mRNA_E-siliculosus-1a_F_contig1209.1334.1 (mRNA) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E-siliculosus-1a_F_contig1209.1334.1
Unique NamemRNA_E-siliculosus-1a_F_contig1209.1334.1
TypemRNA
OrganismEctocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Homology
[Close]
BLAST of mRNA_E-siliculosus-1a_F_contig1209.1334.1 vs. uniprot
Match: D7FJS2_ECTSI (V-type proton ATPase subunit G n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJS2_ECTSI)

HSP 1 Score: 223 bits (567), Expect = 1.790e-68
Identity = 127/136 (93.38%), Postives = 131/136 (96.32%), Query Frame = 3 
Query:   12 CC--LTLNSTPNSTSSTMSTQIQELIAAETKASSIVAEARASRSKRMKEAKKEAETLCNAFRAEKEAAYQASMQKSMGSTGKEGDTLGAQTDAAIQSMTDDYSKNKKVVGDLLVHEVCHIVYSVPEGLKSREMQQA 413
            CC  L+ NSTPNS++S MSTQIQELIAAETKASSIVAEARASRSKRMKEAKKEAE LCNAFRAEKEAAYQASMQKSMGSTGKEGDTLGAQTDAAIQSMTDDYSKNK+VVGDLLVHEVCHIVYSVPEGLKSREMQQA
Sbjct:   20 CCGVLSHNSTPNSSTSIMSTQIQELIAAETKASSIVAEARASRSKRMKEAKKEAEALCNAFRAEKEAAYQASMQKSMGSTGKEGDTLGAQTDAAIQSMTDDYSKNKEVVGDLLVHEVCHIVYSVPEGLKSREMQQA 155
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BLAST of mRNA_E-siliculosus-1a_F_contig1209.1334.1 vs. uniprot
Match: A0A6H5KHJ3_9PHAE (V-type proton ATPase subunit G n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KHJ3_9PHAE)

HSP 1 Score: 208 bits (529), Expect = 2.780e-63
Identity = 116/119 (97.48%), Postives = 118/119 (99.16%), Query Frame = 3 
Query:   57 MSTQIQELIAAETKASSIVAEARASRSKRMKEAKKEAETLCNAFRAEKEAAYQASMQKSMGSTGKEGDTLGAQTDAAIQSMTDDYSKNKKVVGDLLVHEVCHIVYSVPEGLKSREMQQA 413
            MSTQIQELIAAETKAS+IVAEARASRSKRMKEAKKEAE LCNAFRAEKEAAYQASMQKSMGSTGKEGDTLGAQT+AAIQSMTDDYSKNKKVVGDLLVHEVCHIVYSVPEGLKSREMQQA
Sbjct:    1 MSTQIQELIAAETKASAIVAEARASRSKRMKEAKKEAEALCNAFRAEKEAAYQASMQKSMGSTGKEGDTLGAQTEAAIQSMTDDYSKNKKVVGDLLVHEVCHIVYSVPEGLKSREMQQA 119
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BLAST of mRNA_E-siliculosus-1a_F_contig1209.1334.1 vs. uniprot
Match: A0A7S2UYL7_9STRA (V-type proton ATPase subunit G n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UYL7_9STRA)

HSP 1 Score: 73.2 bits (178), Expect = 3.260e-12
Identity = 52/112 (46.43%), Postives = 68/112 (60.71%), Query Frame = 3 
Query:   69 IQELIAAETKASSIVAEARASRSKRMKEAKKEAETLCNAFRAEKEAAYQASMQKSMGSTGKEGDTLGAQTDAAIQSMTDDYSKNKKVVGDLLVHEVC-HIVYSVPEGLKSRE 401
            IQEL+AAE +ASSIV EARA+R++RMKEAK EAE     FR  KE  + A+  +S GS+  +   L   TD  I  M   Y  N + V  +LV +VC ++  +VPE L  RE
Sbjct:    6 IQELMAAENRASSIVQEARAARTERMKEAKIEAERHIEEFRKTKEEEFNAASAQSSGSSNTDFSELEKTTDKEIDDMRGQYQTNSQTVIQMLVDKVCGNVPLTVPEALHKRE 117
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BLAST of mRNA_E-siliculosus-1a_F_contig1209.1334.1 vs. uniprot
