mRNA_E-siliculosus-1a_F_contig1201.1288.1 (mRNA) Ectocarpus siliculosus Ec863f_EcPH12_90f female
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Overview
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig1201.1288.1 vs. uniprot
Match: D7FRP1_ECTSI (PAP2_C domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FRP1_ECTSI) HSP 1 Score: 474 bits (1221), Expect = 1.000e-166 Identity = 232/233 (99.57%), Postives = 233/233 (100.00%), Query Frame = 1
Query: 16 VTVNFATYVHTPAEPLFDIGFLVIPEQTLDSPWRPVSDTLTALLPGIALLRSLFMDRKQRVTLVTSWFRLVSIVYMLRCLTIGLTSLPGPAPHCRDKALYNPPVSWHEIATRMGVMVGDFSSCGDLLFSGHAAFTTLTMLIFVKSWRGHATYRVWKALGVVYLLTMCTLAIAGRKHYTVDITLGILVASLTFFRFENGWRASLNGGAGSGNTAAAVKAAYDPRTEKKNAPWIV 714
VTVNFATYVHTPAEPLFDIGFLVIPEQTLDSPWRPVSDTLTALLPGIALLRSLFMDRKQRVTLVTSWFRLVSIVYMLRCLTIGLTSLPGPAPHCRDKALYNPPVSWHEIATRMGVMVGDFSSCGDLLFSGHAAFTTLTMLIFVKSWRGHATYRVWKALGVVYLLTMCTLAIAGRKHYTVDITLGILVASLTFFRFENGWRASLNGGAGSGNTAAAVKAAYDPRTEKKNAPW+V
Sbjct: 167 VTVNFATYVHTPAEPLFDIGFLVIPEQTLDSPWRPVSDTLTALLPGIALLRSLFMDRKQRVTLVTSWFRLVSIVYMLRCLTIGLTSLPGPAPHCRDKALYNPPVSWHEIATRMGVMVGDFSSCGDLLFSGHAAFTTLTMLIFVKSWRGHATYRVWKALGVVYLLTMCTLAIAGRKHYTVDITLGILVASLTFFRFENGWRASLNGGAGSGNTAAAVKAAYDPRTEKKNAPWVV 399
BLAST of mRNA_E-siliculosus-1a_F_contig1201.1288.1 vs. uniprot
Match: A0A6H5J947_9PHAE (PAP2_C domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J947_9PHAE) HSP 1 Score: 251 bits (642), Expect = 1.640e-74 Identity = 113/197 (57.36%), Postives = 148/197 (75.13%), Query Frame = 1
Query: 25 NFATYVHTPAEPLFDIGFLVIPEQTLDSPWRPVSDTLTALLPGIALLRSLFMDRKQRVTLVTSWFRLVSIVYMLRCLTIGLTSLPGPAPHCRDKALYNPPVSWHEIATRMGVMVGDFSSCGDLLFSGHAAFTTLTMLIFVKSWRG--HATYRVWKALGVVYLLTMCTLAIAGRKHYTVDITLGILVASLTFFRFENG 609
NF+T VH P PLFD+GF ++P Q +DSPWRP+SD LT LPG+A LR+LF DR+ R + WFRL+S+ Y++RCL + LTSLPGPAPHC + Y+PP WH++ATR+G ++GDF +CGDLLFSGH A+TT++ML+ KS+R Y KA G +YLLTM T IAGRKHYTVD+ L +++A LTFFRF++G
Sbjct: 339 NFSTMVHQPRLPLFDVGFYLVPAQGVDSPWRPLSDILTLALPGLAFLRTLFFDRRTRCRFIADWFRLMSVTYLMRCLCVTLTSLPGPAPHCEALSEYDPPRGWHDVATRLGPLMGDFRTCGDLLFSGHTAWTTVSMLLLTKSFRRAPRLVYAFVKAAGFLYLLTMATCTIAGRKHYTVDVALAVVIAGLTFFRFQDG 535
BLAST of mRNA_E-siliculosus-1a_F_contig1201.1288.1 vs. uniprot
Match: D8LG44_ECTSI (PAP2_C domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LG44_ECTSI) HSP 1 Score: 214 bits (546), Expect = 4.640e-67 Identity = 96/172 (55.81%), Postives = 128/172 (74.42%), Query Frame = 1
Query: 94 QTLDSPWRPVSDTLTALLPGIALLRSLFMDRKQRVTLVTSWFRLVSIVYMLRCLTIGLTSLPGPAPHCRDKALYNPPVSWHEIATRMGVMVGDFSSCGDLLFSGHAAFTTLTMLIFVKSWRG--HATYRVWKALGVVYLLTMCTLAIAGRKHYTVDITLGILVASLTFFRFE 603
Q +DSPWRP+SD LT LPG+A R+LF DR+ R + WFRL+S+ Y++RCL + LTSLPGPAPHC + Y+ P WH++ATR+G ++GDF +CGDLLFSGH A+TT++ML+ KS+R Y + K+ G +YLLTM T IAGRKHYTVD+ L +++A LTFFRF+
