mRNA_E-siliculosus-1a_F_contig12051.1316.1 (mRNA) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E-siliculosus-1a_F_contig12051.1316.1
Unique NamemRNA_E-siliculosus-1a_F_contig12051.1316.1
TypemRNA
OrganismEctocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Homology
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BLAST of mRNA_E-siliculosus-1a_F_contig12051.1316.1 vs. uniprot
Match: A0A2A3XCZ1_9GAMM (Aconitate hydratase n=5 Tax=Halomonas TaxID=2745 RepID=A0A2A3XCZ1_9GAMM)

HSP 1 Score: 1075 bits (2780), Expect = 0.000e+0
Identity = 535/572 (93.53%), Postives = 554/572 (96.85%), Query Frame = 1 
Query:    1 LVDWQAEGKSNREIGYRPARVLMQDFTGVPGVVDLASMRAAVEKLGEDPAKINPLTPVDLVIDHSVMVDKFGNAAAFQENVDIEMQRNRERYEFLRWGQQAFDNFSVVPPGTGICHQVNLEYLGKTVWTKDDDGKSFAYPDTLVGTDSHTTMINGLGVLGWGVGGIEAEAAMLGQPVSMLIPEVIGFKLTGKLREGITATDLVLTVTEMLRKKGVVGKFVEFYGDGLKDLPLADRATIANMAPEYGATCGFFPVDAETLNYMRLTGREDNQVALVEAYSKAQGLWREPNDEPIFTDALHLDMTEVEASLAGPKRPQDRVALQDMSAAFSKFMQEDTKANSTEQGKFSSEGGQTAVGVERSFEHDTSQAVKLNDHSFSLDPGAVVIAAITSCTNTSNPSVMMAAGLLARKAREKGLTTQPWVKTSLAPGSKVVTDYLKAAGLNDDLDELGFNLVGYGCTTCIGNSGPLPDEIEQAINDGDLAVASVLSGNRNFEGRVHPLVKTNWLASPPLVVAYALAGNVQRDLTKDPIGEGSNGEPVYLKDIWPSQAEIASAVEKVNTEMFRKEYGAVFEG 1716
            LVDWQ EGKS+REIGYRPARVLMQDFTGVPGVVDLASMRAAVE L EDPAKINPLTPVDLVIDHSVMVD FGNA AFQENVDIEMQRNRERYEFLRWGQQAFDNF VVPPGTGICHQVNLEYLGKTVWTK++DGKSFAYPDTLVGTDSHTTMINGLGVLGWGVGGIEAEAAMLGQPVSMLIPEVIGFKLTGK+REGITATDLVLTVTEMLRKKGVVGKFVEFYGDGLKDLPLADRATIANMAPEYGATCGFFPVD ETLNY+RLTGRED+QVALVEAYSKAQGLWREPNDEPIFTDAL LDMTEV ASLAGPKRPQDRVALQDM++AF KFMQEDTKAN+TE+GKFSSEGGQTAVGVERSF+ DTSQAVKLND  FSLDPGAVVIAAITSCTNTSNPSVMMAAGLLARKAREKGLTTQPWVKTSLAPGSKVVTDYL AAGLN+DLD LGFNLVGYGCTTCIGNSGPL DEIEQAIN GDLAVASVLSGNRNFEGRVHPLVKTNWLASPPLVVAYALAGNVQRDLT++P+G+ SNGEPVYLKDIWP+QAEIA+AVEKVNT+MFRKEYGAVFEG
Sbjct:   64 LVDWQTEGKSSREIGYRPARVLMQDFTGVPGVVDLASMRAAVESLNEDPAKINPLTPVDLVIDHSVMVDNFGNAGAFQENVDIEMQRNRERYEFLRWGQQAFDNFRVVPPGTGICHQVNLEYLGKTVWTKEEDGKSFAYPDTLVGTDSHTTMINGLGVLGWGVGGIEAEAAMLGQPVSMLIPEVIGFKLTGKMREGITATDLVLTVTEMLRKKGVVGKFVEFYGDGLKDLPLADRATIANMAPEYGATCGFFPVDDETLNYLRLTGREDDQVALVEAYSKAQGLWREPNDEPIFTDALQLDMTEVVASLAGPKRPQDRVALQDMASAFGKFMQEDTKANATEKGKFSSEGGQTAVGVERSFKDDTSQAVKLNDRDFSLDPGAVVIAAITSCTNTSNPSVMMAAGLLARKAREKGLTTQPWVKTSLAPGSKVVTDYLAAAGLNEDLDALGFNLVGYGCTTCIGNSGPLADEIEQAINTGDLAVASVLSGNRNFEGRVHPLVKTNWLASPPLVVAYALAGNVQRDLTQEPLGQDSNGEPVYLKDIWPTQAEIATAVEKVNTDMFRKEYGAVFEG 635
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BLAST of mRNA_E-siliculosus-1a_F_contig12051.1316.1 vs. uniprot
Match: A0A0N8KIP0_9GAMM (Aconitate hydratase n=40 Tax=root TaxID=1 RepID=A0A0N8KIP0_9GAMM)

HSP 1 Score: 1047 bits (2708), Expect = 0.000e+0
Identity = 518/572 (90.56%), Postives = 544/572 (95.10%), Query Frame = 1 
Query:    1 LVDWQAEGKSNREIGYRPARVLMQDFTGVPGVVDLASMRAAVEKLGEDPAKINPLTPVDLVIDHSVMVDKFGNAAAFQENVDIEMQRNRERYEFLRWGQQAFDNFSVVPPGTGICHQVNLEYLGKTVWTKDDDGKSFAYPDTLVGTDSHTTMINGLGVLGWGVGGIEAEAAMLGQPVSMLIPEVIGFKLTGKLREGITATDLVLTVTEMLRKKGVVGKFVEFYGDGLKDLPLADRATIANMAPEYGATCGFFPVDAETLNYMRLTGREDNQVALVEAYSKAQGLWREPNDEPIFTDALHLDMTEVEASLAGPKRPQDRVALQDMSAAFSKFMQEDTKANSTEQGKFSSEGGQTAVGVERSFEHDTSQAVKLNDHSFSLDPGAVVIAAITSCTNTSNPSVMMAAGLLARKAREKGLTTQPWVKTSLAPGSKVVTDYLKAAGLNDDLDELGFNLVGYGCTTCIGNSGPLPDEIEQAINDGDLAVASVLSGNRNFEGRVHPLVKTNWLASPPLVVAYALAGNVQRDLTKDPIGEGSNGEPVYLKDIWPSQAEIASAVEKVNTEMFRKEYGAVFEG 1716
            LVDWQ EGKS+REIGYRPARVLMQDFTGVPGVVDLASMRAAVEKLGEDPAKINPL+PVDLVIDHSVMVDKFGNAAAFQENVDIEMQRNRERYEFLRWGQQAFDNF VVPPGTGICHQVNLEYLGK VWTK++DG++FAYPDTLVGTDSHTTMINGLGVLGWGVGGIEAEAAMLGQPVSMLIPEVIGFKLTGKLREGITATDLVLTVTEMLRKKGVVGKFVEFYGDGLKDLPLADRATIANMAPEYGATCGFFPVD ETL YMRLTGR+D Q+ LVEAYSK QGLWREP DEP+FTD LHLDMTEVEASLAGPKRPQDRVAL+DM+AAF KF+QEDT A+   +GK SSEGGQTAVG+ RSF+HDTSQAVKL+DH FSLDPGAVVIAAITSCTNTSNPSVMMAAGLLARKAREKGLTT+PWVKTSLAPGSKVVTDYL+AA LN DLD LGFNLVGYGCTTCIGNSGPLPDEIE+AI DGD+AVASVLSGNRNFEGRVHPLVKTNWLASPPLVVAYALAGNVQ DL+ DP+GE +NG PVYLKDIWPSQAEIA+AVE+VNT MF KEYGAVFEG