Match: A0A7S0ARJ4_9STRA (V-type proton ATPase subunit G n=1 Tax=Minutocellus polymorphus TaxID=265543 RepID=A0A7S0ARJ4_9STRA)

HSP 1 Score: 69.7 bits (169), Expect = 6.550e-11
Identity = 44/106 (41.51%), Postives = 68/106 (64.15%), Query Frame = 3 
Query:   63 TQIQELIAAETKASSIVAEARASRSKRMKEAKKEAETLCNAFRAEKEAAYQASMQKSMGSTGKEGDTLGAQTDAAIQSMTDDYSKNKKVVGDLLVHEVCHIVYSVP 380
            T IQEL+AAET+AS IVAEARA+R  RMK+AK +A+TL +A++ EK+  + + +  + G+ G     L A+T+  IQ+M   +  N +   D+L+ + C +   VP
Sbjct:    5 TGIQELMAAETRASQIVAEARAARGDRMKQAKVDAQTLIDAYKGEKQEEFNSRVLAAGGTGGSASAKLQAETNNNIQAMQGQFQSNSQKATDVLLSKCCEVSLEVP 110
[Close]
BLAST of mRNA_E-siliculosus-1a_F_contig1209.1334.1 vs. uniprot
Match: A0A7S1VIJ7_9STRA (V-type proton ATPase subunit G n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1VIJ7_9STRA)

HSP 1 Score: 68.6 bits (166), Expect = 1.760e-10
Identity = 44/104 (42.31%), Postives = 63/104 (60.58%), Query Frame = 3 
Query:   69 IQELIAAETKASSIVAEARASRSKRMKEAKKEAETLCNAFRAEKEAAYQASMQKSMGSTGKEGDTLGAQTDAAIQSMTDDYSKNKKVVGDLLVHEVCHIVYSVP 380
            IQEL+AAE +AS IVAEAR  R  RMK+AK EA+ L +A+RAEK++ +   +    GS G     L  +T + I SM  ++ KN +   D+L+ + C +   VP
Sbjct:    7 IQELMAAEQRASQIVAEARVGRGDRMKQAKTEAQELIDAYRAEKQSEFNNMVLSKGGSEGASSQKLQQETSSEINSMQGNFQKNAQKAVDVLLSKCCEVSLEVP 110
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BLAST of mRNA_E-siliculosus-1a_F_contig1209.1334.1 vs. uniprot
Match: A0A7R9WPW6_9STRA (V-type proton ATPase subunit G n=1 Tax=Craspedostauros australis TaxID=1486917 RepID=A0A7R9WPW6_9STRA)

HSP 1 Score: 68.2 bits (165), Expect = 2.290e-10
Identity = 49/117 (41.88%), Postives = 68/117 (58.12%), Query Frame = 3 
Query:   63 TQIQELIAAETKASSIVAEARASRSKRMKEAKKEAETLCNAFRAEKEAAYQASMQKSMGSTGKEGDTLGAQTDAAIQSMTDDYSKNKKVVGDLLVHEVCHIVYSVPEGLKSREMQQA 413
            T IQEL+AAET+AS IVAEAR  R  RMK+AK EA+ L + +RAEK+  +   +    GS G     L A+T+  IQ M   + KN +   D+L+ + C +   VP   + R  Q+A
Sbjct:    5 TGIQELMAAETRASQIVAEARMGRGDRMKQAKVEAQDLIDGYRAEKQEEFNNMVLSKGGSEGNASAKLQAETNKDIQEMQSLFQKNAQKAVDVLLSKCCEVSLEVPSA-RIRATQKA 120
[Close]
BLAST of mRNA_E-siliculosus-1a_F_contig1209.1334.1 vs. uniprot
Match: A0A7S3P5K3_9STRA (V-type proton ATPase subunit G n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3P5K3_9STRA)

HSP 1 Score: 68.9 bits (167), Expect = 2.590e-10
Identity = 46/106 (43.40%), Postives = 63/106 (59.43%), Query Frame = 3 
Query:   63 TQIQELIAAETKASSIVAEARASRSKRMKEAKKEAETLCNAFRAEKEAAYQASMQKSMGSTGKEGDTLGAQTDAAIQSMTDDYSKNKKVVGDLLVHEVCHIVYSVP 380
            T IQEL+AAET+AS IVAEAR  R  RMK+AK EA+ L +A+R+EK+  +   +    GS G     L A T+  IQ +  D+ KN     D+L+ + C +   VP
Sbjct:   38 TGIQELMAAETRASQIVAEARIGRGDRMKQAKVEAQVLIDAYRSEKQEEFNNMVLSKGGSEGSYSAKLQADTNKEIQELQTDFQKNAVKAVDVLLSKCCEVSLEVP 143
