9GAMM6.180e-11970.52Alcohol dehydrogenase n=1 Tax=Porticoccaceae bacte... [more]
A0A2E4Q218_9GAMM7.780e-11970.33Alcohol dehydrogenase n=5 Tax=Bacteria TaxID=2 Rep... [more]
A0A432W3Y3_9GAMM2.600e-11568.66Alcohol dehydrogenase n=1 Tax=Aliidiomarina minuta... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_F_contig12114contigE-siliculosus-1a_F_contig12114:1..828 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef902022-09-19
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female2021-02-24
Properties
Property NameValue
Start1
Stop0
Cds size828
Model size828
Exons1
Hectar predicted targeting categoryother localisation
BRITEko00000,ko01000
Best eggNOG OGNA|NA|NA
Best tax levelOceanospirillales
COG Functional cat.C
EggNOG OGs1MVPH@1224,1RMVU@1236,1XIS5@135619,COG1454@1,COG1454@2
EggNOG free text desc.alcohol dehydrogenase
KEGG koko:K19954
Preferred nameeutG
Seed eggNOG ortholog768066.HELO_1306
Seed ortholog evalue2.4e-102
Seed ortholog score378.6
Taxonomic scopeBacteria
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927731.3985696-CDS-E-siliculosus-1a_F_contig12114:0..8281622927731.3985696-CDS-E-siliculosus-1a_F_contig12114:0..828Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig12114 1..828 -
1696318658.2880254-CDS-E-siliculosus-1a_F_contig12114:0..8281696318658.2880254-CDS-E-siliculosus-1a_F_contig12114:0..828Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig12114 1..828 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_F_contig12114.1350.1prot_E-siliculosus-1a_F_contig12114.1350.1Ectocarpus siliculosus Ec863f_EcPH12_90f femalepolypeptideE-siliculosus-1a_F_contig12114 1..828 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E-siliculosus-1a_F_contig12114.1350.1

>prot_E-siliculosus-1a_F_contig12114.1350.1 ID=prot_E-siliculosus-1a_F_contig12114.1350.1|Name=mRNA_E-siliculosus-1a_F_contig12114.1350.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=276bp
MQVNNVSHVSSFKSAGKLVTGYGAAQKLQLYVQSLGMQCPLIVTDAGVVA
SGTLEIITEQLHELNVAYAVFDEVTPEPEVEIVEHCARAFNNGKHDSVIA
VGGGSAMDIAKCVAVYARCDGPLESLFGENKVAQREVPLIAMPTTAGTGS
EVTNIAILSDKAQQMKKGIVSDCLLPDVAIVAPELTLSCPRSVTAASGVD
ALVHAVEAYLSNFATPITDALAVKAMNLIVHALPKAFANPNHRQAREDMA
TGSLLAGLAFGNAGVGAVHALAYPLG
back to top

mRNA from alignment at E-siliculosus-1a_F_contig12114:1..828-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E-siliculosus-1a_F_contig12114.1350.1 ID=mRNA_E-siliculosus-1a_F_contig12114.1350.1|Name=mRNA_E-siliculosus-1a_F_contig12114.1350.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=828bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig12114:1..828- (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
ATGCAAGTAAATAATGTAAGTCACGTAAGTAGCTTTAAAAGTGCTGGCAA
ATTGGTCACCGGTTATGGGGCTGCCCAGAAGTTGCAGTTATATGTGCAGT
CGTTAGGCATGCAGTGCCCGCTAATCGTTACCGACGCTGGTGTTGTGGCT
TCTGGCACGCTAGAGATCATCACCGAGCAGCTCCATGAGCTGAATGTGGC
CTATGCAGTGTTTGATGAGGTTACGCCGGAACCTGAGGTTGAGATTGTCG
AGCACTGCGCCCGTGCTTTTAATAATGGCAAGCACGATAGCGTTATTGCG
GTAGGTGGCGGTAGTGCGATGGATATTGCCAAATGCGTAGCGGTCTACGC
GCGCTGTGACGGTCCGCTGGAGAGTCTATTCGGTGAGAATAAAGTGGCCC
AGCGCGAAGTGCCTTTAATCGCTATGCCGACGACAGCGGGCACGGGCTCT
GAAGTGACCAACATCGCGATCTTATCGGACAAAGCCCAGCAAATGAAAAA
GGGCATTGTAAGTGACTGCTTATTGCCGGATGTGGCTATTGTTGCTCCTG
AATTGACACTTAGCTGCCCGCGCTCTGTGACGGCTGCCAGTGGGGTTGAT
GCGCTGGTGCATGCAGTGGAAGCCTATCTCTCTAATTTCGCTACGCCGAT
AACGGATGCCTTAGCGGTTAAGGCGATGAATCTGATCGTGCATGCGCTGC
CTAAGGCATTCGCTAACCCTAACCATCGTCAAGCCCGCGAGGACATGGCC
ACTGGCAGCCTGTTAGCAGGGCTTGCATTTGGTAATGCTGGCGTAGGAGC
GGTGCATGCGCTGGCGTACCCACTAGGT
back to top

