mRNA_E-siliculosus-1a_F_contig1204.1311.1 (mRNA) Ectocarpus siliculosus Ec863f_EcPH12_90f female
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Overview
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig1204.1311.1 vs. uniprot
Match: D8LC69_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LC69_ECTSI) HSP 1 Score: 281 bits (718), Expect = 3.370e-89 Identity = 144/156 (92.31%), Postives = 145/156 (92.95%), Query Frame = 1
Query: 1 VAGTNQGRIYRVRMETLASIVVSENHRGSVTCVSYARGVSDRFATASVDGTVRVWDTSDYGVLTTAVVRDAGEPLCLVLTQ-----------IRSHDADTGHLLWSIDNAHAGGVTSLVVSHNERFLVTGGMEGELRVWELRSRDLVSHLKQHGQR 435
VAGTNQGRIYRVR+ETLASIVVSENHRGSVTCVSYARGVSDRFATASVDGTVRVWDTSDYGVLTTAVVRDAGEPLCLVLTQ IRSHDADTGHLLWSIDNAHAGGVTSLVVSHNERFLVTGGMEGELRVWELRSRDLVSHLKQHGQR
Sbjct: 257 VAGTNQGRIYRVRVETLASIVVSENHRGSVTCVSYARGVSDRFATASVDGTVRVWDTSDYGVLTTAVVRDAGEPLCLVLTQDMMLTGWRDGQIRSHDADTGHLLWSIDNAHAGGVTSLVVSHNERFLVTGGMEGELRVWELRSRDLVSHLKQHGQR 412
BLAST of mRNA_E-siliculosus-1a_F_contig1204.1311.1 vs. uniprot
Match: A0A836CKB4_9STRA (Quinon protein alcohol dehydrogenase-like superfamily n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CKB4_9STRA) HSP 1 Score: 181 bits (458), Expect = 6.740e-51 Identity = 88/156 (56.41%), Postives = 116/156 (74.36%), Query Frame = 1
Query: 1 VAGTNQGRIYRVRMETLASIVVSENHRGSVTCVSYARGVSDRFATASVDGTVRVWDTSDYGVLTTAVVRDAGEPLCLVLTQ-----------IRSHDADTGHLLWSIDNAHAGGVTSLVVSHNERFLVTGGMEGELRVWELRSRDLVSHLKQHGQR 435
+AGT++G +YRVR+ TL ++ ++E+ G+V ++YA GVSD+FATA+ DG +R+WD SDY + AVV+DA EPLCL LT+ +R+HDADTG LW +DN H GVT+L +S N+RF +TGG GELRVWELRSR+LVSHLKQHGQR
Sbjct: 232 LAGTDEGFVYRVRVATLDALQLAESPTGAVRALAYAPGVSDKFATAAADGALRLWDASDYTAVMAAVVKDAQEPLCLALTEDMVVSGWRDGRLRAHDADTGKALWLMDNTHVEGVTALALSRNQRFALTGGQGGELRVWELRSRELVSHLKQHGQR 387
BLAST of mRNA_E-siliculosus-1a_F_contig1204.1311.1 vs. uniprot
Match: A0A7S2W1F3_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2W1F3_9STRA) HSP 1 Score: 171 bits (434), Expect = 9.820e-47 Identity = 83/156 (53.21%), Postives = 113/156 (72.44%), Query Frame = 1
Query: 1 VAGTNQGRIYRVRMETLASIVVSENHRGSVTCVSYARGVSDRFATASVDGTVRVWDTSDYGVLTTAVVRDAGEPLCLVLT-----------QIRSHDADTGHLLWSIDNAHAGGVTSLVVSHNERFLVTGGMEGELRVWELRSRDLVSHLKQHGQR 435
+AGT G +YR+ E L +++V+ENH V CVS++ S+RFATAS D T+RVWD ++Y VLTT +RDAG P CL T ++R+HD+++G LW IDNAH GGVT+L +S+NER+++TGG EGE+R+WELRSR+LVSHLK+H R
Sbjct: 351 LAGTKFGFVYRMSTERLEAVLVNENHYRPVKCVSFSPETSERFATASEDCTIRVWDATEYTVLTTVQLRDAGAPACLAYTLDFLISGWEDGRVRAHDSESGDFLWMIDNAHRGGVTALELSNNERYIMTGGAEGEVRIWELRSRELVSHLKEHTLR 506
BLAST of mRNA_E-siliculosus-1a_F_contig1204.1311.1 vs. uniprot
Match: A0A662XYQ9_9STRA (F-box domain-containing protein (Fragment) n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662XYQ9_9STRA) HSP 1 Score: 167 bits (424), Expect = 3.920e-45 Identity = 87/159 (54.72%), Postives = 109/159 (68.55%), Query Frame = 1
Query: 1 VAGTNQGRIYRVRM------ETLASIVVSENHRGSVTCVSYARGVSDRFATASVDGTVRVWDTSDYGVLTTAVVRDAGEPLCLVLT-----------QIRSHDADTGHLLWSIDNAHAGGVTSLVVSHNERFLVTGGMEGELRVWELRSRDLVSHLKQH 426
