mRNA_E-siliculosus-1a_F_contig1195.1240.1 (mRNA) Ectocarpus siliculosus Ec863f_EcPH12_90f female
|
Overview
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig1195.1240.1 vs. uniprot
Match: D8LID5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LID5_ECTSI) HSP 1 Score: 637 bits (1644), Expect = 2.200e-227 Identity = 338/374 (90.37%), Postives = 342/374 (91.44%), Query Frame = 1
Query: 1 PSYTNPPHTPPIFILRSSPHAHSVLHAALFLQKTRAWIRWIRSSPRSPETPHYLSFESEYSIERMSRFVVTGANKGIGLEIVKGLLETNKNAFVFLGSRDAARGQNAVQSLLEQNSESYSGRIEALQIDVSDASSVLQASETVRARLQSGGXXXXXXXXXXXSSPAYLDALINNAGMMPEDASSPTGFASCIDVNFRGVVRTTEAFLPLLEPSKGRVVNTSSTLGPSFVAKCSPERQALMTDPDVTHAQITRLVDECLAIASADGSLRGKFAAAGLSGIDGNMGVYGLSKALVNMYTVQLAREHPLLTINAAHPGFIKTDMTAPFEQSAGRTLEEMGAQTPAEGARVLVHLATAKVRGSGWYFDSDLQRSSLGR 1122
PS P T IF LRSSPHAHSVLHAALFLQK RAWIRWIRSSPRSPETPHYL E MSRFVVTGANKGIGLEIVKGLLETNKNAFVFLGSRDAARGQNAVQSLLEQNSESYSGR+EAL+IDVSDASSVLQASETVR RLQSGG SSPAYLDALINNAGMMPEDASSPTGFASCIDVNFRGVVRTTEAFLPLLEP KGR+VNTSSTLGPSFVAKCSPERQALMTDPDVTHAQITRLVDECLAIASADGSLRGKFAAAGLSGIDGNMGVYGLSKALVNMYTVQLAREHP LTINAAHPGFIKTDMTAPFEQSAGRTLEEMGA+TPAEGARVLVHLATAKVRGSGWYFDSDLQRSSLGR
Sbjct: 19 PSTLGTPATHLIFHLRSSPHAHSVLHAALFLQKRRAWIRWIRSSPRSPETPHYLWILGRLQRESMSRFVVTGANKGIGLEIVKGLLETNKNAFVFLGSRDAARGQNAVQSLLEQNSESYSGRVEALEIDVSDASSVLQASETVRTRLQSGGCGGGDGAGV--SSPAYLDALINNAGMMPEDASSPTGFASCIDVNFRGVVRTTEAFLPLLEPWKGRIVNTSSTLGPSFVAKCSPERQALMTDPDVTHAQITRLVDECLAIASADGSLRGKFAAAGLSGIDGNMGVYGLSKALVNMYTVQLAREHPSLTINAAHPGFIKTDMTAPFEQSAGRTLEEMGAKTPAEGARVLVHLATAKVRGSGWYFDSDLQRSSLGR 390
BLAST of mRNA_E-siliculosus-1a_F_contig1195.1240.1 vs. uniprot
Match: D8LID4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LID4_ECTSI) HSP 1 Score: 510 bits (1313), Expect = 5.110e-177 Identity = 285/381 (74.80%), Postives = 309/381 (81.10%), Query Frame = 1
Query: 49 SSPHAHSV-LHAALFLQKTRAWIRWI--RSSPRSPETPHYLSFESEYSI--------ERMSRFVVTGANKGIGLEIVKGLLETNKNAFVFLGSRDAARGQNAVQSLLEQNSESYSGRIEALQIDVSDASSVLQASETVRARLQSGGXXXXXXXXXXXSSPAYLDALINNAGMMPEDASSPTGFASCIDVNFRGVVRTTEAFLPLLEPSKGRVVNTSSTLGPSFVAKCSPERQALMTDPDVTHAQITRLVDECLAIASADGSLRGKFAAAGLSGIDGNMGVYGLSKALVNMYTVQLAREHPLLTINAAHPGFIKTDMTAPFEQSAGRTLEEMGAQTPAEGARVLVHLATAKVRGSGWYFDSDLQRSSLGR*EAS---AYDEK 1149