Sbjct: 30 QGVDSPWRPLSDILTLALPGLAFFRTLFFDRRTRCRFIADWFRLMSVTYLMRCLCVTLTSLPGPAPHCEALSGYDRPRGWHDVATRLGPLMGDFRTCGDLLFSGHTAWTTVSMLLLTKSFRRAPRLVYALVKSTGFLYLLTMATCTIAGRKHYTVDVALAVVIAGLTFFRFQ 201
BLAST of mRNA_E-siliculosus-1a_F_contig1201.1288.1 vs. uniprot
Match: K3X811_GLOUD (PAP2_C domain-containing protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3X811_GLOUD) HSP 1 Score: 219 bits (557), Expect = 1.310e-65 Identity = 99/200 (49.50%), Postives = 149/200 (74.50%), Query Frame = 1
Query: 25 NFATYVHTPAE-PLFDIGFLVIPEQTLDSPWRPVSDTLTALLPGIALLRSLFMDRKQRVTLVTSWFRLVSIVYMLRCLTIGLTSLPGPAPHCRD-KALYNPPVSWHEIATRMGVMVGDFSSCGDLLFSGHAAFTTLTMLIFVKSWRGHATY--RVWKALGVVYLLTMCTLAIAGRKHYTVDITLGILVASLTFFRFENGW 612
N A Y+H P++ PL D+GF+++P Q +DSPWRPVSD LTA++P +A++++ FM R R +++++FR+ ++ Y LR LT+ LTSLPGPAPHCR LY PP +W +I TR+G M G+F+SCGDL+FSGH A+T +L+++++ H ++ LG V+LLT+ TL ++GRKHY+VD+ LGI++++L FF FE+GW
Sbjct: 180 NIAFYLHAPSDTPLRDLGFMLVPAQAVDSPWRPVSDVLTAVMPVVAMVQTYFMTRANRCRVISTFFRVATVSYALRMLTVSLTSLPGPAPHCRPGSGLYFPPQTWIDIVTRVGPMYGNFNSCGDLIFSGHMAYTNSALLLYLRTMDQHFVRFSKLRWTLGAVFLLTLATLCVSGRKHYSVDVMLGIMISTLVFFHFEHGW 379
BLAST of mRNA_E-siliculosus-1a_F_contig1201.1288.1 vs. uniprot
Match: A0A5D6XG27_9STRA (PAP2_C domain-containing protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XG27_9STRA) HSP 1 Score: 215 bits (547), Expect = 2.290e-64 Identity = 108/202 (53.47%), Postives = 145/202 (71.78%), Query Frame = 1
Query: 22 VNFATYVHTPAE-PLFDIGFLVIPEQTLDSPWRPVSDTLTALLPGIALLRSLFMDRKQRVTLVTSWFRLVSIVYMLRCLTIGLTSLPGPAPHCR-DKALYNPPVSWHEIATRMGVMVGDFSSCGDLLFSGHAAFTTLTMLIFVKSWRGHA---TYRVWKALGVVYLLTMCTLAIAGRKHYTVDITLGILVASLTFFRFENGW 612
VN A Y+H P+ PL D+GFL IPEQ +DS WRP+SD LTA +P + LL+SL M R+ RVT+++++FR ++ Y LR LTI LTSLPGPAPHCR A Y PP +W +I TR+G M G+++SCGDL+FSGH A+T +L++++ HA + W ALG YLL + L IAGRKHYTVD+ LG+L+++L FF FE+ W
Sbjct: 129 VNVAFYLHVPSSTPLPDLGFLFIPEQAVDSKWRPLSDVLTAGVPVVFLLQSLAMTRENRVTVISTFFRCATVCYFLRGLTIALTSLPGPAPHCRVGSATYFPPQNWIDIVTRVGPMYGNYNSCGDLIFSGHMAYTNSAVLLYLRVLDRHAPRFSALRW-ALGAAYLLLLAALCIAGRKHYTVDVVLGLLISALVFFHFEHSW 329
BLAST of mRNA_E-siliculosus-1a_F_contig1201.1288.1 vs. uniprot
Match: A0A662Y930_9STRA (PAP2_C domain-containing protein n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662Y930_9STRA) HSP 1 Score: 214 bits (544), Expect = 6.100e-64 Identity = 101/203 (49.75%), Postives = 146/203 (71.92%), Query Frame = 1
Query: 22 VNFATYVHTPAE-PLFDIGFLVIPEQTLDSPWRPVSDTLTALLPGIALLRSLFMDRKQRVTLVTSWFRLVSIVYMLRCLTIGLTSLPGPAPHCRDKAL-YNPPVSWHEIATRMGVMVGDFSSCGDLLFSGHAAFTTLTMLIFVKS----WRGHATYRVWKALGVVYLLTMCTLAIAGRKHYTVDITLGILVASLTFFRFENGW 612
