mRNA_E-siliculosus-1a_F_contig11992.1260.1 (mRNA) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E-siliculosus-1a_F_contig11992.1260.1
Unique NamemRNA_E-siliculosus-1a_F_contig11992.1260.1
TypemRNA
OrganismEctocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig11992.1260.1 vs. uniprot
Match: L9U9C5_9GAMM (Uncharacterized protein n=17 Tax=Halomonadaceae TaxID=28256 RepID=L9U9C5_9GAMM)

HSP 1 Score: 516 bits (1330), Expect = 1.200e-182
Identity = 253/334 (75.75%), Postives = 279/334 (83.53%), Query Frame = 1
Query:   28 EGVHEALAHV-------AVRDLAWLIATPDLIELPPPIPRAGRPSLAELGLTDNVENWLTTQAAAPLGPLNGSRATRMGHYHERLWHTLLDHAPNTRLLAHNVRITRKRNTLGELDIVYRTRDNPAPVHLEVAIKFYLGLPEGPGAANSQSRWIGPGGLDSLALKCAHLHRHQLPLSTTLPALEALAHWLAPRDLGVSDTRLGEQLTQRLAMPGVLYYPWHAEMLAPEGATADHRRGRWCFLSDWPELLARFTDMPRVARLEKPHWLAPPQLNAFRPAMEVLPAIMDRVQTRRSPQQVMLYYA----NEKRYERLFLVPNDWPRQVPIPPRVRD 996
            EG+  AL +V        +RDLAWLI+TPDL+ LPPPIP  GRP++ ELGL   +  WL     +PL  LNGSRATRMGHYHERLWH LLDHAPNTRLLA NVRITR+RNTLGELD++YRTRDNPAP+HLEVAIKFYLGLPEGPGAANSQSRWIGPGGLDSLALKC+HL RHQLPLSTT PALE L HWL PRDLGVSD RLGEQLTQRLAMPGVLYYPWHA M APEGATADHRRG WC+L DWP L ARF  MPR+A LEKPHWLAPP L+AFRPA E LPAI+++V   RSPQQVML ++    NE+RYERLFLVP+DWPRQVP+PPR+RD
Sbjct:    4 EGIDGALENVELGNTVSVLRDLAWLISTPDLVVLPPPIPCGGRPTIKELGLEKALLPWLRKLGLSPLTALNGSRATRMGHYHERLWHMLLDHAPNTRLLARNVRITRQRNTLGELDMLYRTRDNPAPIHLEVAIKFYLGLPEGPGAANSQSRWIGPGGLDSLALKCSHLRRHQLPLSTTAPALETLTHWLTPRDLGVSDLRLGEQLTQRLAMPGVLYYPWHAAMPAPEGATADHRRGTWCYLRDWPALAARFPAMPRMAWLEKPHWLAPPPLSAFRPAAEQLPAIIEKVHAWRSPQQVMLCFSEREHNEQRYERLFLVPDDWPRQVPLPPRIRD 337          
BLAST of mRNA_E-siliculosus-1a_F_contig11992.1260.1 vs. uniprot
Match: A0A246RV39_9GAMM (Uncharacterized protein n=5 Tax=Halomonas TaxID=2745 RepID=A0A246RV39_9GAMM)

HSP 1 Score: 509 bits (1312), Expect = 5.320e-180
Identity = 247/322 (76.71%), Postives = 269/322 (83.54%), Query Frame = 1
Query:   43 ALAHVAVRDLAWLIATPDLIELPPPIPRAGRPSLAELGLTDNVENWLTTQAAAPLGPLNGSRATRMGHYHERLWHTLLDHAPNTRLLAHNVRITRKRNTLGELDIVYRTRDNPAPVHLEVAIKFYLGLPEGPGAANSQSRWIGPGGLDSLALKCAHLHRHQLPLSTTLPALEALAHWLAPRDLGVSDTRLGEQLTQRLAMPGVLYYPWHAEMLAPEGATADHRRGRWCFLSDWPELLARFTDMPRVARLEKPHWLAPPQLNAFRPAMEVLPAIMDRVQTRRSPQQVMLYYA----NEKRYERLFLVPNDWPRQVPIPPRVRD 996
            AL    +RDLAWL+ATPDL+ELPPPIP  GRP+L ELGL   +  WL      PL  LNGSRATRMGHYHERLWHTLLDHAPNTRLLA NVRITR+RNTLGELD++YRTRDNPAP+HLEVAIKFYLGLPEGPGAANSQ+RWIGPGGLDSLALKC HL RHQLPLSTT PALE LAHWL PRDLG SD RLGEQLTQRLAMPGVLYYPWHA M APEGATADHRRG WC+L DWP L A F+  P +  LEKPHWLAPP  + FRPA EVLP ++DRV T RSPQQVML Y     +E+RY+RLF+VP+DWPRQVP+PPRVRD
