mRNA_E-siliculosus-1a_F_contig1194.1233.1 (mRNA) Ectocarpus siliculosus Ec863f_EcPH12_90f female
|
Overview
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig1194.1233.1 vs. uniprot
Match: A0A6H5JBA2_9PHAE (FYVE-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JBA2_9PHAE) HSP 1 Score: 2174 bits (5632), Expect = 0.000e+0 Identity = 1958/2786 (70.28%), Postives = 2026/2786 (72.72%), Query Frame = 3
Query: 504 ARVQIPDSASNTELDRRQWLKQQSKSRRRRQQRGSVSRSSYNSDASSLAGDDSDTXXVASTSSRLSIVSTPEISGRKWQTRQXXXXXXXXXXXQRRSNSLRSSLGRPAATPMVGSPGSSVSGXXXXXXXXXXXSRRSSWSTASMSAVGTRPRGTLTRTNSSSSLSSELSMTLLRWCAVCEAEFTQLRRPHRCRRCLEPVCAPCSPARLPVPGAGSLELKRTCKLCVRDDAAAAPRVGAATPSRRPKAVGKAAAPSPRVARITKRRSASMGSAARAPVGILSKPVYVDTAGLNPAAAAASSPGPADKAAGAAAVEPGEVVGVSGTGGXXXGESGTPAXXXXXXXXXXXXTPEPKPQASGGGTPRSRFGVLSRVASVVTAGLYPAAASSSPSPAGKAGDTAAAGDAAAIEPKAEASMDVDGGDAGKSGMPAASSPGPGDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKGGGESGANAGTDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRAASPLEGDRPAAPPQPLAPKGDDYGAGAAAGTRGAAGSPPXXXXXAGELVTAGSSPVAP-EENGAADAEGRGVSLRLPPTAPGSRSQAAAEPTASDPLHEIFAPRENSGAYADAMEEXXXXXXXXXXXXXXXXXXXLRAAGGESPAASAAAASEATEDGMPAVTGLAA---------AVAGVDGPVNASVVTAPPADAVDGEPATVGVAAEELGDAAVAGVSSPPPVDVDVRAPLADSDVVPSIGAGALGES-----------HDAPPADPKSAASVPNEASSMLGRGASGEDLLPVAVANAGVGGAADVALLGANGAAAVVGPSGDEPHDFEVPSGGVDASPSVADEPSVSVVGKTSSHGKTEASGDDGVVAAPSLPGGVSTSVGGDALPDAVVASGEVSVLPDGSGATGSAPEGSTAEAVMPVSPGVDTESXXXXXXXXXXXXXXXXXXXXXXXXXXXATSGNSVAEAPAPGGGSAPEVSDDSAVPSASGVSGAGEGVELPGGTAVLPVDVAGGADDDHEPSVDSTGQMATIRDTLTTPSSAIEVCASDPAAAAA-DVPAGDASAILPPDMGDAEGGDAPPVAGLAAASGD----GDDEVPAAGGAGDLSALHGSDDTQPPPSPEEILVLPSVASSSPPGRDDAGEGQMSAPETGDAPVRDTAGGGGGVVPLPDTAADSAEPPVDGGVPISASSSGVPAGVESDDLGN-PDA----TVTVPASVPGLPSVDXXXXXXXXXXXXXGKEIPASVGGADGSSAAAAGGRVVLGAPPSAAEVPFSGDTPPLSVPISEKGVAEGGGGGDASVATAAGLDLGVAAAAVSGAVNDAVGAGQSNGQPDDAERQTPLVDVGLAATSGAPSSASKKGKKNKFGLRKPSFLKKSKSSVSEVPASDASGGVSSSAGDTPLSSVSLEXXXXXXXXXXXSSSTQSMSGDPTPEEGASTGASAEAKKPKRGLFGGLSLKKKSSSKGKGKLEVPEVASSDVLAVPDTGGSLPQAPESVAETTCAVDVSV-PDGGSASLPEASGDLSVPGTEEAPTGGDVRAPSGDVSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDGP------------VPD--------------IGASLPEESGDVAV-PDLAXXXXXXXXXXXXXXXXXXX-----------ISASLPE-------------------------ASGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSVPETSXXXXXXXXXXXIPALAXXXXXXXXXXXXXXXXXXXXSASWPEASGKLSXXXXXXXXXXXXXXXXXXXX-----------SMPDTSASPPEDXXXXXXXXXXXSLTGVSGTTAAEPGTDFAAVSGVSPSASPKVSGNLPVPDLTDXXXXXXXXXXXXXXADLSVPRTSEDEQPSAAEVADPSVSVVGEVSEV-DDGAPLAGDEAAAXXXXXXXXXXTGAAVPAGLSEPENGEKLGPTSSVVETSGDPALSGDDVPPVSAVVPAEPSATSIAMGDIPMVVGGEAERPSVAVEEEEKIEETEEGGSAGQEGGSPEVVARAPTFTGTGIAMGDIPAAGAGEAAVESPSAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDHIGXXXXXXXXASGGQLQGTKGSAAGEGAADAVNQPVEEPTVLPPVDGLPEDGSEEEQAAGVTTADGTPASAAVDIVAAAEAVDKVAVGGTADNVADNMAAAAADQAVVTGGGAVTVGALADEEVSMAAGKAGPEGDDDSPASSRAGAAADGSEGGVSRPALSVDDPRSTAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDVDPQPPVAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGADGMLLPAASLDDEGATAPEAFSGXXXXXXXXXXXXXXXXXXXXAGGGVTNPVPTDGDFAVPPGAACKEQQPQQPLAVEEQLAVAAGLEVTHSSPVDDSSADGAAASVAVEVTRTARTTVDGGGADKAPETSVERNGGXXXXXXXXXXXXXXXXXXXXXVASERLGDGAEEAYVELNKSSSPIASPPQGIDGADERGDDMATGTGVQEGTQESGQGPADRDSASLHGLPTGYATGGHPTEESMPS---------------------------------------VRRSGTAVPPNSARGAAAGAGEKDWLDELIEMFSDKCSTCVVDDA 8423
ARVQIPDSASNTELDRRQWLKQQSKSRRRRQQRGSVSRSSY+SDASSLAGDDSDT VASTSSRLSIVSTPEISGRKWQTR+ XXXXXXXXXX SNSLRSSLGRPAATP+VGSPGSSVSG SRRSSWSTASMSAVGTRPRGTLTRTNSSSSLSSELSMTLLRWCAVCE EFTQLRRPHRCRRCLEPVCAPCSPARLPVPGAGSLELKRTCKLCV DDAAAAPRVGAATPSRRPKAVG VGILSKPVY DTAGLNPAAAAASSPGPADK AGAA VEPGEV GVSGTGG E G PA XXXXXXXXXX EPKPQA GG TPRSRFG+LSRVASVVTAGLYPAAASS PSPAGKAG+TAA +EP+A DGGD +SGMPAA XXXXXXXXXXXXXXXXX GGE+GANAG DXXXXXXXXXXXXXXXXXXXXXXXXXXXXX LAPKGDDYGAGAAAGT GAAGSPP AGEL TAGSSP+AP EENGAADAE RGVSLRLPPTA GSRSQAA EPTASDPLHEIFAPRENSGAYADAMEE XXXXX LRAAGGE PAA+AA ASEATE G PA TGLAA VAGVDG NAS +TAPPADAVDGEP VG+A EELGD AVAGVSSPPPVDV+V APLADSDVVPS AGALG DAPP DP SAASVP+EASS LG GASGE LLPVAVANAGVGGAADVALLGANGAAAVVGPSGDEPHD EVPSGGVDASPSVADEPSVSVVGKTS H KT+A GDDGVVA PSLPGGVSTSVGGDA PDAV ASGEVS LP GSGAT SAPEGS E V+PVSPGVDTES XXXXXXXXXXXXXXXXXXXXXX ATSGNSVAEAPAPG GS PEVSD SAVP S VS AGEGVELPG TAVLP VAGGA DDHEPS DSTGQMA IRDTLTTPSS +EV ASDPAAAAA DVP+GDASA +PPDM D EGGDAPPVAGLAAAS D GDD+VP GGAGDLSALHGSD TQP EI VLPSVASSSPP DDAGEG+M APE G