mRNA_E-siliculosus-1a_F_contig1200.1284.1 (mRNA) Ectocarpus siliculosus Ec863f_EcPH12_90f female
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Overview
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig1200.1284.1 vs. uniprot
Match: D8LL58_ECTSI (NB-ARC and TPR repeat-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LL58_ECTSI) HSP 1 Score: 1119 bits (2895), Expect = 0.000e+0 Identity = 565/641 (88.14%), Postives = 596/641 (92.98%), Query Frame = 1
Query: 184 RKPWPAFVHAGLQTRDEWSNCPEAVGEALEWMASATVGLLDMASVGPLTPVCKAFTALIEAAEGAIEVAESVEELVSWCSFLVGVFIEHGKQEGNLRPVAKPMKDFVATTIELAKRAKTLGARGKCTALLCHRRDGKQVQDFDVKLRRIWDDIQGVTLLAFYADFRATLPPKAGDMARVPKNAPQLPPAFVERRDLVKAVVQDLVAMDRATNTAHVLRGMPGGGKTVAANAVVRCEDVRRSFKDGIFWVRVGQVGTGNPMALLEGLAQNLAPAPTHQPRTVPHEFVDVEHTLSHLQGVRKEGNLRCLVVLDDVWDAQIVPLFLRIGFHSLVTTRDLAVIPRDLRGVCTEVEMLTNAEALELLKNASRATMAIPTNEGLKVADDCGFLPLPLAIVGAMGSSRADPDSADTWRGIHALLQQEPQLVQDPVGGVLAVSFRELNGAARTRFRKLGVLAKGVRAPVDMVAHLWELDPDDTTLLLDDLVDKSLVKVEEHAYYLHDLVLDFAKDELRKLREKEKVRLVTSRQAQYLGRMSVVKDYAKAGEVVGGFYALMALWRSVEDLSGDDQLETRTYVATMKPSEEGESSEDSAYLNWAVGRLFELQVKFAEAEALYYRCQVVNEKVLGPEHLTLATILHNRAGLL 2106
RKPWPAFV AGLQ R EW+NCPEAVGEALEWMASATVGLLDMASVGPLTPVCKAFT+LIEAAEGAIEVA+++EELVSWCSFLVGVFIEHGKQE NLRP+AKPMKDFVATTIELAKRAK +GARGKCTALLCHRRDGKQVQDFDVKLR IWDDIQGVTLLAFY+DFRATLPPK MARVPKNA QLPPAFVERRDL KAVV+DLVA DRATN AHVLRGMPGGGKT+AA AVVRCEDVRRSFKDGIFWV+VGQVGTGNPMALL+GLA++LA AP+HQP TVPHEFVDVEH +SHL+GVRKE NLRCLVVLDDVWDAQIVPLFL GFHSLVTTRDLAVIPRDL+GVCTEVEMLTNAEALELLKNASRAT AIPTNEGLKVA DCGFLPLPLAIVGAMGSSRADPDSA+TWRGIHALLQQEP+LVQDPVG VLAVSF L GAARTRFRKLGVLAKG RAPVDMVAHLWELD DD+TLLLDDLVDKSLVKVEEHAYYLHDLVLDFAKDELRKL KE+VRLVT RQAQYLGRMSVVKDYAKAGEV+GGFYALMALWRSVEDLSGD+QLE TY AT+KPSEE E+SED AYL WAVGRLFELQ KFAEAE LY RCQ +NE+ LGPEH ++AT LH RAGL+
Sbjct: 55 RKPWPAFVQAGLQARYEWNNCPEAVGEALEWMASATVGLLDMASVGPLTPVCKAFTSLIEAAEGAIEVAKNLEELVSWCSFLVGVFIEHGKQEDNLRPIAKPMKDFVATTIELAKRAKAMGARGKCTALLCHRRDGKQVQDFDVKLRHIWDDIQGVTLLAFYSDFRATLPPKTAYMARVPKNAKQLPPAFVERRDLFKAVVKDLVATDRATNAAHVLRGMPGGGKTIAAKAVVRCEDVRRSFKDGIFWVQVGQVGTGNPMALLQGLARDLAHAPSHQPHTVPHEFVDVEHAVSHLEGVRKERNLRCLVVLDDVWDAQIVPLFLCGGFHSLVTTRDLAVIPRDLQGVCTEVEMLTNAEALELLKNASRATAAIPTNEGLKVAKDCGFLPLPLAIVGAMGSSRADPDSAETWRGIHALLQQEPELVQDPVGSVLAVSFCGLKGAARTRFRKLGVLAKGARAPVDMVAHLWELDHDDSTLLLDDLVDKSLVKVEEHAYYLHDLVLDFAKDELRKL--KERVRLVTCRQAQYLGRMSVVKDYAKAGEVMGGFYALMALWRSVEDLSGDNQLEASTYGATVKPSEESEASEDVAYLTWAVGRLFELQGKFAEAEELYDRCQAINEEALGPEHPSVATTLHGRAGLM 693
BLAST of mRNA_E-siliculosus-1a_F_contig1200.1284.1 vs. uniprot
Match: A0A6H5L982_9PHAE (NB-ARC domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L982_9PHAE) HSP 1 Score: 664 bits (1713), Expect = 1.420e-225 Identity = 327/470 (69.57%), Postives = 388/470 (82.55%), Query Frame = 1