Sbjct:   10 ALLSSVLRDLAWLVATPDLVELPPPIPCGGRPTLKELGLEGALLPWLGQLGRPPLTALNGSRATRMGHYHERLWHTLLDHAPNTRLLARNVRITRQRNTLGELDMLYRTRDNPAPIHLEVAIKFYLGLPEGPGAANSQTRWIGPGGLDSLALKCTHLQRHQLPLSTTAPALETLAHWLTPRDLGGSDLRLGEQLTQRLAMPGVLYYPWHAAMPAPEGATADHRRGIWCYLRDWPALSASFSATPSMIELEKPHWLAPPPASVFRPAAEVLPTVIDRVNTWRSPQQVMLCYPTREHSEQRYQRLFIVPDDWPRQVPLPPRVRD 331          
BLAST of mRNA_E-siliculosus-1a_F_contig11992.1260.1 vs. uniprot
Match: A0A1J8PCT5_9GAMM (Uncharacterized protein n=1 Tax=Halomonas sp. QHL1 TaxID=1123773 RepID=A0A1J8PCT5_9GAMM)

HSP 1 Score: 509 bits (1311), Expect = 7.280e-180
Identity = 246/319 (77.12%), Postives = 265/319 (83.07%), Query Frame = 1
Query:   37 HEALAHVAVRDLAWLIATPDLIELPPPIPRAGRPSLAELGLTDNVENWLTTQAAAPLGPLNGSRATRMGHYHERLWHTLLDHAPNTRLLAHNVRITRKRNTLGELDIVYRTRDNPAPVHLEVAIKFYLGLPEGPGAANSQSRWIGPGGLDSLALKCAHLHRHQLPLSTTLPALEALAHWLAPRDLGVSDTRLGEQLTQRLAMPGVLYYPWHAEMLAPEGATADHRRGRWCFLSDWPELLARFTDMPRVARLEKPHWLAPPQLNAFRPAMEVLPAIMDRVQTRRSPQQVMLYYANEKRYERLFLVPNDWPRQVPIPPRVR 993
            +E L    +RDLAWL+ATPDL+ELPPPIP  GRP++ ELGL   +  WL      PL  LNGSRATRMGHYHERLWHTLLDHAPNTRLLA NVRITR+RNTLGELD++YRTRDNPAPVHLEVAIKFYLGLPEGPG   SQSRWIGPGGLDSLALKC HL RHQLPLSTT PAL+AL+HWL PRDLGV D RL EQLTQRLAMPGVLYYPWHA M APEGATADHRRG WC+L DWP L ARF  MPR+  LEKPHWLA P L+AFRPA E+LPAI+DRVQ  RSPQQVMLY   E+ YERLFLVPNDWP QVP+PP  R
Sbjct:   12 NEELGSTVLRDLAWLVATPDLVELPPPIPCGGRPTIKELGLEQALLPWLRQLGRPPLIALNGSRATRMGHYHERLWHTLLDHAPNTRLLARNVRITRQRNTLGELDMLYRTRDNPAPVHLEVAIKFYLGLPEGPGDLKSQSRWIGPGGLDSLALKCTHLRRHQLPLSTTAPALQALSHWLTPRDLGVPDRRLVEQLTQRLAMPGVLYYPWHAAMPAPEGATADHRRGTWCYLRDWPALAARFPSMPRMVWLEKPHWLATPPLSAFRPAEELLPAIIDRVQAWRSPQQVMLYCPEEEHYERLFLVPNDWPHQVPLPPAAR 330          
BLAST of mRNA_E-siliculosus-1a_F_contig11992.1260.1 vs. uniprot
Match: A0A1A9R407_9GAMM (Uncharacterized protein n=3 Tax=unclassified Halomonas TaxID=2609666 RepID=A0A1A9R407_9GAMM)

HSP 1 Score: 504 bits (1298), Expect = 7.190e-178
Identity = 245/316 (77.53%), Postives = 266/316 (84.18%), Query Frame = 1
Query:   58 AVRDLAWLIATPDLIELPPPIPRAGRPSLAELGLTDNVENWLTTQAAAPLGPLNGSRATRMGHYHERLWHTLLDHAPNTRLLAHNVRITRKRNTLGELDIVYRTRDNPAPVHLEVAIKFYLGLPEGPGAANSQSRWIGPGGLDSLALKCAHLHRHQLPLSTTLPALEALAHWLAPRDLGVSDTRLGEQLTQRLAMPGVLYYPWHAEMLAPEGATADHRRGRWCFLSDWPELLARFTDMPRVARLEKPHWLAPPQLNAFRPAMEVLPAIMDRVQTRRSPQQVMLYYANE----KRYERLFLVPNDWPRQVPIPPRVR 993
            A+RDLAWL+ATPDL+ELPPPIP AGRP+L ELGL + +  WL      PL  LNGSRATRMGHYHERLWHTLLDHAPNTRLLA NVRITRKR TLGELD++YRTRDNPAPVHLEVAIKFYLGLPEGPGA  SQSRWIGPGGLDSLALKC HL RHQLPLS TLPALE LAHWL PRDLGVS   L EQLTQRLAMPGVLYYPWHA+M APEGATADHRRG WC+L DWPEL A    MP++  LEKPHWL+PP  +AFRPA EVLPAI+++V   RSPQQVML Y+ E    +RYERLFLVP+DWPRQVP+PPR R
