mRNA_E-siliculosus-1a_F_contig1195.1237.1 (mRNA) Ectocarpus siliculosus Ec863f_EcPH12_90f female
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Overview
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig1195.1237.1 vs. uniprot
Match: D8LID8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LID8_ECTSI) HSP 1 Score: 315 bits (808), Expect = 7.820e-108 Identity = 158/164 (96.34%), Postives = 160/164 (97.56%), Query Frame = 1
Query: 154 MAAAVQAEEFSAREWKDGEAHEVLPKVFLGSMEAAKDKESLKAHGVTHVLTVNGKEPAFKDDFEYKVIKFGGDDGPLTPHLSESLSFVDDGVAAGGVLIHCTHGTGRSAAMAIAAAMKENGKGTPAGVGDFAEAFRVVKSRRPGTDPPMTFQQELGEWASSKSA 645
MAA QAEEFSAREWKDGEAHEVLPKVFLGSMEAAKDKESLKAHGVTHVLTVNGKEPAFKDDF+YKVIKFGG+DGPLTPHLSESLSFVD GVAAGGVLIHCTHGTGRSAAMAIAAAMKENGKGTPAGVGDFAEAFRVVK RRPGTDPPMTFQQELGEWASSKSA
Sbjct: 1 MAAPGQAEEFSAREWKDGEAHEVLPKVFLGSMEAAKDKESLKAHGVTHVLTVNGKEPAFKDDFKYKVIKFGGEDGPLTPHLSESLSFVDAGVAAGGVLIHCTHGTGRSAAMAIAAAMKENGKGTPAGVGDFAEAFRVVKLRRPGTDPPMTFQQELGEWASSKSA 164
BLAST of mRNA_E-siliculosus-1a_F_contig1195.1237.1 vs. uniprot
Match: A0A6H5JRY3_9PHAE (Tyrosine-protein phosphatase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRY3_9PHAE) HSP 1 Score: 235 bits (600), Expect = 1.420e-76 Identity = 117/122 (95.90%), Postives = 120/122 (98.36%), Query Frame = 1
Query: 154 MAAAVQAEEFSAREWKDGEAHEVLPKVFLGSMEAAKDKESLKAHGVTHVLTVNGKEPAFKDDFEYKVIKFGGDDGPLTPHLSESLSFVDDGVAAGGVLIHCTHGTGRSAAMAIAAAMKENGK 519
MAA VQAEEFSAR+WKDGEAHEVLPKVFLGSMEAA+DKESLKAHGVTHVLTVNGKEPAFKDDFEY+VIKFGGDDGPLTPHLSESL FVDDGVAAGGVLIHCTHGTGRSAAMAIAAAMKENGK
Sbjct: 1 MAAPVQAEEFSARKWKDGEAHEVLPKVFLGSMEAARDKESLKAHGVTHVLTVNGKEPAFKDDFEYRVIKFGGDDGPLTPHLSESLPFVDDGVAAGGVLIHCTHGTGRSAAMAIAAAMKENGK 122
BLAST of mRNA_E-siliculosus-1a_F_contig1195.1237.1 vs. uniprot
Match: A0A835Z9I7_9STRA (Protein-tyrosine phosphatase-like protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z9I7_9STRA) HSP 1 Score: 127 bits (320), Expect = 1.100e-33 Identity = 74/167 (44.31%), Postives = 93/167 (55.69%), Query Frame = 1
Query: 190 REWKDGEAHEVLPKVFLGSMEAAKDKESLKAHGVTHVLTVNGKEPAFKDDFEYKVIKFGGDDGPLTPHLSESLSFVDDGVAAGG-VLIHCTHGTGRSAAMAIAAAMKENGK--------------GTPAGVGD---FAEAFRVVKSRRPGTDPPMTFQQELGEWASS 636
RE +G A EV P VFLG AA DKESLK G+THVLT NG+ P +DF+YK + + P L +L F+D+ A GG VL+HCTHGTGRSAA+ IA M+ + G +GD A A +VK RRPGTDPP + +L WA +
Sbjct: 5 RELPNGAAQEVKPGVFLGGSAAALDKESLKGMGITHVLTANGEAPLHPNDFKYKTLSVTEKGDGVAPVLPGALQFIDEATAGGGSVLVHCTHGTGRSAALVIAHVMQTETEVGAQPLLSAAYGIVGVAGMIGDNVDAAAALSIVKERRPGTDPPTPYSAQLDAWAKN 171
BLAST of mRNA_E-siliculosus-1a_F_contig1195.1237.1 vs. uniprot
Match: A0A059D105_EUCGR (Uncharacterized protein n=4 Tax=Eucalyptus grandis TaxID=71139 RepID=A0A059D105_EUCGR) HSP 1 Score: 85.5 bits (210), Expect = 3.710e-17 Identity = 58/153 (37.91%), Postives = 82/153 (53.59%), Query Frame = 1
Query: 184 SAREW--KDGEAHEVLPKVFLGSMEAAKDKESLKAHGVTHVLTV-NGKEPAFKDDFEYKVIKFGG-DDGPLTPHLSESLSFVDDGVA-AGGVLIHCTHGTGRSAAMAIAAAMKENGKGTPAGVGDFAEAFRVVKSRRPGTDPPMTFQQELGEW 627
