mRNA_E-siliculosus-1a_F_contig1208.1330.1 (mRNA) Ectocarpus siliculosus Ec863f_EcPH12_90f female
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Overview
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig1208.1330.1 vs. uniprot
Match: D8LCG7_ECTSI (tRNA-5-taurinomethyluridine 2-sulfurtransferase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCG7_ECTSI) HSP 1 Score: 799 bits (2064), Expect = 2.010e-290 Identity = 413/434 (95.16%), Postives = 417/434 (96.08%), Query Frame = 1
Query: 1 EEDLAYATAVCEQAGVPLEVVPLQREYWDQVVSYTVREAREGRTPNPDVMCNSRIKFGMFYDHVGKHFRHVATGHYARLEHSGGSDDANATPNDRSAAXXXXXAGTEEAPVRVAAGSDRGRVRLLLSPDAVKDQTYFLCALTQDQLRKALFPLGVYTKDQIRELAESYDLPTKHRKDSQGICFLGKLKFDEFLQHYLGTSPGAIVDQTGRHIGEHKGLWFHTIGQRKGVGPGLVPGVVNLGPWYVADKDMESNVLVVTNDREAIASPREVFRVEALQWISGRPPAELARDGSMRLRVKTRHGPQMRDCLLRLVPEVAPGGSGGRAG-AEATAEDGVGSPTRGYVNLDNKDSALAPGQFAAFYLGDECVGSGVMCGWSAAAAAAVGVVAGGEGGIAAGLESGGGSVLRRLEKERDGVLEYGGTASAAAPAAAMRQ 1299
EEDLAYATAVCEQAGVPLEVVPLQREYWDQVVSYTVREAREGRTPNPDVMCNSRIKFGMFYDHVGKHFRHVATGHYARLEHSGGSDDANATP+DRSA XXXXX TEE PVRVAAGSDRGRVRLLLSPDAVKDQTYFLCALTQDQLRKALFPLGVYTKDQIRELAESYDLPTKHRKDSQGICFLGKLKFDEFLQHYLGTSPGAIVDQTGRHIGEHKGLWFHTIGQRKGVGPGLVPGVVNLGPWYVADKDME NVLVVTNDREAIASPREVFRVEALQWISGRPPAELARD SMRLRVKTRHGPQMRDCLLRLVPEVAPG SGGRAG AEAT ED VGSPTRGYVNLD+KDSALAPGQFAAFYLG ECVGSGVMCGWSAAAAAAVGVVAGGEGGIAAGLES GG LRRLE+ER GVLE GTASAAAPAAA+RQ
Sbjct: 45 EEDLAYATAVCEQAGVPLEVVPLQREYWDQVVSYTVREAREGRTPNPDVMCNSRIKFGMFYDHVGKHFRHVATGHYARLEHSGGSDDANATPSDRSAXXXXXXXXTEEPPVRVAAGSDRGRVRLLLSPDAVKDQTYFLCALTQDQLRKALFPLGVYTKDQIRELAESYDLPTKHRKDSQGICFLGKLKFDEFLQHYLGTSPGAIVDQTGRHIGEHKGLWFHTIGQRKGVGPGLVPGVVNLGPWYVADKDMERNVLVVTNDREAIASPREVFRVEALQWISGRPPAELARDRSMRLRVKTRHGPQMRDCLLRLVPEVAPGDSGGRAGGAEATVEDRVGSPTRGYVNLDSKDSALAPGQFAAFYLGGECVGSGVMCGWSAAAAAAVGVVAGGEGGIAAGLESEGGLALRRLEEERGGVLERRGTASAAAPAAAIRQ 478
BLAST of mRNA_E-siliculosus-1a_F_contig1208.1330.1 vs. uniprot
Match: A0A6H5J9B2_9PHAE (tRNA-5-taurinomethyluridine 2-sulfurtransferase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J9B2_9PHAE) HSP 1 Score: 810 bits (2092), Expect = 1.790e-288 Identity = 412/433 (95.15%), Postives = 414/433 (95.61%), Query Frame = 1