Sbjct:   15 ALRDLAWLVATPDLVELPPPIPCAGRPTLKELGLANALLPWLRQLGRPPLAALNGSRATRMGHYHERLWHTLLDHAPNTRLLARNVRITRKRTTLGELDMLYRTRDNPAPVHLEVAIKFYLGLPEGPGAPTSQSRWIGPGGLDSLALKCTHLQRHQLPLSNTLPALETLAHWLTPRDLGVSQASLSEQLTQRLAMPGVLYYPWHAKMPAPEGATADHRRGTWCYLRDWPELAASLPAMPKMVWLEKPHWLSPPLRSAFRPAAEVLPAIIEKVHAWRSPQQVMLCYSEEAPEEQRYERLFLVPDDWPRQVPLPPRGR 330          
BLAST of mRNA_E-siliculosus-1a_F_contig11992.1260.1 vs. uniprot
Match: A0A101D478_9GAMM (Uncharacterized protein n=1 Tax=Halomonas sp. 54_146 TaxID=1635257 RepID=A0A101D478_9GAMM)

HSP 1 Score: 505 bits (1300), Expect = 7.620e-178
Identity = 243/310 (78.39%), Postives = 265/310 (85.48%), Query Frame = 1
Query:   61 VRDLAWLIATPDLIELPPPIPRAGRPSLAELGLTDNVENWLTTQAAAPLGPLNGSRATRMGHYHERLWHTLLDHAPNTRLLAHNVRITRKRNTLGELDIVYRTRDNPAPVHLEVAIKFYLGLPEGPGAANSQSRWIGPGGLDSLALKCAHLHRHQLPLSTTLPALEALAHWLAPRDLGVSDTRLGEQLTQRLAMPGVLYYPWHAEMLAPEGATADHRRGRWCFLSDWPELLARFTDMPRVARLEKPHWLAPPQLNAFRPAMEVLPAIMDRVQTRRSPQQVMLYYANEKRYERLFLVPNDWPRQVPIPPRV 990
            +RDLAWLIATPDL+ELPPPIP AGRP+L ELGL D +  WL      PL  LNGSRATRMGHYHERLWHTLLDHAPNTRLLA NVRITRKRNTLGELD++YRTRDNPAPVHLEVAIKFYLGLPEGPGA NSQSRWIGPGGLDSLALKCAHL RHQLPLSTT PALE LAHWLAPRD+G S+  L EQLTQRLAMPGVLYYPWHA M APEGA A+HRRG WC+LSDWP L A  +   +VA LEKPHWLAPP  +AFRPA E LPA++D+V   RSPQQ+MLY A ++ YERLF+VP+DWPRQVP+PPRV
Sbjct:   41 LRDLAWLIATPDLVELPPPIPAAGRPTLKELGLQDALLPWLLQLGQPPLATLNGSRATRMGHYHERLWHTLLDHAPNTRLLARNVRITRKRNTLGELDMLYRTRDNPAPVHLEVAIKFYLGLPEGPGAPNSQSRWIGPGGLDSLALKCAHLRRHQLPLSTTAPALETLAHWLAPRDIGASERSLAEQLTQRLAMPGVLYYPWHAAMPAPEGALAEHRRGTWCYLSDWPALAAERSGALQVAWLEKPHWLAPPPRSAFRPAAEQLPAVIDQVHAWRSPQQMMLYCAEKEHYERLFIVPDDWPRQVPLPPRV 350          
BLAST of mRNA_E-siliculosus-1a_F_contig11992.1260.1 vs. uniprot
Match: A0A265E051_9GAMM (Uncharacterized protein n=2 Tax=Halomonas boliviensis LC1 TaxID=1072583 RepID=A0A265E051_9GAMM)

HSP 1 Score: 503 bits (1296), Expect = 2.240e-177
Identity = 243/309 (78.64%), Postives = 262/309 (84.79%), Query Frame = 1
Query:   58 AVRDLAWLIATPDLIELPPPIPRAGRPSLAELGLTDNVENWLTTQAAAPLGPLNGSRATRMGHYHERLWHTLLDHAPNTRLLAHNVRITRKRNTLGELDIVYRTRDNPAPVHLEVAIKFYLGLPEGPGAANSQSRWIGPGGLDSLALKCAHLHRHQLPLSTTLPALEALAHWLAPRDLGVSDTRLGEQLTQRLAMPGVLYYPWHAEMLAPEGATADHRRGRWCFLSDWPELLARFTDMPRVARLEKPHWLAPPQLNAFRPAMEVLPAIMDRVQTRRSPQQVMLYYANEKRYERLFLVPNDWPRQVPIPP 984
            A+RDLAWL+ATPDL+ELPPPIP  GRP+L ELGL   +  WL       L  LNGSRATRMGHYHERLWHTLLDHAPNTRLLA NVRITRKRNTLGELD++YRTRDNPAPVHLEVAIKFYLGLPEGPGAANSQSRWIGPGGLDSLALKC+HL RHQLPLSTT  ALE LAHWL PRDLGVS   L EQLTQRLAMPGVLYYPWHAEM APEGATADHRRG WC+L DWP+L+A    +P++  LEKPHWLA P L+ FRPA E+LPAI+DRVQ  RSPQQVMLY   E+ YERLFLVPNDWP QVP+PP