VN A Y+H P PL D+GF++IPEQ +DS WRPVSD LTA +P I +L++LFM R R +++S+FRL ++ Y LR LT+ +TSLPGPAPHCR + Y PP +W +I TR+G + G+++SCGDL+FSGH A+T +L+++++ + GH ++ A G+ YL+ + L IAGRKHYTVD+ LG+++A+L FF FE+ W
Sbjct: 153 VNIAFYLHVPTTTPLKDLGFMLIPEQAIDSKWRPVSDLLTAGVPVIFMLQTLFMTRANRCRIISSFFRLATVCYFLRMLTVSVTSLPGPAPHCRAGSPDYYPPTTWIDIVTRVGPIYGNYNSCGDLIFSGHMAYTNSAVLLYLRTLDRNFPGHTASKIRWACGMSYLVVLSVLCIAGRKHYTVDVVLGLMIATLVFFHFEHSW 355
BLAST of mRNA_E-siliculosus-1a_F_contig1201.1288.1 vs. uniprot
Match: A0A5D6Y3E4_9STRA (PAP2_C domain-containing protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6Y3E4_9STRA) HSP 1 Score: 213 bits (541), Expect = 1.890e-63 Identity = 103/200 (51.50%), Postives = 143/200 (71.50%), Query Frame = 1
Query: 25 NFATYVHTPAE-PLFDIGFLVIPEQTLDSPWRPVSDTLTALLPGIALLRSLFMDRKQRVTLVTSWFRLVSIVYMLRCLTIGLTSLPGPAPHCRD-KALYNPPVSWHEIATRMGVMVGDFSSCGDLLFSGHAAFTTLTMLIFVKSW-RGHATY-RVWKALGVVYLLTMCTLAIAGRKHYTVDITLGILVASLTFFRFENGW 612
N A Y+H PA PL D+GF+++PEQ LDS WRP+SD LTA++P + LL++LFM R R ++ ++FR+ S+ Y LR LT+ LTSLPGPAPHCR ALY PP +W +I TR+G M G F+SCGDL+FSGH A+T +L+++++ R A + R+ G +LL + L +AGRKHYTVD+ LG++V+SL +F FE W
Sbjct: 143 NIAFYLHAPAAAPLRDLGFMLVPEQALDSKWRPLSDVLTAVVPVLGLLQTLFMTRANRCRVIATFFRVASVSYALRLLTVSLTSLPGPAPHCRPGSALYAPPQTWIDIVTRVGPMYGQFNSCGDLIFSGHMAYTNSALLLYLRTMDRYFARFSRLRWLAGTAFLLALALLCVAGRKHYTVDVVLGVVVSSLVYFHFEYSW 342
BLAST of mRNA_E-siliculosus-1a_F_contig1201.1288.1 vs. uniprot
Match: A0A484EEP4_BRELC (PAP2_C domain-containing protein n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484EEP4_BRELC) HSP 1 Score: 211 bits (538), Expect = 4.020e-63 Identity = 102/204 (50.00%), Postives = 147/204 (72.06%), Query Frame = 1
Query: 22 VNFATYVHTPAE-PLFDIGFLVIPEQTLDSPWRPVSDTLTALLPGIALLRSLFMDRKQRVTLVTSWFRLVSIVYMLRCLTIGLTSLPGPAPHCRDKAL-YNPPVSWHEIATRMGVMVGDFSSCGDLLFSGHAAFTTLTMLIFVKS----WRGHATYRVWKALGVVYLLTMCTLAIAGRKHYTVDITLGILVASLTFFRFENGWR 615
VN + ++H PA PL D+GF++IPEQTL S WRPVSD LTA LP I LL+++ M R R +V+S+FR+ +I Y LR LT+ +TSLPGPAPHCR L Y PP +W +I TR+G + G+++SCGDL+FSGH A+T +L+++++ + G + ++ A GV YL+ + L IAGRKHYTVD+ LG++++++ FF FE+ WR
Sbjct: 147 VNISFFLHVPAATPLKDLGFMLIPEQTLHSKWRPVSDILTAGLPVIFLLQTIVMSRPSRCRIVSSFFRIATICYFLRMLTVSVTSLPGPAPHCRAGNLDYFPPATWIDIVTRVGPIYGNYNSCGDLIFSGHMAYTNSAVLLYLRTLDRNFSGSMSSKIRWACGVAYLIILAVLCIAGRKHYTVDVVLGVIISTMVFFLFEHSWR 350
BLAST of mRNA_E-siliculosus-1a_F_contig1201.1288.1 vs. uniprot
Match: A0A0P1APX3_PLAHL (Transmembrane protein n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1APX3_PLAHL) HSP 1 Score: 209 bits (532), Expect = 9.010e-63 Identity = 103/203 (50.74%), Postives = 145/203 (71.43%), Query Frame = 1
Query: 22 VNFATYVHTPAE-PLFDIGFLVIPEQTLDSPWRPVSDTLTALLPGIALLRSLFMDRKQRVTLVTSWFRLVSIVYMLRCLTIGLTSLPGPAPHCRDKAL-YNPPVSWHEIATRMGVMVGDFSSCGDLLFSGHAAFTTLTMLIFVKS----WRGHATYRVWKALGVVYLLTMCTLAIAGRKHYTVDITLGILVASLTFFRFENGW 612