Query: 1 EEDLAYATAVCEQAGVPLEVVPLQREYWDQVVSYTVREAREGRTPNPDVMCNSRIKFGMFYDHVGKHFRHVATGHYARLEHSGGSDDANATPNDRSAAXXXXXAGTEEAPVRVAAGSDRGRVRLLLSPDAVKDQTYFLCALTQDQLRKALFPLGVYTKDQIRELAESYDLPTKHRKDSQGICFLGKLKFDEFLQHYLGTSPGAIVDQTGRHIGEHKGLWFHTIGQRKGVGPGLVPGVVNLGPWYVADKDMESNVLVVTNDREAIASPREVFRVEALQWISGRPPAELARDGSMRLRVKTRHGPQMRDCLLRLVPEVAPGGSGGRAGAEATAEDGVGSPTRGYVNLDNKDSALAPGQFAAFYLGDECVGSGVMCGWSAAAAAAVGVVAGGEGGIAAGLESGGGSVLRRLEKERDGVLEYGGTASAAAPAAAMRQ 1299
EEDLAYATAVCEQAGVPLEVVPLQREYWDQVVSYTVREAREGRTPNPDVMCNSRIKFGMFYDHVGKHFRHVATGHYARLEHSGGS D NATPNDR+AA AGTEEAPVRVAAGSDRGRVRLLLSPDAVKDQTYFLCALTQDQLRKALFPLGVYTKDQIRELAESYDLPTKHRKDSQGICFLGKLKFDEFLQHYLGTSPGAIVDQTGRHIGEHKGLWFHTIGQRKGVGPGLVPGVVNLGPWYVADKDMESNVLVVTNDREAIASPREVFRVEALQWISGRPPAELARDGSMRLRVKTRHGPQMRDC LRLVPEVA G G AGAEATAEDGVGSPTRGYVNLDNKDSALAPGQFAAFYLGDECVGSGVMCGWSAAAAAAVGVVAGGEG IAAGLE GGGS LRRLE+ER GVLEY GTAS AAPAAAMRQ
Sbjct: 447 EEDLAYATAVCEQAGVPLEVVPLQREYWDQVVSYTVREAREGRTPNPDVMCNSRIKFGMFYDHVGKHFRHVATGHYARLEHSGGSVDNNATPNDRNAAAAA--AGTEEAPVRVAAGSDRGRVRLLLSPDAVKDQTYFLCALTQDQLRKALFPLGVYTKDQIRELAESYDLPTKHRKDSQGICFLGKLKFDEFLQHYLGTSPGAIVDQTGRHIGEHKGLWFHTIGQRKGVGPGLVPGVVNLGPWYVADKDMESNVLVVTNDREAIASPREVFRVEALQWISGRPPAELARDGSMRLRVKTRHGPQMRDCFLRLVPEVAHGDGSGGAGAEATAEDGVGSPTRGYVNLDNKDSALAPGQFAAFYLGDECVGSGVMCGWSAAAAAAVGVVAGGEGXIAAGLEPGGGSALRRLEEERGGVLEYRGTASGAAPAAAMRQ 877
BLAST of mRNA_E-siliculosus-1a_F_contig1208.1330.1 vs. uniprot
Match: A0A835YKA8_9STRA (tRNA-5-taurinomethyluridine 2-sulfurtransferase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YKA8_9STRA) HSP 1 Score: 374 bits (961), Expect = 7.680e-124 Identity = 201/375 (53.60%), Postives = 241/375 (64.27%), Query Frame = 1
Query: 1 EEDLAYATAVCEQAGVPLEVVPLQREYWDQVVSYTVREAREGRTPNPDVMCNSRIKFGMFYDHVGKHFRHVATGHYARLEHSGGSDDANATPNDRSAAXXXXXAGTEEAPVRVAAGSDRGRVRLLLSPDAVKDQTYFLCALTQDQLRKALFPLGVYTKDQIRELAESYDLPTKHRKDSQGICFLGKLKFDEFLQHYLGTSPGAIVD-QTGRHIGEHKGLWFHTIGQRKGVGPGLVPGVVNLGPWYVADKDMESNVLVVTNDREAIASPREVFRVEALQWISGRPPAELARDGSMRLRVKTRHGPQMRDCLLRLVPEVAPGGSGGRAGAEATAEDGVGSPTRGYVN--LDNKDSALAPGQFAAFYLGDECVGSGVM 1116
EEDL +A AVC+QA VPLEVV LQREYWD VV YTV EAR GRTPNPD+MCN+RIKFGMF+++VG+HF+ VATGHYA + G A G G RLL SPD VKDQTYFLC L+Q QL +ALFP+G TK+++R AE ++LPTK R DSQGICFLGKLKF++FL+ +LG +PG V+ +TG IG H+GLWFHTIGQR+GVGP L P ++ GPW+VA KD+ SN LVVTND A+ R FRVE L WIS A + G+ L VKTRHGP ++ CLLRL G G AG L+ KDS LAPGQFAAFY + C+GSGV+