Sbjct:   33 ALRDLAWLVATPDLVELPPPIPCGGRPTLKELGLESALLPWLRQLGRPQLAALNGSRATRMGHYHERLWHTLLDHAPNTRLLAQNVRITRKRNTLGELDMLYRTRDNPAPVHLEVAIKFYLGLPEGPGAANSQSRWIGPGGLDSLALKCSHLRRHQLPLSTTATALETLAHWLTPRDLGVSKASLSEQLTQRLAMPGVLYYPWHAEMPAPEGATADHRRGTWCYLRDWPKLVASLPVIPKMVWLEKPHWLATPPLSVFRPAEELLPAIIDRVQAWRSPQQVMLYCPEEEHYERLFLVPNDWPHQVPLPP 341          
BLAST of mRNA_E-siliculosus-1a_F_contig11992.1260.1 vs. uniprot
Match: A0A0D6EEQ5_9GAMM (Uncharacterized protein n=3 Tax=Halomonas TaxID=2745 RepID=A0A0D6EEQ5_9GAMM)

HSP 1 Score: 501 bits (1290), Expect = 1.370e-176
Identity = 244/316 (77.22%), Postives = 268/316 (84.81%), Query Frame = 1
Query:   58 AVRDLAWLIATPDLIELPPPIPRAGRPSLAELGLTDNVENWLTTQAAAPLGPLNGSRATRMGHYHERLWHTLLDHAPNTRLLAHNVRITRKRNTLGELDIVYRTRDNPAPVHLEVAIKFYLGLPEGPGAANSQSRWIGPGGLDSLALKCAHLHRHQLPLSTTLPALEALAHWLAPRDLGVSDTRLGEQLTQRLAMPGVLYYPWHAEMLAPEGATADHRRGRWCFLSDWPELLARFTDMPRVARLEKPHWLAPPQLNAFRPAMEVLPAIMDRVQTRRSPQQVMLYYA----NEKRYERLFLVPNDWPRQVPIPPRVR 993
            A+RDLAWL+A PDL+ELPPPIP AGRP+L ELGL   +  WL  +   PL  LNGSRATRMGHYHERLWHTLLDHAPNTRLLA NVRITRKRNTLGELD++YRTR+ PAPVHLEVAIKFYLGLPEGPGA  SQSRWIGPGGLDSLALKC HL RHQLPLS TLPALE LAHWL PRDLGVS   L EQLTQRLA+PGVLYYPWHAEM APEGATADHRRG WC+L DWPE+ A    +PR+  LEKPHWLAPP  +AFRPA EVLP+I+DRV T RSPQQVML+Y+    +++RYERLFLVP+DWPRQVP+PPR R
Sbjct:   21 ALRDLAWLVAXPDLVELPPPIPCAGRPTLQELGLEHTLLPWL--RQLQPLAALNGSRATRMGHYHERLWHTLLDHAPNTRLLASNVRITRKRNTLGELDMLYRTREKPAPVHLEVAIKFYLGLPEGPGAPXSQSRWIGPGGLDSLALKCTHLQRHQLPLSNTLPALETLAHWLTPRDLGVSSVSLSEQLTQRLAIPGVLYYPWHAEMPAPEGATADHRRGTWCYLRDWPEMAASLPAIPRMVWLEKPHWLAPPPRSAFRPAAEVLPSIIDRVTTWRSPQQVMLWYSESEHDDQRYERLFLVPDDWPRQVPLPPRAR 334          
BLAST of mRNA_E-siliculosus-1a_F_contig11992.1260.1 vs. uniprot
Match: A0A0D5M804_9GAMM (Uncharacterized protein n=8 Tax=Halomonas TaxID=2745 RepID=A0A0D5M804_9GAMM)

HSP 1 Score: 498 bits (1283), Expect = 1.330e-175
Identity = 241/319 (75.55%), Postives = 263/319 (82.45%), Query Frame = 1
Query:   37 HEALAHVAVRDLAWLIATPDLIELPPPIPRAGRPSLAELGLTDNVENWLTTQAAAPLGPLNGSRATRMGHYHERLWHTLLDHAPNTRLLAHNVRITRKRNTLGELDIVYRTRDNPAPVHLEVAIKFYLGLPEGPGAANSQSRWIGPGGLDSLALKCAHLHRHQLPLSTTLPALEALAHWLAPRDLGVSDTRLGEQLTQRLAMPGVLYYPWHAEMLAPEGATADHRRGRWCFLSDWPELLARFTDMPRVARLEKPHWLAPPQLNAFRPAMEVLPAIMDRVQTRRSPQQVMLYYANEKRYERLFLVPNDWPRQVPIPPRVR 993
            +E L    +RDLAWL+ T DL+ELPPPIP  GRP++ ELGL   +  WL       L  LNGSRATRMGHYHERLWHTLLDHAPNTRLLA NVRITR+RNTLGELD++YRTRDNPAPVHLEVAIKFYLGLPEGPGAA SQSRWIGPGGLDSLALKC HL RHQLPLSTT PALE LAHWLAPRD+GVS   LGEQLTQRLAMPGVLYYPWHA M APEGATADHRRG WC+L DWP L A  T+ P +A L KPHWLAPP  +AFRP  E LPAI ++V T RSPQQVMLYY  ++RYERLFLVP++WPRQVP+PP VR
