mRNA_E-siliculosus-1a_F_contig1209.1333.1 (mRNA) Ectocarpus siliculosus Ec863f_EcPH12_90f female
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Overview
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig1209.1333.1 vs. uniprot
Match: D7FJS1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJS1_ECTSI) HSP 1 Score: 612 bits (1577), Expect = 6.890e-216 Identity = 312/312 (100.00%), Postives = 312/312 (100.00%), Query Frame = 1
Query: 46 MVCLTTVALGFLAVPTIVWLVTYFVPLLLVAVLPPQNLKKKYGAKWALVTGGGSGIGKALVEELALQGLNVVIVSMDDQFLADTFALVSSKFPGQEFRKVGATFSPGVDYMDKIKAVTSDINVQCVFNNAGFIVTGFYESSAEGKQMANLECNATAAAKISHHFVGRMIREKQKGCVVFTSSVAAYCPTPFSAMYGATKAFLSNLAASLSVEVRCKGIDVLSVHPSPVASQFYSNLDHTIELMDKAKESAVPPNVLPREILKSIGRVVWRDIGGMAVGVRVGTKMLSYNFLATAFSMVGPYLPDYKKNDVGR 981
MVCLTTVALGFLAVPTIVWLVTYFVPLLLVAVLPPQNLKKKYGAKWALVTGGGSGIGKALVEELALQGLNVVIVSMDDQFLADTFALVSSKFPGQEFRKVGATFSPGVDYMDKIKAVTSDINVQCVFNNAGFIVTGFYESSAEGKQMANLECNATAAAKISHHFVGRMIREKQKGCVVFTSSVAAYCPTPFSAMYGATKAFLSNLAASLSVEVRCKGIDVLSVHPSPVASQFYSNLDHTIELMDKAKESAVPPNVLPREILKSIGRVVWRDIGGMAVGVRVGTKMLSYNFLATAFSMVGPYLPDYKKNDVGR
Sbjct: 1 MVCLTTVALGFLAVPTIVWLVTYFVPLLLVAVLPPQNLKKKYGAKWALVTGGGSGIGKALVEELALQGLNVVIVSMDDQFLADTFALVSSKFPGQEFRKVGATFSPGVDYMDKIKAVTSDINVQCVFNNAGFIVTGFYESSAEGKQMANLECNATAAAKISHHFVGRMIREKQKGCVVFTSSVAAYCPTPFSAMYGATKAFLSNLAASLSVEVRCKGIDVLSVHPSPVASQFYSNLDHTIELMDKAKESAVPPNVLPREILKSIGRVVWRDIGGMAVGVRVGTKMLSYNFLATAFSMVGPYLPDYKKNDVGR 312
BLAST of mRNA_E-siliculosus-1a_F_contig1209.1333.1 vs. uniprot
Match: A0A835YIP3_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YIP3_9STRA) HSP 1 Score: 380 bits (977), Expect = 6.310e-125 Identity = 185/304 (60.86%), Postives = 231/304 (75.99%), Query Frame = 1
Query: 70 LGFLAVPTIVWLVTYFVPLLLVAVLPPQNLKKKYGAKWALVTGGGSGIGKALVEELALQGLNVVIVSMDDQFLADTFALVSSKFPGQEFRKVGATFSPGVDYMDKIKAVTSDINVQCVFNNAGFIVTGFYESSAEGKQMANLECNATAAAKISHHFVGRMIREKQKGCVVFTSSVAAYCPTPFSAMYGATKAFLSNLAASLSVEVRCKGIDVLSVHPSPVASQFYSNLDHTIELMDKAKESAVPPNVLPREILKSIGRVVWRDIGGMAVGVRVGTKMLSYNFLATAFSMVGPYLPDYKKNDVGR 981
LG LA+PT++W+V YF PLL VLP QNLKKKYGA+WALVTGG SGIG+ALVE LALQG NVVIV++ L +T A +S+ F Q+F KVG F+PGVDYM IK T + +QC+FNNAG+IVTGFY+S+ KQ AN+ECNA AAA+I+HHF+GR+I + +GCVVFTSS AY P PF MYGATKAFL+N A SL+ EVRCKG+DVLS+HPSPVA+ FYS LDH I++MDKA AV + LP+ I KS+GRVVWR++G AV +R+ +L NFL + ++ P+LPDYK +DV R