Sbjct: 63 EEDLQFAQAVCDQARVPLEVVSLQREYWDLVVGYTVAEARAGRTPNPDIMCNNRIKFGMFFEYVGRHFKKVATGHYAVVAPGEGGGSG-------------------------AEGEGGGEARLLRSPDPVKDQTYFLCGLSQAQLSRALFPVGALTKEEVRRQAERFNLPTKARPDSQGICFLGKLKFEDFLRAHLGEAPGPCVELETGAVIGRHRGLWFHTIGQRRGVGPVLHPTEIHRGPWFVARKDVPSNTLVVTNDYAAVNEARTQFRVEGLHWISPVAAAPVLSSGA-ELLVKTRHGPAIQRCLLRLERPEGAGEGGVEAGXXXXXXXXXXXXXTSATCTLLEGKDSGLAPGQFAAFYCDEVCLGSGVI 411
BLAST of mRNA_E-siliculosus-1a_F_contig1208.1330.1 vs. uniprot
Match: L1IST2_GUITC (tRNA-5-taurinomethyluridine 2-sulfurtransferase n=3 Tax=Guillardia theta TaxID=55529 RepID=L1IST2_GUITC) HSP 1 Score: 362 bits (930), Expect = 6.400e-119 Identity = 189/373 (50.67%), Postives = 241/373 (64.61%), Query Frame = 1
Query: 1 EEDLAYATAVCEQAGVPLEVVPLQREYWDQVVSYTVREAREGRTPNPDVMCNSRIKFGMFYDHVGKHFRHVATGHYARLEHSGGSDDANATPNDRSAAXXXXXAGTEEAPVRVAAGSDRGRVRLLLSPDAVKDQTYFLCALTQDQLRKALFPLGVYTKDQIRELAESYDLPTKHRKDSQGICFLGKLKFDEFLQHYLGTSPGAIVD-QTGRHIGEHKGLWFHTIGQRKGVGPGLVPGVVNLGPWYVADKDMESNVLVVTNDREAIASPREVFRVEALQWISGRPPAELARDGSMRLRVKTRHGPQMRDCLLRLVPEVAPGGSGGRAGAEATAEDGVGSPTRGYVNLDNKDSALAPGQFAAFYLGDECVGSGVM 1116
EED +YA++V EQ VPLE + LQ EYW+QVV Y +REA+ GRTPNPD+MCNSRIKFGMF ++VGKHF VA+GHYA H DD P+ RL++SPD VKDQTYFLC L QDQL+ ALFP+G YTK+++RELA ++LPT+ RKDSQGICFLGKLKF++F+ H+LG PG ++D TGR +GEH+GLWF+TIGQRKG+G V +LGPW+VA KD E N+L V+N + I PR F VE + W++G L D ++RLR+KTRHGP + D LL L S G+ G V+LD +DS LAPGQ+AA Y G+EC+G G++
Sbjct: 92 EEDWSYASSVAEQLKVPLESISLQEEYWEQVVEYLIREAKMGRTPNPDIMCNSRIKFGMFEEYVGKHFSRVASGHYAVSCH----DDVGTRPS-----------------------------RLMMSPDKVKDQTYFLCNLRQDQLKHALFPIGGYTKEKVRELAREFNLPTQRRKDSQGICFLGKLKFEDFVGHHLGEDPGPVIDFHTGRELGEHRGLWFYTIGQRKGLGS-ATRKVTHLGPWFVAGKDRERNMLYVSNQYDVIEGPRRSFDVEQINWMAG----SLPEDDALRLRIKTRHGPNIHDGLLTL--------SQGKLS--------------GRVSLDGRDSGLAPGQWAALYDGEECIGGGMI 404
BLAST of mRNA_E-siliculosus-1a_F_contig1208.1330.1 vs. uniprot
Match: A0A7S0EE01_9CRYP (tRNA-5-taurinomethyluridine 2-sulfurtransferase n=1 Tax=Hanusia phi TaxID=3032 RepID=A0A7S0EE01_9CRYP) HSP 1 Score: 360 bits (925), Expect = 2.440e-115 Identity = 190/373 (50.94%), Postives = 242/373 (64.88%), Query Frame = 1
Query: 1 EEDLAYATAVCEQAGVPLEVVPLQREYWDQVVSYTVREAREGRTPNPDVMCNSRIKFGMFYDHVGKHFRHVATGHYARLEHSGGSDDANATPNDRSAAXXXXXAGTEEAPVRVAAGSDRGRVRLLLSPDAVKDQTYFLCALTQDQLRKALFPLGVYTKDQIRELAESYDLPTKHRKDSQGICFLGKLKFDEFLQHYLGTSPGAIVD-QTGRHIGEHKGLWFHTIGQRKGVGPGLVPGVVNLGPWYVADKDMESNVLVVTNDREAIASPREVFRVEALQWISGRPPAELARDGSMRLRVKTRHGPQMRDCLLRLVPEVAPGGSGGRAGAEATAEDGVGSPTRGYVNLDNKDSALAPGQFAAFYLGDECVGSGVM 1116