Sbjct:   64 LVDWQKEGKSSREIGYRPARVLMQDFTGVPGVVDLASMRAAVEKLGEDPAKINPLSPVDLVIDHSVMVDKFGNAAAFQENVDIEMQRNRERYEFLRWGQQAFDNFRVVPPGTGICHQVNLEYLGKAVWTKEEDGRTFAYPDTLVGTDSHTTMINGLGVLGWGVGGIEAEAAMLGQPVSMLIPEVIGFKLTGKLREGITATDLVLTVTEMLRKKGVVGKFVEFYGDGLKDLPLADRATIANMAPEYGATCGFFPVDDETLTYMRLTGRDDEQIDLVEAYSKTQGLWREPGDEPVFTDMLHLDMTEVEASLAGPKRPQDRVALKDMAAAFDKFLQEDTNADPAAKGKLSSEGGQTAVGIARSFQHDTSQAVKLDDHDFSLDPGAVVIAAITSCTNTSNPSVMMAAGLLARKAREKGLTTKPWVKTSLAPGSKVVTDYLEAADLNYDLDALGFNLVGYGCTTCIGNSGPLPDEIEKAIADGDMAVASVLSGNRNFEGRVHPLVKTNWLASPPLVVAYALAGNVQCDLSNDPLGEDNNGNPVYLKDIWPSQAEIATAVEQVNTAMFHKEYGAVFEG 635
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BLAST of mRNA_E-siliculosus-1a_F_contig12051.1316.1 vs. uniprot
Match: A0A3D0KF49_9GAMM (Aconitate hydratase n=5 Tax=Halomonadaceae TaxID=28256 RepID=A0A3D0KF49_9GAMM)

HSP 1 Score: 1040 bits (2690), Expect = 0.000e+0
Identity = 515/572 (90.03%), Postives = 546/572 (95.45%), Query Frame = 1 
Query:    1 LVDWQAEGKSNREIGYRPARVLMQDFTGVPGVVDLASMRAAVEKLGEDPAKINPLTPVDLVIDHSVMVDKFGNAAAFQENVDIEMQRNRERYEFLRWGQQAFDNFSVVPPGTGICHQVNLEYLGKTVWTKDDDGKSFAYPDTLVGTDSHTTMINGLGVLGWGVGGIEAEAAMLGQPVSMLIPEVIGFKLTGKLREGITATDLVLTVTEMLRKKGVVGKFVEFYGDGLKDLPLADRATIANMAPEYGATCGFFPVDAETLNYMRLTGREDNQVALVEAYSKAQGLWREPNDEPIFTDALHLDMTEVEASLAGPKRPQDRVALQDMSAAFSKFMQEDTKANSTEQGKFSSEGGQTAVGVERSFEHDTSQAVKLNDHSFSLDPGAVVIAAITSCTNTSNPSVMMAAGLLARKAREKGLTTQPWVKTSLAPGSKVVTDYLKAAGLNDDLDELGFNLVGYGCTTCIGNSGPLPDEIEQAINDGDLAVASVLSGNRNFEGRVHPLVKTNWLASPPLVVAYALAGNVQRDLTKDPIGEGSNGEPVYLKDIWPSQAEIASAVEKVNTEMFRKEYGAVFEG 1716
            LVDWQ EGKS+REIGYRPARVLMQDFTGVPGVVDLASMRAAVEKLGEDPA+INPL+PVDLVIDHSVMVDKFGNAAAFQENVDIEMQRNRERYEFLRWGQQAFDNFSVVPPGTGICHQVNLEYLG+ VWTK+ DG++FAYPDTLVGTDSHTTMINGLGVLGWGVGGIEAEAAMLGQPVSMLIPEV+GFKL GKLREGITATDLVLTVTEMLRKKGVVGKFVEFYGDGLKDLPLADRATIANMAPEYGATCGFFPVD ETLNYMRLTGRED+Q+ALVEAYSKAQGLWREP DEPIFTD+L L+M EVEASLAGPKRPQDRVAL+DM+AAF KFMQED  A++T  G+FSSEGGQTAVGVERSF+HDTSQ VKLND  FSLDPGAVVIAAITSCTNTSNPSVMMAAGLLAR A +KGLTT+PWVKTSLAPGSKVVTDYL AA L+DDL+ LGFNLVGYGCTTCIGNSGPLPDEIE+AIN GDLAVASVLSGNRNFEGRVHPLVKTNWLASPPLVVAYALAGNVQ +LT DP+G+ ++G PVYLKDIWPSQA+IA+AVE+VNTEMFRKEYGAVFEG
Sbjct:   64 LVDWQKEGKSSREIGYRPARVLMQDFTGVPGVVDLASMRAAVEKLGEDPARINPLSPVDLVIDHSVMVDKFGNAAAFQENVDIEMQRNRERYEFLRWGQQAFDNFSVVPPGTGICHQVNLEYLGRAVWTKEQDGQTFAYPDTLVGTDSHTTMINGLGVLGWGVGGIEAEAAMLGQPVSMLIPEVVGFKLNGKLREGITATDLVLTVTEMLRKKGVVGKFVEFYGDGLKDLPLADRATIANMAPEYGATCGFFPVDDETLNYMRLTGREDDQIALVEAYSKAQGLWREPGDEPIFTDSLSLNMDEVEASLAGPKRPQDRVALKDMAAAFDKFMQEDASADTTANGEFSSEGGQTAVGVERSFKHDTSQTVKLNDKDFSLDPGAVVIAAITSCTNTSNPSVMMAAGLLARNALQKGLTTKPWVKTSLAPGSKVVTDYLAAANLSDDLNALGFNLVGYGCTTCIGNSGPLPDEIEKAINSGDLAVASVLSGNRNFEGRVHPLVKTNWLASPPLVVAYALAGNVQCNLTTDPLGQDNDGNPVYLKDIWPSQADIATAVEQVNTEMFRKEYGAVFEG 635
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BLAST of mRNA_E-siliculosus-1a_F_contig12051.1316.1 vs. uniprot
Match: A0A3S1DG28_9GAMM (Aconitate hydratase n=1 Tax=Halomonas andesensis TaxID=447567 RepID=A0A3S1DG28_9GAMM)

HSP 1 Score: 1038 bits (2685), Expect = 0.000e+0
Identity = 516/572 (90.21%), Postives = 543/572 (94.93%), Query Frame = 1 
Query:    1 LVDWQAEGKSNREIGYRPARVLMQDFTGVPGVVDLASMRAAVEKLGEDPAKINPLTPVDLVIDHSVMVDKFGNAAAFQENVDIEMQRNRERYEFLRWGQQAFDNFSVVPPGTGICHQVNLEYLGKTVWTKDDDGKSFAYPDTLVGTDSHTTMINGLGVLGWGVGGIEAEAAMLGQPVSMLIPEVIGFKLTGKLREGITATDLVLTVTEMLRKKGVVGKFVEFYGDGLKDLPLADRATIANMAPEYGATCGFFPVDAETLNYMRLTGREDNQVALVEAYSKAQGLWREPNDEPIFTDALHLDMTEVEASLAGPKRPQDRVALQDMSAAFSKFMQEDTKANSTEQGKFSSEGGQTAVGVERSFEHDTSQAVKLNDHSFSLDPGAVVIAAITSCTNTSNPSVMMAAGLLARKAREKGLTTQPWVKTSLAPGSKVVTDYLKAAGLNDDLDELGFNLVGYGCTTCIGNSGPLPDEIEQAINDGDLAVASVLSGNRNFEGRVHPLVKTNWLASPPLVVAYALAGNVQRDLTKDPIGEGSNGEPVYLKDIWPSQAEIASAVEKVNTEMFRKEYGAVFEG 1716
            LVDWQ EGKS+REIGYRPARVLMQDFTGVPGVVDLASMRAAVEKLGEDPA+INPL+PVDLVIDHSVMVDKFGNAAAFQENVDIEMQRN ERYEFLRWGQQAFDNFSVVPPGTGICHQVNLEYLG+TVWTK+ DG++FAYPDTLVGTDSHTTMINGLGVLGWGVGGIEAEAAMLGQPVSMLIPEVIGFKL GKLREGITATDLVLTVTEMLRKKGVVGKFVEFYGDGL DLPLADRATIANMAPEYGATCGFFPVD ETLNYMRLTGRED+Q+ALVEAYSKAQGLWREP DEPIFTD+L LDM EVEASLAGPKRPQDRVAL+DM+AAF KFMQED  A+S  +GK SSEGGQTAVGVERSF+HDTSQ VKLND   SLDPGAVVIAAITSCTNTSNPSVMMAAGLLAR AR+KGLTT+PWVKTSLAPGSKVVTDYL AA L+DDL+ LGFNLVGYGCTTCIGNSGPLPDEIE AIN+GDLAVASVLSGNRNFEGRVHPLVKTNWLASPPLVVAYALAGNVQ +LT DP+G  ++G PVYLKD+WPSQA+IASAVE+VNTEMFRKEYGAVFEG