Sbjct:   12 NEELGSTVLRDLAWLVTTHDLVELPPPIPCGGRPTIKELGLEQALLPWLRQLGRPSLIALNGSRATRMGHYHERLWHTLLDHAPNTRLLARNVRITRQRNTLGELDMLYRTRDNPAPVHLEVAIKFYLGLPEGPGAATSQSRWIGPGGLDSLALKCGHLRRHQLPLSTTAPALETLAHWLAPRDIGVSSKELGEQLTQRLAMPGVLYYPWHAAMPAPEGATADHRRGTWCYLRDWPALAASVTERPEMAWLAKPHWLAPPLHSAFRPMAEQLPAIFEKVHTWRSPQQVMLYYPQQQRYERLFLVPDNWPRQVPLPPVVR 330          
BLAST of mRNA_E-siliculosus-1a_F_contig11992.1260.1 vs. uniprot
Match: A0A651DCS4_HALSX (DUF1853 family protein n=1 Tax=Halomonas sp. TaxID=1486246 RepID=A0A651DCS4_HALSX)

HSP 1 Score: 496 bits (1277), Expect = 1.170e-174
Identity = 246/329 (74.77%), Postives = 268/329 (81.46%), Query Frame = 1
Query:    7 GYTEGYVEGVHEALAHVAVRDLAWLIATPDLIELPPPIPRAGRPSLAELGLTDNVENWLTTQAAAPLGPLNGSRATRMGHYHERLWHTLLDHAPNTRLLAHNVRITRKRNTLGELDIVYRTRDNPAPVHLEVAIKFYLGLPEGPGAANSQSRWIGPGGLDSLALKCAHLHRHQLPLSTTLPALEALAHWLAPRDLGVSDTRLGEQLTQRLAMPGVLYYPWHAEMLAPEGATADHRRGRWCFLSDWPELLARFTDMPRVARLEKPHWLAPPQLNAFRPAMEVLPAIMDRVQTRRSPQQVMLYYANEKRYERLFLVPNDWPRQVPIPPRVR 993
            G T+  VE V EAL HVAVRDLAWLIATPDLIEL PPIPRAGRPSL ELGLT  +  WL  Q +  L  LNGSRATRMGHYHERLWHTLLDHAPNTRLLA NVRITR+R TLGELD++YRTRDNPAPVHLEVAIKFYLGLPEGPGAA+SQSRWIGPGGLDSLALKCAHL  HQLPLSTT  ALE L HWL PRD GVS   L EQLTQRLAMPGVLYYPWHAEM APEGAT +HRRG WC+L DWP L A  ++   +A LEKPHWLAPP  +AF P  E+LPAI++++   RSPQQVMLY    + YERLF+VP+DWPRQVP+ P  R
Sbjct:    4 GSTQVDVEDVCEALGHVAVRDLAWLIATPDLIELAPPIPRAGRPSLEELGLTHQLGQWLNAQLSTSLNALNGSRATRMGHYHERLWHTLLDHAPNTRLLARNVRITRQRITLGELDMLYRTRDNPAPVHLEVAIKFYLGLPEGPGAADSQSRWIGPGGLDSLALKCAHLKHHQLPLSTTPHALETLTHWLTPRDTGVSAVALREQLTQRLAMPGVLYYPWHAEMPAPEGATPNHRRGIWCYLRDWPALAAERSETLNIAWLEKPHWLAPPTRDAFHPVAELLPAIIEKLYAWRSPQQVMLYDPERECYERLFVVPDDWPRQVPLVPVAR 332          
BLAST of mRNA_E-siliculosus-1a_F_contig11992.1260.1 vs. uniprot
Match: UPI001F0DAD97 (DUF1853 family protein n=1 Tax=Halomonas neptunia TaxID=115551 RepID=UPI001F0DAD97)

HSP 1 Score: 492 bits (1267), Expect = 6.690e-173
Identity = 239/320 (74.69%), Postives = 264/320 (82.50%), Query Frame = 1
Query:   46 LAHVAVRDLAWLIATPDLIELPPPIPRAGRPSLAELGLTDNVENWLTTQAAAPLGPLNGSRATRMGHYHERLWHTLLDHAPNTRLLAHNVRITRKRNTLGELDIVYRTRDNPAPVHLEVAIKFYLGLPEGPGAANSQSRWIGPGGLDSLALKCAHLHRHQLPLSTTLPALEALAHWLAPRDLGVSDTRLGEQLTQRLAMPGVLYYPWHAEMLAPEGATADHRRGRWCFLSDWPELLARFTDMPRVARLEKPHWLAPPQLNAFRPAMEVLPAIMDRVQTRRSPQQVMLYYA----NEKRYERLFLVPNDWPRQVPIPPRVR 993