EED +YAT+V E+ VP+E + LQ EYW+QVV Y + EA+ GRTPNPD+MCNSRIKFGMF +VG+HF VA+GHYA H DD + G RLL+SPD +KDQTYFLC L Q+QL+ ALFP+G YTK+Q+RELA +DLPT+ RKDSQGICFLGKLKF++F+ H+LG +PG +VD TGR +GEH+GLWF+TIGQRKG+G V +LGPW+VA KD + NVL V+N + I PR F +E++ WISG P RD +RLR+KTRHGP + + LL L +PG GR V+L+ +DS LAPGQ+AA Y G+ECVG G++
Sbjct: 310 EEDWSYATSVAERLNVPIESISLQEEYWEQVVDYLIGEAKLGRTPNPDIMCNSRIKFGMFEKYVGQHFSRVASGHYAVSLH----DD-----------------------------KEGGVSRLLMSPDKIKDQTYFLCNLRQEQLKHALFPIGGYTKEQVRELAREFDLPTQKRKDSQGICFLGKLKFEDFVGHHLGENPGPVVDFHTGRELGEHRGLWFYTIGQRKGLGS-ATRRVTHLGPWFVAGKDRDKNVLYVSNQYDTIDGPRRGFDIESINWISGEAP----RDEEVRLRIKTRHGPGIHNGLLTL----SPGRLSGR------------------VSLEGRDSGLAPGQWAALYDGEECVGGGMI 622
BLAST of mRNA_E-siliculosus-1a_F_contig1208.1330.1 vs. uniprot
Match: A0A7S4DG19_HETAK (tRNA-5-taurinomethyluridine 2-sulfurtransferase n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4DG19_HETAK) HSP 1 Score: 340 bits (873), Expect = 1.810e-111 Identity = 182/352 (51.70%), Postives = 219/352 (62.22%), Query Frame = 1
Query: 67 LQREYWDQVVSYTVREAREGRTPNPDVMCNSRIKFGMFYDHVGKHFRHVATGHYARLEHSGGSDDANATPNDRSAAXXXXXAGTEEAPVRVAAGSDRGRVRLLLSPDAVKDQTYFLCALTQDQLRKALFPLGVYTKDQIRELAESYDLPTKHRKDSQGICFLGKLKFDEFLQHYLGTSPGAIVDQTGRHI-GEHKGLWFHTIGQRKGVGPGLVPGVVNLGPWYVADKDMESNVLVVTNDREAIAS--PREVFRVEALQWISGRPPAELARDGSMRLRVKTRHGPQMRDCLLRLVPEVAPGGSGGRAGAEATAEDGVGSPTRGYVNLDNKDSALAPGQFAAFYLG-DECVGSG 1110
LQ+EYWD+VV YT+ EA GRTPNPD+MCN+RIKFGMFY++ G+ FRHVATGHYAR S T RLL SPD VKDQTYFL L QDQ+ KALFP+G YTK +IRELAE +DLPTK RKDSQGICFLGKLKFD+FL HYLG +PG ++D+ + GEHKGLW+HTIGQRKG+GP L G VN GPWYV +K+M N L+V+N E I+S V V+ QWISG P +L M+L+VK RHGP + ++ V GS T +V L+N DS +APGQFAAFY DEC+G+G
Sbjct: 2 LQKEYWDKVVRYTIAEAEAGRTPNPDIMCNARIKFGMFYEYAGRRFRHVATGHYARSHTEINSKGEAVT-------------------------------RLLCSPDPVKDQTYFLSTLGQDQISKALFPVGEYTKSEIRELAEKFDLPTKMRKDSQGICFLGKLKFDDFLAHYLGENPGLVIDEESEEVVGEHKGLWYHTIGQRKGLGPSLFAGQVNRGPWYVIEKNMRENKLIVSNSAEKISSILRENVLVVQDFQWISGNIPEKLKTAKKMKLKVKLRHGPNTQSAWIQKVN---------------------GSNTAIFVELENNDS-IAPGQFAAFYTDEDECLGAG 300
BLAST of mRNA_E-siliculosus-1a_F_contig1208.1330.1 vs. uniprot