++P+ SV LH ALFL + + ++ R PETP +F + E MSRFVVTGANKGIGLEIVKGLLETNKNAFVFLGSRDAARGQNAVQSLLEQNSESYSGR+EAL+IDVSDASSVLQASETVR RLQSGG SSPAYLDALINNAGM+PEDASSPTGFASCIDVNFRGVVRTTEAFLPLLEPSKGRV TSS+ GPSFVAKCSPERQALMTDPDVTHAQITRLVDECLAIASADG L KFAA GLSG+DG MGVYGLSKALVNMYTVQLAREHP L +NA PGFIKTDMTAPFE++ G++L+EMGA+TPAEGA+VLVHLAT +V SGWYF SDLQRS L R + AYD K
Sbjct: 17 TAPNPRSVVLHTALFLAENKGLEICFGEAAAVRRPETPQ--TFRVSIPLGGGIRRERESMSRFVVTGANKGIGLEIVKGLLETNKNAFVFLGSRDAARGQNAVQSLLEQNSESYSGRVEALEIDVSDASSVLQASETVRTRLQSGGCGGSDGAGV--SSPAYLDALINNAGMIPEDASSPTGFASCIDVNFRGVVRTTEAFLPLLEPSKGRVAITSSSSGPSFVAKCSPERQALMTDPDVTHAQITRLVDECLAIASADGGLEEKFAAVGLSGMDGKMGVYGLSKALVNMYTVQLAREHPALIVNACTPGFIKTDMTAPFEKTMGKSLDEMGAKTPAEGAKVLVHLATGEVPSSGWYFGSDLQRSPLDRYRSPGDPAYDGK 393
BLAST of mRNA_E-siliculosus-1a_F_contig1195.1240.1 vs. uniprot
Match: A0A6H5JJF8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJF8_9PHAE) HSP 1 Score: 500 bits (1288), Expect = 6.480e-173 Identity = 267/329 (81.16%), Postives = 287/329 (87.23%), Query Frame = 1
Query: 172 SEYSIERMSRFVVTGANKGIGLEIVKGLLETNKNAFVFLGSRDAARGQNAVQSLLEQNSESYSGRIEALQIDVSDASSVLQASETVRARLQSGGXXXXXXXXXXXSSPAYLDALINNAGMMPEDASSPTGFASCIDVNFRGVVRTTEAFLPLLEPSKGRVVNTSSTLGPSFVAKCSPERQALMTDPDVTHAQITRLVDECLAIASADGSLRGKFAAAGLSGIDGNMGVYGLSKALVNMYTVQLAREHPLLTINAAHPGFIKTDMTAPFEQSAGRTLEEMGAQTPAEGARVLVHLATAKVRGSGWYFDSDLQRSSLGR*EAS---AYDEK 1149
S++ IE M RFVVTGANKGIGLEIVK LL+TNKNAFVFLGSRDAARGQNAVQSLLEQNSESYSGR+EALQIDVSD SSVLQASETVRARLQSGG SPAYLDALINNAGM+PEDASSPTGFASCIDVNFRGVVRTTEAFLPLL+PSKGRV TSS+ GPSFVAKCSPERQALMTDPDVTHAQIT LVDECLAIASADGSL KFAA GLSG+DG MGVYGLSKALVNMYT+QLAREHP L +NA PGFIKTDMTAPFE++ G++L+EMGA+TPAEGA+V+VHLAT +V SGWYF SDLQRS LGR + AYD K
Sbjct: 87 SKHFIESMPRFVVTGANKGIGLEIVKALLKTNKNAFVFLGSRDAARGQNAVQSLLEQNSESYSGRVEALQIDVSDPSSVLQASETVRARLQSGGGGGSDGTGAP--SPAYLDALINNAGMIPEDASSPTGFASCIDVNFRGVVRTTEAFLPLLKPSKGRVAITSSSSGPSFVAKCSPERQALMTDPDVTHAQITALVDECLAIASADGSLEEKFAAVGLSGMDGKMGVYGLSKALVNMYTIQLAREHPTLIVNACTPGFIKTDMTAPFEKTMGKSLDEMGAKTPAEGAKVVVHLATGEVPSSGWYFGSDLQRSPLGRYRSPGDPAYDGK 413
BLAST of mRNA_E-siliculosus-1a_F_contig1195.1240.1 vs. uniprot
Match: A0A7S1TKA3_9RHOD (Hypothetical protein n=1 Tax=Erythrolobus australicus TaxID=1077150 RepID=A0A7S1TKA3_9RHOD) HSP 1 Score: 228 bits (580), Expect = 2.340e-67 Identity = 138/312 (44.23%), Postives = 191/312 (61.22%), Query Frame = 1
Query: 190 RMSRFVVTGANKGIGLEIVKGLLETNKNAFVFLGSRDAARGQNAVQSLLEQNSESYSGRIEALQIDVSDASSVLQASETVRARLQSGGXXXXXXXXXXXSSPAYLDALINNAGM---MPEDASSPTGFASCIDVNFRGVVRTTEAFLPLLEPSKGRVVNTSSTLGPSFVAKCSPERQALMTDPDVTHAQITRLVDECLAIASADGSLRGKFAAAGLSGIDGNMGVYGLSKALVNMYTVQLAREHPLLTINAAHPGFIKTDMTAPFEQSAGRTLEEMGAQTPAEGARVLVHLATAKVRGSGWYFDSDLQRSSL 1116