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BLAST of mRNA_E-siliculosus-1a_F_contig1209.1334.1 vs. uniprot
Match: A0A7S1BUJ2_9STRA (V-type proton ATPase subunit G n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1BUJ2_9STRA)

HSP 1 Score: 67.8 bits (164), Expect = 3.050e-10
Identity = 45/107 (42.06%), Postives = 69/107 (64.49%), Query Frame = 3 
Query:   60 STQIQELIAAETKASSIVAEARASRSKRMKEAKKEAETLCNAFRAEKEAAYQASMQKSMGSTGKEGDTLGAQTDAAIQSMTDDYSKNKKVVGDLLVHEVCHIVYSVP 380
            S+ IQEL+AAET+AS IVAEAR  R +RMK+AK +A+ L +A+R EK+  + A +  + GS G     L A+T+  I+ M   +++N +   D+L+ + C +  SVP
Sbjct:    4 SSGIQELMAAETRASQIVAEARIGRGERMKQAKSDAQELIDAYRGEKQEEFNARVLTAGGSGGSYSAKLQAETNQEIKMMEMQFTQNAQKAIDVLLSKCCEVDLSVP 110
[Close]
BLAST of mRNA_E-siliculosus-1a_F_contig1209.1334.1 vs. uniprot
Match: A0A6V2B9Z3_9STRA (V-type proton ATPase subunit G n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6V2B9Z3_9STRA)

HSP 1 Score: 67.4 bits (163), Expect = 4.170e-10
Identity = 45/104 (43.27%), Postives = 66/104 (63.46%), Query Frame = 3 
Query:   69 IQELIAAETKASSIVAEARASRSKRMKEAKKEAETLCNAFRAEKEAAYQASMQKSMGSTGKEGDTLGAQTDAAIQSMTDDYSKNKKVVGDLLVHEVCHIVYSVP 380
            IQEL+AAET+AS IVA+AR +R  RMK+AK +A+ L + +RAEK+  +  S+  + GS G     L A+T+  IQ M   YS+N +   D+L+ + C +   VP
Sbjct:    7 IQELMAAETRASQIVADARLARGDRMKQAKADAQELIDTYRAEKQDEFNNSVLAAGGSGGSASAKLQAETNNEIQIMQGLYSRNSQKAIDVLLSKCCEVSLEVP 110
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BLAST of mRNA_E-siliculosus-1a_F_contig1209.1334.1 vs. uniprot
Match: B5Y573_PHATC (V-type proton ATPase subunit G n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B5Y573_PHATC)

HSP 1 Score: 67.0 bits (162), Expect = 5.830e-10
Identity = 45/106 (42.45%), Postives = 64/106 (60.38%), Query Frame = 3 
Query:   63 TQIQELIAAETKASSIVAEARASRSKRMKEAKKEAETLCNAFRAEKEAAYQASMQKSMGSTGKEGDTLGAQTDAAIQSMTDDYSKNKKVVGDLLVHEVCHIVYSVP 380
            T IQEL+AAET+AS IVAEAR  R  RMK+AK EA+ L +++RAEK+  +        GS G     L A+T+  +Q+M   + KN +   D+L+ + C +   VP
Sbjct:    6 TGIQELMAAETRASQIVAEARIGRGDRMKQAKVEAQQLIDSYRAEKQEEFNNMALSQGGSEGNAAAALQAETNKEVQAMEGLFQKNVQGAVDVLLSKCCEVSLEVP 111
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig1209.1334.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FJS2_ECTSI1.790e-6893.38V-type proton ATPase subunit G n=1 Tax=Ectocarpus ... [more]
A0A6H5KHJ3_9PHAE2.780e-6397.48V-type proton ATPase subunit G n=1 Tax=Ectocarpus ... [more]
A0A7S2UYL7_9STRA3.260e-1246.43V-type proton ATPase subunit G n=1 Tax=Fibrocapsa ... [more]
A0A7S0ARJ4_9STRA6.550e-1141.51V-type proton ATPase subunit G n=1 Tax=Minutocellu... [more]
A0A7S1VIJ7_9STRA1.760e-1042.31V-type proton ATPase subunit G n=1 Tax=Grammatopho... [more]