VAGT G IY VR+ +L + ++SENH +V V+YA GVSDRFAT S D T+RVWD SDY V+T VV +AG P CL + IRSH +D G L WSIDNAH GGVT+LV+SHN+RF+V+ G+ GE+RVW++R RDLVSHLK+H
Sbjct: 456 VAGTQAGSIYAVRLAFGASQRSLQANLLSENHSSAVVQVAYAAGVSDRFATISRDCTIRVWDASDYSVVTRCVVNNAGAPTCLQFSLDVLLSGWTDGSIRSHGSDWGELAWSIDNAHTGGVTALVLSHNQRFIVSAGVGGEVRVWDIRKRDLVSHLKEH 614
BLAST of mRNA_E-siliculosus-1a_F_contig1204.1311.1 vs. uniprot
Match: A0A662WMD0_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662WMD0_9STRA) HSP 1 Score: 163 bits (412), Expect = 3.880e-43 Identity = 85/159 (53.46%), Postives = 107/159 (67.30%), Query Frame = 1
Query: 1 VAGTNQGRIYRVRM------ETLASIVVSENHRGSVTCVSYARGVSDRFATASVDGTVRVWDTSDYGVLTTAVVRDAGEPLCLVLT-----------QIRSHDADTGHLLWSIDNAHAGGVTSLVVSHNERFLVTGGMEGELRVWELRSRDLVSHLKQH 426
VAGT G IY VR+ +L + ++SENH +V V+YA GVSDRFAT S D T+RVWD SDY V+ VV +AG P CL + IRSH +D G WSIDNAH GGVT+LV+SHN+RF+V+ G+ GE+RVW++R RDLVSHLK+H
Sbjct: 633 VAGTQAGSIYAVRLAFGASQRSLQAKLLSENHSSAVVQVAYAAGVSDRFATISRDCTIRVWDASDYSVVARCVVSNAGAPTCLQFSLDVLLSGWTDGSIRSHGSDWGEQAWSIDNAHTGGVTALVLSHNQRFIVSAGVGGEVRVWDIRKRDLVSHLKEH 791
BLAST of mRNA_E-siliculosus-1a_F_contig1204.1311.1 vs. uniprot
Match: K3WRT1_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WRT1_GLOUD) HSP 1 Score: 161 bits (408), Expect = 3.930e-43 Identity = 85/157 (54.14%), Postives = 107/157 (68.15%), Query Frame = 1
Query: 1 VAGTNQGRIY----RVRMETLASIVVSENHRGSVTCVSYARGVSDRFATASVDGTVRVWDTSDYGVLTTAVVRDAGEPLCL------VLT-----QIRSHDADTGHLLWSIDNAHAGGVTSLVVSHNERFLVTGGMEGELRVWELRSRDLVSHLKQH 426
V GT G I+ RV L + ++ ENH +V V+YA GVSDRFAT S D T+RVWD SDY V T V +AG P CL +LT IR H ADTGHL+WSIDNAH GGVT++V+SHN+RF+V+ G+ GE+RVW++R RD+VSHLK+H
Sbjct: 328 VVGTQAGSIFVVSLRVTQRNLHASLLFENHSSAVVQVAYAAGVSDRFATVSRDCTIRVWDASDYAVTTKCSVTNAGLPTCLQYSLDVLLTGWTDGAIRCHSADTGHLVWSIDNAHTGGVTAVVLSHNQRFIVSAGVGGEVRVWDIRRRDMVSHLKEH 484
BLAST of mRNA_E-siliculosus-1a_F_contig1204.1311.1 vs. uniprot
Match: A0A7S3ZRQ5_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S3ZRQ5_9STRA) HSP 1 Score: 159 bits (403), Expect = 1.520e-42 Identity = 82/152 (53.95%), Postives = 105/152 (69.08%), Query Frame = 1
Query: 1 VAGTNQGRIYRVRMETLASIVVSENHRGSVTCVSYARGVSDRFATASVDGTVRVWDTSDYGVLTTAVVRDAGEPLCLVLT-----------QIRSHDADTGHLLWSIDNAHAGGVTSLVVSHNERFLVTGGMEGELRVWELRSRDLVSHLKQ 423
VA G IYR+R + +++V ENH V SYAR SDRFATAS D T+RVWD +DY T +VRDAGEP C+V T +IR+HDA+ G LW ID+AH GGVT+L ++ N+RF++TGG EG++RVWELRSR+LVSHLK+
Sbjct: 301 VAAIRNGAIYRLRGDLSRALLVCENHAHPVRACSYARESSDRFATASTDKTLRVWDANDYKASATVLVRDAGEPTCIVYTLDFLISGWTDGRIRAHDAEKGGPLWLIDHAHRGGVTALQLASNQRFVMTGGGEGDVRVWELRSRELVSHLKE 452
BLAST of mRNA_E-siliculosus-1a_F_contig1204.1311.1 vs. uniprot
Match: A0A2D4BGQ7_PYTIN (Uncharacterized protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BGQ7_PYTIN) HSP 1 Score: 159 bits (402), Expect = 3.030e-42 Identity = 81/157 (51.59%), Postives = 108/157 (68.79%), Query Frame = 1
Query: 1 VAGTNQGRIYRVRM----ETLASIVVSENHRGSVTCVSYARGVSDRFATASVDGTVRVWDTSDYGVLTTAVVRDAGEPLCLVLTQ-----------IRSHDADTGHLLWSIDNAHAGGVTSLVVSHNERFLVTGGMEGELRVWELRSRDLVSHLKQH 426