+M VVTGANKGIGL I +GLL FVFLGSRD RG++A+++L R +ALQ+DV SV A E V+ +L +GG L L+NNAG+ + E+A + F SC+ +NF G R T AFLPLL+ S+GRVVN SS GP++V++C E+Q L+ ++T A++ R+VDE + IA G A G +G D N YGLSKALVN YT LAREH L INA PGFI TD+T + +S+G++ +E+G +TP EGA+V++HL +++ G+G ++ SD RS +
Sbjct: 34 KMKFVVVTGANKGIGLAIARGLLRDG--FFVFLGSRDLGRGESAIKTL----DGGLESRAQALQLDVESDKSVSSAVEAVKEKLGAGGK---------------LYGLVNNAGVAGGLFENAPAAEAFQSCVGINFGGTRRVTAAFLPLLDSSEGRVVNVSSAAGPNYVSRCDAEKQTLLCKKEITMAELDRVVDENMKIARDGGG-----DAFGAAGWDSN--AYGLSKALVNAYTQLLAREHSALKINACTPGFIATDLTESYVKSSGKSAKELGMKTPDEGAKVVLHLLQSELTGNGRFYGSDCLRSPI 317
BLAST of mRNA_E-siliculosus-1a_F_contig1195.1240.1 vs. uniprot
Match: A0A4Y6PR47_9DELT (SDR family NAD(P)-dependent oxidoreductase n=1 Tax=Persicimonas caeni TaxID=2292766 RepID=A0A4Y6PR47_9DELT) HSP 1 Score: 222 bits (566), Expect = 1.190e-65 Identity = 141/310 (45.48%), Postives = 176/310 (56.77%), Query Frame = 1
Query: 205 VVTGANKGIGLEIVKGLLETNKNAFVFLGSRDAARGQNAVQSLLEQNSESYSG----RIEALQIDVSDASSVLQASETVRARLQSGGXXXXXXXXXXXSSPAYLDALINNAGMMPEDASSPTGFASCIDVNFRGVVRTTEAFLPLLEPSKGRVVNTSSTLGPSFVAKCSPERQALMTDPDVTHAQITRLVDECLAIASADGSLRGKFAAAGLSGIDGNMGVYGLSKALVNMYTVQLAREHPLLTINAAHPGFIKTDMTAPFEQSAGRTLEEMGAQTPAEGARVLVHLATAKVRGSGWYFDSDLQRSSLGR 1122
+VTGAN+G+GL V LL+ + VFLGSR RG+ A +L S+ R+E +QIDVSD +SV QA+ETV RL +P Y L+NNAG+ D S T +DVN RG R EAFLPLL R+VN +S GP+FV+ CSPERQA +TDP++T +I ++DE +AI DG F AAG G YGLSKA +N YTV LAREH LTINA PGFI+T MT P + G + EMG + P EG + L + GSGWYF SD +RS L R
Sbjct: 9 LVTGANRGVGLATVAALLDERDDTHVFLGSRSLERGEEARDKVLADQSDXXXXXXXKRVEVVQIDVSDDASVQQAAETVAERL--------------GDAPLY--GLVNNAGIGDRDRSMRT----VLDVNTRGPHRVCEAFLPLLTHDDARIVNVASASGPNFVSGCSPERQAQLTDPEITWDEIEEIMDEAIAIDEGDGD----FEAAGFGGGS----AYGLSKACLNAYTVALAREHSDLTINACTPGFIETGMTRPMAERQGVSPAEMGMKPPEEGTTAQMFLLFGEPGGSGWYFGSDAERSPLDR 290
BLAST of mRNA_E-siliculosus-1a_F_contig1195.1240.1 vs. uniprot
Match: A0A838IAU7_9DELT (SDR family NAD(P)-dependent oxidoreductase n=1 Tax=Bradymonadaceae bacterium TaxID=2740543 RepID=A0A838IAU7_9DELT) HSP 1 Score: 220 bits (560), Expect = 8.440e-65 Identity = 137/308 (44.48%), Postives = 177/308 (57.47%), Query Frame = 1
