mRNA_E-siliculosus-1a_F_contig1201.1291.1 (mRNA) Ectocarpus siliculosus Ec863f_EcPH12_90f female
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Overview
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig1201.1291.1 vs. uniprot
Match: D7FRN9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRN9_ECTSI) HSP 1 Score: 560 bits (1443), Expect = 6.850e-192 Identity = 315/340 (92.65%), Postives = 319/340 (93.82%), Query Frame = 1
Query: 7 PTDRPGVRCGISFWPQGGSEASPSTRDRCLGAQSHVAVEKHQARDMGEILRRVQVICLSTPEEVAAVSAVGPAAAVPPPASEPAELVTMRVVILLGGVAVGIGMFAIFWAWCYAEHRLWQLESAAPPPAGDGIDQPLLAAHEEQEECCSCPMDALEAQQQRGDETARAASLVAPTDSTSSVPSVDSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXVTAAVQPIRPLLRDFTIAELNTFDGGESPLSRKPHPIFISLRGTVYDASNGRGVYGPSGELAAFAGHDVSRWVARGLVASKEDGKSDLDDLSLTGLNRIERMTLAGWEERFKACGYPVVGRVVLQ 1026
PTDRPGVRCGISFWPQGG EAS ST DRCLGAQSHVAVEKHQARDMGEILRRVQV +STPEEVAAVSAVGPAAAVPP ASEPAELVTMRVVILLGGVAVGIGMFAIFWAWCYAEHRLWQLESAA PPAGDGIDQPLLAAHEEQEECCSCPMDALEAQQQR DE ARAAS+ APTDSTSSVPSVDS+X XXXXXXXXXXXXXXXXXX VTAAVQPIRPLLRDFTIAELNTFDGGESPLSRKPHPIFISLRGTVYDASNGRG+YGPSGELAAF GHDVSR VARGLVASKEDGKSDLDDLSLTGLNRIERMTLAGWEERFKACGYPVVGRVVLQ
Sbjct: 325 PTDRPGVRCGISFWPQGGPEASLSTLDRCLGAQSHVAVEKHQARDMGEILRRVQVYRVSTPEEVAAVSAVGPAAAVPP-ASEPAELVTMRVVILLGGVAVGIGMFAIFWAWCYAEHRLWQLESAAAPPAGDGIDQPLLAAHEEQEECCSCPMDALEAQQQRSDEAARAASVGAPTDSTSSVPSVDSTXSLAPXXXXXXXXXXXXXXXXXX-----VTAAVQPIRPLLRDFTIAELNTFDGGESPLSRKPHPIFISLRGTVYDASNGRGIYGPSGELAAFPGHDVSRGVARGLVASKEDGKSDLDDLSLTGLNRIERMTLAGWEERFKACGYPVVGRVVLQ 658
BLAST of mRNA_E-siliculosus-1a_F_contig1201.1291.1 vs. uniprot
Match: A0A6H5JR28_9PHAE (Cytochrome b5 heme-binding domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JR28_9PHAE) HSP 1 Score: 452 bits (1163), Expect = 5.300e-155 Identity = 253/295 (85.76%), Postives = 261/295 (88.47%), Query Frame = 1
Query: 142 MGEILRRVQVICLSTPEEVAAVSAVGPAAAVPPPASEPAELVTMRVVILLGGVAVGIGMFAIFWAWCYAEHRLWQLESAAPPPAGDGIDQPLLAAHEEQEECCSCPMDALEAQQQRGDETARAASLVAPTDSTSSVPSVDSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXVTAAVQPIRPLLRDFTIAELNTFDGGESPLSRKPHPIFISLRGTVYDASNGRGVYGPSGELAAFAGHDVSRWVARGLVASKEDGKSDLDDLSLTGLNRIERMTLAGWEERFKACGYPVVGRVVLQ 1026
MG+I RRVQV LSTPE+VAAVSAVGPAAAVPP ASEPAELVTMRVVILLGGVAVGIGMFAIFWAWCYAEHRLW L SAA PP G+GIDQPLLAAHEE++ECCSCPMD LEAQQQR D ARAASL PTDSTSSVPSVDS+ XXXXXXXXXXX TAA QPIRPLLRDFTIAELNTFDGGESPLSRKPHPIFISL GTVYDASNGRG+YGPSGELAAFAGHDVSRWVARGLVASK+DGKSDLDDLSLTGLNRIERMTLAGWEERFKACGYPVVGRVVLQ
