mRNA_E-siliculosus-1a_F_contig1199.1255.1 (mRNA) Ectocarpus siliculosus Ec863f_EcPH12_90f female
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Overview
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig1199.1255.1 vs. uniprot
Match: A0A6H5KQJ0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQJ0_9PHAE) HSP 1 Score: 1009 bits (2609), Expect = 0.000e+0 Identity = 588/718 (81.89%), Postives = 613/718 (85.38%), Query Frame = 1
Query: 1 MLVARNHVHSKAPVIGEALQAAIANVRSDTAREDWLLCGFDGGEDIRLIGTGVGGIEALKASIVKLDVCYGLVRCSNTLEQAGYVQTSFVKFVWVYWRPDNNIPVMRKMKIGVNEGEMKSLFAPYHAELQACALHELGEQPLADVLDTVTMRADRTKTRKLERSPSSPSLLARGRAAWKLARSSLPSMHFARLAIADEQKKVAASTDVEFEEPEAFGRAVKDVRSDMSFADWCLLGYKNETVLRMVGTGNGGLQCLLDAAEPYGVNYGLLRVSEKFDGVFHEAYCFISWIPENIPAFVKARVSTHQVLLPSPTAT----------------------------------PPPPAAVDAAKAAPTLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNDDG-------------DSSGTDDNLLVSPASDGADAGDSVMRPVYVAAKTRTNSLGNSIVIKADALKKAKSPSEEEKSNFPRMFLNSLISKGSGDDKNIGTSGSGGSXXXXXXSRFGSTGGAKAGGEGEANTIDLVAKSKSRDSPQQQRTTQAATAPSVLTSVQEAVRRVRNGGDGADFLVVEWKRGGTTTAGVPQQEQFQIKECGVGGVQALADCLEENSVMYGLVRVTETFQGTKDSAGGNXXXXXXX----------STEKFCCIKWTPDDGPADQRTSELQGEVSRLFHPYHGDLTAKHAGDVTPEAVSSRVSRRLKQ 1983
MLVARNHVHSKAPVIGEALQAAIANVRSDTAREDW+LCGFDGGEDIRLIGTGVGG+EALKASIVK DVCYGLVRCS+TLEQAGYVQT FVKFVWVYWRPDN IPVMRKMKIGVNEGEMKSLFAPYHAELQACALHELGEQ LADVLD+VTMRADRTKTRKLERSPSSPSLLARGRAAWKLARSSL SMHFA LAIADEQKKVAAST+VEFEEPE F RAVKDVRSD+SFADWCLLGYKNETVLRMVGTG GGLQCLLDAAEPYGVNYGLLRVSEKFDGVFHEAYCFISWIPENIPAFVKARVSTHQ + + PP A+ + +A+P XXXXXXXXXXXXXXXXXXXXXXXXXXXXXX DSSGTDDNLLVSPASDGADAGDS MRPVYVAAKTRTNSL NSIVIKADALK AKSP+EEEKSNFPRMFLNSLISKGSGDDKNIGTSGSGGS XXXXX RFG KAGGEGEAN++ + A+ KSRDSP+QQRTTQAATAPSVLT+VQEAVRRVRNGGDGADFLVVEW+RGGTT GVPQQEQ +IKECGVGGVQALADCLE+NSVMYGLVR+TETF GTKDSAGG+XXXXXXX ST+KFCCIKW PDDGPADQRTSELQGEVSRLFHPYHGDLTAKHAGDVT E SSRVSRRLKQ
Sbjct: 1 MLVARNHVHSKAPVIGEALQAAIANVRSDTAREDWVLCGFDGGEDIRLIGTGVGGVEALKASIVKWDVCYGLVRCSHTLEQAGYVQTGFVKFVWVYWRPDN-IPVMRKMKIGVNEGEMKSLFAPYHAELQACALHELGEQSLADVLDSVTMRADRTKTRKLERSPSSPSLLARGRAAWKLARSSLSSMHFAHLAIADEQKKVAASTNVEFEEPEVFARAVKDVRSDLSFADWCLLGYKNETVLRMVGTGKGGLQCLLDAAEPYGVNYGLLRVSEKFDGVFHEAYCFISWIPENIPAFVKARVSTHQGAIATAFRKHVHCQFYFRASERSDVTMDVIRNRVRQIIGKGDYPPRRLAIASTEASPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDSSGTDDNLLVSPASDGADAGDSAMRPVYVAAKTRTNSLRNSIVIKADALKMAKSPTEEEKSNFPRMFLNSLISKGSGDDKNIGTSGSGGSGXXXXXXRFGXXXXXKAGGEGEANSMGVAAEPKSRDSPRQQRTTQAATAPSVLTTVQEAVRRVRNGGDGADFLVVEWRRGGTTATGVPQQEQLEIKECGVGGVQALADCLEQNSVMYGLVRLTETFHGTKDSAGGSXXXXXXXXXXXXXXXSRSTKKFCCIKWAPDDGPADQRTSELQGEVSRLFHPYHGDLTAKHAGDVTTETASSRVSRRLKQ 717