Sbjct:   64 LVDWQKEGKSSREIGYRPARVLMQDFTGVPGVVDLASMRAAVEKLGEDPARINPLSPVDLVIDHSVMVDKFGNAAAFQENVDIEMQRNGERYEFLRWGQQAFDNFSVVPPGTGICHQVNLEYLGRTVWTKEQDGQTFAYPDTLVGTDSHTTMINGLGVLGWGVGGIEAEAAMLGQPVSMLIPEVIGFKLNGKLREGITATDLVLTVTEMLRKKGVVGKFVEFYGDGLNDLPLADRATIANMAPEYGATCGFFPVDDETLNYMRLTGREDDQIALVEAYSKAQGLWREPGDEPIFTDSLSLDMNEVEASLAGPKRPQDRVALKDMAAAFDKFMQEDASADSAAKGKLSSEGGQTAVGVERSFKHDTSQDVKLNDQDVSLDPGAVVIAAITSCTNTSNPSVMMAAGLLARNARQKGLTTKPWVKTSLAPGSKVVTDYLAAANLSDDLNALGFNLVGYGCTTCIGNSGPLPDEIETAINNGDLAVASVLSGNRNFEGRVHPLVKTNWLASPPLVVAYALAGNVQCNLTTDPLGHDNDGNPVYLKDVWPSQADIASAVEQVNTEMFRKEYGAVFEG 635
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BLAST of mRNA_E-siliculosus-1a_F_contig12051.1316.1 vs. uniprot
Match: A0A3D4KR84_HALSX (Aconitate hydratase n=9 Tax=Halomonas TaxID=2745 RepID=A0A3D4KR84_HALSX)

HSP 1 Score: 1026 bits (2652), Expect = 0.000e+0
Identity = 509/577 (88.21%), Postives = 546/577 (94.63%), Query Frame = 1 
Query:    1 LVDWQAEGKSNREIGYRPARVLMQDFTGVPGVVDLASMRAAVEKLGEDPAKINPLTPVDLVIDHSVMVDKFGNAAAFQENVDIEMQRNRERYEFLRWGQQAFDNFSVVPPGTGICHQVNLEYLGKTVWTKDDDGKSFAYPDTLVGTDSHTTMINGLGVLGWGVGGIEAEAAMLGQPVSMLIPEVIGFKLTGKLREGITATDLVLTVTEMLRKKGVVGKFVEFYGDGLKDLPLADRATIANMAPEYGATCGFFPVDAETLNYMRLTGREDNQVALVEAYSKAQGLWREPNDEPIFTDALHLDMTEVEASLAGPKRPQDRVALQDMSAAFSKFMQEDTKAN-STEQGKFSSEGGQTAVGVERS----FEHDTSQAVKLNDHSFSLDPGAVVIAAITSCTNTSNPSVMMAAGLLARKAREKGLTTQPWVKTSLAPGSKVVTDYLKAAGLNDDLDELGFNLVGYGCTTCIGNSGPLPDEIEQAINDGDLAVASVLSGNRNFEGRVHPLVKTNWLASPPLVVAYALAGNVQRDLTKDPIGEGSNGEPVYLKDIWPSQAEIASAVEKVNTEMFRKEYGAVFEG 1716
            LVDWQ EGKS+REIGYRPARVLMQDFTGVPGVVDLASMRAAVEKLGEDPA+INPL+PVDLVIDHSVMVDKFGNA AF+ENV+IEMQRNRERYEFLRWGQQAF+NFSVVPPGTGICHQVNLEYLG++VWTK++DG +FAYPDTLVGTDSHTTMINGLGVLGWGVGGIEAEAAMLGQPVSMLIPEVIGFKLTGKLREGITATDLVLTVTEMLRKKGVVGKFVEFYGDGLKDLPLADRATIANMAPEYGATCGFFPVD ETLNYMRLTGRED+Q+ALVEAYSK QGLWREP DEP+FTDALHLDMTEVEASLAGPKRPQDRVAL+DM+AAF+K MQED KA  + E+GKF SEGGQTAVG+ERS    F+H +SQ V ++D  FSLDPGAVVIAAITSCTNTSNPSVMMAAGLLARKAREKGLTT+PWVKTSLAPGSKVVTDYL AA LN+DL+ LGFNLVGYGCTTCIGNSGPLP+ IE+A+N GDL VASVLSGNRNFEGRVHPLVKTNWLASPPLVVAYALAGNVQRDLT++P+G+ S+G PVYLKDIWPSQAEIA AVEKVNT+MFRKEYG VF+G
Sbjct:   64 LVDWQKEGKSSREIGYRPARVLMQDFTGVPGVVDLASMRAAVEKLGEDPARINPLSPVDLVIDHSVMVDKFGNATAFEENVEIEMQRNRERYEFLRWGQQAFNNFSVVPPGTGICHQVNLEYLGRSVWTKEEDGITFAYPDTLVGTDSHTTMINGLGVLGWGVGGIEAEAAMLGQPVSMLIPEVIGFKLTGKLREGITATDLVLTVTEMLRKKGVVGKFVEFYGDGLKDLPLADRATIANMAPEYGATCGFFPVDDETLNYMRLTGREDDQIALVEAYSKMQGLWREPGDEPVFTDALHLDMTEVEASLAGPKRPQDRVALKDMAAAFNKVMQEDAKAQPNAEKGKFDSEGGQTAVGIERSLEGDFKHASSQKVTIDDQDFSLDPGAVVIAAITSCTNTSNPSVMMAAGLLARKAREKGLTTKPWVKTSLAPGSKVVTDYLAAANLNEDLNALGFNLVGYGCTTCIGNSGPLPEAIEKAVNQGDLTVASVLSGNRNFEGRVHPLVKTNWLASPPLVVAYALAGNVQRDLTQEPLGQDSDGNPVYLKDIWPSQAEIAEAVEKVNTDMFRKEYGEVFKG 640
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BLAST of mRNA_E-siliculosus-1a_F_contig12051.1316.1 vs. uniprot
Match: A0A7Y3XB01_9GAMM (Aconitate hydratase n=2 Tax=Halomonas TaxID=2745 RepID=A0A7Y3XB01_9GAMM)

HSP 1 Score: 1011 bits (2615), Expect = 0.000e+0
Identity = 505/573 (88.13%), Postives = 533/573 (93.02%), Query Frame = 1 
Query:    1 LVDWQAEGKSNREIGYRPARVLMQDFTGVPGVVDLASMRAAVEKLGEDPAKINPLTPVDLVIDHSVMVDKFGNAAAFQENVDIEMQRNRERYEFLRWGQQAFDNFSVVPPGTGICHQVNLEYLGKTVWTKDDDGKSFAYPDTLVGTDSHTTMINGLGVLGWGVGGIEAEAAMLGQPVSMLIPEVIGFKLTGKLREGITATDLVLTVTEMLRKKGVVGKFVEFYGDGLKDLPLADRATIANMAPEYGATCGFFPVDAETLNYMRLTGREDNQVALVEAYSKAQGLWREPNDEPIFTDALHLDMTEVEASLAGPKRPQDRVALQDMSAAFSKFMQEDTKANSTEQ-GKFSSEGGQTAVGVERSFEHDTSQAVKLNDHSFSLDPGAVVIAAITSCTNTSNPSVMMAAGLLARKAREKGLTTQPWVKTSLAPGSKVVTDYLKAAGLNDDLDELGFNLVGYGCTTCIGNSGPLPDEIEQAINDGDLAVASVLSGNRNFEGRVHPLVKTNWLASPPLVVAYALAGNVQRDLTKDPIGEGSNGEPVYLKDIWPSQAEIASAVEKVNTEMFRKEYGAVFEG 1716
            LVDWQ EGKS+REIGYRPARVLMQDFTGVPGVVDLASMRAAVEKLGEDPA INPL+PVDLVIDHSVMVDKFGN AAFQ+NVDIEMQRNRERYEFLRWGQ+AFDNFSVVPPGTGICHQVNLEYLGKTVWTK+++G + AYPDTLVGTDSHTTMINGLGVLGWGVGGIEAEAAMLGQPVSMLIPEVIGFKLTGKLREGITATDLVLTVTEMLRKKGVVGKFVEFYGDGLKDLPLADRATIANMAPEYGATCGFFPVD ETLNY+RLTGRED QVALVEAYSKAQGLWREP DEPIFTD LHLDMTEVEASLAGPKRPQDRV L++M AAF+K M++D KA   +  GK +SEGGQTAVGV+RS+EH  SQAV      F LDPGAVVIAAITSCTNTSNPSVMMAAGLLARKA EKGL TQPWVKTSLAPGSKVVTDYL+AA L+DDL+ LGFNLVGYGCTTCIGNSGPLP+EIE+A++DGDL VASVLSGNRNFEGRVHPLVKTNWLASPPLVVAYALAGNVQ DLT+DP+G    G PVYLKDIWPSQAEIA+AVEKVNT MFRKEYGAVFEG