Sbjct: 15 LGALALPTVLWIVLYFGPLLATMVLPAQNLKKKYGAEWALVTGGSSGIGRALVEALALQGFNVVIVALGGGLLDETHAALSAAFKDQKFVKVGVNFAPGVDYMTPIKEATDGLPIQCIFNNAGYIVTGFYDSTLGAKQAANMECNAVAAARITHHFLGRLIAARLRGCVVFTSSAVAYMPAPFCVMYGATKAFLTNFAGSLAAEVRCKGVDVLSIHPSPVATAFYSGLDHRIDMMDKAARGAVAASTLPKVIFKSVGRVVWREVGAPAVIMRLSASLLPGNFLYWSSAVAAPFLPDYKTHDVNR 318
BLAST of mRNA_E-siliculosus-1a_F_contig1209.1333.1 vs. uniprot
Match: A0A6V1NV24_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1NV24_HETAK) HSP 1 Score: 365 bits (938), Expect = 3.390e-119 Identity = 184/306 (60.13%), Postives = 233/306 (76.14%), Query Frame = 1
Query: 64 VALGFLAVPTIVWLVTYFVPLLLVAVLPPQNLKKKYGAKWALVTGGGSGIGKALVEELALQGLNVVIVSMDDQFLADTFALVSSKFPGQEFRKVGATFSPGVDYMDKIKAVTSDINVQCVFNNAGFIVTGFYESSAEGKQMANLECNATAAAKISHHFVGRMIREKQKGCVVFTSSVAAYCPTPFSAMYGATKAFLSNLAASLSVEVRCKGIDVLSVHPSPVASQFYSNLDHTIELMDKAKESAVPPNVLPREILKSIGRVVWRDIGGMAVGVRVGTKMLSYNFLATAFSMVGPYLPDYKKNDVGR 981
V LG LA PT++W +TYFV ++LVA+ P NLKKKYGA+WALVTGG SGIGK+L LA QGLNVV+V+++DQ L DT A + + FP ++F VGA SPG YM+KI T DI+VQCVFNNAG+IVTGF+E +Q+AN+ECNATAA I+HHF+ R++ E ++GC+VFTSSV AY P PFS YGATKAFLS+ A+SL++E R KGIDV SVHPSPVAS+FY N H +E+MD AK+ A P+ P +ILKS+GR V RD+GG AVG+RV T ++S NFLA+AF+ +LPD+KK V R
Sbjct: 8 VILGTLATPTVIWSLTYFVRVILVALSRPVNLKKKYGAEWALVTGGSSGIGKSLCRRLAEQGLNVVVVALEDQLLKDTVAELKAAFPERQFIMVGANLSPGQKYMEKIAKATKDISVQCVFNNAGYIVTGFFEQVPVERQLANVECNATAAVAITHHFLSRLVSEGKRGCIVFTSSVVAYMPAPFSVTYGATKAFLSSFASSLAIENREKGIDVCSVHPSPVASRFYDNT-HKMEMMDFAKKGAASPDAYPDQILKSVGRCVLRDVGGFAVGMRVVTCLMSENFLASAFAAAARFLPDFKKYSVDR 312
BLAST of mRNA_E-siliculosus-1a_F_contig1209.1333.1 vs. uniprot
Match: A0A7S1XLR4_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XLR4_9STRA) HSP 1 Score: 362 bits (930), Expect = 5.980e-118 Identity = 176/311 (56.59%), Postives = 236/311 (75.88%), Query Frame = 1
Query: 49 VCLTTVALGFLAVPTIVWLVTYFVPLLLVAVLPPQNLKKKYGAKWALVTGGGSGIGKALVEELALQGLNVVIVSMDDQFLADTFALVSSKFPGQEFRKVGATFSPGVDYMDKIKAVTSDINVQCVFNNAGFIVTGFYESSAEGKQMANLECNATAAAKISHHFVGRMIREKQKGCVVFTSSVAAYCPTPFSAMYGATKAFLSNLAASLSVEVRCKGIDVLSVHPSPVASQFYSNLDHTIELMDKAKESAVPPNVLPREILKSIGRVVWRDIGGMAVGVRVGTKMLSYNFLATAFSMVGPYLPDYKKNDVGR 981