AADSAEPPVDG VP++ASS GVP GVES+DLG+ PDA T T PA VPGLPS D XXXXXXXXXXXX EIPASVGG D SS AAG VLG PPSAAEVPFSGD PPLSV I EKGVAE GGGGDAS ATAA LDLG AA +NDAV AGQSN QPDDAERQTPLVD GLAAT APSSASKKGKK+KFG R PSFL+KSKSS SEVPASDASGGV SSAGDT XXXXXXXXXXX SS QS+ GDPT EEGASTGASAEAKKPKRGLFGGLSLKK SSSKGK KLEVPEVAS +VLAV DTG SLPQAPE VAE T A DVSV PDGG+ASLPEASG L VPGT EA GD+ P G VS XXXXXXXXXXXXXXXXXXXXXXX +P+ IG +P SGD ++ PD+ XXXXXXXXXXXXXXXXXXX ISASL S XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX + +P + XXXXXXXXXXXXXXXXXXXX P S XXXXXXXXXXXXXXXXXXXX S+PD XXXXXXXXX S+TGVSGTTAAEPG D AAVSGVS SASP VSG+ PVPDLTDXXXXXXXXXXXXXXADLSVP+TS+DEQPSAAE+ +P + VVGEVSE+ DDGA LA + AAA TGAAV AGLSE ENGEKLGPTS+VV+ SGDPA + D VPPV AVVPAEPSATSIAMGDIP V+ GEAERPSVAVEEE K+EE EE GSA QEGGSPEVVARAPTFTGT IAMGDIPAAGA +AAV SPSA XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX H G AS GQLQGTKGSAAGEGAADAVNQPVEEPTVLP VDGLPEDG+EEE+AAGVTTA +VTGGGAVTVGAL DEEVSMAAGKAG EGDDDS AS R GA ADGS GVSRPALS DDP XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX XXXXXX ADGM LPAASLD EGATAPEA SG XXXXXXXXXXXXXXXXXXAG GVTNP+ DGD AVPPGAA KEQ LAVEEQ AVAAGLEVTHSSPVDDSSA AAAS AVEVTRTARTTVD G D PE S+E+NGG V RLG A EAYVELNKSSSPIASPP GIDGADERGDDMATG G QEGTQESGQGPA+RDS S GLPTGYATGG+PTEESMPS VRRSGTA PPNSARG A+GAGEKDWLDELI+MFSDKCSTCVVDDA
Sbjct: 9 ARVQIPDSASNTELDRRQWLKQQSKSRRRRQQRGSVSRSSYDSDASSLAGDDSDTCSVASTSSRLSIVSTPEISGRKWQTRKQXXXXXXXXXXX--SNSLRSSLGRPAATPLVGSPGSSVSGGG---------SRRSSWSTASMSAVGTRPRGTLTRTNSSSSLSSELSMTLLRWCAVCEGEFTQLRRPHRCRRCLEPVCAPCSPARLPVPGAGSLELKRTCKLCVGDDAAAAPRVGAATPSRRPKAVGAXXXXXXXXXXXXXXXXXXXXXXXXXXVGILSKPVYADTAGLNPAAAAASSPGPADKVAGAA-VEPGEVEGVSGTGGGGGSERGIPAASXXXXXXXXXXX-EPKPQARGGSTPRSRFGILSRVASVVTAGLYPAAASSPPSPAGKAGETAA------VEPEAVGVSGKDGGDGSESGMPAAXX-------------------------------------XXXXXXXXXXXXXXXXXEASVGVVAGNDSGGETGANAGMDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX---XXLAPKGDDYGAGAAAGTPGAAGSPPAVA--AGELDTAGSSPIAPTEENGAADAERRGVSLRLPPTALGSRSQAA-EPTASDPLHEIFAPRENSGAYADAMEEEVEMXXXXXTVALE-----LRAAGGEGPAATAAVASEATEAGKPAGTGLAAXXXAIAEDVVVAGVDGAENASTMTAPPADAVDGEPVNVGIA-EELGDGAVAGVSSPPPVDVNVFAPLADSDVVPSKSAGALGADGAASVDPAVGVDDAPPPDPTSAASVPDEASSELGGGASGEHLLPVAVANAGVGGAADVALLGANGAAAVVGPSGDEPHDVEVPSGGVDASPSVADEPSVSVVGKTSPHRKTQALGDDGVVAPPSLPGGVSTSVGGDAPPDAVGASGEVSALPHGSGATRSAPEGSITEVVIPVSPGVDTESPXXXXXXXXXXXXXXXXXXXXXXAGLDATSGNSVAEAPAPGVGSVPEVSDYSAVPPDSSVSSAGEGVELPGETAVLPEHVAGGAVDDHEPSADSTGQMAAIRDTLTTPSSVVEVSASDPAAAAAADVPSGDASATMPPDMNDVEGGDAPPVAGLAAASSDAAAVGDDKVPREGGAGDLSALHGSDGTQPXXXXXEIPVLPSVASSSPPDHDDAGEGEMPAPENGXXXXXXXXXXXXXXXXXXXXAADSAEPPVDGDVPMTASSLGVP-GVESNDLGSTPDAASSATGTAPAPVPGLPSDDAXXXXXXXXXXXXXNEIPASVGGTDRSSVTAAG-SAVLGPPPSAAEVPFSGDIPPLSVAIREKGVAEVGGGGDASDATAAVLDLGGAA------INDAVAAGQSNDQPDDAERQTPLVDAGLAATFDAPSSASKKGKKSKFGFRTPSFLRKSKSSTSEVPASDASGGVPSSAGDTXXXXXXXXXXXXXXXXXXXXSSAQSVGGDPTTEEGASTGASAEAKKPKRGLFGGLSLKK-SSSKGKSKLEVPEVASPNVLAVSDTGSSLPQAPEPVAEPTSAADVSVVPDGGTASLPEASGGLLVPGTTEASIDGDLPVPRGGVSVPEISAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSMPEGSGDLSXXGATEVSIGGGVPVPSGDASMAPDIXXXXXXXXXXXXXXXXXXXXXXXXXXXXSSDISASLAXXXXXXXXXXXXXXXXXXXXXXXXGGVSVPDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAEASIGTDVPGGDVSVVPDIXXXXXXXXXXXXXXXXXXXXXXXXXPVPSSDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGYLSVPDXXXXXXXXXXXXXXXXXSASITGVSGTTAAEPGADLAAVSGVSSSASPMVSGDPPVPDLTDXXXXXXXXXXXXXXADLSVPKTSDDEQPSAAEIVNPGILVVGEVSELADDGALLAEEIAAAAAA-------TGAAVTAGLSEHENGEKLGPTSAVVKPSGDPAFAADGVPPVLAVVPAEPSATSIAMGDIPTVLRGEAERPSVAVEEE-KMEELEECGSAEQEGGSPEVVARAPTFTGTSIAMGDIPAAGARQAAVGSPSAAVATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--HTGGSAAS---ASAGQLQGTKGSAAGEGAADAVNQPVEEPTVLPLVDGLPEDGAEEEEAAGVTTAXXXXXXXXXXXXXXXXXXXXX-----------XXXXXXXXXXMVTGGGAVTVGALVDEEVSMAAGKAGLEGDDDSLASWR-GAVADGSNDGVSRPALSDDDPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX----------------------------------------------XXXXXXSADGMPLPAASLDGEGATAPEALSGSRXXXXXXXXXXXXXXXXXXAGRGVTNPILNDGDSAVPPGAADKEQHA---LAVEEQSAVAAGLEVTHSSPVDDSSAHNAAASAAVEVTRTARTTVDEEGGDLTPEISIEKNGGDGAEESAAAAPAA--------VGPARLGYSAGEAYVELNKSSSPIASPPHGIDGADERGDDMATGAGAQEGTQESGQGPANRDSVSP-GLPTGYATGGYPTEESMPSPSANQVPSTSQVRADVGGGIDGRAPAVTPPSAGGTVREPVRRSGTAAPPNSARGVASGAGEKDWLDELIDMFSDKCSTCVVDDA 2634
BLAST of mRNA_E-siliculosus-1a_F_contig1194.1233.1 vs. uniprot