Sbjct:   64 LVDWQQEGKSSREIGYRPARVLMQDFTGVPGVVDLASMRAAVEKLGEDPACINPLSPVDLVIDHSVMVDKFGNPAAFQDNVDIEMQRNRERYEFLRWGQKAFDNFSVVPPGTGICHQVNLEYLGKTVWTKEENGATLAYPDTLVGTDSHTTMINGLGVLGWGVGGIEAEAAMLGQPVSMLIPEVIGFKLTGKLREGITATDLVLTVTEMLRKKGVVGKFVEFYGDGLKDLPLADRATIANMAPEYGATCGFFPVDDETLNYLRLTGREDAQVALVEAYSKAQGLWREPGDEPIFTDTLHLDMTEVEASLAGPKRPQDRVELKNMPAAFAKVMEDDGKAEELQTVGKLASEGGQTAVGVDRSYEHSDSQAVSFKGQDFKLDPGAVVIAAITSCTNTSNPSVMMAAGLLARKALEKGLVTQPWVKTSLAPGSKVVTDYLEAANLSDDLNALGFNLVGYGCTTCIGNSGPLPEEIEKAVSDGDLTVASVLSGNRNFEGRVHPLVKTNWLASPPLVVAYALAGNVQCDLTQDPLGTDKQGNPVYLKDIWPSQAEIATAVEKVNTAMFRKEYGAVFEG 636
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BLAST of mRNA_E-siliculosus-1a_F_contig12051.1316.1 vs. uniprot
Match: A0A7Z0LK59_9GAMM (Aconitate hydratase n=1 Tax=Halomonas salicampi TaxID=1449798 RepID=A0A7Z0LK59_9GAMM)

HSP 1 Score: 1009 bits (2608), Expect = 0.000e+0
Identity = 498/574 (86.76%), Postives = 534/574 (93.03%), Query Frame = 1 
Query:    1 LVDWQAEGKSNREIGYRPARVLMQDFTGVPGVVDLASMRAAVEKLGEDPAKINPLTPVDLVIDHSVMVDKFGNAAAFQENVDIEMQRNRERYEFLRWGQQAFDNFSVVPPGTGICHQVNLEYLGKTVWTKDDDGKSFAYPDTLVGTDSHTTMINGLGVLGWGVGGIEAEAAMLGQPVSMLIPEVIGFKLTGKLREGITATDLVLTVTEMLRKKGVVGKFVEFYGDGLKDLPLADRATIANMAPEYGATCGFFPVDAETLNYMRLTGREDNQVALVEAYSKAQGLWREPNDEPIFTDALHLDMTEVEASLAGPKRPQDRVALQDMSAAFSKFMQEDTKANSTEQG--KFSSEGGQTAVGVERSFEHDTSQAVKLNDHSFSLDPGAVVIAAITSCTNTSNPSVMMAAGLLARKAREKGLTTQPWVKTSLAPGSKVVTDYLKAAGLNDDLDELGFNLVGYGCTTCIGNSGPLPDEIEQAINDGDLAVASVLSGNRNFEGRVHPLVKTNWLASPPLVVAYALAGNVQRDLTKDPIGEGSNGEPVYLKDIWPSQAEIASAVEKVNTEMFRKEYGAVFEG 1716
            LVDWQ EGKS+REIGYRPARVLMQDFTGVPGVVDLASMRAAV KLGEDP++INPL+PVDLVIDHSVMVD FGNAAAFQ+NVDIEMQRNRERYEFLRWGQ+AFDNF VVPPGTGICHQVNLEYLG+TVWTK +DGK+FAYPDTLVGTDSHTTMINGLGVLGWGVGGIEAEAAMLGQPVSMLIPEV+GFKLTGKLREGITATDLVLTVTEMLRKKGVVGKFVEFYGDGLKDLPLADRATIANMAPEYGATCGFFPVD ETLNYMRLTGR+D QVALVEAYSK QGLWREP DEP+FTD+LHLDM EVEASLAGPKRPQDRV L+DM  AF++ M++D KA + +    K +SEGGQTAVGVERSF+HD SQ V   D  F L+PGAVVIAAITSCTNTSNPSVMMAAGL+AR AR+KGLTT+PWVKTSLAPGSKVVTDYLKAA LNDDLD LGFNLVGYGCTTCIGNSGPLP+EIE+A++DGDL VASVLSGNRNFEGRVHPLVKTNWLASPPLVVAYALAGNVQ DLT+D +G+ S+G PVYLKD+WPSQAEIA AVE+VNTEMFRKEYG VFEG
Sbjct:   69 LVDWQKEGKSSREIGYRPARVLMQDFTGVPGVVDLASMRAAVAKLGEDPSRINPLSPVDLVIDHSVMVDNFGNAAAFQDNVDIEMQRNRERYEFLRWGQEAFDNFRVVPPGTGICHQVNLEYLGQTVWTKQEDGKTFAYPDTLVGTDSHTTMINGLGVLGWGVGGIEAEAAMLGQPVSMLIPEVVGFKLTGKLREGITATDLVLTVTEMLRKKGVVGKFVEFYGDGLKDLPLADRATIANMAPEYGATCGFFPVDDETLNYMRLTGRDDEQVALVEAYSKTQGLWREPGDEPVFTDSLHLDMNEVEASLAGPKRPQDRVELKDMPTAFAQVMKDDGKALAPQSSPDKLASEGGQTAVGVERSFDHDDSQNVNFKDQDFKLNPGAVVIAAITSCTNTSNPSVMMAAGLVARNARKKGLTTKPWVKTSLAPGSKVVTDYLKAANLNDDLDALGFNLVGYGCTTCIGNSGPLPEEIEKAVSDGDLTVASVLSGNRNFEGRVHPLVKTNWLASPPLVVAYALAGNVQCDLTQDALGQDSDGNPVYLKDVWPSQAEIAEAVEQVNTEMFRKEYGEVFEG 642
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BLAST of mRNA_E-siliculosus-1a_F_contig12051.1316.1 vs. uniprot
Match: A0A6M1S175_HALSX (Aconitate hydratase n=48 Tax=Halomonas TaxID=2745 RepID=A0A6M1S175_HALSX)

HSP 1 Score: 1000 bits (2585), Expect = 0.000e+0
Identity = 501/577 (86.83%), Postives = 534/577 (92.55%), Query Frame = 1 
Query:    1 LVDWQAEGKSNREIGYRPARVLMQDFTGVPGVVDLASMRAAVEKLGEDPAKINPLTPVDLVIDHSVMVDKFGNAAAFQENVDIEMQRNRERYEFLRWGQQAFDNFSVVPPGTGICHQVNLEYLGKTVWTKDDDGKSFAYPDTLVGTDSHTTMINGLGVLGWGVGGIEAEAAMLGQPVSMLIPEVIGFKLTGKLREGITATDLVLTVTEMLRKKGVVGKFVEFYGDGLKDLPLADRATIANMAPEYGATCGFFPVDAETLNYMRLTGREDNQVALVEAYSKAQGLWREPNDEPIFTDALHLDMTEVEASLAGPKRPQDRVALQDMSAAFSKFMQEDTKAN-STEQGKFSSEGGQTAVGVERSF----EHDTSQAVKLNDHSFSLDPGAVVIAAITSCTNTSNPSVMMAAGLLARKAREKGLTTQPWVKTSLAPGSKVVTDYLKAAGLNDDLDELGFNLVGYGCTTCIGNSGPLPDEIEQAINDGDLAVASVLSGNRNFEGRVHPLVKTNWLASPPLVVAYALAGNVQRDLTKDPIGEGSNGEPVYLKDIWPSQAEIASAVEKVNTEMFRKEYGAVFEG 1716