Match: A0A0G4FIA7_VITBC (tRNA-5-taurinomethyluridine 2-sulfurtransferase n=2 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A0G4FIA7_VITBC) HSP 1 Score: 345 bits (885), Expect = 6.060e-110 Identity = 175/371 (47.17%), Postives = 228/371 (61.46%), Query Frame = 1
Query: 1 EEDLAYATAVCEQAGVPLEVVPLQREYWDQVVSYTVREAREGRTPNPDVMCNSRIKFGMFYDHVGKHFRHVATGHYARLEHSGGSDDANATPNDRSAAXXXXXAGTEEAPVRVAAGSDRGRVRLLLSPDAVKDQTYFLCALTQDQLRKALFPLGVYTKDQIRELAESYDLPTKHRKDSQGICFLGKLKFDEFLQHYLGTSPGAIVDQTGRHI-GEHKGLWFHTIGQRKGVGPGLVPGVVNLGPWYVADKDMESNVLVVTNDREAIASPREVFRVEALQWISGRPPAELARDGSMRLRVKTRHGPQMRDCLLRLVPEVAPGGSGGRAGAEATAEDGVGSPTRGYVNLDNKDSALAPGQFAAFYLGDECVGSG 1110
EEDL +A C+Q +PLE+V LQ YWD VV YT+ EA GRTPNPDVMCN+R+KFG F D G+HF+ VATGHYA++ + G VRL SPD +KDQTYFLC L+Q+QL A FP+G + K ++R+LA Y LPT R+DSQGICFLGKL++++FL HYLG +PG IVD G + GEH GLW HT+GQRKG+GP L +V+ GP++V KD ++N L+VTND +AI PR+ +VE++ WI+G+PPA L+ G + V+ RHGP+ +RL+ DG G V+L+ KDS +APGQF AFY GDEC+G G
Sbjct: 257 EEDLRFARDTCDQLKIPLELVSLQDSYWDSVVRYTISEAAAGRTPNPDVMCNTRVKFGAFCDDHGRHFKRVATGHYAQVRRD----------------------------------QENGPVRLFRSPDRIKDQTYFLCGLSQEQLAMADFPIGTFDKARVRQLARDYSLPTASRRDSQGICFLGKLRWEDFLTHYLGKNPGPIVDVAGGELLGEHHGLWLHTVGQRKGLGPYLRDKMVHRGPFFVVGKDPDTNTLLVTNDYDAIDRPRQELQVESIGWIAGKPPASLSTAGDAIMEVQLRHGPKTHMARVRLL-------------------DGDGESAE--VHLEEKDSGIAPGQFVAFYAGDECLGGG 572
BLAST of mRNA_E-siliculosus-1a_F_contig1208.1330.1 vs. uniprot
Match: A0A7S2RGR0_9STRA (tRNA-5-taurinomethyluridine 2-sulfurtransferase n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RGR0_9STRA) HSP 1 Score: 329 bits (844), Expect = 8.060e-107 Identity = 175/376 (46.54%), Postives = 233/376 (61.97%), Query Frame = 1
Query: 1 EEDLAYATAVCEQAGVPLEVVPLQREYWDQVVSYTVREAREGRTPNPDVMCNSRIKFGMFYDHVGKHFRHVATGHYARLEHSGGSDDANATPNDRSAAXXXXXAGTEEAPVRVAAGSDRGRVRLLLSPDAVKDQTYFLCALTQDQLRKALFPLGVYTKDQIRELAESYDLPTKHRKDSQGICFLGKLKFDEFLQHYLGTSPGAIVD-QTGRHIGEHKGLWFHTIGQRKGVGPGLVPGVVNLGPWYVADKDMESNVLVVTNDREAIASPREVFRVEALQWISGRPPAELARD---GSMRLRVKTRHGPQMRDCLLRLVPEVAPGGSGGRAGAEATAEDGVGSPTRGYVNLDNKDSALAPGQFAAFYLGDECVGSGVM 1116
EED YA+AV +AGVPLE V +Q++YW+ VV++T+ EAR GRTPNPD++CNSRIKFGMFY+ VG+HF V +GHYAR + G L SPD VKDQTYFL LTQ+Q+ A FP+G Y K QIR+LA LPT+ RKDSQGICFLGKLK+D+FL+HYLG +PG +++ +T + +G+H+GL FHTIGQR+G+G L P ++ GPW+VA KD SN L VT + +A+ +PR F+VE + WISG PP L + G + L V+ RHGP +R + + SGG+ + V++D +DS LAPGQ+AAFY D C+G+GV+