Query: 184 RKPWPAFVHAGLQTRDEWSN-CPEAVGEALEWMASATVGLLDMASVGPLTPVCKAFTALIEAAEGAIEVAESVEELVSWCSFLVGVFIEHGKQEGNLRPVAKPMKDFVATTIELAKRAKTLGARGKCTALLCHRRDGKQVQDFDVKLRRIWDDIQGVTLLAFYADFRATLPPKAGDMARVPKNAPQLPPAFVERRDLVKAVVQDLVAMDRATNTAHVLRGMPGGGKTVAANAVVRCEDVRRSFKDGIFWVRVGQVGTGNPMALLEGLAQNLAPAPTHQPRTVPHEFVDVEHTLSHLQGVRKEGNLRCLVVLDDVWDAQIVPLFLRIGFHSLVTTRDLAVIPRDLRGVCTEVEMLTNAEALELLKNASRATMAIPTNEGLKVADDCGFLPLPLAIVGAMGSSRADPDSADTWRGIHALLQQEPQLVQDPVGGVLAVSFRELNGAARTRFRKLGVLAKGVRAPVDMVAHLWE 1590
RK WPAF+H EW+N CPE VGEAL WMAS VGLL++ASVGPL P+C+AF LI+AAEGA E E++ EL++WC+FL V ++HGK+ L PV KP++DFV+TT +LAKRAK L R KC ALLC RDGKQ+QDFD KLR IW+DIQGVT+L A+FRA PPK G+MA++P NAP LPPAFVER LV+AV QDL A +RAT+TA VLRG+PGGGKTVAA++VVRCE+VRRSFKDGIFWV+VGQVGTGNP ALL+GLA++LA AP+++PRTVPHEF DVEH +SHL GV ++GNLRCLVVLD+VWD ++VPLFLR GF LVTTRD+A++PR L G CT V+MLT AEALELLK ASRAT +IP +EGL+VADDCGFLPL +AI+GAMGSSR +P S +TWRG+HA L +EP LVQD VGG LAVSFREL+ AR RFRKLGVLA+GVRAPVDMVAHLWE
Sbjct: 19 RKKWPAFLHG------EWANGCPEDVGEALAWMASGVVGLLNVASVGPLMPICEAFKGLIQAAEGAAEADENLRELIAWCAFLTDVLLQHGKEVDALAPVMKPLRDFVSTTNQLAKRAKRLATRRKCAALLCFARDGKQIQDFDAKLRSIWNDIQGVTILWVSAEFRAARPPKTGEMAKIPHNAPALPPAFVERSGLVEAVAQDLAAAERATDTADVLRGIPGGGKTVAASSVVRCENVRRSFKDGIFWVQVGQVGTGNPTALLKGLAEDLAHAPSNRPRTVPHEFRDVEHVVSHLVGVLEQGNLRCLVVLDNVWDREMVPLFLRTGFRCLVTTRDVAMVPRHLWGTCTPVDMLTEAEALELLKKASRATSSIPRDEGLEVADDCGFLPLAIAIIGAMGSSRVNPHSPETWRGVHARLVEEPSLVQDHVGGALAVSFRELSEKARARFRKLGVLARGVRAPVDMVAHLWE 482
BLAST of mRNA_E-siliculosus-1a_F_contig1200.1284.1 vs. uniprot
Match: D7G722_ECTSI (NB-ARC and TPR repeat-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G722_ECTSI) HSP 1 Score: 446 bits (1146), Expect = 3.600e-132 Identity = 283/660 (42.88%), Postives = 375/660 (56.82%), Query Frame = 1
Query: 181 QRKPWPAFVHAGLQTRDEWSNCPEAVGEALEWMASATVGLLDMASVGPLTPVCKAFTALIEAAEGAIEVAESVEELVSWCSFLVGVFIEHGKQEGNLRPVAKPMKDFVATTIELAKRAKTLGARGKCTALLCHRRDGKQVQDFDVKLRRIWDDIQGVTLLAFYADFRATLP----PKAGDMARVPKNAPQLPPAFVERRDLVKAVVQDLVAMDRATNTAHVLRGMPGGGKTVAANAVVRCEDVRRSFKDGIFWVRVGQVGTGNPMALLEGLAQNLAPAPTHQPRTVPHEFVDVEHTLSHLQGVRKEGNLRCLVVLDDVWDAQIVPLFLRIGFHSLVTTRDLAVIPRDLRGVCTEVEMLTNAEALELLKNASRATMAIPTNEG----LKVADDCGFLPLPLAIVGAMGSSRADPDSADTWRGIHALLQQEPQLVQ------DPVGGVLAVSFRELNGAARTRFRKLGVLAKGVRAPVDMVAHLWEL-DPDDTTLLLDDLVDKSLVK-VEEHAYYLHDLVLDFAKDELRKLREKEKVRLVTSRQAQYLGRMSVVKDYAKAGEVVGG--FYALMALWRSVEDLSGDDQLETRTYVATMKPSEEGESSEDSAYLNWAVGRLFELQVKFAEAEALYYRCQVVNEKVLGPEHLTLATILHNRAGLL 2106
++KPWPAF+H G + +EW CP V EAL WM ++ VG+L +ASVGPL PVC+AF ALIEAAEGA E + ++ LVS C+FL V I+HG+ G L V KP++DFV TT ELA A GKC A CHR D + F+ LRRI DI V L + F A LP P DMA VP A +LP + R V+ V L + + + + GM GGGK+V A+A VR VR F+ GIFWVRVG+ + +ALL+GLA ++ APT P VPH +E HL V G LVVLDDVW+ ++V F+ +GF L+TTRD +V+ L E+ +T EALELL+ S T+ P ++ KV CG LPL LAI G+M R +A W + L+ + ++ + VL SF L + F K+ VLA G AP++M+ +LWE+ D + T + LV K L+ V Y +HDLVL+FAK +R E+E V+ T+ QAQYLGR+ V++ Y GG + L ALWRSVE LSGD +LE +Y ++ E E+++ A W+VG LF +Q K+AEAE LY R + EKVLGPEH +AT L NRA LL