            LVDWQ EG+S+REIGYRPARVLMQDFTGVPGVVDLASMRAAVE LGEDPA+INPL+PVDLVIDHSVMVDKFGN  AFQENVDIEMQRN ERYEFLRWGQ+AFDNFSVVPPGTGICHQVNLEYLG+TVWTK +DGK+FAYPDTLVGTDSHTTMINGLGVLGWGVGGIEAEAAMLGQPVSMLIPEVIGFKLTGKL+EGITATDLVLTVTEMLRKKGVVGKFVEFYGDGLKDLPLADRATIANMAPEYGATCGFFPVD ETLNY+RLTGRED  VALVEAYSKAQGLWREP DEPIFTD L LDM+ VEASLAGPKRPQDRV+L++M  AF+  M+ED K+  STE GK SSEGGQTAVG++RSF    +H  SQAVK+ +  F+LDPGAVVIAAITSCTNTSNPSVMMAAGLLAR AR+KGL T+PWVKTSLAPGSKVVTDYL AA LNDDLD LGFNLVGYGCTTCIGNSGPLPD IE+AI  GDLAVASVLSGNRNFEGRVHPLVKTNWLASPPLVVAYALAGNVQ +L+ DP+GE S+G PVYLKDIWPSQA+IA+AV+KVNTEMFRKEYGAVFEG
Sbjct:   64 LVDWQNEGQSSREIGYRPARVLMQDFTGVPGVVDLASMRAAVESLGEDPARINPLSPVDLVIDHSVMVDKFGNPTAFQENVDIEMQRNGERYEFLRWGQKAFDNFSVVPPGTGICHQVNLEYLGRTVWTKQEDGKTFAYPDTLVGTDSHTTMINGLGVLGWGVGGIEAEAAMLGQPVSMLIPEVIGFKLTGKLQEGITATDLVLTVTEMLRKKGVVGKFVEFYGDGLKDLPLADRATIANMAPEYGATCGFFPVDDETLNYLRLTGREDELVALVEAYSKAQGLWREPGDEPIFTDTLSLDMSSVEASLAGPKRPQDRVSLKNMPKAFASVMEEDGKSYPSTETGKLSSEGGQTAVGIDRSFARSFQHSDSQAVKMGEQDFNLDPGAVVIAAITSCTNTSNPSVMMAAGLLARNARQKGLATKPWVKTSLAPGSKVVTDYLAAAELNDDLDALGFNLVGYGCTTCIGNSGPLPDAIEKAIQQGDLAVASVLSGNRNFEGRVHPLVKTNWLASPPLVVAYALAGNVQCNLSTDPLGEDSDGNPVYLKDIWPSQADIANAVQKVNTEMFRKEYGAVFEG 640
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BLAST of mRNA_E-siliculosus-1a_F_contig12051.1316.1 vs. uniprot
Match: UPI001D0BC1BA (aconitate hydratase AcnA n=1 Tax=Halomonas malpeensis TaxID=1172368 RepID=UPI001D0BC1BA)

HSP 1 Score: 991 bits (2562), Expect = 0.000e+0
Identity = 493/573 (86.04%), Postives = 533/573 (93.02%), Query Frame = 1 
Query:    1 LVDWQAEGKSNREIGYRPARVLMQDFTGVPGVVDLASMRAAVEKLGEDPAKINPLTPVDLVIDHSVMVDKFGNAAAFQENVDIEMQRNRERYEFLRWGQQAFDNFSVVPPGTGICHQVNLEYLGKTVWTKDDDGKSFAYPDTLVGTDSHTTMINGLGVLGWGVGGIEAEAAMLGQPVSMLIPEVIGFKLTGKLREGITATDLVLTVTEMLRKKGVVGKFVEFYGDGLKDLPLADRATIANMAPEYGATCGFFPVDAETLNYMRLTGREDNQVALVEAYSKAQGLWREPNDEPIFTDALHLDMTEVEASLAGPKRPQDRVALQDMSAAFSKFMQEDTKAN-STEQGKFSSEGGQTAVGVERSFEHDTSQAVKLNDHSFSLDPGAVVIAAITSCTNTSNPSVMMAAGLLARKAREKGLTTQPWVKTSLAPGSKVVTDYLKAAGLNDDLDELGFNLVGYGCTTCIGNSGPLPDEIEQAINDGDLAVASVLSGNRNFEGRVHPLVKTNWLASPPLVVAYALAGNVQRDLTKDPIGEGSNGEPVYLKDIWPSQAEIASAVEKVNTEMFRKEYGAVFEG 1716
            LVDWQ EGKS+REIGYRPARVLMQDFTGVPGVVDLASMRAAVEKLGEDPA+INPL+PVDLVIDHSVMVD+FG+A AF ENV+IEMQRNRERYEFLRWGQQAFDNFSVVPPGTGICHQVNLEYLGK+VWTK+++GK+FA+PDTLVGTDSHTTMINGLGVLGWGVGGIEAEAAMLGQPVSMLIPEVIGFKLTGKL+EGITATDLVLTVTEMLRKKGVVGKFVEFYGDGLKDLPLADRATIANMAPEYGATCGFFPVD ETLNYMRLTGR D+Q+ALV+AY + QGLWREP DEP+F+D L LDM+ VEASLAGPKRPQDRV+L+ M  AF+K M++D K+  STE GK SSEGGQTAVG+ERSFEH+ SQ V  +  +F L+PGAVVIAAITSCTNTSNPSVMMAAGLLARKAREKGL T+PWVKTSLAPGSKVVTDYL AA LNDDLD LGFNLVGYGCTTCIGNSGPLP+ IE+A+N GDLAVASVLSGNRNFEGRVHPLVKTNWLASPPLVVAYALAGNVQ +L  + +GE S+G PVYLKDIWPSQAEIA +VEKVNTEMFRKEYGAVFEG
Sbjct:   64 LVDWQKEGKSSREIGYRPARVLMQDFTGVPGVVDLASMRAAVEKLGEDPARINPLSPVDLVIDHSVMVDEFGHATAFDENVEIEMQRNRERYEFLRWGQQAFDNFSVVPPGTGICHQVNLEYLGKSVWTKEENGKTFAFPDTLVGTDSHTTMINGLGVLGWGVGGIEAEAAMLGQPVSMLIPEVIGFKLTGKLQEGITATDLVLTVTEMLRKKGVVGKFVEFYGDGLKDLPLADRATIANMAPEYGATCGFFPVDDETLNYMRLTGRNDDQIALVKAYCQEQGLWREPGDEPVFSDTLGLDMSTVEASLAGPKRPQDRVSLKRMPDAFAKVMEDDGKSQPSTETGKLSSEGGQTAVGIERSFEHNDSQDVAYDGQNFRLNPGAVVIAAITSCTNTSNPSVMMAAGLLARKAREKGLATKPWVKTSLAPGSKVVTDYLAAANLNDDLDALGFNLVGYGCTTCIGNSGPLPEAIEKAVNAGDLAVASVLSGNRNFEGRVHPLVKTNWLASPPLVVAYALAGNVQCNLATEALGEDSSGNPVYLKDIWPSQAEIAESVEKVNTEMFRKEYGAVFEG 636
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BLAST of mRNA_E-siliculosus-1a_F_contig12051.1316.1 vs. uniprot
Match: A0A7X4JZ18_9GAMM (Aconitate hydratase n=2 Tax=Halomonas TaxID=2745 RepID=A0A7X4JZ18_9GAMM)

HSP 1 Score: 990 bits (2560), Expect = 0.000e+0
Identity = 490/573 (85.51%), Postives = 531/573 (92.67%), Query Frame = 1 
Query:    1 LVDWQAEGKSNREIGYRPARVLMQDFTGVPGVVDLASMRAAVEKLGEDPAKINPLTPVDLVIDHSVMVDKFGNAAAFQENVDIEMQRNRERYEFLRWGQQAFDNFSVVPPGTGICHQVNLEYLGKTVWTKDDDGKSFAYPDTLVGTDSHTTMINGLGVLGWGVGGIEAEAAMLGQPVSMLIPEVIGFKLTGKLREGITATDLVLTVTEMLRKKGVVGKFVEFYGDGLKDLPLADRATIANMAPEYGATCGFFPVDAETLNYMRLTGREDNQVALVEAYSKAQGLWREPNDEPIFTDALHLDMTEVEASLAGPKRPQDRVALQDMSAAFSKFMQEDTKANSTEQ-GKFSSEGGQTAVGVERSFEHDTSQAVKLNDHSFSLDPGAVVIAAITSCTNTSNPSVMMAAGLLARKAREKGLTTQPWVKTSLAPGSKVVTDYLKAAGLNDDLDELGFNLVGYGCTTCIGNSGPLPDEIEQAINDGDLAVASVLSGNRNFEGRVHPLVKTNWLASPPLVVAYALAGNVQRDLTKDPIGEGSNGEPVYLKDIWPSQAEIASAVEKVNTEMFRKEYGAVFEG 1716