+C+TT LG A+PT++W+VTYF P+L++ +LP +LKKKY A+WALVTG GSGIG+ LV +LA QG NVV+VS+DD+FLA+T LV+S+FP QEFRKVG F+PG YM I+ T+DI+VQC+FNNAG++VTGF++ A KQ+ NLECN TAA ++HHF+G+++ +K KGC+VFTSSVA Y P+PFS++YGATKAFLS A ++VE GIDV SVHPSPV S FY + H I++++KAK +AV P+VLP +I +IGRVV RD+G A+ +R+ ++SYNFL AF P +PD+KK R
Sbjct: 4 ICMTTALLGLCAIPTLLWMVTYFGPILVMNLLPVPDLKKKYNAEWALVTGAGSGIGRELVFKLARQGFNVVLVSLDDKFLAETMDLVTSQFPSQEFRKVGCLFAPGQKYMKLIERKTADIDVQCIFNNAGYLVTGFFDREASTKQLGNLECNTTAAVAVTHHFLGKLVDKKLKGCIVFTSSVAGYIPSPFSSVYGATKAFLSQFACCIAVEAAPCGIDVCSVHPSPVNSNFYDKV-HKIDMLEKAKAAAVTPDVLPDQIFGAIGRVVLRDMGVFAIAIRLLVSIMSYNFLTQAFCAFAPTMPDFKKFGADR 313
BLAST of mRNA_E-siliculosus-1a_F_contig1209.1333.1 vs. uniprot
Match: A0A7R9ZAP0_9STRA (Hypothetical protein n=2 Tax=Odontellaceae TaxID=2749909 RepID=A0A7R9ZAP0_9STRA) HSP 1 Score: 362 bits (929), Expect = 2.050e-117 Identity = 182/301 (60.47%), Postives = 218/301 (72.43%), Query Frame = 1
Query: 79 LAVPTIVWLVTYFVPLLLVAVLPPQNLKKKYGAKWALVTGGGSGIGKALVEELALQGLNVVIVSMDDQFLADTFALVSSKFPGQEFRKVGATFSPGVDYMDKIKAVTSDINVQCVFNNAGFIVTGFYESSAEGKQMANLECNATAAAKISHHFVGRMIREKQKGCVVFTSSVAAYCPTPFSAMYGATKAFLSNLAASLSVEVRCKGIDVLSVHPSPVASQFYSNLDHTIELMDKAKESAVPPNVLPREILKSIGRVVWRDIGGMAVGVRVGTKMLSYNFLATAFSMVGPYLPDYKKNDVGR 981
LAVPTI WLV Y +P L V + P +LKKKY AKWALVTGGGSGIGKAL +LA QGLNVV+VS+DD L T + +P FR VG TFSPGVDYM +IK T DI V VFNNAGFIVTGF + + GK +AN+ECNATAA I+HHFV M+ +K KGC+VFTSSVA + PTPF+AMY +TKAFLS A SL +EV+ GIDV ++HPSPVAS FY +DH IELM+ A++SAVPP LP +IL+SIG RD+GGMA R+GT L YNF F+ P+LPDYKK++ R
Sbjct: 41 LAVPTIFWLVAYLIPQLFVCIRPVPDLKKKYNAKWALVTGGGSGIGKALCFKLASQGLNVVVVSLDDDVLKTTMKELKETYPELSFRSVGCTFSPGVDYMKQIKDATKDIEVPIVFNNAGFIVTGFLDQAPIGKLLANIECNATAAVNITHHFVQVMVSKKLKGCIVFTSSVAGFIPTPFAAMYASTKAFLSQFACSLHIEVQNLGIDVCAIHPSPVASNFYDKVDHKIELMEAAQKSAVPPQQLPNDILRSIGACALRDLGGMAWSTRMGTFFLPYNFFTEMFTAAAPFLPDYKKHNKSR 341
BLAST of mRNA_E-siliculosus-1a_F_contig1209.1333.1 vs. uniprot
Match: A0A7R9WZI5_9STRA (Hypothetical protein n=1 Tax=Craspedostauros australis TaxID=1486917 RepID=A0A7R9WZI5_9STRA) HSP 1 Score: 361 bits (927), Expect = 3.340e-117 Identity = 173/308 (56.17%), Postives = 228/308 (74.03%), Query Frame = 1
Query: 58 TTVALGFLAVPTIVWLVTYFVPLLLVAVLPPQNLKKKYGAKWALVTGGGSGIGKALVEELALQGLNVVIVSMDDQFLADTFALVSSKFPGQEFRKVGATFSPGVDYMDKIKAVTSDINVQCVFNNAGFIVTGFYESSAEGKQMANLECNATAAAKISHHFVGRMIREKQKGCVVFTSSVAAYCPTPFSAMYGATKAFLSNLAASLSVEVRCKGIDVLSVHPSPVASQFYSNLDHTIELMDKAKESAVPPNVLPREILKSIGRVVWRDIGGMAVGVRVGTKMLSYNFLATAFSMVGPYLPDYKKNDVGR 981