A0A7R9WPW6_9STRA2.290e-1041.88V-type proton ATPase subunit G n=1 Tax=Craspedosta... [more]
A0A7S3P5K3_9STRA2.590e-1043.40V-type proton ATPase subunit G n=1 Tax=Amphora cof... [more]
A0A7S1BUJ2_9STRA3.050e-1042.06V-type proton ATPase subunit G n=1 Tax=Corethron h... [more]
A0A6V2B9Z3_9STRA4.170e-1043.27V-type proton ATPase subunit G n=1 Tax=Ditylum bri... [more]
B5Y573_PHATC5.830e-1042.45V-type proton ATPase subunit G n=2 Tax=Phaeodactyl... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_F_contig1209contigE-siliculosus-1a_F_contig1209:28445..32033 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef902022-09-19
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female2021-02-24
Properties
Property NameValue
Start1
Stop1
Cds size360
Model size1238
Exons4
Ec32 orthologEc-06_010400.1
Ec32 ortholog descriptionVacuolar (H )-ATPase G subunit
Hectar predicted targeting categoryother localisation
BRITEko00000,ko00001,ko00002,ko01000,ko02000
Best eggNOG OGNA|NA|NA
Best tax levelEukaryota
COG Functional cat.K
EC3.1.1.3
EggNOG OGsKOG1772@1,KOG1772@2759
EggNOG free text desc.proton transmembrane transport
GOsGO:0000041,GO:0000166,GO:0000221,GO:0000322,GO:0000323,GO:0000324,GO:0000325,GO:0000329,GO:0000331,GO:0001700,GO:0001763,GO:0002009,GO:0003674,GO:0003824,GO:0005215,GO:0005488,GO:0005515,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005764,GO:0005765,GO:0005773,GO:0005774,GO:0005794,GO:0005829,GO:0005886,GO:0006139,GO:0006163,GO:0006164,GO:0006725,GO:0006753,GO:0006754,GO:0006793,GO:0006796,GO:0006807,GO:0006810,GO:0006811,GO:0006812,GO:0006826,GO:0006873,GO:0006875,GO:0006879,GO:0006885,GO:0007035,GO:0007154,GO:0007165,GO:0007166,GO:0007167,GO:0007169,GO:0007275,GO:0007424,GO:0007430,GO:0008021,GO:0008104,GO:0008144,GO:0008150,GO:0008152,GO:0008219,GO:0008286,GO:0008324,GO:0008553,GO:0009058,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009167,GO:0009168,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009628,GO:0009653,GO:0009719,GO:0009725,GO:0009790,GO:0009792,GO:0009888,GO:0009894,GO:0009987,GO:0010033,GO:0010243,GO:0010506,GO:0010941,GO:0010942,GO:0012501,GO:0012505,GO:0012506,GO:0015031,GO:0015075,GO:0015077,GO:0015078,GO:0015318,GO:0015399,GO:0015405,GO:0015662,GO:0015672,GO:0015682,GO:0015833,GO:0015988,GO:0015991,GO:0016020,GO:0016021,GO:0016241,GO:0016462,GO:0016469,GO:0016471,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017076,GO:0017111,GO:0017144,GO:0018130,GO:0019222,GO:0019438,GO:0019637,GO:0019693,GO:0019725,GO:0019829,GO:0019899,GO:0022804,GO:0022853,GO:0022857,GO:0022890,GO:0023052,GO:0030001,GO:0030003,GO:0030004,GO:0030133,GO:0030285,GO:0030554,GO:0030641,GO:0030658,GO:0030659,GO:0030672,GO:0031090,GO:0031164,GO:0031224,GO