Sbjct: 79 EKKPWPAFLHIGARATEEWEACPTPVQEALAWMTTSAVGVLGVASVGPLVPVCEAFKALIEAAEGAAECQDKLQSLVSQCAFLATVLIQHGRAVGPLAQVQKPIQDFVVTTNELAGFAARWAKGGKCRAFCCHRPDLSALAGFEECLRRIGSDIALVDGLEHHQSFLAALPSLLPPSLPDMAAVPTGALELPSSSYVERAAVQEVADGLTTPEES-RAPYTVVGMGGGGKSVLASAAVRKPSVREHFRGGIFWVRVGRGAKSSLLALLQGLAWDVGAAPTDAPHGVPHVLDRLEQVQQHLAAVASTGTSPRLVVLDDVWEREVVDAFVPLGFKVLLTTRDRSVV--GLPAGRLELGDMTEEEALELLRKTS-GTVGQPGDDVRTKMTKVVALCGHLPLVLAIAGSMSVVRGKGLTAVAWEELAKELENVAKKMRARGEQSSSMKVVLETSFDSLAVRKQEEFLKMAVLAAGALAPIEMLRNLWEVEDAEGTRDDAEGLVSKCLLHAVGGGGYRVHDLVLEFAKTSIRA--EEETVKKATALQAQYLGRLDVLEGYGDPEHGAGGQGLFFLDALWRSVEKLSGDPELEVASYHNSLGELESCEATKAVARSYWSVGFLFNIQGKYAEAEPLYERSLAIQEKVLGPEHPDVATSLDNRASLL 732
BLAST of mRNA_E-siliculosus-1a_F_contig1200.1284.1 vs. uniprot
Match: A0A6H5JJK0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJK0_9PHAE) HSP 1 Score: 443 bits (1140), Expect = 3.670e-132 Identity = 280/661 (42.36%), Postives = 373/661 (56.43%), Query Frame = 1
Query: 184 RKPWPAFVHAGLQTRDEWSNCPEAVGEALEWMASATVGLLDMASVGPLTPVCKAFTALIEAAEGAIEVAESVEELVSWCSFLVGVFIEHGKQEGNLRPVAKPMKDFVATTIELAKRAKTLGARGKCTALLCHRRDGKQVQDFDVKLRRIWDDIQGVTLL-----AFYADFRATLPPKAGDMARVPKNAPQLPPAFVERRDLVKAVVQDLVAMDRATNTAHVLRGMPGGGKTVAANAVVRCEDVRRSFKDGIFWVRVGQVGTGNPMALLEGLAQNLAPAPTHQPRTVPHEFVDVEHTLSHLQGVRKEGNLRCLVVLDDVWDAQIVPLFLRIGFHSLVTTRDLAVIPRDLRGVCTEVEMLTNAEALELLKNASRATMAIPTNEGLKVADDCGFLPLPLAIVGAMGSSRADPDSADTWRGIHALLQQEPQLVQDP-----VGG---------VLAVSFRELNGAARTRFRKLGVLAKGVRAPVDMVAHLWELDPDDTTLLLDDLVDKSLVKVEEHAYYLHDLVLDFAKDELRKLREKEKVRLVTSRQAQYLGRMSVVKDYAKAGEVVGGFYALMALWRSVEDLSGDDQLETRTYVATM-KPSEEGESSEDSAYLNWAVGRLFELQVKFAEAEALYYRCQVVNEKVLGPEHLTLATILHNRAGLL 2106
+KPWPAF+ A ++TR EW +CPE +ALEWMAS VGLLD+ASVGPL PVCKAFTALIEAA+GA EV E++ ELV+WC+FLVGVFIEHGKQ NL+ +AKP+ + V+TT ELAKRAK + RGKCTAL CH++D K + FD KLRR+W DI+G+ +L + R+ P G MA VP A +LPP+ V+R L +V L A D + GI W+RVG+VG AL E L + PA PR F E + +L + E L LVVLDDVW+ +V G LVTTR +V+ +RG T V + EA ELLK+ S A +A+P E +VA CG+ L LAI G++ + DP+SA TWR + + + Q V+ P +G VL +S L G F L VLA+GV AP M+A +W+ D D V SL++ + ++ LHDL+LDF + EK+ + RQ+QYLGR++V++DY G+ + GFY+L+ LWR + +L G QLE Y A++ K ++ + A+ AVGRL EL+ FAEA+ R + EKVLGPEH LA L+NRA LL
Sbjct: 72 KKPWPAFLRAAVETRGEWDDCPEGATDALEWMASTAVGLLDIASVGPLIPVCKAFTALIEAAQGATEVVENLRELVTWCAFLVGVFIEHGKQVDNLQKIAKPLNELVSTTGELAKRAKVVAGRGKCTALFCHKKDAKTIASFDAKLRRLWTDIRGLAILDIQQIVIRLEERSRPVPVPG-MADVPAAALKLPPSHVKRVGLEAEIVNSLTATDAS----------------------------------GISWLRVGRVGEDQLQALFEALTRGAFPAAKLPPR-----FNSPEEIIQYLTVLVAEDKLPRLVVLDDVWERAVVDTLRPTGLRLLVTTRLDSVVA--MRGGRTTVGNMDGGEARELLKSRSGA-IALPKTEADQVAAACGWHALTLAIAGSLRFVKDDPNSASTWRRLASEMTQTKNSVRGPKMDADIGDDPTKKSLFPVLELSLESLGGDRERLFLSLLVLARGVSAPAPMLASIWDKDDMGARNEADFFVSNSLLQEVDSSFRLHDLLLDFVRTRC----EKKIIDEAVKRQSQYLGRLAVLQDYEAKGDSLEGFYSLIVLWRKLAELCGK-QLEVEVYHASLGKLGDDVSTGASDAFS--AVGRLHELEGNFAEADPFNLRAIEIGEKVLGPEHPDLAVWLNNRAELL 682