            LVDWQ EGKS+REIGYRPARVLMQDFTGVPGVVDLASMRAAVEKLGEDPA+INPL+PVDLVIDHSVMVD+FGNA+AFQ+NVDIEM+RNRERYEFLRWGQ+AFDNF VVPPGTGICHQVNLEYLG+TVW+K+++GK+FA+PDTLVGTDSHTTMINGLGVLGWGVGGIEAEAAMLGQPVSMLIPEV+GFKLTGKLREGITATDLVLTVTEMLRKKGVVGKFVEFYGDGLKDLPLADRATIANMAPEYGATCGFFPVD ETL+Y+RLTGR+D+QVALVEAYSK QGLWREP DEPIF+D L LDM EVEASLAGPKRPQDRV L++M AAF+K MQE+ K + ++Q  + SSEGGQTAVGVERSF+H  SQ V      F LDPGAVVIAAITSCTNTSNPSVMMAAGLLAR A ++GLTT+PWVKTSLAPGSKVVTDYLKAA L DDL+ LGFNLVGYGCTTCIGNSGPLP+EIE+A+ DGDL VASVLSGNRNFEGRVHPLVKTNWLASPPLVVAYALAGNVQ DLT+D +G   +G PVYLKDIWPSQAEIA AVE+VNTEMFRKEYG VFEG
Sbjct:   69 LVDWQKEGKSSREIGYRPARVLMQDFTGVPGVVDLASMRAAVEKLGEDPARINPLSPVDLVIDHSVMVDEFGNASAFQDNVDIEMKRNRERYEFLRWGQEAFDNFRVVPPGTGICHQVNLEYLGQTVWSKEENGKTFAFPDTLVGTDSHTTMINGLGVLGWGVGGIEAEAAMLGQPVSMLIPEVVGFKLTGKLREGITATDLVLTVTEMLRKKGVVGKFVEFYGDGLKDLPLADRATIANMAPEYGATCGFFPVDEETLHYLRLTGRDDDQVALVEAYSKTQGLWREPGDEPIFSDTLALDMNEVEASLAGPKRPQDRVELKNMPAAFAKVMQEEDKTSESQQPSRLSSEGGQTAVGVERSFDHADSQDVSFKGQDFKLDPGAVVIAAITSCTNTSNPSVMMAAGLLARNAHKRGLTTKPWVKTSLAPGSKVVTDYLKAADLTDDLNALGFNLVGYGCTTCIGNSGPLPEEIEKAVTDGDLTVASVLSGNRNFEGRVHPLVKTNWLASPPLVVAYALAGNVQCDLTQDALGTDQDGNPVYLKDIWPSQAEIAEAVEQVNTEMFRKEYGEVFEG 641
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig12051.1316.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2A3XCZ1_9GAMM0.000e+093.53Aconitate hydratase n=5 Tax=Halomonas TaxID=2745 R... [more]
A0A0N8KIP0_9GAMM0.000e+090.56Aconitate hydratase n=40 Tax=root TaxID=1 RepID=A0... [more]
A0A3D0KF49_9GAMM0.000e+090.03Aconitate hydratase n=5 Tax=Halomonadaceae TaxID=2... [more]
A0A3S1DG28_9GAMM0.000e+090.21Aconitate hydratase n=1 Tax=Halomonas andesensis T... [more]
A0A3D4KR84_HALSX0.000e+088.21Aconitate hydratase n=9 Tax=Halomonas TaxID=2745 R... [more]
A0A7Y3XB01_9GAMM0.000e+088.13Aconitate hydratase n=2 Tax=Halomonas TaxID=2745 R... [more]
A0A7Z0LK59_9GAMM0.000e+086.76Aconitate hydratase n=1 Tax=Halomonas salicampi Ta... [more]
A0A6M1S175_HALSX0.000e+086.83Aconitate hydratase n=48 Tax=Halomonas TaxID=2745 ... [more]
UPI001D0BC1BA0.000e+086.04aconitate hydratase AcnA n=1 Tax=Halomonas malpeen... [more]
A0A7X4JZ18_9GAMM0.000e+085.51Aconitate hydratase n=2 Tax=Halomonas TaxID=2745 R... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_F_contig12051contigE-siliculosus-1a_F_contig12051:3..1718 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef902022-09-19
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female2021-02-24
Properties
Property NameValue
Start0
Stop0
Cds size1716
Model size1716
Exons1
Hectar predicted targeting categoryother localisation
BRITEbr01601,ko00000,ko00001,ko00002,ko01000
Best eggNOG OGNA|NA|NA
Best tax levelOceanospirillales
BiGG ReactioniAPECO1_1312.APECO1_436,iECOK1_1307.ECOK1_1491,iECS88_1305.ECS88_1416,iJN746.PP_2112,iUMN146_1321.UM146_10390,iUTI89_1310.UTI89_C1547
COG Functional cat.C
EC4.2.1.3
EggNOG OGs1MU9T@1224,1RN5I@1236,1XHDB@135619,COG1048@1,COG1048@2
EggNOG free text desc.Catalyzes the isomerization of citrate to isocitrate via cis-aconitate
GOsGO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0003730,GO:0003824,GO:0003994,GO:0005488,GO:0005506,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0006081,GO:0006082,GO:0006091,GO:0006097,GO:0006099,GO:0006101,GO:0006629,GO:0006631,GO:0006950,GO:0006979,GO:0008150,GO:0008152,GO:0009060,GO:0009061,GO:0009987,GO:0015980,GO:0016829,GO:0016835,GO:0016836,GO:0016999,GO:0017144,GO:0019541,GO:0019679,GO:0019752,GO:0032787,GO:0043167,GO:0043169,GO:0043436,GO:0044237,GO:0044238,GO:0044255,GO:0044262,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0045333,GO:0046459,GO:0046487,GO:0046872,GO:0046914,GO:0047456,GO:0048037,GO:0050896,GO:0051536,GO:0051539,GO:0051540,GO:0055114,GO:0071704,GO:0072350,GO:0097159,GO:1901363
KEGG ModuleM00009,M00010,M00012,M00173,M00740
KEGG Pathwayko00020,ko00630,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko01210,ko01230,map00020,map00630,map00720,map01100,map01110,map01120,map01130,map01200,map01210,map01230