:0031300,GO:0031301,GO:0031323,GO:0031329,GO:0031410,GO:0031982,GO:0032501,GO:0032502,GO:0032553,GO:0032555,GO:0032559,GO:0032868,GO:0032869,GO:0032870,GO:0032991,GO:0033036,GO:0033176,GO:0033178,GO:0033180,GO:0033181,GO:0033572,GO:0034220,GO:0034641,GO:0034654,GO:0035239,GO:0035295,GO:0035639,GO:0036094,GO:0036295,GO:0036296,GO:0036442,GO:0042221,GO:0042592,GO:0042623,GO:0042625,GO:0042626,GO:0042886,GO:0043067,GO:0043068,GO:0043167,GO:0043168,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043434,GO:0043492,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044422,GO:0044424,GO:0044425,GO:0044433,GO:0044437,GO:0044444,GO:0044446,GO:0044456,GO:0044459,GO:0044464,GO:0044769,GO:0045184,GO:0045202,GO:0045851,GO:0046034,GO:0046390,GO:0046483,GO:0046916,GO:0046933,GO:0046961,GO:0048518,GO:0048522,GO:0048729,GO:0048731,GO:0048754,GO:0048856,GO:0048878,GO:0050789,GO:0050794,GO:0050801,GO:0050896,GO:0051117,GO:0051179,GO:0051234,GO:0051452,GO:0051453,GO:0051716,GO:0055065,GO:0055067,GO:0055072,GO:0055076,GO:0055080,GO:0055082,GO:0055085,GO:0055086,GO:0060429,GO:0060446,GO:0060541,GO:0060562,GO:0061138,GO:0065007,GO:0065008,GO:0070382,GO:0070482,GO:0070887,GO:0071310,GO:0071375,GO:0071417,GO:0071453,GO:0071495,GO:0071702,GO:0071704,GO:0071705,GO:0071944,GO:0072512,GO:0072521,GO:0072522,GO:0090407,GO:0090662,GO:0097159,GO:0097367,GO:0097458,GO:0097708,GO:0098563,GO:0098588,GO:0098655,GO:0098660,GO:0098662,GO:0098771,GO:0098793,GO:0098796,GO:0098797,GO:0098805,GO:0098852,GO:0099131,GO:0099132,GO:0099501,GO:0099503,GO:1901135,GO:1901137,GO:1901265,GO:1901293,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1901652,GO:1901653,GO:1901698,GO:1901699,GO:1901700,GO:1901701,GO:1902600
KEGG ModuleM00098,M00160
KEGG Pathwayko00190,ko00561,ko01100,ko04145,ko04150,ko04721,ko04966,ko05110,ko05120,ko05323,map00190,map00561,map01100,map04145,map04150,map04721,map04966,map05110,map05120,map05323
KEGG ReactionR02250,R02687
KEGG TC2.A.21.5.3,2.A.21.5.4,2.A.21.5.5,3.A.2.2
KEGG koko:K01046,ko:K02152,ko:K14388
KEGG rclassRC00020,RC00037,RC00041,RC00094
Preferred nameATP6V1G1
Seed eggNOG ortholog2880.D7FJS2
Seed ortholog evalue1.5e-53
Seed ortholog score215.3
Taxonomic scopeEukaryota
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_F_contig1209.1334.1prot_E-siliculosus-1a_F_contig1209.1334.1Ectocarpus siliculosus Ec863f_EcPH12_90f femalepolypeptideE-siliculosus-1a_F_contig1209 28501..31211 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927729.17368-UTR-E-siliculosus-1a_F_contig1209:28444..285001622927729.17368-UTR-E-siliculosus-1a_F_contig1209:28444..28500Ectocarpus siliculosus Ec863f_EcPH12_90f femaleUTRE-siliculosus-1a_F_contig1209 28445..28500 +