Query: 199 RFVVTGANKGIGLEIVKGLLETNKNAFVFLGSRDAARGQNAVQSLLEQNSESYSGRIEALQIDVSDASSVLQASETVRARLQSGGXXXXXXXXXXXSSPAYLDALINNAGMMPEDASSPTGFASCIDVNFRGVVRTTEAFLPLLEPSKGRVVNTSSTLGPSFVAKCSPERQALMTDPDVTHAQITRLVDECLAIASADGSLRGKFAAAGLSGIDGNMGVYGLSKALVNMYTVQLAREHPLLTINAAHPGFIKTDMTAPFEQSAGRTLEEMGAQTPAEGARVLVHLATAKVRGSGWYFDSDLQRSSLGR 1122
R ++TGANKGIG +L + V LGSR RG+ A L+ QN ++ RI L IDVSD SV +A++TV A + L L+NNAG+ A T ++VN G R EAF+ LL+P +GR+VN SS G FVA CS ERQ ++T PDVT QI L+ E LA+ +A RG FA+AGL G+ YG SKA +N YT+ LAR+HP LTINA PGFI+TD+T PF +S G + MG ++P EG + +HL ++ GSGWYF SD QRS L R
Sbjct: 7 RILITGANKGIGCATSGAVLAASDEPHVLLGSRSLERGEAARAELVAQNP-GWASRIRVLGIDVSDDLSVSEAAQTVAAWFEGEAHP--------------LFGLVNNAGIGLGSAEMQT----VLNVNTHGPRRVCEAFIGLLDPGQGRIVNVSSASGTMFVAACSEERQRMLTSPDVTWQQIEALMHEALALEAA----RGDFASAGL----GDGSAYGFSKACLNAYTIALARQHPNLTINACTPGFIETDLTRPFAESRGMDPKAMGMKSPEEGTKATLHLLLGELSGSGWYFGSDAQRSPLDR 287
BLAST of mRNA_E-siliculosus-1a_F_contig1195.1240.1 vs. uniprot
Match: A0A849YT65_9DELT (SDR family NAD(P)-dependent oxidoreductase n=1 Tax=Polyangiaceae bacterium TaxID=2268199 RepID=A0A849YT65_9DELT) HSP 1 Score: 215 bits (547), Expect = 5.830e-63 Identity = 136/318 (42.77%), Postives = 182/318 (57.23%), Query Frame = 1
Query: 193 MSRFVVTGANKGIGLEIVKGLLETNKNAFVFLGSRDAARGQNAVQSLLEQNSESYSGRIEALQIDVSDASSVLQASETVRARLQSGGXXXXXXXXXXXSSPAYLDALINNAGMMPEDASSPTGFASCIDVNFRGVVRTTEAFLPLLEPSKGRVVNTSSTLGPSFVAKCSPERQALMTDPDVTHAQITRLVDECLAIASADGSLRGKFAAAGLSGIDGNMGVYGLSKALVNMYTVQLAREHPLLTINAAHPGFIKTDMTAPFEQSAGRTLEEMGAQTPAEGARVLVHLATAKVRGSGWYFDSDLQRSSLGR*EASAYDE 1146
M R +VTGANKGIGL IV+ +L + + FV+L SRD RG+ A L ++ ++ R+E + +DV+D SV A+ V LQ + L ++NNAG+ + + FA ++ N G+ R EAFLPLLEPS GRVVN +S GP FVA CS E + DP +T A++ LVD+C+ IA G R FAA GL G+ YG SKA N YT+ LA EHP L +NA PGFI TDMT + S G++ E+G +TPAEGAR +HL K+ G+G ++ SD +RS L R A E
Sbjct: 1 MKRILVTGANKGIGLAIVEAILAEHADTFVYLASRDPERGRAAAAELGKRAG--FAARLEVVSLDVADDKSVAAAAVQVHESLQG----------------SKLYGIVNNAGIGLQSSD----FAGVVETNLHGLHRVCEAFLPLLEPSGGRVVNVTSASGPLFVADCSAEMKRFFVDPQMTWARLRALVDDCMKIA---GDPRA-FAAKGL----GDGAAYGFSKACGNSYTMILAGEHPSLVVNACTPGFIATDMTRHYADSQGKSPAEIGMKTPAEGARAPMHLLFGKLEGNGRFYGSDAKRSPLDRYRAPGSPE 288
BLAST of mRNA_E-siliculosus-1a_F_contig1195.1240.1 vs. uniprot
Match: A0A0K1Q7D8_9DELT (Short chain dehydrogenase n=2 Tax=Labilithrix luteola TaxID=1391654 RepID=A0A0K1Q7D8_9DELT) HSP 1 Score: 212 bits (540), Expect = 6.570e-62 Identity = 135/310 (43.55%), Postives = 179/310 (57.74%), Query Frame = 1