Sbjct: 1 MGDISRRVQVYRLSTPEKVAAVSAVGPAAAVPP-ASEPAELVTMRVVILLGGVAVGIGMFAIFWAWCYAEHRLWLLGSAAAPPEGNGIDQPLLAAHEEEQECCSCPMDELEAQQQRSDVAARAASLGVPTDSTSSVPSVDSTSSLXXXXXXXXXXXSSNIEGENEEF----TAAEQPIRPLLRDFTIAELNTFDGGESPLSRKPHPIFISLGGTVYDASNGRGIYGPSGELAAFAGHDVSRWVARGLVASKDDGKSDLDDLSLTGLNRIERMTLAGWEERFKACGYPVVGRVVLQ 290
BLAST of mRNA_E-siliculosus-1a_F_contig1201.1291.1 vs. uniprot
Match: A0A6H5JQJ8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQJ8_9PHAE) HSP 1 Score: 124 bits (310), Expect = 2.080e-26 Identity = 64/119 (53.78%), Postives = 79/119 (66.39%), Query Frame = 1
Query: 688 RDFTIAELNTFDGG-ESPLSR-------KPHPIFISLRGTVYDASNGRGVYGPSGELAAFAGHDVSRWVARGLVASKEDGKSDLDDLSLTGLNRIERMTLAGWEERFKACGYPVVGRVV 1020
R+FT+ +LN FDGG +P R K PI+I+L+G VYDAS GR +YGP GE + FAGHD+SR VA G S + LDDLSL L R E+MTL GWE+ F+A GYP +GRVV
Sbjct: 333 RNFTVRQLNAFDGGCSAPRMRGGEARAGKQRPIYIALKGEVYDASAGRHLYGPGGEYSEFAGHDISRRVAHGASHSDRSSNTLLDDLSLENLGRFEQMTLRGWEDTFRARGYPSLGRVV 451
BLAST of mRNA_E-siliculosus-1a_F_contig1201.1291.1 vs. uniprot
Match: A0A7S1ZS28_TRICV (Hypothetical protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S1ZS28_TRICV) HSP 1 Score: 88.6 bits (218), Expect = 3.570e-16 Identity = 48/116 (41.38%), Postives = 71/116 (61.21%), Query Frame = 1
Query: 685 LRDFTIAELNTFDGGESPLSRKP--HPIFISLRGTVYDASNGRGVYGPSGELAAFAGHDVSRWVARGLVASKEDGKSDLDDLSLTGLNRIERMTLAGWEERFKA--CGYPVVGRVV 1020
L +FT +L FDGGE + +K P+++S++G VYDAS GR +YGP G +AG + +ARG + +SDLD++S L+ E+ L GW ER K+ C YPV+GR++
Sbjct: 16 LNNFTSVQLLHFDGGEDSVGKKKGEKPVYLSVKGVVYDASKGRHLYGPGGPFEVYAGRECGAALARGSL-----DQSDLDNISCDDLSMNEQTELEGWVERLKSSLC-YPVLGRLI 125
BLAST of mRNA_E-siliculosus-1a_F_contig1201.1291.1 vs. uniprot
Match: A0A1D1YCN3_9ARAE (Putative steroid-binding protein 3 (Fragment) n=1 Tax=Anthurium amnicola TaxID=1678845 RepID=A0A1D1YCN3_9ARAE) HSP 1 Score: 82.4 bits (202), Expect = 3.380e-15 Identity = 48/110 (43.64%), Postives = 66/110 (60.00%), Query Frame = 1
Query: 691 DFTIAELNTFDGGESPLSRKPHPIFISLRGTVYDASNGRGVYGPSGELAAFAGHDVSRWVARGLVASKEDGKSDLDDLSLTGLNRIERMTLAGWEERFKACGYPVVGRVV 1020
+ T AEL +DG + + PI++++RGTVYD + G+G YGP G FAG D SR +A+ + S+ED DL GL E LA WE++F+A YPVVGR+V
Sbjct: 31 EVTEAELKAYDGSD-----EGKPIYVAVRGTVYDVTAGKGFYGPGGSYCVFAGRDASRALAK-MSKSEEDVCGDL-----AGLTDKELGVLADWEKKFQA-KYPVVGRLV 128