1696318657.2812645-UTR-E-siliculosus-1a_F_contig1209:28444..285001696318657.2812645-UTR-E-siliculosus-1a_F_contig1209:28444..28500Ectocarpus siliculosus Ec863f_EcPH12_90f femaleUTRE-siliculosus-1a_F_contig1209 28445..28500 +
1622927729.23769-UTR-E-siliculosus-1a_F_contig1209:31211..320331622927729.23769-UTR-E-siliculosus-1a_F_contig1209:31211..32033Ectocarpus siliculosus Ec863f_EcPH12_90f femaleUTRE-siliculosus-1a_F_contig1209 31212..32033 +
1696318657.340395-UTR-E-siliculosus-1a_F_contig1209:31211..320331696318657.340395-UTR-E-siliculosus-1a_F_contig1209:31211..32033Ectocarpus siliculosus Ec863f_EcPH12_90f femaleUTRE-siliculosus-1a_F_contig1209 31212..32033 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927729.1926954-CDS-E-siliculosus-1a_F_contig1209:28500..285731622927729.1926954-CDS-E-siliculosus-1a_F_contig1209:28500..28573Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1209 28501..28573 +
1696318657.2943466-CDS-E-siliculosus-1a_F_contig1209:28500..285731696318657.2943466-CDS-E-siliculosus-1a_F_contig1209:28500..28573Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1209 28501..28573 +
1622927729.2048297-CDS-E-siliculosus-1a_F_contig1209:29633..297341622927729.2048297-CDS-E-siliculosus-1a_F_contig1209:29633..29734Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1209 29634..29734 +
1696318657.3040946-CDS-E-siliculosus-1a_F_contig1209:29633..297341696318657.3040946-CDS-E-siliculosus-1a_F_contig1209:29633..29734Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1209 29634..29734 +
1622927729.2158022-CDS-E-siliculosus-1a_F_contig1209:30575..306461622927729.2158022-CDS-E-siliculosus-1a_F_contig1209:30575..30646Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1209 30576..30646 +
1696318657.3137429-CDS-E-siliculosus-1a_F_contig1209:30575..306461696318657.3137429-CDS-E-siliculosus-1a_F_contig1209:30575..30646Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1209 30576..30646 +
1622927729.2276573-CDS-E-siliculosus-1a_F_contig1209:31096..312111622927729.2276573-CDS-E-siliculosus-1a_F_contig1209:31096..31211Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1209 31097..31211 +
1696318657.3263566-CDS-E-siliculosus-1a_F_contig1209:31096..312111696318657.3263566-CDS-E-siliculosus-1a_F_contig1209:31096..31211Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1209 31097..31211 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E-siliculosus-1a_F_contig1209.1334.1

>prot_E-siliculosus-1a_F_contig1209.1334.1 ID=prot_E-siliculosus-1a_F_contig1209.1334.1|Name=mRNA_E-siliculosus-1a_F_contig1209.1334.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=120bp
MSTQIQELIAAETKASSIVAEARASRSKRMKEAKKEAETLCNAFRAEKEA
AYQASMQKSMGSTGKEGDTLGAQTDAAIQSMTDDYSKNKKVVGDLLVHEV
CHIVYSVPEGLKSREMQQA*
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mRNA from alignment at E-siliculosus-1a_F_contig1209:28445..32033+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E-siliculosus-1a_F_contig1209.1334.1 ID=mRNA_E-siliculosus-1a_F_contig1209.1334.1|Name=mRNA_E-siliculosus-1a_F_contig1209.1334.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=3589bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1209:28445..32033+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
GACCGCTGCTGTGCTGTCTCACACTAAATAGCACGCCGAACAGCACCAGC
AGCACCATGTCCACCCAAATCCAGGAGCTCATCGCTGCGGAGACGAAGGC
CTCCTCTATCGTTGCGGAGGCCCGGGCATGTGAGTAGCTGGGAAGTGCAG
TTCCAGTCGTGAAAAGTATGCTTCGATTTTGCGGAAAGAGTCGCGCCAGC
GAAGAGCGAGCATAGAGAGTTGGGGGGGAGGGCACAGCGAGGGTTGGGTC
TGAGACCCACAACTCCCTCACGAGTTTGCTGTTGTCGGTGGCTCGAAGAA
CAGTTTGGTGCAGTTCAGCGAGGGAGAGGTCCTGCTGTTAGTGGACCTAC
CTTCCTCAGCCATCTCTGCACTACAGAATCCGCCATCTCGTTAGGAGCGC
TCTGCGAGAGACGTTGCCAGGAATCGAACACGAAGTGCGCTCTCTTGGGC
GGCGCCAATTGCCGACAGGAAGGCTGGCATTGAGCAAAGCGCCGGGTTCT
GTGTACACTGCGCCTGTTTCGTGCTGATGTGCTGGCGTTGCAAGCGTATA
CCTGCCTACTGCAGCATTTGCGCCCCGATGTTCCTCGGTTTGAGAACAAC
AGCAGCACAGCAGGTAGTTTACACGTGCATTTGCCGTTGCAAGGGGAACC
ATTCGGTAGTATACCTGCACCCCGCCCTCTATCTTTCGGCGTTGACAGCT
GAACCATCAAGCGACTGCTCTATTCTGTATGTCGTTGCGTTCATGGATTG
TAATACAGCCAGTAAGTCAAACTGATGTGCTGTTTGCTGCAGTACCCAGT
ACATTTGTATTGCCCGCACGACTCCCCCCCCCCCTCCGAGCTCCCATCCC
CCAACAAGAGCAGTGGCATGTTTTGGTGTGATGCTGAATCCGGTTCCCTT
CTTGTACAATCCGTTATGGGCGGGACCCAGAGTTCTCCTTCTTTTCTGGC
CCGCTGAGACATACTGACATCCCCGATTTGCTCCTCAACAGCACAAATCG
TCAACTAGTTGGCCATTTGCCATGCCAGGTGCGGCCTGCGTGATGAGCAG
GATCGCGAGTGCTGTTCTCGCTCCCAAAAACCATACCATCATCTCACAAC
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
CCCCCCGCCCCCCCCCCGCGCCCACCCGATGTCGTGTAGCGCGATCAAAG
CGCATGAAGGAGGCCAAAAAGGAGGCCGAGACCCTCTGCAACGCCTTTCG
CGCGGAGAAGGAGGCGGCTTACCAGGCTAGCATGCAAAAGGTGAATGACC
CGCAAGGTTTAGAACGATTCACACAATGGCGCGAGCACACAACGTGCTGG
TCCGAAGTACGGTGGAGTGACAACGATGAAGAGAGAACGAAATAGATTCG
ACGGGTATAGCTGAATATGTTGTCGTTGTTGCATATTTTTCAAGTTTTGG
GGTTTTGGGGGGGGCATTCAAGCGTACCCCGCAATGCAGACAAGTGATCA
ACACGCCAACTTTCTCCGACCGTAGACGCTTGCGTTGCTCATGATTGTGG
ATAGGGTGGGTAGCGGTGTACACTACCGTAAGTGGGATGAAGAGGTGCGC
TCCAGCTATGCTGTATACATCGGAGGGCAACGCCCTCGCGGTTCGCGGTG
TGACAGATGGGTCTCGCCGTAGGTCGGCCGCTCTCCCTCTCGGTTTCGTT
GCGGGGTGTATTCGATATTCCACCGCCCGTGGATGAATGCCATGTTTGTC
AAGACACGCTACTTTGGTGTTGCTAAGCGTTGGTATCAGGGGAAAATGAT
CCCTCCTGAACCCAATTTGTGTGTTCGTAACTGAGGCATGTCTCGACCCC
CTCGAAAGTTCTACATGTCCCCAACACTATGCCGTCTCCTGCATCATGTA
CCATCCATTTTTGTCCACGAGACGATCCCACCTTCGATGAAGTTTTTCCT
CTCGCACCCCCTCCCCGCGGTTGGCTTTTGTGTTTGTGTGTTCTTCATAA
AAGAACGTTTCTGCCGACGATTAAACGATCGAAGGGTATGTATAGTAGTT
GTTTCTTCGACTATTCTTCGCGTGTTGAAACAATGACAGTATCTCCTCCG
CCCTTGTTTGCTGCCCTTTTTTATTTCTCAGTCGATGGGGTCTACGGGAA