Match: D8LGV1_ECTSI (FYVE, RhoGEF and PH domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LGV1_ECTSI) HSP 1 Score: 1358 bits (3514), Expect = 0.000e+0 Identity = 1029/1268 (81.15%), Postives = 1050/1268 (82.81%), Query Frame = 3
Query: 78 MSVEELQSIGSGDDRSRESSLASLADDLTKRSSVHHRLGFGLDRALAHLHGKLDGDGVPTAASPAAASNESGGSQFLSTAAATASGAASGFGSFRVPIQKENDSADRKLSSLAEGAGDAEDDRGQQGQPLAAAAVSDAPILQARVQIPDSASNTELDRRQWLKQQSKSRRRRQQRGSVSRSSYNSDASSLAGDDSDTXXVASTSSRLSIVSTPEISGRKWQTRQXXXXXXXXXXXQRRSNSLRSSLGRPAATPMVGSPGSSVSGXXXXXXXXXXXSRRSSWSTASMSAVGTRPRGTLTRTNSSSSLSSELSMTLLRWCAVCEAEFTQLRRPHRCRRCLEPVCAPCSPARLPVPGAGSLELKRTCKLCVRDDAAAAPRVGAATPSRRPKAVGKAAAPSPRVARITKRRSASMGSAARAPVGILSKPVYVDTAGLNPAAAAASSPGPA--DKAAGAAAVEPGEVVGVSGTGGXXXGESGTPAXXXXXXXXXXXXTPEPKPQASGGGTPRSRFGVLSRVASVVTAGLYPAAASSSPSPAGKAGDTAAAGDAAAIEPKAEASMDVDGGDAGKSGMPAASSPGPGDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKGGGESGANAGTDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRAASPLEGDRPAAPPQPLAPKGDDYGAGAAAGTRGAAGSPPXXXXXAGE-LVTAGSSPVAP-EENGAADAEGRGVSLRLPPTAPGSRSQAAAEPTASDPLHEIFAPRENSGAYADAMEEXXXXXXXXXXXXXXXXXXXLRAAGGESPAASAAAASEATEDGMPAVTGLAAA--------VAGVDGPVNASVVTAPP-ADAVDGEPATVGVAAEELGDAAVAGVSSPPPVDVDVRAPLADSDVVPSIGAGALGESHDAPPADPKSAASVPNEASSMLGRGASGEDLLPVAVANAGVGGAADVALLGANGAAAVVGPSGDEPHDFEVPSGGVDASPSVADEPSVSVVGKTSSHGKTEASGDDGVVAAPSLPGGVSTSVGG-DALPDAVVASGEVSVLPDGSGATGSAPEGSTAEAVMPVSPGVDTESXXXXXXXXXXXXXXXXXXXXXXXXXXXATSGNSVAEAPAPGGGSAPEVSDDSAVPSASGVSGAGEGVELPGGTAVLPVDVAGGADDDHEPSVDSTGQMATIRDTLTTPSSAIEVCASDPA----AAAADVPAGDASAILPPDMGDAEGGDAPPVAGLAAAS 3827
MSVEELQSIGSGDDRSRESSLASLADDLTKRSSVHHRLGFGLDRALAHLHGKLDGDGVPTAASPAAA+NESGGSQFLSTAAATASGAASGFGSFRVPIQKENDSADRKLSSLAEGAGDAEDDRGQQGQP AAA VSDAPILQARVQIPDSASNTELDRRQWLKQQSKSRRRRQQRGSVSRSSY+S+ SSLAGDDSDT VASTSSRLSIVSTPEISGRKW+TRQXXXXXXXXXXX +GRPAATP+VG XXXXXXXXXXX RSSWSTASMSAVGTRPRGTLTRTNSSSSLSSELSMTLLRWCAVCEAEFTQLRRPHRCRRCLEPVCAPCSPARLPVPGAGSLELKRTCKLCV DDAAAAP VGAA PSRRP AVG AAAPSPRVARITKRRSASMGSAARAPVGILSKPVYVDTAGLNPAAA DKAA AVEP E VGVSG XXX ESGTPA TPEPKPQASGG TPRSRFGVLSRVASVVTAGLYPAAASSSPSPAGKAGDTAA +EP+A + D GD +SGMPA XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX K GGESG NAGTDXXXXXXXXXXXXXXXXXXXXXXXXXXXXX LAPKGDDYGA AGT G XXXXX L SSPVAP EE+GAADA GRGVSLRLPPTAPGSRSQA EPTASDPLHEIFAPRENSGAYADAMEEXXXXXXXXXX