            L+   +RD+AWL  TPDL++LPPPIP AGRP+L ELGL   + +WL      PL  LNGSRA RMGHYHERLWHTLLDHAPNTRLLA NVRI+RKR TLGELD++YRTR NPAPVHLEVAIKFYLGLPEGPGA  SQSRWIGPGGLDSLALKCAHL RHQLPLSTT PALE LAHWLAPRDLGVS T  GEQL QRLAMPGVLYYPWHA M APEGAT DHRRG WC+L DWPE+ ARF+ MPR+  LEKPHWL+PP  +AFRPA EVLP I+ +V   RSPQQVML Y+    +E+RYERLFLVP++WPRQVP+PP  R
Sbjct:   28 LSDPVLRDIAWLAVTPDLVKLPPPIPCAGRPTLEELGLEHTLLSWLRQLGRPPLNTLNGSRAMRMGHYHERLWHTLLDHAPNTRLLARNVRISRKRTTLGELDMLYRTRGNPAPVHLEVAIKFYLGLPEGPGAPTSQSRWIGPGGLDSLALKCAHLRRHQLPLSTTPPALETLAHWLAPRDLGVSGTGFGEQLMQRLAMPGVLYYPWHATMPAPEGATTDHRRGTWCYLRDWPEMAARFSAMPRMVWLEKPHWLSPPPHSAFRPAEEVLPVIIQQVHAWRSPQQVMLCYSAKGHDEQRYERLFLVPDEWPRQVPLPPAAR 347          
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig11992.1260.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
L9U9C5_9GAMM1.200e-18275.75Uncharacterized protein n=17 Tax=Halomonadaceae Ta... [more]
A0A246RV39_9GAMM5.320e-18076.71Uncharacterized protein n=5 Tax=Halomonas TaxID=27... [more]
A0A1J8PCT5_9GAMM7.280e-18077.12Uncharacterized protein n=1 Tax=Halomonas sp. QHL1... [more]
A0A1A9R407_9GAMM7.190e-17877.53Uncharacterized protein n=3 Tax=unclassified Halom... [more]
A0A101D478_9GAMM7.620e-17878.39Uncharacterized protein n=1 Tax=Halomonas sp. 54_1... [more]
A0A265E051_9GAMM2.240e-17778.64Uncharacterized protein n=2 Tax=Halomonas bolivien... [more]
A0A0D6EEQ5_9GAMM1.370e-17677.22Uncharacterized protein n=3 Tax=Halomonas TaxID=27... [more]
A0A0D5M804_9GAMM1.330e-17575.55Uncharacterized protein n=8 Tax=Halomonas TaxID=27... [more]
A0A651DCS4_HALSX1.170e-17474.77DUF1853 family protein n=1 Tax=Halomonas sp. TaxID... [more]
UPI001F0DAD976.690e-17374.69DUF1853 family protein n=1 Tax=Halomonas neptunia ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_F_contig11992contigE-siliculosus-1a_F_contig11992:33..1031 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef902022-09-19
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female2021-02-24
Properties
Property NameValue
Start1
Stop1
Cds size999
Model size999
Exons1
Hectar predicted targeting categoryother localisation
BRITEko00000
Best eggNOG OGNA|NA|NA
Best tax levelOceanospirillales
COG Functional cat.S
EggNOG OGs1MZ3U@1224,1S9NQ@1236,1XM2Q@135619,COG3782@1,COG3782@2
EggNOG free text desc.Domain of unknown function (DUF1853)
KEGG koko:K09977
Seed eggNOG ortholog1380358.JADJ01000015_gene2405
Seed ortholog evalue1.1e-146
Seed ortholog score526.2
Taxonomic scopeBacteria
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927716.7089648-CDS-E-siliculosus-1a_F_contig11992:32..10311622927716.7089648-CDS-E-siliculosus-1a_F_contig11992:32..1031Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig11992 33..1031 +