AGGAAGGGGACACGCTGGGCGCTCAAACCGACGCTGCGATCCAGAGTATG
ACGTGAGTGTCTTCCTCCCACAGCAACGGATGAGCGCTGCTTTACATGGG
AGTATTTTTCATGAAGGAGGTGTAGCAGTGGCGTATTTTATGTGCTTTCA
CATACCACTGTTTCCAGAGCTCCAAATCCGACCACGTCGAGCTTTTTTGC
AGACGAGGATAGATTCGCGGCACGAGCCGGCATGCTATGCTCCCTCGTCG
CGCAGGCGCCGCTGCTTGCCACAGAAAATTGTATATACAACGATTCGCCT
TGTTTGTTGTGGGATTATACCCCTATGCTTGCCCACATCTTTCGTTCTCT
CTCTCTCTCTCTCTCTCTCTGTGTGTTTGATACGGACGTAACTACATGGT
GTGGTACGTGGTATTTATCGCCTACCCCGGGCCTTACCATATACGCACAC
GCACCTTCCCTCGCTGCCTCGCTCCCTCCGCTACCCCTACGTTAACCTGC
AGCGACGACTACTCTAAGAACAAGAAGGTCGTCGGCGACCTTCTCGTACA
CGAAGTGTGCCACATCGTATACAGCGTACCGGAGGGCCTTAAGTCTCGCG
AAATGCAGCAGGCGTGAGAACCTTTGTTTCTTACTGGCGGGGGGAGGTTA
GGCAGCAGGATTAGGGGGGGTAGGGGTCCCGTATTTTTTTTTTGTCCAGC
AGTAAGCTACACACACCGTTTGATTTTCCGGATAACCTGGAGCGTGGCGT
TGGGGTGTCAAGGTTTGTTGCACACACCGTTTTTTGTTGCACACACCGTT
TGATTTTCCGTATAACCTGGCGCGTGGCCTTGGGGTGTCAAGGTTGGACC
CGATATTGTTTTGGCGATGGGTTTCTTTGTGTTTTTGGCGTTTTCCGCCG
CTCAACCCCCTGGTTTCGGCATCAGCTAGGGACACAGAGTAAATCGGAAG
GCTTGCATTGAAGAAGTGTTCCCAACCATCACTGCAACCACAGGGTCAAG
AGCTGCTGGCCTCTCAACATCTTTTGTGCGTAGGAGGGGGGGGGGGGTTG
GGGCATTCGAAATTCAGCGTGATCATCCTCAGTTGTTCGGAAGGGATACG
TATCAGCAGCAGCGTTTTCGGCCTACGGCATCGTGGGTTGCCTCCATCAG
GAAGCAACGGCAGTTTCTTTGTATCTAAGCTTGGCTGCCACGTGATGGAA
GCTGGACCAACGACATGGGATTCGGTTCGGGTGCATGCAGTCCTGTTTTG
CCGCAAAAGAAGTCGCCCAAGCGAATAGGCCCAAGGCCAGCTCGTATCGT
CGGTTTGACAGCAACGAACCATACGTCCACTGTTTATCTTCGTGTTGACC
AGGCAGTTCGTCTGAACCGGACACACGCCAGGAATGTTCATTTTTATCGC
CATCTCTACCTCGCCACAACCCCGCCCGCGAGAACCGGG
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Coding sequence (CDS) from alignment at E-siliculosus-1a_F_contig1209:28445..32033+

>mRNA_E-siliculosus-1a_F_contig1209.1334.1 ID=mRNA_E-siliculosus-1a_F_contig1209.1334.1|Name=mRNA_E-siliculosus-1a_F_contig1209.1334.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=720bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1209:28445..32033+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
ATGTCCACCCAAATCCAGGAGCTCATCGCTGCGGAGACGAAGGCCTCCTC
TATCGTTGCGGAGGCCCGGGCATATGTCCACCCAAATCCAGGAGCTCATC
GCTGCGGAGACGAAGGCCTCCTCTATCGTTGCGGAGGCCCGGGCATCGCG
ATCAAAGCGCATGAAGGAGGCCAAAAAGGAGGCCGAGACCCTCTGCAACG
CCTTTCGCGCGGAGAAGGAGGCGGCTTACCAGGCTAGCATGCAAAAGCGC
GATCAAAGCGCATGAAGGAGGCCAAAAAGGAGGCCGAGACCCTCTGCAAC
GCCTTTCGCGCGGAGAAGGAGGCGGCTTACCAGGCTAGCATGCAAAAGTC
GATGGGGTCTACGGGAAAGGAAGGGGACACGCTGGGCGCTCAAACCGACG
CTGCGATCCAGAGTATGACTCGATGGGGTCTACGGGAAAGGAAGGGGACA
CGCTGGGCGCTCAAACCGACGCTGCGATCCAGAGTATGACCGACGACTAC
TCTAAGAACAAGAAGGTCGTCGGCGACCTTCTCGTACACGAAGTGTGCCA
CATCGTATACAGCGTACCGGAGGGCCTTAAGTCTCGCGAAATGCAGCAGG
CGTGACGACGACTACTCTAAGAACAAGAAGGTCGTCGGCGACCTTCTCGT
ACACGAAGTGTGCCACATCGTATACAGCGTACCGGAGGGCCTTAAGTCTC
GCGAAATGCAGCAGGCGTGA
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