BLAST of mRNA_E-siliculosus-1a_F_contig1201.1291.1 vs. uniprot
Match: A0A7I8LDM4_SPIIN (Hypothetical protein n=2 Tax=Spirodela intermedia TaxID=51605 RepID=A0A7I8LDM4_SPIIN) HSP 1 Score: 81.3 bits (199), Expect = 3.920e-15 Identity = 45/110 (40.91%), Postives = 66/110 (60.00%), Query Frame = 1
Query: 691 DFTIAELNTFDGGESPLSRKPHPIFISLRGTVYDASNGRGVYGPSGELAAFAGHDVSRWVARGLVASKEDGKSDLDDLSLTGLNRIERMTLAGWEERFKACGYPVVGRVV 1020
+ T AEL +DG E + PI+++++GTVYD ++G+G YGP G FAG D SR + + + S+E+ +LD GL E L WE++F+A YPVVGR+V
Sbjct: 2 ELTAAELRAYDGSE-----EGKPIYVAVKGTVYDVTSGKGFYGPGGSYCMFAGRDASRALGK-MSKSEEEVSGNLD-----GLTEKELGVLDDWEKKFQA-KYPVVGRLV 99
BLAST of mRNA_E-siliculosus-1a_F_contig1201.1291.1 vs. uniprot
Match: A0A8J5FVZ1_ZINOF (Cytochrome b5 heme-binding domain-containing protein n=2 Tax=Zingiber officinale TaxID=94328 RepID=A0A8J5FVZ1_ZINOF) HSP 1 Score: 80.1 bits (196), Expect = 1.030e-14 Identity = 45/109 (41.28%), Postives = 67/109 (61.47%), Query Frame = 1
Query: 691 DFTIAELNTFDGGESPLSRKPHPIFISLRGTVYDASNGRGVYGPSGELAAFAGHDVSRWVARGLVASKEDGKSDLDDLSLTGLNRIERMTLAGWEERFKACGYPVVGRV 1017
+ T+ +L FDG + PI++++RGT+YD S+G+G YGP G A FAG + SR +A+ SKE+G D+ +L GL+ E L WE++F+ YPVVGR+
Sbjct: 2 ELTLQQLRGFDGSDDS-----KPIYVAIRGTIYDVSSGKGFYGPGGSYAVFAGRETSRALAK---MSKEEG--DICG-NLEGLSEKELGVLVDWEKKFQV-KYPVVGRL 98
BLAST of mRNA_E-siliculosus-1a_F_contig1201.1291.1 vs. uniprot
Match: A0A4S8IKQ5_MUSBA (Cytochrome b5 heme-binding domain-containing protein n=3 Tax=Musaceae TaxID=4637 RepID=A0A4S8IKQ5_MUSBA) HSP 1 Score: 79.3 bits (194), Expect = 1.920e-14 Identity = 44/109 (40.37%), Postives = 65/109 (59.63%), Query Frame = 1
Query: 691 DFTIAELNTFDGGESPLSRKPHPIFISLRGTVYDASNGRGVYGPSGELAAFAGHDVSRWVARGLVASKEDGKSDLDDLSLTGLNRIERMTLAGWEERFKACGYPVVGRV 1017
+ T +L FDG ++ PI++++RG +YD S+G+G YGP G A FAG + SR + + + S++D DLD GL+ E LA WE +F+A YPVVGR+
Sbjct: 2 ELTAQQLRGFDGSDAS-----KPIYVAIRGAIYDVSSGKGFYGPGGPYAVFAGREASRALGK-MSKSEDDVCGDLD-----GLSDKELGVLADWENKFQA-KYPVVGRL 98
BLAST of mRNA_E-siliculosus-1a_F_contig1201.1291.1 vs. uniprot
Match: A0A4Y8D1X8_9HELO (Cytochrome b5 heme-binding domain-containing protein n=13 Tax=Sclerotiniaceae TaxID=28983 RepID=A0A4Y8D1X8_9HELO) HSP 1 Score: 81.6 bits (200), Expect = 2.200e-14 Identity = 53/126 (42.06%), Postives = 73/126 (57.94%), Query Frame = 1