S EW KD + ++ +FLGS+ AAK+K++LK V HVL V + EPA+ DDF YKVIK +D + E F+D+ GGVL+HC G RS + +A MK++G ++A VKSRRP P F +L ++
Sbjct: 21 SLTEWTDKDKDPCKIEEGLFLGSVGAAKNKDALKHLNVMHVLIVASALEPAYPDDFVYKVIKVTDREDTNIRECFDECFEFIDEAKRLGGGVLVHCFVGKSRSVTIVVAYLMKKHGM-------SLSQALEHVKSRRPQASPNSGFMSQLQDY 166
BLAST of mRNA_E-siliculosus-1a_F_contig1195.1237.1 vs. uniprot
Match: D3BKD3_POLPP (Uncharacterized protein n=1 Tax=Polysphondylium pallidum (strain ATCC 26659 / Pp 5 / PN500) TaxID=670386 RepID=D3BKD3_POLPP) HSP 1 Score: 84.3 bits (207), Expect = 3.220e-16 Identity = 50/145 (34.48%), Postives = 77/145 (53.10%), Query Frame = 1
Query: 208 EAHEVLPKVFLGSMEAAKDKESLKAHGVTHVLTVNGKEPAFKDDFEYKVIKFGGDDGP---LTPHLSESLSFVDDGVAAGGVLIHCTHGTGRSAAMAIAAAMKENGKGTPAGVGDFAEAFRVVKSRRPGTDPPMTFQQELGEWAS 633
+A +VLPK+F+GS +AA SLK H +THVL+++ PA+ +D +K + +D L + ++ F+D G + GG+LIHC+ G RSA + I+ M K F F+ +KS RP P F +L + S
Sbjct: 19 DAQQVLPKLFIGSAQAANSVSSLKDHNITHVLSISTNPPAYGNDNHFKCLSISIEDEEKKDLKSYFDQAHKFIDQGRSIGGILIHCSAGVSRSATIVISYLMSFFFK-------PFMYCFQYLKSIRPCIQPNRGFISQLISYES 156
BLAST of mRNA_E-siliculosus-1a_F_contig1195.1237.1 vs. uniprot
Match: A0A803Q8I3_CANSA (Uncharacterized protein n=7 Tax=Cannabis sativa TaxID=3483 RepID=A0A803Q8I3_CANSA) HSP 1 Score: 82.0 bits (201), Expect = 7.490e-16 Identity = 49/138 (35.51%), Postives = 77/138 (55.80%), Query Frame = 1
Query: 232 VFLGSMEAAKDKESLKAHGVTHVLTV-NGKEPAFKDDFEYKVIKFGG-DDGPLTPHLSESLSFVDDGVAAGG-VLIHCTHGTGRSAAMAIAAAMKENGKGTPAGVGDFAEAFRVVKSRRPGTDPPMTFQQELGEWASS 636
+FLGS+EAA++K LK +TH+LTV + P + D+F YK+I +D + E +F+D+ GG VL+HC G RSA + +A M+++G +EA ++V+S+RP P F +L E+ S
Sbjct: 37 LFLGSLEAARNKSELKELKITHILTVAHCLVPIYPDEFVYKIISVADKEDTDIKQFFDECFNFIDEAKRTGGSVLVHCVVGKSRSATIVVAYLMRQHGM-------SLSEALKLVRSKRPIVAPNSGFLSQLKEFEKS 167
BLAST of mRNA_E-siliculosus-1a_F_contig1195.1237.1 vs. uniprot
Match: A0A2P5FWU6_TREOI (Dual specificity phosphatase n=2 Tax=Cannabaceae TaxID=3481 RepID=A0A2P5FWU6_TREOI) HSP 1 Score: 79.7 bits (195), Expect = 7.160e-15 Identity = 48/138 (34.78%), Postives = 75/138 (54.35%), Query Frame = 1
Query: 232 VFLGSMEAAKDKESLKAHGVTHVLTVNG-KEPAFKDDFEYKVIKFGG-DDGPLTPHLSESLSFVDDGV-AAGGVLIHCTHGTGRSAAMAIAAAMKENGKGTPAGVGDFAEAFRVVKSRRPGTDPPMTFQQELGEWASS 636
+FLGS EAA++K++LK +TH+LTV P ++++F YKVI +D L + E F++ + GGVL+HC G RS + +A M+++G +EA + KS+RP P F +L E+ S
Sbjct: 40 LFLGSFEAARNKDALKQSNITHILTVAYFLNPLYRNEFVYKVINVADREDENLKQYFDECFDFIEGAKRSGGGVLVHCLAGKSRSVTIVVAYLMRKHGM-------SLSEALNLAKSKRPIASPNPGFISQLQEYEKS 170
BLAST of mRNA_E-siliculosus-1a_F_contig1195.1237.1 vs. uniprot
Match: A0A7S4C7Z5_9EUGL (Hypothetical protein (Fragment) n=1 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A7S4C7Z5_9EUGL) HSP 1 Score: 80.5 bits (197), Expect = 9.160e-15 Identity = 51/139 (36.69%), Postives = 74/139 (53.24%), Query Frame = 1
Query: 220 VLPKVFLGSMEAAKDKESLKAHGVTHVLTVNGKEPAFKDDFEYKVIKFGGDDGPLT-PHLSESLSFVDD--GVAAGGVLIHCTHGTGRSAAMAIAAAMKENGKGTPAGVGDFAEAFRVVKSRRPGTDPPMTFQQELGEW 627