BLAST of mRNA_E-siliculosus-1a_F_contig1200.1284.1 vs. uniprot
Match: D7G720_ECTSI (NB-ARC and TPR repeat-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G720_ECTSI) HSP 1 Score: 441 bits (1134), Expect = 1.270e-128 Identity = 281/655 (42.90%), Postives = 377/655 (57.56%), Query Frame = 1
Query: 181 QRKPWPAFVHAGLQTRDEWSNCPEAVGEALEWMASATVGLLDMASVGPLTPVCKAFTALIEAAEGAIEVAESVEELVSWCSFLVGVFIEHGKQEGNLRPVAKPMKDFVATTIELAKRAKTLGARGKCTALLCHRRDGKQVQDFDVKLRRIWDDIQGVTLLAFYADFRATLP----PKAGDMARVPKNAPQLPPAFVERRDLVKAVVQDLVAMDRATNTAHVLRGMPGGGKTVAANAVVRCEDVRRSFKDGIFWVRVGQVGTGNPMALLEGLAQNLAPAPTHQPRTVPHEFVDVEHTLSHLQGVRKEGNLRCLVVLDDVWDAQIVPLFLRIGFHSLVTTRDLAVIPRDLRGVCTEVEMLTNAEALELLKNASRATMAIPTNEG----LKVADDCGFLPLPLAIVGAMGSSRADPDSADTWRGIHALLQQEPQLVQ------DPVGGVLAVSFRELNGAARTRFRKLGVLAKGVRAPVDMVAHLWEL-DPDDTTLLLDDLVDKSLVK-VEEHAYYLHDLVLDFAKDELRKLREKEKVRLVTSRQAQYLGRMSVVKDYAKAGEVVG--GFYALMALWRSVEDLSGDDQLETRTYVATMKPSEEGESSEDSAYLNWAVGRLFELQVKFAEAEALYYRCQVVNEKVLGPEHLTLATILHN 2091
++KPWPAF+H G + +EW CP V EAL WM ++ VG+L +ASVGPL PVC+AF ALIEAAEGA E + ++ LVS C+FL V I+HG+ G L V KP++DFVATT ELA A GKC A CHR D + F+ LRRI DI V L + F A LP P DMA VP A +LP + R V+ V L A + + + + GM GGGK+V A+AVVR VR F+ GIFWVRVG+ + +ALL+GLA+++ APT P VP +E HL V G + LVVLDDVW+ ++V F+ +GF L+TTRD +V+ + E+ +T EALELL+ S A + P ++ KV CG LPL LAI G+M R +A W + L+ + ++ + VL SF L + F K+ VLA G AP++M+ +LWE+ D + T + LV K L+ V Y +HDLVL+FAK +R E+E V+ T+ QAQYLGR+ V++ Y G G + L ALWRSVE LSGD LE +Y A+++ E E++E A +VG LF +Q K+AEAE LY R + + EKVLGPEH +AT L+N
Sbjct: 62 EKKPWPAFLHIGARATEEWEACPTPVQEALAWMTTSAVGVLGVASVGPLVPVCEAFKALIEAAEGAAECQDKLQSLVSQCAFLATVLIQHGRAVGPLAQVQKPIQDFVATTNELAGFAARWAKGGKCRAFFCHRPDLSALAGFEECLRRIRSDIALVDGLEHHQSFLAALPSLLPPSLPDMAAVPAGALELPSSSYVERAAVQEVADGLTAPEES-RAPYTVVGMGGGGKSVLASAVVRKPSVREHFRGGIFWVRVGRGAKSSLLALLQGLARDVGAAPTDAPCGVPRVLDSLEQVRQHLAAVTSTGTSQRLVVLDDVWEREVVDAFVPLGFKVLLTTRDRSVV--GVPAGRLELGDVTEEEALELLRKTSGA-VGQPGDDVRTKMTKVVALCGHLPLVLAIAGSMSVVRGKGLTAVAWEELAKELENVAKKMRARGEQSSSMKVVLETSFDSLAVRKQEEFLKMAVLAAGALAPIEMLRNLWEIEDAEGTRDDAEGLVSKCLLHAVGGGGYRVHDLVLEFAKTSIRA--EEETVKKATALQAQYLGRLDVLESYGDPEHGTGDQGLFFLDALWRSVEKLSGDPGLEVASYRASLEELESCEATEAVATSYGSVGFLFNIQSKYAEAEPLYERSRAIQEKVLGPEHPHVATSLNN 710
BLAST of mRNA_E-siliculosus-1a_F_contig1200.1284.1 vs. uniprot
Match: A0A6H5KXS7_9PHAE (NB-ARC domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KXS7_9PHAE) HSP 1 Score: 418 bits (1074), Expect = 4.750e-128 Identity = 280/689 (40.64%), Postives = 372/689 (53.99%), Query Frame = 1