Query: 652 VTAAVQPIRPLLRDFTIAELNTFDGGESPLSRKPHPIFISLRGTVYDASNGRGVYGPSGELAAFAGHDVSRWVARGLVASK---EDGKSDLDDLSLTGLNRIERMTLAGWEERFKACGYPVVGRVV 1020
+ +A PI + R FT EL F G + P+++S+RG V+D SNGR YGP G FAG D SR +A+G ++ ED +++LDDL+ L+ E L GWEERF+ Y VVGR+V
Sbjct: 51 IPSAPAPI--VFRTFTPPELAPFSGLNNT------PVYLSVRGRVFDVSNGRNFYGPGGPYENFAGRDASRGLAKGSFDAEMLTEDLQAELDDLN--DLDAEELEALRGWEERFEE-KYLVVGRLV 165
BLAST of mRNA_E-siliculosus-1a_F_contig1201.1291.1 vs. uniprot
Match: A0A0K9QDA6_SPIOL (Cytochrome b5 heme-binding domain-containing protein n=2 Tax=Spinacia oleracea TaxID=3562 RepID=A0A0K9QDA6_SPIOL) HSP 1 Score: 79.0 bits (193), Expect = 2.550e-14 Identity = 45/110 (40.91%), Postives = 68/110 (61.82%), Query Frame = 1
Query: 691 DFTIAELNTFDGGESPLSRKPHPIFISLRGTVYDASNGRGVYGPSGELAAFAGHDVSRWVARGLVASKEDGKSDLDDLSLTGLNRIERMTLAGWEERFKACGYPVVGRVV 1020
+FT+ +L +DG +S PI+++++G V+D S G YGP G A FAG D SR +A+ + +++D S++D GL+ E LA WE++F+A YPVVGRVV
Sbjct: 2 EFTLQQLKQYDGTDSS-----KPIYVAIKGRVFDVSTGNTFYGPGGAYALFAGKDASRALAK-MSKNEDDVVSNID-----GLSDKEIEVLADWEKKFEA-KYPVVGRVV 99 The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig1201.1291.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-siliculosus-1a_F_contig1201.1291.1 >prot_E-siliculosus-1a_F_contig1201.1291.1 ID=prot_E-siliculosus-1a_F_contig1201.1291.1|Name=mRNA_E-siliculosus-1a_F_contig1201.1291.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=296bp MGEILRRVQVICLSTPEEVAAVSAVGPAAAVPPPASEPAELVTMRVVILLback to top mRNA from alignment at E-siliculosus-1a_F_contig1201:18680..20883+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-siliculosus-1a_F_contig1201.1291.1 ID=mRNA_E-siliculosus-1a_F_contig1201.1291.1|Name=mRNA_E-siliculosus-1a_F_contig1201.1291.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=2204bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1201:18680..20883+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top Coding sequence (CDS) from alignment at E-siliculosus-1a_F_contig1201:18680..20883+ >mRNA_E-siliculosus-1a_F_contig1201.1291.1 ID=mRNA_E-siliculosus-1a_F_contig1201.1291.1|Name=mRNA_E-siliculosus-1a_F_contig1201.1291.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=1776bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1201:18680..20883+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top |