Sbjct: 21 EEDWDYASAVARKAGVPLEAVSMQKDYWETVVAHTIDEARAGRTPNPDILCNSRIKFGMFYEEVGRHFSKVISGHYAR-----------------------------------SVPGASGLQELRRSPDRVKDQTYFLSTLTQEQISSAFFPVGDYDKAQIRDLARDLALPTQARKDSQGICFLGKLKWDDFLEHYLGQAPGEVIELETQKILGQHRGLHFHTIGQRRGIGRVLRPDEIHRGPWFVAAKDPVSNTLFVTTNYDAVTAPRSSFQVENVNWISGSPPVGLRTEDAPGPVSLTVQVRHGPTAYPGTVRHSRDDS--NSGGQGVFD--------------VSIDGRDSGLAPGQYAAFYDEDRCLGAGVI 345
BLAST of mRNA_E-siliculosus-1a_F_contig1208.1330.1 vs. uniprot
Match: A0A5J4Z0A3_PORPP (tRNA-5-taurinomethyluridine 2-sulfurtransferase n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4Z0A3_PORPP) HSP 1 Score: 335 bits (858), Expect = 1.940e-105 Identity = 183/374 (48.93%), Postives = 227/374 (60.70%), Query Frame = 1
Query: 1 EEDLAYATAVCEQAGVPLEVVPLQREYWDQVVSYTVREAREGRTPNPDVMCNSRIKFGMFYDHVGKHFRHVATGHYARLEHSGGSDDANATPNDRSAAXXXXXAGTEEAPVRVAAGSDRGRVRLLLSPDAVKDQTYFLCALTQDQLRKALFPLGVYTKDQIRELAESYDLPTKHRKDSQGICFLGKLKFDEFLQHYLGTSPGAIVD-QTGRHIGEHKGLWFHTIGQRKGVGPGLVPGVVNLGPWYVADKDMESNVLVVTNDREAIASPREVFRVEALQWIS-GRPPAELARDGSMRLRVKTRHGPQMRDCLLRLVPEVAPGGSGGRAGAEATAEDGVGSPTRGYVNLDNKDSALAPGQFAAFYLGDECVGSGVM 1116
EED+AYATAVCEQAG+ L + LQ +YWDQVVSYT+ EAR GRTPNPDVMCNSRIKFG+F D VGKHF+ VA+GHYAR+E E P G++ L S D KDQTYFL LT QL KA+FP+G+Y K+ +R LAE +DLP K RKDSQGICFLGKL FD FL+HYLGT GA+VD TG +G H+G WF+T+GQRKG+G + G GPW+V KD + N++ V+N +A R+ F V+ L WI A L + L VK RHGP++ C L L D + P+RG V L+ ++S +APGQFA FY G C+GSGV+
Sbjct: 300 EEDVAYATAVCEQAGLQLHTLDLQHDYWDQVVSYTISEARAGRTPNPDVMCNSRIKFGVFLDRVGKHFKRVASGHYARIEID------------------------ETVP---------GKLLLSRSVDTHKDQTYFLANLTTAQLSKAMFPIGMYDKNTVRMLAERFDLPNKSRKDSQGICFLGKLPFDAFLEHYLGTQAGALVDYDTGIQLGSHRGFWFYTLGQRKGIG---LAG----GPWFVVSKDPQQNIVYVSNKYDAEDKERDSFGVQHLNWIGRASEEASLLETPTQDLIVKIRHGPKLHKCTLSL--------------------DAL-DPSRGSVKLEERNSGIAPGQFAVFYKGPVCLGSGVI 612
BLAST of mRNA_E-siliculosus-1a_F_contig1208.1330.1 vs. uniprot
Match: A0A0F9YVQ7_9BACT (tRNA-specific 2-thiouridylase MnmA n=1 Tax=candidate division TM6 bacterium GW2011_GWF2_32_72 TaxID=1619079 RepID=A0A0F9YVQ7_9BACT) HSP 1 Score: 325 bits (833), Expect = 2.480e-105 Identity = 174/373 (46.65%), Postives = 220/373 (58.98%), Query Frame = 1