VN + Y+H PA PL D+GF++IPEQ L S WRPVSD LTA +P I LL++ M R R +V+S+FR+V+I Y LR LT+ +TSLPGPAPHCR + Y PP SW +IATR+G + G+++SCGDL+FSGH A+T +L+++++ + G ++ A G+ YL+ + L IAGRKHYTVD+ LG++V++L FF FE+ W
Sbjct: 99 VNISFYLHVPATTPLKDLGFMIIPEQKLHSKWRPVSDILTAGMPVIFLLQTAVMTRPNRCRVVSSFFRIVTICYFLRMLTVSVTSLPGPAPHCRVGSHDYFPPTSWIDIATRVGPIYGNYNSCGDLIFSGHMAYTVSAVLLYLRTLDRNFPGRMASKIRWACGLTYLIILAVLCIAGRKHYTVDVVLGLIVSTLVFFHFEHSW 301
BLAST of mRNA_E-siliculosus-1a_F_contig1201.1288.1 vs. uniprot
Match: A0A3M6VWW8_9STRA (PAP2_C domain-containing protein n=1 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VWW8_9STRA) HSP 1 Score: 206 bits (525), Expect = 3.600e-61 Identity = 100/203 (49.26%), Postives = 144/203 (70.94%), Query Frame = 1
Query: 22 VNFATYVHTPA-EPLFDIGFLVIPEQTLDSPWRPVSDTLTALLPGIALLRSLFMDRKQRVTLVTSWFRLVSIVYMLRCLTIGLTSLPGPAPHCRDKAL-YNPPVSWHEIATRMGVMVGDFSSCGDLLFSGHAAFTTLTMLIFVKS----WRGHATYRVWKALGVVYLLTMCTLAIAGRKHYTVDITLGILVASLTFFRFENGW 612
VN A Y+H P PL D+GF++IPEQ L S WRPVSD LTA +P + LL++ M R R +V+S+FR+ +I Y LR LT+ +TSLPGPAPHCR + Y+PP SW +I TR+G + G+++SCGDL+FSGH A+T L +L+++++ + H ++ A G+ YL+ + L IAGRKHYTVD+ LG+L++++ FF FE+ W
Sbjct: 152 VNIAFYLHEPTITPLKDLGFMLIPEQGLHSKWRPVSDILTAGVPVMFLLQTFAMTRPNRCRIVSSFFRVATICYFLRMLTVSVTSLPGPAPHCRAGSPDYDPPTSWIDIVTRVGPIYGNYNSCGDLIFSGHMAYTNLAVLLYLRTLDRNFTNHTISKMRWACGMAYLVILAVLCIAGRKHYTVDVVLGLLISTMVFFHFEHSW 354 The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig1201.1288.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-siliculosus-1a_F_contig1201.1288.1 >prot_E-siliculosus-1a_F_contig1201.1288.1 ID=prot_E-siliculosus-1a_F_contig1201.1288.1|Name=mRNA_E-siliculosus-1a_F_contig1201.1288.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=238bp MTTAVTVNFATYVHTPAEPLFDIGFLVIPEQTLDSPWRPVSDTLTALLPGback to top mRNA from alignment at E-siliculosus-1a_F_contig1201:126..1778+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-siliculosus-1a_F_contig1201.1288.1 ID=mRNA_E-siliculosus-1a_F_contig1201.1288.1|Name=mRNA_E-siliculosus-1a_F_contig1201.1288.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=1653bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1201:126..1778+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top Coding sequence (CDS) from alignment at E-siliculosus-1a_F_contig1201:126..1778+ >mRNA_E-siliculosus-1a_F_contig1201.1288.1 ID=mRNA_E-siliculosus-1a_F_contig1201.1288.1|Name=mRNA_E-siliculosus-1a_F_contig1201.1288.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=1428bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1201:126..1778+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top |