Query: 193 MSRFVVTGANKGIGLEIVKGLLETNKNAFVFLGSRDAARGQNAVQSLLEQNSESYSGRIEALQIDVSDASSVLQASETVRARLQSGGXXXXXXXXXXXSSPAYLDALINNAGMMPEDASSPTGFASCIDVNFRGVVRTTEAFLPLLEPSKGRVVNTSSTLGPSFVAKCSPERQALMTDPDVTHAQITRLVDECLAIASADGSLRGKFAAAGLSGIDGNMGVYGLSKALVNMYTVQLAREHPLLTINAAHPGFIKTDMTAPFEQSAGRTLEEMGAQTPAEGARVLVHLATAKVRGSGWYFDSDLQRSSLGR 1122
M R +VTGANKGIG IV+ +LE + + FV+LGSRDAARGQ A +L + + R + + +DVS+ SV +A+E V L + L A++NNAG+ +S T + N G+ R E FLPLL+P GR+VN +S GPSFVA+CS Q D T ++ +DEC+A+ DG + FAA GL DG YGLSKAL N YTV LAREHP L INA PGFI+TDMT + +S G++ E+G + P+ GAR +HL + G+G Y+ SD QRS L R
Sbjct: 3 MRRILVTGANKGIGFAIVQAILEEHDDTFVYLGSRDAARGQAARMALKPE----WQARADVVALDVSEDQSVARAAEQVARSLGN----------------EKLYAIVNNAGIGTGAGASLT---KVLQTNTVGMHRVCERFLPLLDPVNGRIVNVTSASGPSFVARCSTAMQRFFLDTQATWPRLQSFIDECIAM---DGD-KPAFAAKGLD--DGE--AYGLSKALANTYTVLLAREHPALRINACTPGFIETDMTRRYAESQGKSPAEVGMKPPSAGARTPMHLLFGTLEGNGHYYGSDAQRSPLDR 281
BLAST of mRNA_E-siliculosus-1a_F_contig1195.1240.1 vs. uniprot
Match: A0A7Y5NRL2_9DELT (SDR family NAD(P)-dependent oxidoreductase n=1 Tax=Polyangiaceae bacterium TaxID=2268199 RepID=A0A7Y5NRL2_9DELT) HSP 1 Score: 202 bits (515), Expect = 3.420e-58 Identity = 125/318 (39.31%), Postives = 175/318 (55.03%), Query Frame = 1
Query: 193 MSRFVVTGANKGIGLEIVKGLLETNKNAFVFLGSRDAARGQNAVQSLLEQNSESYSGRIEALQIDVSDASSVLQASETVRARLQSGGXXXXXXXXXXXSSPAYLDALINNAGMMPEDASSPTGFASCIDVNFRGVVRTTEAFLPLLEPSKGRVVNTSSTLGPSFVAKCSPERQALMTDPDVTHAQITRLVDECLAIASADGSLRGKFAAAGLSGIDGNMGVYGLSKALVNMYTVQLAREHPLLTINAAHPGFIKTDMTAPFEQSAGRTLEEMGAQTPAEGARVLVHLATAKVRGSGWYFDSDLQRSSLGR*EASAYDE 1146
M +VTG NKGIGL IV+ +L + + FV +GSRD RG+ A L + E R++ + +DV+D SV A+ TV +L L ++NNAG+ SS + ++ N G+ R EAFL LLEP GR+VN +S GP FVA CS E+Q D ++ + +D+CL +A + FAA GL G+ YGLSKA N YTV +AREHP L +NA PGFI TDMT + +SAG++ ++G +TPA+GAR +HL + G+G ++ SD +RS L R A +E
Sbjct: 1 MRHILVTGGNKGIGLAIVEAILAEHSDTFVHMGSRDLERGRAAAARLTTERPE-LGKRLDVVALDVADDRSVADAARTVENKLAG----------------ERLYGIVNNAGI----GSSGGDLEAVLETNVLGIRRVCEAFLALLEPKGGRIVNVTSASGPMFVAACSDEKQRFFVDAQISWPMLRAFIDDCLEMAKKGATA---FAANGL----GDGSPYGLSKACANAYTVIVAREHPALRVNACTPGFIATDMTRHYAESAGKSPADLGMKTPADGARAPMHLLFGTLEGNGRFYGSDAKRSPLDRYRAPGSNE 290
BLAST of mRNA_E-siliculosus-1a_F_contig1195.1240.1 vs. uniprot