Query: 181 QRKPWPAFVHAGLQTRDEWSNCPEAVGEALEWMASATVGLLDMASVGPLTPVCKAFTALIEAAEGAIEVAESVEELVSWCSFLVGVFIEHGKQEGNLRPVAKPMKDFVATTIELAKRAKTLGARGKCTALLCHRRDGKQVQDFDVKLRRIWDDIQGVTLLAFYADFRATLP----PKAGDMARVPKNAPQLPPAFVERRDLVKAVVQDLVAMDRATNTAHVLRGMPGGGKTVAANAVVRCEDVRRSFKDGIFWVRVGQVGTGNPMALLEGLAQNLAPAPTHQPRTVPHEFVDVEHTLSHLQGVRKEGNLRCLVVLDDVWDAQIVPLFLRIGFHSLVTTRDLAVIPRDLRGVCTEVEMLTNAEALELLKNASRATMAIPTNEG----LKVADDCGFLPLPLAIVGAMGSSRADPDSADTWRGIHALLQQEPQLVQ------DPVGGVLAVSFRELNGAARTRFRKLGVLAKGVR-----------------------------APVDMVAHLWEL-DPDDTTLLLDDLVDKSLVK-VEEHAYYLHDLVLDFAKDELRKLREKEKVRLVTSRQAQYLGRMSVVKDYAKAGEVVGG--FYALMALWRSVEDLSGDDQLETRTYVATMKPSEEGESSEDSAYLNWAVGRLFELQVKFAEAEALYYRCQVVNEKVLGPEHLTLATILHNRAGLL 2106
+++PWPAF+H + +EW CP EAL W+A+ATVG+LD+ASVGPL PVC+AF ALIEAAEGA E ++ LVS C+FL V I+HG+ G L V KP++DFV TT +LA A GKC A CHR D + DF+ LRRI DI V L + F A LP P DMA VP A +LP + R V+ V L + + + + GM GGGK+V A+AVVR VR F+ GIFWVRVG+ + +ALL+GLA+ + A T P TVPH +E HL V G LVVLDDVW+ ++V F+ +GF L+TTRD +V+ + EV +T EALELL+ +S A + P ++ KV CG LPL LAI G+M + +A W+ + L+ + ++ + VL SF L + F KL VLA AP++M+ +LWE+ D + T + LV K L+ V Y +HDLVL++AK +R + E VR VT+ QA +LGR+ V+K Y G + L ALWRSVE LSGD +LE E E++E A W+VG LF +Q K+AEAE LY R Q + E VLGPEH + T L+NRA LL
Sbjct: 25 EKRPWPAFLHIEARATEEWEACPTVAQEALTWIATATVGVLDVASVGPLVPVCEAFKALIEAAEGAAESQHKLQSLVSQCAFLATVLIQHGRAVGPLAQVHKPIEDFVVTTNDLAGFAARWANGGKCRAFFCHRPDLSALADFEECLRRIRSDIALVDGLEHHQSFLAALPSLLPPSLPDMAAVPAGALELPCSSYVERAAVQEVADGLTSPEDP-RAPYTVVGMGGGGKSVLASAVVRKPSVREHFRGGIFWVRVGRGAKSSLLALLQGLAREMGAARTDAPHTVPHVLDGLEQVKQHLAAVASTGTFPRLVVLDDVWEREVVDAFVPLGFKVLLTTRDRSVVVVPAGRL--EVGDMTEEEALELLRKSSGA-VGQPGDDVRTKMTKVVALCGHLPLVLAIAGSMSVVKGKGLTAVAWKELAENLENVAKKMRARGEQSSSINAVLETSFDSLAVRKQEEFLKLAVLAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXALAPIEMLRNLWEIEDAEGTRDEAEGLVSKCLLHAVGGGGYRVHDLVLEYAKTRIRA--DAEMVRKVTALQAHFLGRLDVLKSYRDPEHGAGNQSLFFLDALWRSVEKLSGDPELEVAL--------ESCEATEAVARSYWSVGFLFNIQGKYAEAEPLYERSQAIQENVLGPEHPDVGTSLNNRALLL 699
BLAST of mRNA_E-siliculosus-1a_F_contig1200.1284.1 vs. uniprot
Match: D8LGG5_ECTSI (NB-ARC and TPR repeat-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LGG5_ECTSI) HSP 1 Score: 427 bits (1097), Expect = 4.900e-122 Identity = 275/661 (41.60%), Postives = 376/661 (56.88%), Query Frame = 1
Query: 181 QRKPWPAFVHAGLQTRDEWSNCPEAVGEALEWMASATVGLLDMASVGPLTPVCKAFTALIEAAEGAIEVAESVEELVSWCSFLVGVFIEHGKQEGNLRPVAKPMKDFVATTIELAKRAKTLGARGKCTALLCHRRDGKQVQDFDVKLRRIWDDIQGVTLLAFYADFRATLP----PKAGDMARVPKNAPQLPPAFVERRDLVKAVVQDLVAMDRATNTAHVLRGMPGGGKTVAANAVVRCEDVRRSFKDGIFWVRVGQVGTGNPMALLEGLAQNLAPAPTHQPRTVPHEFVDVEHTLSHLQGV-RKEGNLRCLVVLDDVWDAQIVPLFLRIGFHSLVTTRDLAVIPRDLRGVCTEVEMLTNAEALELLKNASRATMAIPTN----EGLKVADDCGFLPLPLAIVGAMGSSRADPDSADTWRGIHALLQQEPQLVQ------DPVGGVLAVSFRELNGAARTRFRKLGVLAKGVRAPVDMVAHLWEL-DPDDTTLLLDDLVDKSLVK-VEEHAYYLHDLVLDFAKDELRKLREKEKVRLVTSRQAQYLGRMSVVKDYAKAGEVVG--GFYALMALWRSVEDLSGDDQLETRTYVATMKPSEEGESSEDSAYLNWAVGRLFELQVKFAEAEALYYRCQVVNEKVLGPEHLTLATILHNRAGLL 2106