BLAST of mRNA_E-siliculosus-1a_F_contig1199.1255.1 vs. uniprot
Match: D8LSR6_ECTSI (Actin binding protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LSR6_ECTSI) HSP 1 Score: 558 bits (1438), Expect = 5.030e-193 Identity = 282/306 (92.16%), Postives = 291/306 (95.10%), Query Frame = 1
Query: 1 MLVARNHVHSKAPVIGEALQAAIANVRSDTAREDWLLCGFDGGEDIRLIGTGVGGIEALKASIVKLDVCYGLVRCSNTLEQAGYVQTSFVKFVWVYWRPDNNIPVMRKMKIGVNEGEMKSLFAPYHAELQACALHELGEQPLADVLDTVTMRADRTKTRKLERSPSSPSLLARGRAAWKLARSSLPSMHFARLAIADEQKKVAASTDVEFEEPEAFGRAVKDVRSDMSFADWCLLGYKNETVLRMVGTGNGGLQCLLDAAEPYGVNYGLLRVSEKFDGVFHEAYCFISWIPENIPAFVKARVSTHQ 918
MLVARNHVH KAPVIGEALQAAIANVRSDTAREDW+LCGFDGG DIRL GTGVGG+EALKASIV+ DVCYGLVRCS TLEQAG VQT FVKFVWVYWRPDN IPV+RKMKIGVNEGEMKS+FAPYHAELQACALHELGEQPLADVLD+VTMRADRTKTRKLER PSSPSLLARGRAAWKLARS+LPSM FA LA ADEQKKVAAS +VEFEEP+AFGRAVKDVRSDMSFADWCLLGYKNETVLRMVGTG GGLQCLLDAAEP GVNYGLLRVSEKFDGVFHEAYCFISWIPENIPAFVKARVSTHQ
Sbjct: 1 MLVARNHVHRKAPVIGEALQAAIANVRSDTAREDWVLCGFDGGGDIRLFGTGVGGVEALKASIVEWDVCYGLVRCSYTLEQAGDVQTGFVKFVWVYWRPDN-IPVIRKMKIGVNEGEMKSVFAPYHAELQACALHELGEQPLADVLDSVTMRADRTKTRKLERPPSSPSLLARGRAAWKLARSALPSMPFAHLATADEQKKVAASANVEFEEPKAFGRAVKDVRSDMSFADWCLLGYKNETVLRMVGTGKGGLQCLLDAAEPSGVNYGLLRVSEKFDGVFHEAYCFISWIPENIPAFVKARVSTHQ 305
BLAST of mRNA_E-siliculosus-1a_F_contig1199.1255.1 vs. uniprot
Match: D8LSR5_ECTSI (ADF-H domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LSR5_ECTSI) HSP 1 Score: 158 bits (400), Expect = 8.720e-43 Identity = 76/90 (84.44%), Postives = 79/90 (87.78%), Query Frame = 1
Query: 1714 MYGLVRVTETFQGTKDSAGGNXXXXXXXSTEKFCCIKWTPDDGPADQRTSELQGEVSRLFHPYHGDLTAKHAGDVTPEAVSSRVSRRLKQ 1983
MYG VRVTET QGTKDSAGG+ STEKFCCIKW PDDGPA+QRTSELQGEVSRLFHPYHGDLTAKHAGDVT EAVS+RVSRRLKQ
Sbjct: 1 MYGFVRVTETSQGTKDSAGGSG------STEKFCCIKWAPDDGPAEQRTSELQGEVSRLFHPYHGDLTAKHAGDVTTEAVSARVSRRLKQ 84
BLAST of mRNA_E-siliculosus-1a_F_contig1199.1255.1 vs. uniprot
Match: A0A8J4PWL5_9MYCE (Uncharacterized protein n=1 Tax=Polysphondylium violaceum TaxID=133409 RepID=A0A8J4PWL5_9MYCE) HSP 1 Score: 129 bits (323), Expect = 4.890e-28 Identity = 81/290 (27.93%), Postives = 148/290 (51.03%), Query Frame = 1