V P +F+GSM AA++KE L G+THVLT+NG+ PAF D F+Y+V + +D L L ++ F+ + G + G VL+HCT G RS +M IA M G + A + + RP P +L +W
Sbjct: 35 VRPGLFIGSMHAARNKELLLQLGITHVLTMNGRPPAFPDAFQYEVKRTQNEDRSLLLKFLPTNIHFMHEALGESQGKVLVHCTRGVNRSGSMVIAYLMWTEGL-------SYDAALQQARVARPQILPRDGMVTQLRQW 166
BLAST of mRNA_E-siliculosus-1a_F_contig1195.1237.1 vs. uniprot
Match: A0A8J4V4W3_9MYCE (Uncharacterized protein n=1 Tax=Polysphondylium violaceum TaxID=133409 RepID=A0A8J4V4W3_9MYCE) HSP 1 Score: 81.3 bits (199), Expect = 3.110e-14 Identity = 46/137 (33.58%), Postives = 70/137 (51.09%), Query Frame = 1
Query: 220 VLPKVFLGSMEAAKDKESLKAHGVTHVLTVNGKEPAFKDDFEYKVIKFGG-DDGPLTPHLSESLSFVDDGVAAGGVLIHCTHGTGRSAAMAIAAAMKENGKGTPAGVGDFAEAFRVVKSRRPGTDPPMTFQQELGEW 627
++ +++LG E + +K LK H +TH+LT+ +P + F+YK I D+ P+ + E F+D+G GGVLIHC G RSA+ IA M N F EAF + RP P F ++L ++
Sbjct: 509 IIDRLYLGCRECSINKNWLKEHNITHILTIAHFKPLYNHLFKYKCIDIDDVDEAPIGKYFKEMNEFIDEGRKEGGVLIHCRAGVSRSASATIAYIMYHNNV-------SFQEAFDITSKGRPRICPNRGFVEQLKQF 638
BLAST of mRNA_E-siliculosus-1a_F_contig1195.1237.1 vs. uniprot
Match: A0A165ZYV9_EXIGL (Protein-serine/threonine phosphatase n=2 Tax=Exidia glandulosa HHB12029 TaxID=1314781 RepID=A0A165ZYV9_EXIGL) HSP 1 Score: 76.3 bits (186), Expect = 2.320e-13 Identity = 48/148 (32.43%), Postives = 79/148 (53.38%), Query Frame = 1
Query: 214 HEVLPKVFLGSMEAAKDKESLKAHGVTHVLTVNGKEPAFK------DDFEYKVIKFGGDDGP---LTPHLSESLSFVDDGVAAGG-VLIHCTHGTGRSAAMAIAAAMKENGKGTPAGVGDFAEAFRVVKSRRPGTDPPMTFQQELGEW 627
+E+LP +FLGS +AA+D ++L+A G+THVLT+ + +K D + + DG L P++ + F+D ++ GG VL+HC G RSA++ A M + G EA +V++ RP P + F ++L E+
Sbjct: 32 NEILPGLFLGSWDAARDTDALRAAGITHVLTLMRELALYKLDNLAAPDCPFTTLHLPIIDGAAFKLLPYVPRCIEFIDAALSGGGKVLVHCFQGVSRSASVVAAYLMAKRGLARD-------EALELVRAARPAIQPNLGFMKQLDEF 172 The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig1195.1237.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-siliculosus-1a_F_contig1195.1237.1 >prot_E-siliculosus-1a_F_contig1195.1237.1 ID=prot_E-siliculosus-1a_F_contig1195.1237.1|Name=mRNA_E-siliculosus-1a_F_contig1195.1237.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=216bp MFRCVLQRVSPTFLPLQPLPAVPYPSLAGKLRAEPLSFVTFSTTRRRVSGback to top mRNA from alignment at E-siliculosus-1a_F_contig1195:7417..9165+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-siliculosus-1a_F_contig1195.1237.1 ID=mRNA_E-siliculosus-1a_F_contig1195.1237.1|Name=mRNA_E-siliculosus-1a_F_contig1195.1237.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=1749bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1195:7417..9165+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top Coding sequence (CDS) from alignment at E-siliculosus-1a_F_contig1195:7417..9165+ >mRNA_E-siliculosus-1a_F_contig1195.1237.1 ID=mRNA_E-siliculosus-1a_F_contig1195.1237.1|Name=mRNA_E-siliculosus-1a_F_contig1195.1237.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=1296bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1195:7417..9165+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top |