+++PWPAF+H G + +EW CP EAL WM +A VG+LD+ASVGPL PVC+A ALIEAAEGA E + V+ LVS C+FL V I+HG+ G L V KP++DFV TT ELA A GKC A CHR D + F+ LR I DI V L + F A LP P+ DMA VP A LP +VER V+ V L A + + + G+ GGGK+V A+AVVR VR F+ GI WVRVG+ + + LL+GLA+ + APT P VP +E HL V G LVVLDDVW+ ++V + +GF L+TTRD +V+ R + ++ +T EALELL+ S T+ P + + KV CG LPL LAI G+M + + +A W + + + ++ + VL SF L + F ++ VLA G AP++M+ +LWE+ D + T + LV+K L+ V + Y +HD+VL+FAK +R ++E V T+ QAQ+LGR+ V+K Y G G + L +LWRSVE LSGD +LE TY A+++ E +++ED A AVG LF+ Q K+ EAE L+ R Q + EKVLGPEH +A L+NRA LL
Sbjct: 37 EKRPWPAFLHIGARATEEWEACPTLAQEALTWMTTAAVGVLDVASVGPLVPVCQALKALIEAAEGAAECEDKVQSLVSQCAFLATVLIQHGRAVGALAQVHKPIQDFVVTTNELAGFAARWAKDGKCRAFFCHRPDLSALAGFEECLRGIRSDIALVDGLEQHQLFLAALPSLRPPRLLDMAAVPAGALDLPRGYVERA-AVQEVADGLTAPEEP-RAPYTVVGLGGGGKSVLASAVVRKPSVREHFRGGISWVRVGRGAKNSLLPLLQGLAREMGVAPTDAPHAVPQVLDSLEQVQQHLAAVVASTGTSPRLVVLDDVWEREVVDALVPLGFKVLLTTRDWSVVVVPARRL--DLGDMTEEEALELLRKTS-GTVGQPGDYVRMKMTKVVALCGHLPLVLAIAGSMSAVKGKGLTAVAWEELAKSFENVAKKMRARGQQSSAIKVVLETSFDSLAVQKQEEFLRMSVLAAGALAPIEMLRNLWEIEDAEGTRDEAEGLVNKCLLHAVGDGGYRVHDMVLEFAKTSIRA--DEETVEKATALQAQFLGRLDVLKSYRDPEHGAGDRGLFFLDSLWRSVEKLSGDPELEVTTYRASLRELESCKATEDMASSYSAVGFLFDAQRKYIEAEPLHERAQAMQEKVLGPEHPGVAQSLNNRADLL 690
BLAST of mRNA_E-siliculosus-1a_F_contig1200.1284.1 vs. uniprot
Match: A0A6H5J6Q8_9PHAE (NB-ARC domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J6Q8_9PHAE) HSP 1 Score: 357 bits (917), Expect = 1.350e-105 Identity = 249/664 (37.50%), Postives = 345/664 (51.96%), Query Frame = 1
Query: 184 RKPWPAFVHAGLQTRDEWSNCPEAVGEALEWMASATVGLLDMASVGPLTPVCKAFTALIEAAEGAIEVAESVEELVSWCSFLVGVFIEHGKQEGNLRPVAKPMKDFVATTIELAKRAKTLGARGKCTALLCHRRDGKQVQDFDVKLRRIWDDIQGVTLLAFYADFRATLPPKAGDMARVPKNAPQLPPAFVERRDLVKAVVQDLVAMDRATNTAHVLRGMPGGGKTVAANAVVRCEDVRRSFKDGIFWVRVGQVGTGNPMALLEGLAQNLAPAPTHQPRTVPHEFVDVEHTLSHLQGVRKEGNLRCLVVLDDVWDAQIVPLFLRIGFHSLVTTRDLAVIPRDLRGVCTEVEMLTNAEALELLKNASRATMAIPTNEGLKVADDCGFLPLPLAIVGAMGSSRADPDSADTWRGIHALLQQEPQLVQDPVGGVLAVSFRELNGAARTRFRKLGVLAKGVRAPVDMVAHLWEL---------------DPDDTTLLLDDLVDKSLVKVEEHAYYLHDLVLDFAKDELRKLREKEKVRLVTSRQAQYLGRMSVVKDYAKAGEVVGGFYALMALWRSVEDLSGDDQLETRTYVATMKPSEEGESSEDSAYLNWAVGRLFELQV--------KFAEAEALYYRCQVVNEKVLGPEHLTLATILHNRAGLL 2106
+KPWPAF+ AG+ EW NCPE +ALEWMAS VGLLD+ASVGPLTPVCKAFTALIEAA+GA+EV +++ ELV+WC+FLVGV IEHGKQ NL+ V KP+ +FVATT ELAKRA + RGK + P DMA VP A +LPP+ V+R L +++ L D A+ +VL G+ G GK++ A++VVR E+VR+ F+ G FW+RVG G AL + LA+ + PA +P +F +E + HL V E L L+VLDDV + +V G LVTTR +++ +RG T V + AEA ELLK+ S G + LP + AD + A + P ++ + VL +S + L F L VLA+GV AP M+A +W++ D D V SL++ + ++ +HDL+LDFA+ EKE + RQ+QYL R++V++DY G+ + G Y+L+ LWR + + G++Q+E Y A++ + ES+ +A AVGRL L+ K EA LY R + E LGPEH +AT L+NRA LL