V GT+ G ++ +++ +L S ++S NH +V V+YA GVSDRFAT S D T+RVWD SDY +TT VV AG P L + IRSH +DTG L+WSIDNAH GGVT++V+SHNERF+V+ G+ GE+RVW++R RD+VSHLK+H
Sbjct: 338 VVGTHSGSLFLIKLTLSQRSLPSRLLSANHAAAVVQVAYAAGVSDRFATVSXDCTLRVWDASDYSAVTTCVVSXAGLPTSLQFSLDVLLSGWTDGCIRSHSSDTGALVWSIDNAHTGGVTAVVLSHNERFIVSAGVGGEVRVWDIRKRDMVSHLKEH 494
BLAST of mRNA_E-siliculosus-1a_F_contig1204.1311.1 vs. uniprot
Match: G5AFK6_PHYSP (Uncharacterized protein n=3 Tax=Phytophthora TaxID=4783 RepID=G5AFK6_PHYSP) HSP 1 Score: 158 bits (400), Expect = 5.960e-42 Identity = 84/159 (52.83%), Postives = 105/159 (66.04%), Query Frame = 1
Query: 1 VAGTNQGRIYRVRM------ETLASIVVSENHRGSVTCVSYARGVSDRFATASVDGTVRVWDTSDYGVLTTAVVRDAGEPLCLVLTQ-----------IRSHDADTGHLLWSIDNAHAGGVTSLVVSHNERFLVTGGMEGELRVWELRSRDLVSHLKQH 426
VAGT G I+ VR+ +L + ++SENH V ++YA VSDRFAT S D T+RVWD SDY V T VV DAG P L + IRSH +D+G WSIDNAH GGVTSLV+SHN+RF+V+ G+ GE+RVW++R RDLVSHLK+H
Sbjct: 338 VAGTQAGGIFSVRLAFGTSQRSLQARLLSENHSNGVVQITYASEVSDRFATISRDCTIRVWDASDYSVATRCVVMDAGAPTSLQYSLDILLSGWTDGCIRSHSSDSGEAAWSIDNAHTGGVTSLVLSHNQRFIVSAGVGGEVRVWDIRKRDLVSHLKEH 496
BLAST of mRNA_E-siliculosus-1a_F_contig1204.1311.1 vs. uniprot
Match: A0A485K4D9_9STRA (Aste57867_117 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485K4D9_9STRA) HSP 1 Score: 157 bits (398), Expect = 8.140e-42 Identity = 82/157 (52.23%), Postives = 109/157 (69.43%), Query Frame = 1
Query: 1 VAGTNQGRIYRVRM----ETLASIVVSENHRGSVTCVSYARGVSDRFATASVDGTVRVWDTSDYGVLTTAVVRDAGEPLCL------VLTQ-----IRSHDADTGHLLWSIDNAHAGGVTSLVVSHNERFLVTGGMEGELRVWELRSRDLVSHLKQH 426
+AGT G IY V + +L++ ++ ENH V V++A SDRFAT + D T+R+WD SDY VL A V++AG P CL VLT +R H +DTGH LWSIDNAH GGVTSLV+S+N+RF+V+GGM G++RVW++R RD+VSHLK+H
Sbjct: 304 MAGTQSGFIYHVTLVQHSPSLSAKLICENHSDGVLAVAFAAEFSDRFATIARDCTIRIWDGSDYAVLVRAAVQNAGLPTCLAFSLDIVLTGWQDGCLRCHSSDTGHPLWSIDNAHTGGVTSLVLSNNQRFIVSGGMGGDVRVWDIRKRDMVSHLKEH 460 The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig1204.1311.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-siliculosus-1a_F_contig1204.1311.1 >prot_E-siliculosus-1a_F_contig1204.1311.1 ID=prot_E-siliculosus-1a_F_contig1204.1311.1|Name=mRNA_E-siliculosus-1a_F_contig1204.1311.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=188bp VAGTNQGRIYRVRMETLASIVVSENHRGSVTCVSYARGVSDRFATASVDGback to top mRNA from alignment at E-siliculosus-1a_F_contig1204:29604..31232+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-siliculosus-1a_F_contig1204.1311.1 ID=mRNA_E-siliculosus-1a_F_contig1204.1311.1|Name=mRNA_E-siliculosus-1a_F_contig1204.1311.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=1629bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1204:29604..31232+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top Coding sequence (CDS) from alignment at E-siliculosus-1a_F_contig1204:29604..31232+ >mRNA_E-siliculosus-1a_F_contig1204.1311.1 ID=mRNA_E-siliculosus-1a_F_contig1204.1311.1|Name=mRNA_E-siliculosus-1a_F_contig1204.1311.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=1128bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1204:29604..31232+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top |