Query: 52 ALQAAIANVRSDTAREDWLLCGFDGGED--IRLIGTGVGGIEALKASIVKLDVCYGLVRCSNTLEQAGYVQTSFVKFVWVYWRPDNNIPVMRKMKIGVNEGEMKSLFAPYHAELQACALHELGEQPLADVLDTVTMRADRTKTRKLERSPSSPSLLARGRAAWKLARSSLPSMHFARLAIADEQKKVAASTDVEFEEPEAFGRAVKDVRSDMSFADWCLLGYKNETVLRMVGTGNGGLQCLLDAAEPYGVNYGLLRVSEKFDGVFHEAYCFISWIPENIPAFVKARVSTH 915
A++ A+ RSD + +W+L G++GG I L+G G G + L A++ V YGLVR ++ + V KF ++ W +N IP M + ++ + G +K L +PYH +++ E+ E+ + + + A++ + P++ + +K S++P+ ++ + + +++ +A A+KDVRSD S +W L+GYKN+T L ++G+GNGG L V YGL+R E+FD + F+ ++ E+I +A++ TH
Sbjct: 183 AIREALKEFRSDNSDVNWVLFGYEGGNSNTIVLLGKGTNGTDELVANLTDEIVAYGLVRIVEKIDNSNTV-----KFAFINWTGEN-IPRMLRARLSTHSGTVKDLVSPYHVDIKCSTKSEISEEIVVKEVANFSGTANKVLEGQSNNRPAASFAKSPVTGGFK-GPSAVPT---------------SSGSSIGYDDEQAIKNAIKDVRSDSSDTNWALVGYKNDTTLTLLGSGNGGADELAQHLNSKIVAYGLVREVERFDLSDTVKFAFVKFVGEDIARMFRAKLGTH 450
BLAST of mRNA_E-siliculosus-1a_F_contig1199.1255.1 vs. uniprot
Match: A0A152A8W2_9MYCE (Putative actin binding protein n=1 Tax=Tieghemostelium lacteum TaxID=361077 RepID=A0A152A8W2_9MYCE) HSP 1 Score: 127 bits (320), Expect = 1.360e-27 Identity = 88/291 (30.24%), Postives = 147/291 (50.52%), Query Frame = 1
Query: 55 LQAAIANVRSDTAREDWLLCGFDGGE--DIRLIGTGVGGIEALKASIVKLDVCYGLVRCSNTLEQAGYVQTSFVKFVWVYWRPDNNIPVMRKMKIGVNEGEMKSLFAPYHAELQACALHELGEQPLADVLDTVTMRADRTKTRKLE--RSPSSPSLLARGRAAWKLARSSLPSMHFARLAIADEQKKVAASTDVEFEEPEAFGRAVKDVRSDMSFADWCLLGYKNETVLRMVGTGNGGLQCLLDAAEPYGVNYGLLRVSEKFDGVFHEAYCFISWIPENIPAFVKARVSTH 915
++ A+ RSD + +W+L G++GG +I L+G G G + L +++ V YGLVR ++ + V+ +F+ +V NIP M + ++G + G +K L PYH +++ E+ E V+DT++ R+ TK L SPSS S + G S + ++ + + E A+KDVR+D + +WCL+GYKN+ L ++G+GNGG L+ + V YGL+R EK D + FI ++ E IP ++A++ TH
Sbjct: 192 IREALKEFRSDASDVNWVLFGYEGGNSNNIVLLGKGTQGTQELISNLTPEIVGYGLVRIVEKIDNSNTVKFAFINWV------GENIPRMLRARLGTHIGTIKELVQPYHVDIKCSVPSEISEDI---VVDTIS-RSSGTKLNVLAGTSSPSSSSPSSGG--------SYRGTXXXXXXGYKPSSVPTSSGSVINIENEAEVKAAIKDVRADSTDTNWCLVGYKNDNTLTLLGSGNGGTDELVSHLKSNIVGYGLVREVEKIDLSETIKFAFIDFVGEEIPRMLRAKLGTH 464
BLAST of mRNA_E-siliculosus-1a_F_contig1199.1255.1 vs. uniprot
Match: Q75JY8_DICDI (Uncharacterized protein n=1 Tax=Dictyostelium discoideum TaxID=44689 RepID=Q75JY8_DICDI) HSP 1 Score: 114 bits (285), Expect = 4.520e-23 Identity = 87/303 (28.71%), Postives = 147/303 (48.51%), Query Frame = 1