Sbjct: 36 KKPWPAFLCAGVDVHGEWDNCPEGARDALEWMASTAVGLLDIASVGPLTPVCKAFTALIEAAQGAMEVVKNLRELVTWCAFLVGVLIEHGKQVENLKAVNKPLNEFVATTGELAKRANVVAGRGKME--------------------------------------ERSRPLPLPDMADVPAAALKLPPSHVKRVGLEAEILKSLTTTD-ASGAPYVLLGVGGAGKSLLASSVVRTEEVRKHFRAGAFWLRVGPGGEDQLFALCDILARKVTPA-----TKLPQQFNSLEDIIQHLTVVVAEDRLPRLMVLDDVLERAVVDTLRPTGLRLLVTTRLDSLVA--VRGGRTVVGNMDRAEARELLKSKS------------------GAIELP--------ETEADQTKTILGPQMDADIGDNP--TKESLFHVLDLSLKYLGRHQHRLFLSLVVLARGVSAPAPMLASIWDMVGLCVIKCATSLEKVDNMGARNEADFFVSNSLLQEVDGSFRVHDLLLDFARTRC----EKEILDEAVKRQSQYLRRLAVLQDYRAKGDPLEGLYSLIVLWRKLAEHCGNEQVEVEAYHASLGELGDDESA-GAADAFSAVGRLLGLETHLYVSFQGKLDEAGPLYDRAIRIWEAALGPEHSQVATALNNRARLL 620
BLAST of mRNA_E-siliculosus-1a_F_contig1200.1284.1 vs. uniprot
Match: D7G6W2_ECTSI (NB-ARC and TPR repeat-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G6W2_ECTSI) HSP 1 Score: 370 bits (951), Expect = 2.880e-104 Identity = 265/668 (39.67%), Postives = 340/668 (50.90%), Query Frame = 1
Query: 181 QRKPWPAFVHAGLQTRDEWSNCPEAVGEALEWMASATVGLLDMASVGPLTPVCKAFTALIEAAEGAIEVAESVEELVSWCSFLVGVFIEHGKQEGNLRPVAKPMKDFVATTIELAKRAKTLGARGKCTALLCHRRDGKQVQDFDVKLRRIWDDIQGVT-------LLAFYADFRATLPPKAGDMARVPKNAPQLPPAFVERRDLVKAVVQDLVAMDRATNTAH-----VLRGMPGGGKTVAANAVVRCEDVRRSFKDGIFWVRVGQVGTGNPMALLEGLAQNLAPAPTHQPRTVPHEFVDVEHTLSHLQGVRKEGNLRCLVVLDDVWDAQIVPLFLRIGFHSLVTTRDLAVIPRDLRGVCTEVEMLTNAEALELLKNASRAT--MAIPTNEGLKVADDCGFLPLPLAIVGAMGSSRADPDSADTWRGIHALLQQEPQL---------VQDPVGGVLAVSFREL--NGAARTRFRKLGVLAKGVRAPVDMVAHLWELDPDDTTLLLDDLVDKSLVKVEEHAYYLHDLVLDFAKDELRKLREKEKVRLVTSRQAQYLGRMSVVKDYAKAGEVVGGFYALMALWRSVEDLSGDDQLETRTYVATMKPSEEGESSEDSAYLNWA-VGRLFELQVKFAEAEALYYRCQVVNEKVLGPEHLTLATILHNRAGLL 2106
++KPWPAF+H G + +EW CP V EAL WMA ATVG+LD+ASVGPL PVC+AF LIEAAEGA E + ++ L+S C+FL V I+H + G L V KPMKDFVATT +LA A T GKC AL CHR D + DF+ LR I +DI V LLA Y R PP MA VP L + R L+ + L TNTA VL GM G GK+V A+AVVR E VR F G+FWVR A LEG A +A T VE +L+ V + LVVLDDVW+ +IV G LVTTRD +V+ + G C EV + EALE+L+ A+ + +P E L+ P +WR +H L + V V VL VS + + A + R L VLA G AP DM+ LW+ P T LVD+S+++ A+ +HDLVL F K KL+ + TSR A+YLG++ V++ Y GE G YALMALWRSVEDL G+ ++ Y+ ++ E + W GR+ EL K+AEA+ LY R + E LGP+H LAT L+NRAGLL
Sbjct: 34 EKKPWPAFLHIGARATEEWEACPTPVQEALVWMARATVGVLDIASVGPLEPVCQAFKGLIEAAEGAAESQDKLKGLISRCAFLTTVLIQHDRAVGPLAQVQKPMKDFVATTNDLAAFAATWAKGGKCRALFCHRSDRSTLTDFEEGLRTISNDIALVDGLEHHQLLLAVYRQLR---PPTLPAMASVPAGPISLTDGHISRPSLLGRAIGYL------TNTAVGDAPCVLTGMAGAGKSVLASAVVRDEKVREHFHAGMFWVRARDA-KDQLHACLEGFALRVASTSG----TTSPGLGSVEEVTRYLKAVCADSVSPRLVVLDDVWEREIVDALKLTGLQLLVTTRDRSVV--SMPGECVEVGDMEEDEALEVLRVGCGASKNLELPRAEALQ----------------------GPPQDPKSWRTLHEALSKAMSTRLGTDRIMAVPKRVDAVLEVSLGAMADDPAKQQRCLFLAVLAPGTLAPSDMLEDLWDEAPGATKTFAAQLVDQSMLQPAGDAFRVHDLVLLFLKP---KLKADPNRPIATSRFAEYLGQLKVLRRYLGDGETSDGVYALMALWRSVEDLVGESRV-AAVYMNNLQGVPE--------HAPWRQAGRVLELMGKYAEADPLYLRAIEIGENTLGPDHPALATQLNNRAGLL 651