1696318651.672076-CDS-E-siliculosus-1a_F_contig11992:32..10311696318651.672076-CDS-E-siliculosus-1a_F_contig11992:32..1031Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig11992 33..1031 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_F_contig11992.1260.1prot_E-siliculosus-1a_F_contig11992.1260.1Ectocarpus siliculosus Ec863f_EcPH12_90f femalepolypeptideE-siliculosus-1a_F_contig11992 33..1031 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E-siliculosus-1a_F_contig11992.1260.1

>prot_E-siliculosus-1a_F_contig11992.1260.1 ID=prot_E-siliculosus-1a_F_contig11992.1260.1|Name=mRNA_E-siliculosus-1a_F_contig11992.1260.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=333bp
MPGYTEGYVEGVHEALAHVAVRDLAWLIATPDLIELPPPIPRAGRPSLAE
LGLTDNVENWLTTQAAAPLGPLNGSRATRMGHYHERLWHTLLDHAPNTRL
LAHNVRITRKRNTLGELDIVYRTRDNPAPVHLEVAIKFYLGLPEGPGAAN
SQSRWIGPGGLDSLALKCAHLHRHQLPLSTTLPALEALAHWLAPRDLGVS
DTRLGEQLTQRLAMPGVLYYPWHAEMLAPEGATADHRRGRWCFLSDWPEL
LARFTDMPRVARLEKPHWLAPPQLNAFRPAMEVLPAIMDRVQTRRSPQQV
MLYYANEKRYERLFLVPNDWPRQVPIPPRVRD*
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mRNA from alignment at E-siliculosus-1a_F_contig11992:33..1031+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E-siliculosus-1a_F_contig11992.1260.1 ID=mRNA_E-siliculosus-1a_F_contig11992.1260.1|Name=mRNA_E-siliculosus-1a_F_contig11992.1260.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=999bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig11992:33..1031+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
ATGCCTGGCTATACGGAGGGCTACGTAGAGGGCGTACATGAAGCACTTGC TCACGTTGCCGTTCGCGACCTTGCTTGGCTGATAGCCACACCAGACCTTA TTGAACTGCCGCCTCCGATTCCGCGCGCGGGGCGCCCCAGCCTTGCGGAA CTAGGGCTAACCGACAATGTTGAAAATTGGCTAACTACACAAGCAGCGGC GCCGCTAGGCCCGCTAAACGGCAGCCGAGCGACGCGCATGGGTCATTACC ACGAACGCCTGTGGCATACGCTATTGGATCACGCGCCGAATACACGGCTA CTAGCCCATAACGTGCGGATCACCCGCAAGCGTAACACCTTGGGCGAGCT GGATATTGTCTATCGCACCCGCGACAATCCTGCCCCAGTGCATTTGGAAG TAGCGATAAAGTTCTATCTTGGGCTTCCTGAAGGGCCTGGCGCGGCTAAC AGTCAGAGTCGCTGGATTGGCCCTGGCGGGCTGGATAGCCTGGCGCTTAA GTGCGCTCACCTTCACCGTCATCAACTACCCCTTTCCACCACGTTACCCG CGCTGGAGGCCCTCGCCCACTGGCTCGCGCCACGAGACCTTGGCGTTTCT GATACACGTTTAGGTGAGCAGCTAACGCAGCGACTGGCGATGCCGGGCGT GCTGTATTACCCCTGGCACGCTGAGATGCTCGCGCCGGAAGGCGCGACAG CCGACCATCGGCGGGGAAGGTGGTGCTTTTTAAGCGATTGGCCTGAGCTG TTGGCTCGCTTTACTGACATGCCCAGGGTTGCACGGCTGGAAAAACCCCA TTGGTTAGCGCCACCACAGCTTAATGCTTTTCGCCCCGCAATGGAGGTGC TGCCTGCCATTATGGATAGAGTGCAAACGCGGCGCTCACCGCAGCAAGTC ATGCTTTATTACGCCAATGAGAAACGCTATGAGCGGCTGTTTCTAGTGCC CAATGACTGGCCGCGTCAAGTGCCCATACCGCCCCGCGTTAGGGATTAA