KEGG ReactionR01324,R01325,R01900
KEGG koko:K01681
KEGG rclassRC00497,RC00498,RC00618
Preferred nameacnA
Seed eggNOG ortholog1504981.KO116_4031
Seed ortholog evalue0.0
Seed ortholog score1095.5
Taxonomic scopeBacteria
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927726.6047215-CDS-E-siliculosus-1a_F_contig12051:2..17181622927726.6047215-CDS-E-siliculosus-1a_F_contig12051:2..1718Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig12051 3..1718 +
1696318655.854373-CDS-E-siliculosus-1a_F_contig12051:2..17181696318655.854373-CDS-E-siliculosus-1a_F_contig12051:2..1718Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig12051 3..1718 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_F_contig12051.1316.1prot_E-siliculosus-1a_F_contig12051.1316.1Ectocarpus siliculosus Ec863f_EcPH12_90f femalepolypeptideE-siliculosus-1a_F_contig12051 3..1718 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E-siliculosus-1a_F_contig12051.1316.1

>prot_E-siliculosus-1a_F_contig12051.1316.1 ID=prot_E-siliculosus-1a_F_contig12051.1316.1|Name=mRNA_E-siliculosus-1a_F_contig12051.1316.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=572bp
LVDWQAEGKSNREIGYRPARVLMQDFTGVPGVVDLASMRAAVEKLGEDPA
KINPLTPVDLVIDHSVMVDKFGNAAAFQENVDIEMQRNRERYEFLRWGQQ
AFDNFSVVPPGTGICHQVNLEYLGKTVWTKDDDGKSFAYPDTLVGTDSHT
TMINGLGVLGWGVGGIEAEAAMLGQPVSMLIPEVIGFKLTGKLREGITAT
DLVLTVTEMLRKKGVVGKFVEFYGDGLKDLPLADRATIANMAPEYGATCG
FFPVDAETLNYMRLTGREDNQVALVEAYSKAQGLWREPNDEPIFTDALHL
DMTEVEASLAGPKRPQDRVALQDMSAAFSKFMQEDTKANSTEQGKFSSEG
GQTAVGVERSFEHDTSQAVKLNDHSFSLDPGAVVIAAITSCTNTSNPSVM
MAAGLLARKAREKGLTTQPWVKTSLAPGSKVVTDYLKAAGLNDDLDELGF
NLVGYGCTTCIGNSGPLPDEIEQAINDGDLAVASVLSGNRNFEGRVHPLV
KTNWLASPPLVVAYALAGNVQRDLTKDPIGEGSNGEPVYLKDIWPSQAEI
ASAVEKVNTEMFRKEYGAVFEG
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mRNA from alignment at E-siliculosus-1a_F_contig12051:3..1718+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E-siliculosus-1a_F_contig12051.1316.1 ID=mRNA_E-siliculosus-1a_F_contig12051.1316.1|Name=mRNA_E-siliculosus-1a_F_contig12051.1316.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=1716bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig12051:3..1718+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
CTGGTCGACTGGCAGGCCGAGGGCAAATCCAACCGCGAAATTGGTTACCG
CCCGGCACGGGTTTTAATGCAGGACTTTACCGGTGTGCCTGGCGTGGTTG
ACTTAGCCTCCATGCGCGCTGCCGTGGAAAAATTAGGCGAAGACCCCGCG
AAGATCAATCCGCTCACGCCGGTTGATCTGGTCATTGATCACTCGGTAAT
GGTTGATAAGTTCGGTAACGCTGCTGCCTTTCAAGAAAACGTTGATATCG
AAATGCAGCGAAACCGCGAGCGCTACGAGTTTCTACGCTGGGGACAACAA
GCCTTTGACAACTTCAGCGTCGTACCCCCTGGCACCGGCATTTGCCACCA
GGTAAACCTAGAGTATTTAGGCAAAACGGTATGGACCAAGGATGACGATG
GTAAGTCCTTCGCCTACCCCGATACACTCGTAGGCACTGACTCACATACT
ACGATGATCAATGGTTTAGGCGTGCTTGGTTGGGGCGTTGGTGGTATTGA
AGCGGAAGCGGCCATGCTCGGCCAGCCAGTATCGATGCTGATCCCTGAAG
TGATTGGCTTTAAGTTGACCGGCAAGTTGCGTGAAGGTATTACCGCCACT
GACCTAGTGCTCACCGTCACTGAGATGCTGCGTAAAAAAGGCGTTGTCGG
TAAATTTGTTGAGTTCTACGGCGACGGTTTGAAAGACTTACCACTCGCCG
ATCGCGCGACTATTGCCAATATGGCCCCAGAGTATGGCGCTACATGTGGC
TTCTTCCCCGTCGATGCTGAAACGCTGAACTATATGCGCTTAACCGGCCG
CGAAGATAATCAAGTCGCCCTAGTCGAAGCCTATAGCAAAGCCCAAGGGC
TATGGCGCGAGCCCAACGACGAGCCAATCTTCACCGACGCACTGCACCTG
GACATGACCGAAGTAGAAGCCAGTCTTGCAGGGCCCAAGCGCCCTCAAGA
CCGTGTTGCTCTGCAAGACATGTCGGCGGCCTTTAGCAAATTCATGCAAG
AAGACACAAAAGCGAATTCTACCGAACAGGGCAAGTTCTCTTCTGAGGGC
GGCCAAACCGCGGTGGGGGTGGAACGTAGCTTCGAACATGACACTAGCCA
AGCCGTTAAGTTGAATGACCATAGCTTCAGTCTCGACCCCGGCGCGGTAG
TGATTGCGGCCATTACCTCATGTACTAACACCTCCAACCCCAGCGTGATG
ATGGCGGCAGGATTGCTGGCACGTAAAGCACGCGAAAAAGGCCTAACAAC
TCAGCCCTGGGTGAAGACTTCACTGGCACCAGGCTCTAAAGTAGTGACCG
ATTATTTGAAAGCGGCTGGCCTAAATGATGACTTGGATGAACTCGGTTTC
AACCTAGTCGGCTACGGCTGTACCACCTGTATCGGCAACTCTGGCCCGCT
GCCGGATGAGATTGAGCAGGCAATTAACGATGGCGATCTTGCGGTAGCCT
CAGTGCTTTCCGGCAACCGCAACTTTGAAGGCCGCGTTCATCCGCTGGTG
AAAACCAACTGGCTCGCATCCCCTCCCCTGGTTGTGGCTTACGCCTTAGC
AGGTAACGTTCAACGTGACCTTACTAAAGATCCCATTGGTGAAGGCAGCA
ACGGTGAGCCCGTCTACCTTAAAGACATTTGGCCCAGCCAGGCAGAAATC
GCCAGCGCCGTCGAGAAGGTCAACACCGAGATGTTCCGTAAAGAGTATGG