T + L LA+PTIVWL+TY +P L++A +LKKKY A+WALVTGGGSGIGK+L +LA QGLNVVIVS+DD FL +T + K+P +FR VG F+P DYM I+ T D+++QC+FNNAGF+VTGF++ + K M N+ECNATAA +I+HHFVG+++ +K +GCVVFTSSVA Y PTPFS+ YGATKAF+S LA L +E++ GIDV +V+PSPVAS FY+ LDH I+L++ A++ AV P+ LP E+ KSIG RD+GGMA+G R+GT ++YNF F+ PYLPDYK + R
Sbjct: 28 TMILLAVLAIPTIVWLLTYTIPQLIMAFRAVPDLKKKYDAEWALVTGGGSGIGKSLAFKLASQGLNVVIVSLDDDFLKETMKQLKDKYPDLKFRSVGVNFAPNTDYMKPIREATDDLHIQCIFNNAGFLVTGFFDQAPLPKLMVNMECNATAAFQITHHFVGKLVSKKSRGCVVFTSSVAGYVPTPFSSSYGATKAFISQLACCLHIELKSLGIDVCAVNPSPVASNFYAKLDHKIDLLESARKQAVTPDALPDEMFKSIGMCALRDVGGMALGTRMGTFFIAYNFFTGIFAAAAPYLPDYKTHSKTR 335
BLAST of mRNA_E-siliculosus-1a_F_contig1209.1333.1 vs. uniprot
Match: F0YBY2_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YBY2_AURAN) HSP 1 Score: 353 bits (906), Expect = 2.250e-114 Identity = 171/304 (56.25%), Postives = 227/304 (74.67%), Query Frame = 1
Query: 70 LGFLAVPTIVWLVTYFVPLLLVAVLPPQNLKKKYGAKWALVTGGGSGIGKALVEELALQGLNVVIVSMDDQFLADTFALVSSKFPGQEFRKVGATFSPGVDYMDKIKAVTSDINVQCVFNNAGFIVTGFYESSAEGKQMANLECNATAAAKISHHFVGRMIREKQKGCVVFTSSVAAYCPTPFSAMYGATKAFLSNLAASLSVEVRCKGIDVLSVHPSPVASQFYSNLDHTIELMDKAKESAVPPNVLPREILKSIGRVVWRDIGGMAVGVRVGTKMLSYNFLATAFSMVGPYLPDYKKNDVGR 981
L LA PT +WL YF+PLL + + Q+LKKKYGA WA+VTGG +GIG+A+ EELA QGLNVV+ ++ D+FL A +S+ + GQEF VG +F+PG DY++KIKA T+D +VQ VFNNAGFIVTGF+++ GK + N+ECNATAA I+HHF M+R+ KGC+VFTSS +AY P PF+ +YGATKAF+S AAS++VE++CKGIDV +HPSPVAS FY+ ++H I+ M+ K+ AV P+ LPREI SIGR V RD+G AVG+R+G +L Y+ LA ++V P+LPDY +ND R
Sbjct: 8 LYILAAPTALWLAAYFLPLLYIRLRGVQDLKKKYGATWAVVTGGSTGIGRAICEELAKQGLNVVVAALPDKFLEPAVAELSAAYKGQEFVAVGVSFAPGADYLEKIKAATADKDVQIVFNNAGFIVTGFFDTQPLGKHLVNMECNATAAVAITHHFAAAMMRKGLKGCIVFTSSASAYIPNPFAIIYGATKAFMSQFAASIAVELQCKGIDVCVIHPSPVASNFYNKVEHKIDSMESFKKLAVDPSELPREIFASIGRCVLRDVGNTAVGMRLGVALLPYSALAHIIALVAPFLPDYVENDKKR 311
BLAST of mRNA_E-siliculosus-1a_F_contig1209.1333.1 vs. uniprot
Match: A0A7S2I2H6_9STRA (Hypothetical protein n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2I2H6_9STRA) HSP 1 Score: 352 bits (904), Expect = 7.470e-114 Identity = 173/301 (57.48%), Postives = 221/301 (73.42%), Query Frame = 1