Query: 52 ALQAAIANVRSDTAREDWLLCGFDGGED--IRLIGTGVGGIEALKASIVKLDVCYGLVRCSNTLEQAGYVQTSFVKFVWVYWRPDNNIPVMRKMKIGVNEGEMKSLFAPYHAELQACALHELGEQPLADVLDTVTMRA-----DRTKTR----KLERSPSSPSLLARGRAAWKLARSSLPSMHFA----RLAIADEQKKVAASTDVEFEEPEAFGRAVKDVRSDMSFADWCLLGYKNETVLRMVGTGNGGLQCLLDAAEPYGVNYGLLRVSEKFDGVFHEAYCFISWIPENIPAFVKARVSTH 915
A++ A+ RSD DW+L G++GG I L+G G GG+ L +++ V YGLVR ++ + + KF ++ W + IP M + ++G + G + L PYH +++ E+ + + +A D ++R ++ S SS S +G S+ FA + K + ST + F++ + +KDVRSD + +WCL+GYKN+T L ++ GNGG+ L+ V YGL+R E+FD + FI ++ E+I +A++ TH
Sbjct: 191 AIREALKEFRSDENDIDWVLFGYEGGNSNTIILLGKGNGGVNELISNLQDNLVGYGLVRIVEKIDNSDTI-----KFAYINWIGEE-IPRMLRARLGTHTGFVNQLVTPYHVDIKCTVKSEISKXXXXXXXAKASGKASMVLSDDAQSRGSGGRMTSSYSSSSASTQG--------SNTTGKTFAGAGSKFTTPSAVPKSSGST-LGFDDEQQVRDTIKDVRSDSTDTNWCLVGYKNDTTLTVIAKGNGGVDELVGHLNSKIVAYGLVREVERFDLSDTIKFAFIDFVGEDINRMFRAKLGTH 478
BLAST of mRNA_E-siliculosus-1a_F_contig1199.1255.1 vs. uniprot
Match: F0ZAG9_DICPU (ADF-H domain-containing protein (Fragment) n=1 Tax=Dictyostelium purpureum TaxID=5786 RepID=F0ZAG9_DICPU) HSP 1 Score: 79.7 bits (195), Expect = 3.680e-14 Identity = 41/93 (44.09%), Postives = 57/93 (61.29%), Query Frame = 1
Query: 637 PEAFGRAVKDVRSDMSFADWCLLGYKNETVLRMVGTGNGGLQCLLDAAEPYGVNYGLLRVSEKFDGVFHEAYCFISWIPENIPAFVKARVSTH 915
PE + A+KDVRSD S +WCL+GY NET L ++G GNGG L + V YGL+R E+FD + FI+++ E IP +A++ TH
Sbjct: 1 PEVY-EALKDVRSDASDTNWCLIGYANETTLSVLGKGNGGADELAQHLKSNIVAYGLVREVERFDLSDTVKFAFINFVGEEIPRMFRAKLGTH 92
BLAST of mRNA_E-siliculosus-1a_F_contig1199.1255.1 vs. uniprot
Match: D3BR95_POLPP (Uncharacterized protein n=1 Tax=Polysphondylium pallidum (strain ATCC 26659 / Pp 5 / PN500) TaxID=670386 RepID=D3BR95_POLPP) HSP 1 Score: 64.3 bits (155), Expect = 2.490e-7 Identity = 38/126 (30.16%), Postives = 69/126 (54.76%), Query Frame = 1
Query: 49 EALQAAIANVRSDTAREDWLLCGFDGGEDIRLIGTGVGGIEALKASIVKLDVCYGLVRCSNTLEQAGYVQTSFVKFVWVYWRPDNNIPVMRKMKIGVNEGEMKSLFAPYHAELQACALHELGEQPL 426
+ L++ +A+V+S + +W+L G++G E + L+G+G GGI+ L +++ V YGLV+ S+ ++ + + T + WV N+ M K KI ++G + F+P L A EL + L
Sbjct: 216 DGLKSLLADVKSPQSSTNWMLIGYEGNEQLSLVGSGSGGIDELVSNLRADQVNYGLVKVSDRIDNS--ITTKVAQINWV----GINVSPMFKGKITSHKGVVDDFFSPISIALYAEITKELTNEIL 335
BLAST of mRNA_E-siliculosus-1a_F_contig1199.1255.1 vs. uniprot
Match: A0A1Y1W684_9FUNG (Actin depolymerizing protein n=1 Tax=Linderina pennispora TaxID=61395 RepID=A0A1Y1W684_9FUNG) HSP 1 Score: 59.7 bits (143), Expect = 6.350e-7 Identity = 40/132 (30.30%), Postives = 66/132 (50.00%), Query Frame = 1