CGCGGTGTTTGAAGGG
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Coding sequence (CDS) from alignment at E-siliculosus-1a_F_contig12051:3..1718+

>mRNA_E-siliculosus-1a_F_contig12051.1316.1 ID=mRNA_E-siliculosus-1a_F_contig12051.1316.1|Name=mRNA_E-siliculosus-1a_F_contig12051.1316.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=3432bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig12051:3..1718+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
CTGGTCGACTGGCAGGCCGAGGGCAAATCCAACCGCGAAATTGGTTACCG
CCCGGCACGGGTTTTAATGCAGGACTTTACCGGTGTGCCTGGCGTGGTTG
ACTTAGCCTCCATGCGCGCTGCCGTGGAAAAATTAGGCGAAGACCCCGCG
AAGATCAATCCGCTCACGCCGGTTGATCTGGTCATTGATCACTCGGTAAT
GGTTGATAAGTTCGGTAACGCTGCTGCCTTTCAAGAAAACGTTGATATCG
AAATGCAGCGAAACCGCGAGCGCTACGAGTTTCTACGCTGGGGACAACAA
GCCTTTGACAACTTCAGCGTCGTACCCCCTGGCACCGGCATTTGCCACCA
GGTAAACCTAGAGTATTTAGGCAAAACGGTATGGACCAAGGATGACGATG
GTAAGTCCTTCGCCTACCCCGATACACTCGTAGGCACTGACTCACATACT
ACGATGATCAATGGTTTAGGCGTGCTTGGTTGGGGCGTTGGTGGTATTGA
AGCGGAAGCGGCCATGCTCGGCCAGCCAGTATCGATGCTGATCCCTGAAG
TGATTGGCTTTAAGTTGACCGGCAAGTTGCGTGAAGGTATTACCGCCACT
GACCTAGTGCTCACCGTCACTGAGATGCTGCGTAAAAAAGGCGTTGTCGG
TAAATTTGTTGAGTTCTACGGCGACGGTTTGAAAGACTTACCACTCGCCG
ATCGCGCGACTATTGCCAATATGGCCCCAGAGTATGGCGCTACATGTGGC
TTCTTCCCCGTCGATGCTGAAACGCTGAACTATATGCGCTTAACCGGCCG
CGAAGATAATCAAGTCGCCCTAGTCGAAGCCTATAGCAAAGCCCAAGGGC
TATGGCGCGAGCCCAACGACGAGCCAATCTTCACCGACGCACTGCACCTG
GACATGACCGAAGTAGAAGCCAGTCTTGCAGGGCCCAAGCGCCCTCAAGA
CCGTGTTGCTCTGCAAGACATGTCGGCGGCCTTTAGCAAATTCATGCAAG
AAGACACAAAAGCGAATTCTACCGAACAGGGCAAGTTCTCTTCTGAGGGC
GGCCAAACCGCGGTGGGGGTGGAACGTAGCTTCGAACATGACACTAGCCA
AGCCGTTAAGTTGAATGACCATAGCTTCAGTCTCGACCCCGGCGCGGTAG
TGATTGCGGCCATTACCTCATGTACTAACACCTCCAACCCCAGCGTGATG
ATGGCGGCAGGATTGCTGGCACGTAAAGCACGCGAAAAAGGCCTAACAAC
TCAGCCCTGGGTGAAGACTTCACTGGCACCAGGCTCTAAAGTAGTGACCG
ATTATTTGAAAGCGGCTGGCCTAAATGATGACTTGGATGAACTCGGTTTC
AACCTAGTCGGCTACGGCTGTACCACCTGTATCGGCAACTCTGGCCCGCT
GCCGGATGAGATTGAGCAGGCAATTAACGATGGCGATCTTGCGGTAGCCT
CAGTGCTTTCCGGCAACCGCAACTTTGAAGGCCGCGTTCATCCGCTGGTG
AAAACCAACTGGCTCGCATCCCCTCCCCTGGTTGTGGCTTACGCCTTAGC
AGGTAACGTTCAACGTGACCTTACTAAAGATCCCATTGGTGAAGGCAGCA
ACGGTGAGCCCGTCTACCTTAAAGACATTTGGCCCAGCCAGGCAGAAATC
GCCAGCGCCGTCGAGAAGGTCAACACCGAGATGTTCCGTAAAGAGTATGG
CGCGGTGTTTGAAGGGCTGGTCGACTGGCAGGCCGAGGGCAAATCCAACC
GCGAAATTGGTTACCGCCCGGCACGGGTTTTAATGCAGGACTTTACCGGT
GTGCCTGGCGTGGTTGACTTAGCCTCCATGCGCGCTGCCGTGGAAAAATT
AGGCGAAGACCCCGCGAAGATCAATCCGCTCACGCCGGTTGATCTGGTCA
TTGATCACTCGGTAATGGTTGATAAGTTCGGTAACGCTGCTGCCTTTCAA
GAAAACGTTGATATCGAAATGCAGCGAAACCGCGAGCGCTACGAGTTTCT
ACGCTGGGGACAACAAGCCTTTGACAACTTCAGCGTCGTACCCCCTGGCA
CCGGCATTTGCCACCAGGTAAACCTAGAGTATTTAGGCAAAACGGTATGG
ACCAAGGATGACGATGGTAAGTCCTTCGCCTACCCCGATACACTCGTAGG
CACTGACTCACATACTACGATGATCAATGGTTTAGGCGTGCTTGGTTGGG
GCGTTGGTGGTATTGAAGCGGAAGCGGCCATGCTCGGCCAGCCAGTATCG
ATGCTGATCCCTGAAGTGATTGGCTTTAAGTTGACCGGCAAGTTGCGTGA
AGGTATTACCGCCACTGACCTAGTGCTCACCGTCACTGAGATGCTGCGTA
AAAAAGGCGTTGTCGGTAAATTTGTTGAGTTCTACGGCGACGGTTTGAAA
GACTTACCACTCGCCGATCGCGCGACTATTGCCAATATGGCCCCAGAGTA
TGGCGCTACATGTGGCTTCTTCCCCGTCGATGCTGAAACGCTGAACTATA
TGCGCTTAACCGGCCGCGAAGATAATCAAGTCGCCCTAGTCGAAGCCTAT
AGCAAAGCCCAAGGGCTATGGCGCGAGCCCAACGACGAGCCAATCTTCAC
CGACGCACTGCACCTGGACATGACCGAAGTAGAAGCCAGTCTTGCAGGGC
CCAAGCGCCCTCAAGACCGTGTTGCTCTGCAAGACATGTCGGCGGCCTTT
AGCAAATTCATGCAAGAAGACACAAAAGCGAATTCTACCGAACAGGGCAA
GTTCTCTTCTGAGGGCGGCCAAACCGCGGTGGGGGTGGAACGTAGCTTCG
AACATGACACTAGCCAAGCCGTTAAGTTGAATGACCATAGCTTCAGTCTC
GACCCCGGCGCGGTAGTGATTGCGGCCATTACCTCATGTACTAACACCTC
CAACCCCAGCGTGATGATGGCGGCAGGATTGCTGGCACGTAAAGCACGCG
AAAAAGGCCTAACAACTCAGCCCTGGGTGAAGACTTCACTGGCACCAGGC
TCTAAAGTAGTGACCGATTATTTGAAAGCGGCTGGCCTAAATGATGACTT
GGATGAACTCGGTTTCAACCTAGTCGGCTACGGCTGTACCACCTGTATCG
GCAACTCTGGCCCGCTGCCGGATGAGATTGAGCAGGCAATTAACGATGGC
GATCTTGCGGTAGCCTCAGTGCTTTCCGGCAACCGCAACTTTGAAGGCCG
CGTTCATCCGCTGGTGAAAACCAACTGGCTCGCATCCCCTCCCCTGGTTG
TGGCTTACGCCTTAGCAGGTAACGTTCAACGTGACCTTACTAAAGATCCC
ATTGGTGAAGGCAGCAACGGTGAGCCCGTCTACCTTAAAGACATTTGGCC
CAGCCAGGCAGAAATCGCCAGCGCCGTCGAGAAGGTCAACACCGAGATGT
TCCGTAAAGAGTATGGCGCGGTGTTTGAAGGG
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