Coding sequence (CDS) from alignment at E-siliculosus-1a_F_contig12114:1..828-

>mRNA_E-siliculosus-1a_F_contig12114.1350.1 ID=mRNA_E-siliculosus-1a_F_contig12114.1350.1|Name=mRNA_E-siliculosus-1a_F_contig12114.1350.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=1656bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig12114:1..828- (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
ATGCAAGTAAATAATGTAAGTCACGTAAGTAGCTTTAAAAGTGCTGGCAA
ATTGGTCACCGGTTATGGGGCTGCCCAGAAGTTGCAGTTATATGTGCAGT
CGTTAGGCATGCAGTGCCCGCTAATCGTTACCGACGCTGGTGTTGTGGCT
TCTGGCACGCTAGAGATCATCACCGAGCAGCTCCATGAGCTGAATGTGGC
CTATGCAGTGTTTGATGAGGTTACGCCGGAACCTGAGGTTGAGATTGTCG
AGCACTGCGCCCGTGCTTTTAATAATGGCAAGCACGATAGCGTTATTGCG
GTAGGTGGCGGTAGTGCGATGGATATTGCCAAATGCGTAGCGGTCTACGC
GCGCTGTGACGGTCCGCTGGAGAGTCTATTCGGTGAGAATAAAGTGGCCC
AGCGCGAAGTGCCTTTAATCGCTATGCCGACGACAGCGGGCACGGGCTCT
GAAGTGACCAACATCGCGATCTTATCGGACAAAGCCCAGCAAATGAAAAA
GGGCATTGTAAGTGACTGCTTATTGCCGGATGTGGCTATTGTTGCTCCTG
AATTGACACTTAGCTGCCCGCGCTCTGTGACGGCTGCCAGTGGGGTTGAT
GCGCTGGTGCATGCAGTGGAAGCCTATCTCTCTAATTTCGCTACGCCGAT
AACGGATGCCTTAGCGGTTAAGGCGATGAATCTGATCGTGCATGCGCTGC
CTAAGGCATTCGCTAACCCTAACCATCGTCAAGCCCGCGAGGACATGGCC
ACTGGCAGCCTGTTAGCAGGGCTTGCATTTGGTAATGCTGGCGTAGGAGC
GGTGCATGCGCTGGCGTACCCACTAGGTATGCAAGTAAATAATGTAAGTC
ACGTAAGTAGCTTTAAAAGTGCTGGCAAATTGGTCACCGGTTATGGGGCT
GCCCAGAAGTTGCAGTTATATGTGCAGTCGTTAGGCATGCAGTGCCCGCT
AATCGTTACCGACGCTGGTGTTGTGGCTTCTGGCACGCTAGAGATCATCA
CCGAGCAGCTCCATGAGCTGAATGTGGCCTATGCAGTGTTTGATGAGGTT
ACGCCGGAACCTGAGGTTGAGATTGTCGAGCACTGCGCCCGTGCTTTTAA
TAATGGCAAGCACGATAGCGTTATTGCGGTAGGTGGCGGTAGTGCGATGG
ATATTGCCAAATGCGTAGCGGTCTACGCGCGCTGTGACGGTCCGCTGGAG
AGTCTATTCGGTGAGAATAAAGTGGCCCAGCGCGAAGTGCCTTTAATCGC
TATGCCGACGACAGCGGGCACGGGCTCTGAAGTGACCAACATCGCGATCT
TATCGGACAAAGCCCAGCAAATGAAAAAGGGCATTGTAAGTGACTGCTTA
TTGCCGGATGTGGCTATTGTTGCTCCTGAATTGACACTTAGCTGCCCGCG
CTCTGTGACGGCTGCCAGTGGGGTTGATGCGCTGGTGCATGCAGTGGAAG
CCTATCTCTCTAATTTCGCTACGCCGATAACGGATGCCTTAGCGGTTAAG
GCGATGAATCTGATCGTGCATGCGCTGCCTAAGGCATTCGCTAACCCTAA
CCATCGTCAAGCCCGCGAGGACATGGCCACTGGCAGCCTGTTAGCAGGGC
TTGCATTTGGTAATGCTGGCGTAGGAGCGGTGCATGCGCTGGCGTACCCA
CTAGGT
back to top