Match: A0A4Q3Z3Z0_9RHOB (SDR family NAD(P)-dependent oxidoreductase n=1 Tax=Tropicimonas sp. IMCC6043 TaxID=2510645 RepID=A0A4Q3Z3Z0_9RHOB) HSP 1 Score: 199 bits (507), Expect = 4.920e-57 Identity = 131/310 (42.26%), Postives = 172/310 (55.48%), Query Frame = 1
Query: 193 MSRFVVTGANKGIGLEIVKGLLETNKNAFVFLGSRDAARGQNAVQSLLEQNSESYSGRIEALQIDVSDASSVLQASETVRARLQSGGXXXXXXXXXXXSSPAYLDALINNAGMMPEDASSPTGFASCIDVNFRGVVRTTEAFLPLLEPSKGRVVNTSSTLGPSFVAKCSPERQALMTDPDVTHAQITRLVDECLAIASADGSLRGKFAAAGLSGIDGNMGVYGLSKALVNMYTVQLAREHPLLTINAAHPGFIKTDMTAPFEQSAGRTLEEMGAQTPAEGARVLVHLATAKVRGSGWYFDSDLQRSSLGR 1122
M R +VTGANKGIG I + +LE + FVFLGSRD ARG A +SL ++ + RI +++DVS SV A+ VR GG L ++NNAG+ S ++VN RGV R +AF+PLL GR+VN +S GP+FVA CS +RQA +P VT +I L++EC AIA G+ FA+ GL G+ YGLSKA N YT+ LAR +P INA PGFI TD+T P+ G+T EE+G ++P EGA + L SG Y+ SD +RS L R
Sbjct: 1 MRRILVTGANKGIGFAIAERILEEADDTFVFLGSRDLARGNTAAESLSRAGAD-RADRIRVVELDVSSDVSVDHAARKVREAC--GGDK--------------LYGIVNNAGI----GLGTDDLRSVLNVNTRGVQRVCDAFIPLLSDG-GRIVNITSAAGPNFVATCSEDRQAFFKNPAVTWEEIEALMEECTAIAGDSGA----FASRGL----GDGSPYGLSKACANAYTLHLARAYPQFIINACTPGFIATDLTRPYASGRGKTPEELGMKSPREGANTPIFLLFGTPDSSGHYYGSDAKRSPLDR 280 The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig1195.1240.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-siliculosus-1a_F_contig1195.1240.1 >prot_E-siliculosus-1a_F_contig1195.1240.1 ID=prot_E-siliculosus-1a_F_contig1195.1240.1|Name=mRNA_E-siliculosus-1a_F_contig1195.1240.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=375bp PSYTNPPHTPPIFILRSSPHAHSVLHAALFLQKTRAWIRWIRSSPRSPETback to top mRNA from alignment at E-siliculosus-1a_F_contig1195:17959..21192- Legend: polypeptideCDSUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-siliculosus-1a_F_contig1195.1240.1 ID=mRNA_E-siliculosus-1a_F_contig1195.1240.1|Name=mRNA_E-siliculosus-1a_F_contig1195.1240.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=3234bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1195:17959..21192- (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top Coding sequence (CDS) from alignment at E-siliculosus-1a_F_contig1195:17959..21192- >mRNA_E-siliculosus-1a_F_contig1195.1240.1 ID=mRNA_E-siliculosus-1a_F_contig1195.1240.1|Name=mRNA_E-siliculosus-1a_F_contig1195.1240.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=2250bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1195:17959..21192- (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top |