Query: 79 LAVPTIVWLVTYFVPLLLVAVLPPQNLKKKYGAKWALVTGGGSGIGKALVEELALQGLNVVIVSMDDQFLADTFALVSSKFPGQEFRKVGATFSPGVDYMDKIKAVTSDINVQCVFNNAGFIVTGFYESSAEGKQMANLECNATAAAKISHHFVGRMIREKQKGCVVFTSSVAAYCPTPFSAMYGATKAFLSNLAASLSVEVRCKGIDVLSVHPSPVASQFYSNLDHTIELMDKAKESAVPPNVLPREILKSIGRVVWRDIGGMAVGVRVGTKMLSYNFLATAFSMVGPYLPDYKKNDVGR 981
LA+PT+ WLV Y +P + ++ P +LKK+Y A+WALVTG GSGIGKAL +LA QGLNVV+VS+DD FL T + +++P +FR VG TFSPGV Y+DKIK T DI V+ VFNNAGFIVTGF + S GK +AN+ECN TA I+HHF+ M+ +K KGCVV+TSSVA + PTPF+AMY +TKAFLS +A L +EV+ GIDV +VHPSPVAS FY +DH IELM+ A++SAVPP LP +I +SIG RD+GGMA G R+GT L +NF F++ P+LPDYKK++ R
Sbjct: 28 LAIPTLFWLVAYLLPQIFMSFRPVPDLKKRYDAEWALVTGSGSGIGKALAFKLASQGLNVVLVSIDDDFLKQTMKDIQAEYPKLKFRSVGVTFSPGVPYLDKIKEATKDIEVKIVFNNAGFIVTGFLDQSPLGKLLANVECNTTACVNITHHFLSIMVAKKWKGCVVYTSSVAGFIPTPFAAMYASTKAFLSQMACCLHIEVQNLGIDVCAVHPSPVASNFYDKVDHKIELMEAAQKSAVPPQDLPNDIFRSIGACALRDLGGMAWGTRMGTFFLPFNFFTEMFTVAAPFLPDYKKHNQTR 328
BLAST of mRNA_E-siliculosus-1a_F_contig1209.1333.1 vs. uniprot
Match: A0A7S2K5G0_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2K5G0_9STRA) HSP 1 Score: 347 bits (890), Expect = 6.050e-112 Identity = 175/309 (56.63%), Postives = 221/309 (71.52%), Query Frame = 1
Query: 58 TTVALGFLAVPTIVWLVTYFVPLLLVAVLPPQNLKKKY-GAKWALVTGGGSGIGKALVEELALQGLNVVIVSMDDQFLADTFALVSSKFPGQEFRKVGATFSPGVDYMDKIKAVTSDINVQCVFNNAGFIVTGFYESSAEGKQMANLECNATAAAKISHHFVGRMIREKQKGCVVFTSSVAAYCPTPFSAMYGATKAFLSNLAASLSVEVRCKGIDVLSVHPSPVASQFYSNLDHTIELMDKAKESAVPPNVLPREILKSIGRVVWRDIGGMAVGVRVGTKMLSYNFLATAFSMVGPYLPDYKKNDVGR 981
TT+ L LA PT++W V+Y +P L++A P +LKKKY GA WALVTGGGSGIG AL +LA QG NVVI S+DD +L T + + +P EFR VG FSPG DYM KI T DI+VQ +FNNAGFIVTGF + + GK +AN+ECNATA+ I+HHFV ++ +K KGC+VFTSSVA + PTPF+AMY +TKAF+S A L++EVR GIDV +VHPSPVAS FY +DH IELM+ A++SAVPP LP EI++SIG RD+G MA R+GT + YNF F+ P+LPDYKK++ R
Sbjct: 7 TTIILYVLAAPTVIWFVSYLIPQLIMAFRPVPDLKKKYPGASWALVTGGGSGIGAALCFKLASQGFNVVICSLDDDYLKGTVSQLREMYPKLEFRAVGCIFSPGQDYMAKIIDATKDIDVQLIFNNAGFIVTGFLDQAPLGKLLANVECNATASVSITHHFVRLLVSKKLKGCIVFTSSVAGFIPTPFAAMYASTKAFVSQFACCLNIEVRNLGIDVCAVHPSPVASNFYDKVDHKIELMEAAQKSAVPPQELPDEIIRSIGMCALRDVGSMAWSTRMGTWFIPYNFFTGLFATAAPFLPDYKKHNKSR 315
BLAST of mRNA_E-siliculosus-1a_F_contig1209.1333.1 vs. uniprot
Match: A0A7S0UI44_9STRA (Hypothetical protein n=1 Tax=Pseudo-nitzschia delicatissima TaxID=44447 RepID=A0A7S0UI44_9STRA) HSP 1 Score: 345 bits (884), Expect = 6.980e-111 Identity = 173/306 (56.54%), Postives = 215/306 (70.26%), Query Frame = 1