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Coding sequence (CDS) from alignment at E-siliculosus-1a_F_contig11992:33..1031+

>mRNA_E-siliculosus-1a_F_contig11992.1260.1 ID=mRNA_E-siliculosus-1a_F_contig11992.1260.1|Name=mRNA_E-siliculosus-1a_F_contig11992.1260.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=1998bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig11992:33..1031+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
ATGCCTGGCTATACGGAGGGCTACGTAGAGGGCGTACATGAAGCACTTGC
TCACGTTGCCGTTCGCGACCTTGCTTGGCTGATAGCCACACCAGACCTTA
TTGAACTGCCGCCTCCGATTCCGCGCGCGGGGCGCCCCAGCCTTGCGGAA
CTAGGGCTAACCGACAATGTTGAAAATTGGCTAACTACACAAGCAGCGGC
GCCGCTAGGCCCGCTAAACGGCAGCCGAGCGACGCGCATGGGTCATTACC
ACGAACGCCTGTGGCATACGCTATTGGATCACGCGCCGAATACACGGCTA
CTAGCCCATAACGTGCGGATCACCCGCAAGCGTAACACCTTGGGCGAGCT
GGATATTGTCTATCGCACCCGCGACAATCCTGCCCCAGTGCATTTGGAAG
TAGCGATAAAGTTCTATCTTGGGCTTCCTGAAGGGCCTGGCGCGGCTAAC
AGTCAGAGTCGCTGGATTGGCCCTGGCGGGCTGGATAGCCTGGCGCTTAA
GTGCGCTCACCTTCACCGTCATCAACTACCCCTTTCCACCACGTTACCCG
CGCTGGAGGCCCTCGCCCACTGGCTCGCGCCACGAGACCTTGGCGTTTCT
GATACACGTTTAGGTGAGCAGCTAACGCAGCGACTGGCGATGCCGGGCGT
GCTGTATTACCCCTGGCACGCTGAGATGCTCGCGCCGGAAGGCGCGACAG
CCGACCATCGGCGGGGAAGGTGGTGCTTTTTAAGCGATTGGCCTGAGCTG
TTGGCTCGCTTTACTGACATGCCCAGGGTTGCACGGCTGGAAAAACCCCA
TTGGTTAGCGCCACCACAGCTTAATGCTTTTCGCCCCGCAATGGAGGTGC
TGCCTGCCATTATGGATAGAGTGCAAACGCGGCGCTCACCGCAGCAAGTC
ATGCTTTATTACGCCAATGAGAAACGCTATGAGCGGCTGTTTCTAGTGCC
CAATGACTGGCCGCGTCAAGTGCCCATACCGCCCCGCGTTAGGGATTAAA
TGCCTGGCTATACGGAGGGCTACGTAGAGGGCGTACATGAAGCACTTGCT
CACGTTGCCGTTCGCGACCTTGCTTGGCTGATAGCCACACCAGACCTTAT
TGAACTGCCGCCTCCGATTCCGCGCGCGGGGCGCCCCAGCCTTGCGGAAC
TAGGGCTAACCGACAATGTTGAAAATTGGCTAACTACACAAGCAGCGGCG
CCGCTAGGCCCGCTAAACGGCAGCCGAGCGACGCGCATGGGTCATTACCA
CGAACGCCTGTGGCATACGCTATTGGATCACGCGCCGAATACACGGCTAC
TAGCCCATAACGTGCGGATCACCCGCAAGCGTAACACCTTGGGCGAGCTG
GATATTGTCTATCGCACCCGCGACAATCCTGCCCCAGTGCATTTGGAAGT
AGCGATAAAGTTCTATCTTGGGCTTCCTGAAGGGCCTGGCGCGGCTAACA
GTCAGAGTCGCTGGATTGGCCCTGGCGGGCTGGATAGCCTGGCGCTTAAG
TGCGCTCACCTTCACCGTCATCAACTACCCCTTTCCACCACGTTACCCGC
GCTGGAGGCCCTCGCCCACTGGCTCGCGCCACGAGACCTTGGCGTTTCTG
ATACACGTTTAGGTGAGCAGCTAACGCAGCGACTGGCGATGCCGGGCGTG
CTGTATTACCCCTGGCACGCTGAGATGCTCGCGCCGGAAGGCGCGACAGC
CGACCATCGGCGGGGAAGGTGGTGCTTTTTAAGCGATTGGCCTGAGCTGT
TGGCTCGCTTTACTGACATGCCCAGGGTTGCACGGCTGGAAAAACCCCAT
TGGTTAGCGCCACCACAGCTTAATGCTTTTCGCCCCGCAATGGAGGTGCT
GCCTGCCATTATGGATAGAGTGCAAACGCGGCGCTCACCGCAGCAAGTCA
TGCTTTATTACGCCAATGAGAAACGCTATGAGCGGCTGTTTCTAGTGCCC
AATGACTGGCCGCGTCAAGTGCCCATACCGCCCCGCGTTAGGGATTAA
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