Query: 1 EEDLAYATAVCEQAGVPLEVVPLQREYWDQVVSYTVREAREGRTPNPDVMCNSRIKFGMFYDHVGKHFRHVATGHYARLEHSGGSDDANATPNDRSAAXXXXXAGTEEAPVRVAAGSDRGRVRLLLSPDAVKDQTYFLCALTQDQLRKALFPLGVYTKDQIRELAESYDLPTKHRKDSQGICFLGKLKFDEFLQHYLGTSPGAIVD-QTGRHIGEHKGLWFHTIGQRKGVGPGLVPGVVNLGPWYVADKDMESNVLVVTNDREAIASPREVFRVEALQWISGRPPAELARDGSMRLRVKTRHGPQMRDCLLRLVPEVAPGGSGGRAGAEATAEDGVGSPTRGYVNLDNKDSALAPGQFAAFYLGDECVGSGVM 1116
EEDL+YA AVCEQAGVPLEV+ LQ+EYWD+VVSYT+ E + GRTPNPD++CN R+KFG F+D + F VATGHYAR+E GR L ++PD +KDQTYFL L+Q QL KALFPLG Y K Q+RELA+ +DLP K RKDSQGICFLGKLKFDEFL+++LG PG I++ +TG+ + EH G W++TIGQR+G G G GPWYV KD E NV+ ++ + + R+ F V WIS +P +L+VK RHG Q+ +C L + E R V +D +D +A GQFA FY GDECVGSGV+
Sbjct: 49 EEDLSYAKAVCEQAGVPLEVISLQKEYWDRVVSYTISEVKAGRTPNPDILCNQRVKFGAFFDKISPEFEKVATGHYARVEEKD------------------------------------GRYLLKMTPDPIKDQTYFLSHLSQAQLSKALFPLGEYNKGQVRELAQRFDLPNKVRKDSQGICFLGKLKFDEFLKYHLGELPGDIIEFETGKKLKEHAGFWYYTIGQRRGSGLGG-------GPWYVVAKDPEKNVVYMSKNYFSKDKFRDEFVVSGFNWISQKPKT------GEQLQVKLRHGAQIYNCKLDFLSE-----------------------DRALVKIDEQDQGIASGQFAVFYKGDECVGSGVI 349 The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig1208.1330.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90) Total hits: 25
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The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-siliculosus-1a_F_contig1208.1330.1 >prot_E-siliculosus-1a_F_contig1208.1330.1 ID=prot_E-siliculosus-1a_F_contig1208.1330.1|Name=mRNA_E-siliculosus-1a_F_contig1208.1330.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=434bp EEDLAYATAVCEQAGVPLEVVPLQREYWDQVVSYTVREAREGRTPNPDVMback to top mRNA from alignment at E-siliculosus-1a_F_contig1208:32915..35584- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-siliculosus-1a_F_contig1208.1330.1 ID=mRNA_E-siliculosus-1a_F_contig1208.1330.1|Name=mRNA_E-siliculosus-1a_F_contig1208.1330.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=2670bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1208:32915..35584- (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top Coding sequence (CDS) from alignment at E-siliculosus-1a_F_contig1208:32915..35584- >mRNA_E-siliculosus-1a_F_contig1208.1330.1 ID=mRNA_E-siliculosus-1a_F_contig1208.1330.1|Name=mRNA_E-siliculosus-1a_F_contig1208.1330.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=2604bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1208:32915..35584- (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top |