Query: 37 PVIGEALQAAIANVRSDTAREDWLLCGF--DGGEDIRLIGTGVGGIEALKASIVKLDVCYGLVRCSNTLEQAGYVQTSFVKFVWVYWRPDNNIPVMRKMKIGVNEGEMKSLFAPYHAELQACALHELGEQPL 426
P I EA + NVR D + +WLL F D +++++ GTG GG++ LK + +G VR + ++ KFV++ W VMRK K+ V +G++K++ + E+ A L EL +
Sbjct: 7 PEIAEAYE----NVRDDKSETNWLLLEFVDDRKDELKVGGTGTGGLDELKTHLKDDQAAFGYVRMIMSNDELS----QRTKFVFISWCGVGT-RVMRKAKLSVQKGDVKNVLRSFSIEVPASELGELANDEI 129
BLAST of mRNA_E-siliculosus-1a_F_contig1199.1255.1 vs. uniprot
Match: UPI000440FAD2 (ADF-like domain-containing protein n=1 Tax=Stereum hirsutum (strain FP-91666) TaxID=721885 RepID=UPI000440FAD2) HSP 1 Score: 55.8 bits (133), Expect = 1.270e-5 Identity = 38/133 (28.57%), Postives = 62/133 (46.62%), Query Frame = 1
Query: 34 APVIGEALQAAIANVRSDTAREDWLLCGF--DGGEDIRLIGTGVGGIEALKASIVKLDVCYGLVRCSNTLEQAGYVQTSFVKFVWVYWRPDNNIPVMRKMKIGVNEGEMKSLFAPYHAELQACALHELGEQPL 426
A V +Q A +VRSD +W+L + D + + L TG GG+ LK + Y VR ++ + F+ VW+ + VMRK KI V G++K++ + E+ A +L E+P+
Sbjct: 2 ADVSDPQIQEAYEDVRSDKTDTNWMLIDYETDRSDKLVLTKTGSGGLSELKEVVDPSKASYAYVRVGYANDKESK-REKFILVVWI----GSGCKVMRKAKISVQAGDVKTVLRVFSIEVAAREKDDLNEEPI 129 The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig1199.1255.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90) Total hits: 10
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-siliculosus-1a_F_contig1199.1255.1 >prot_E-siliculosus-1a_F_contig1199.1255.1 ID=prot_E-siliculosus-1a_F_contig1199.1255.1|Name=mRNA_E-siliculosus-1a_F_contig1199.1255.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=662bp MLVARNHVHSKAPVIGEALQAAIANVRSDTAREDWLLCGFDGGEDIRLIGback to top mRNA from alignment at E-siliculosus-1a_F_contig1199:3152..10873- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-siliculosus-1a_F_contig1199.1255.1 ID=mRNA_E-siliculosus-1a_F_contig1199.1255.1|Name=mRNA_E-siliculosus-1a_F_contig1199.1255.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=7722bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1199:3152..10873- (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top Coding sequence (CDS) from alignment at E-siliculosus-1a_F_contig1199:3152..10873- >mRNA_E-siliculosus-1a_F_contig1199.1255.1 ID=mRNA_E-siliculosus-1a_F_contig1199.1255.1|Name=mRNA_E-siliculosus-1a_F_contig1199.1255.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=3972bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1199:3152..10873- (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top |