BLAST of mRNA_E-siliculosus-1a_F_contig1200.1284.1 vs. uniprot
Match: A0A6H5KK53_9PHAE (NB-ARC domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KK53_9PHAE) HSP 1 Score: 332 bits (850), Expect = 1.590e-99 Identity = 192/395 (48.61%), Postives = 246/395 (62.28%), Query Frame = 1
Query: 184 RKPWPAFVHAGLQTRDEWSNCPEAVGEALEWMASATVGLLDMASVGPLTPVCKAFTALIEAAEGAIEVAESVEELVSWCSFLVGVFIEHGKQEGNLRPVAKPMKDFVATTIELAKRAKTLGARGKCTALLCHRRDGKQVQDFDVKLRRIWDDIQGVTLLAFYADF----RATLPPKAGDMARVPKNAPQLPPAFVERRDLVKAVVQDLVAMDRATNTAHVLRGMPGGGKTVAANAVVRCEDVRRSFKDGIFWVRVGQVGTGNPMALLEGLAQNLAPAPTHQPRTVPHEFVDVEHTLSHLQGVRKEGNLRCLVVLDDVWDAQIVPLFLRIGFHSLVTTRDLAVIPRDLRGVCTEVEMLTNAEALELLKNASRATMAIPTNEGLKVADDCGFLPLPL 1356
+KPWPAF+ AG+ EW NCPE +ALEWMAS VGLLD+ASVGPLTPVC+AFTALIEAA+GA+EV E++ ELV+WC+FLVGV IEHGKQ NL+ V KP+ +FVATT ELAKRA + R KC A LCH++D K + FD KLRR W DIQG+ +L + P DMA VP A +LPP+ V+R L +++ L A D A+ +VL GM G GK++ A++VVR E+VR+ F+ G FW+RVG G AL EGLA+ P +P F +E + HL + E L LVVLDDVW+ +V + G LVTTR +V+ +RG T V + EA ELLK+ S A + +P E AD G LP P+
Sbjct: 36 KKPWPAFLCAGVDVHGEWDNCPEGARDALEWMASTAVGLLDVASVGPLTPVCQAFTALIEAAQGAMEVVENLRELVTWCAFLVGVLIEHGKQVDNLKAVNKPLNEFVATTGELAKRANVVAGRSKCMAFLCHKKDAKMMASFDDKLRRFWTDIQGLAVLDIQEIVTRMEERSRPLPLPDMADVPAAALKLPPSHVKRVGLEAEILKSLTATD-ASGAPYVLLGMGGAGKSLLASSVVRTEEVRKHFRAGAFWLRVGPGGEDQLQALFEGLARLAIPE-----AKLPQRFNSLEEIIQHLTVLVAEDKLPRLVVLDDVWERAVVDILRPTGLRLLVTTRLDSVVA--VRGGRTVVGNMATGEARELLKSKSGA-ITLPETE----ADQVG-LPRPV 416 The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig1200.1284.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-siliculosus-1a_F_contig1200.1284.1 >prot_E-siliculosus-1a_F_contig1200.1284.1 ID=prot_E-siliculosus-1a_F_contig1200.1284.1|Name=mRNA_E-siliculosus-1a_F_contig1200.1284.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=1165bp ATSLGVATTARHQQEKVLPSRVSNGENGSASSIQRWQRSGRRNRGTRNRRback to top mRNA from alignment at E-siliculosus-1a_F_contig1200:2480..11060+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-siliculosus-1a_F_contig1200.1284.1 ID=mRNA_E-siliculosus-1a_F_contig1200.1284.1|Name=mRNA_E-siliculosus-1a_F_contig1200.1284.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=8581bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1200:2480..11060+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top Coding sequence (CDS) from alignment at E-siliculosus-1a_F_contig1200:2480..11060+ >mRNA_E-siliculosus-1a_F_contig1200.1284.1 ID=mRNA_E-siliculosus-1a_F_contig1200.1284.1|Name=mRNA_E-siliculosus-1a_F_contig1200.1284.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=6990bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1200:2480..11060+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top |