Query: 64 VALGFLAVPTIVWLVTYFVPLLLVAVLPPQNLKKKYGAKWALVTGGGSGIGKALVEELALQGLNVVIVSMDDQFLADTFALVSSKFPGQEFRKVGATFSPGVDYMDKIKAVTSDINVQCVFNNAGFIVTGFYESSAEGKQMANLECNATAAAKISHHFVGRMIREKQKGCVVFTSSVAAYCPTPFSAMYGATKAFLSNLAASLSVEVRCKGIDVLSVHPSPVASQFYSNLDHTIELMDKAKESAVPPNVLPREILKSIGRVVWRDIGGMAVGVRVGTKMLSYNFLATAFSMVGPYLPDYKKNDVGR 981
V L A PT W+V Y +P L VA P NLK +Y A WALVTGGGSGIGKAL +LA QGLNVVIVS+DD L T + FP EFR VG F+PGVDY+ +I+ T DI V VFNNAGF+VTGF++ + GK + N+ECNATAA ISHHF +++ K+KGC+VFTSSVA + PTPFS MYGATKAF+S LA SL +E++ GIDV +VHPSPVAS FY++LDH I++++ A + AVPP LP +I +SIG RD+GGMAV R+GT L YNF F+ PYLPD+K ++ R
Sbjct: 21 VVLAVFAFPTAFWVVMYSLPQLYVAFRPVPNLKTRYDASWALVTGGGSGIGKALSFKLARQGLNVVIVSLDDDILKATMVQLKETFPKLEFRCVGVNFAPGVDYLKQIQEATKDIEVSIVFNNAGFLVTGFFDQAPLGKLLVNMECNATAAVNISHHFASKLVSAKKKGCIVFTSSVAGFIPTPFSGMYGATKAFVSQLACSLHIELQSLGIDVCAVHPSPVASNFYNDLDHKIDILESACKQAVPPEDLPDDIFRSIGCCALRDLGGMAVSSRMGTFFLPYNFFTEMFAAAAPYLPDWKTHNKTR 326 The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig1209.1333.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-siliculosus-1a_F_contig1209.1333.1 >prot_E-siliculosus-1a_F_contig1209.1333.1 ID=prot_E-siliculosus-1a_F_contig1209.1333.1|Name=mRNA_E-siliculosus-1a_F_contig1209.1333.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=313bp MVCLTTVALGFLAVPTIVWLVTYFVPLLLVAVLPPQNLKKKYGAKWALVTback to top mRNA from alignment at E-siliculosus-1a_F_contig1209:22645..28331- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-siliculosus-1a_F_contig1209.1333.1 ID=mRNA_E-siliculosus-1a_F_contig1209.1333.1|Name=mRNA_E-siliculosus-1a_F_contig1209.1333.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=5687bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1209:22645..28331- (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top Coding sequence (CDS) from alignment at E-siliculosus-1a_F_contig1209:22645..28331- >mRNA_E-siliculosus-1a_F_contig1209.1333.1 ID=mRNA_E-siliculosus-1a_F_contig1209.1333.1|Name=mRNA_E-siliculosus-1a_F_contig1209.1333.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=1878bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1209:22645..28331- (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top |