LRAAGGE PAASAA ASEA EDG PA T VAGVDG NAS VTA P ADAVD EP TVG+AAEELGD+AVAGVSSPPPVDVDV APLADSDVVPSIGA AL + A DP S AS P+EASS LG GASGED LPVAVA+AGVGG ADVALLGANGAA VVGPSGDEPHD EVPSGGVDASPSVADEPSVSVVGK S HGKTEA GDDGVVA PSLPGGVSTSVGG DALPDAVVASGEVS LPDGSGATGSAPEGSTAE V+PV+PGVDTE XXXXXXXXXXXXXX ATSGNSV EAPAPGGGSAPEVSDDSAVP ASGVSGAGEGVELPGGTAVLPVDV+GG DD+HEPSVDST QMA IRDTLTTPSS IEV SDPA AAAADVP GDA A +PP M D EGGDAPPVAGLAAAS
Sbjct: 1 MSVEELQSIGSGDDRSRESSLASLADDLTKRSSVHHRLGFGLDRALAHLHGKLDGDGVPTAASPAAAANESGGSQFLSTAAATASGAASGFGSFRVPIQKENDSADRKLSSLAEGAGDAEDDRGQQGQPPAAA-VSDAPILQARVQIPDSASNTELDRRQWLKQQSKSRRRRQQRGSVSRSSYDSEVSSLAGDDSDTSSVASTSSRLSIVSTPEISGRKWKTRQXXXXXXXXXXXXXXXXXX---VGRPAATPVVGXXXXXXXXXXXXXXXXXXXXXRSSWSTASMSAVGTRPRGTLTRTNSSSSLSSELSMTLLRWCAVCEAEFTQLRRPHRCRRCLEPVCAPCSPARLPVPGAGSLELKRTCKLCVGDDAAAAPLVGAAAPSRRPNAVGAAAAPSPRVARITKRRSASMGSAARAPVGILSKPVYVDTAGLNPAAAXXXXXXXXXXDKAA-XXAVEPEEAVGVSGXXXXXXSESGTPAASFVPTGKARG-TPEPKPQASGGSTPRSRFGVLSRVASVVTAGLYPAAASSSPSPAGKAGDTAA------VEPEAVGVVGKDRGDGSESGMPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSGKDGGESGDNAGTDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--XLLAPKGDDYGASETAGTPGXXXXXXXXXXXXXXXLXXXXSSPVAPPEEDGAADAGGRGVSLRLPPTAPGSRSQAV-EPTASDPLHEIFAPRENSGAYADAMEEXXXXXXXXXXLALE-----LRAAGGEGPAASAAVASEAAEDGKPAGTXXXXXXXXXXXXXVAGVDGAENASTVTAAPLADAVDSEPITVGIAAEELGDSAVAGVSSPPPVDVDVHAPLADSDVVPSIGARALAGADGAASVDPTSGASGPDEASSELGGGASGEDSLPVAVADAGVGGTADVALLGANGAAPVVGPSGDEPHDVEVPSGGVDASPSVADEPSVSVVGKASPHGKTEALGDDGVVAPPSLPGGVSTSVGGGDALPDAVVASGEVSALPDGSGATGSAPEGSTAEVVIPVTPGVDTEXXXXXXXXXXXXXXXVSASPAAVAASLDATSGNSVTEAPAPGGGSAPEVSDDSAVPPASGVSGAGEGVELPGGTAVLPVDVSGGDDDNHEPSVDSTSQMAAIRDTLTTPSSVIEVSTSDPATAAAAAAADVPPGDAIATMPPGMSDVEGGDAPPVAGLAAAS 1248
BLAST of mRNA_E-siliculosus-1a_F_contig1194.1233.1 vs. uniprot
Match: D8LGV2_ECTSI (Similar to AHNAK nucleoprotein isoform 1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LGV2_ECTSI) HSP 1 Score: 988 bits (2553), Expect = 0.000e+0 Identity = 994/1685 (58.99%), Postives = 1031/1685 (61.19%), Query Frame = 3
Query: 3993 MSAPETGDAPVRDTAGGGGGVVPLPDTAADSAEPPVDGGVPISASSSGVPAGVESDDLGN-PDA----TVTVPASVPGLPSVDXXXXXXXXXXXXXGKEIPASVGGADGSSAAAAGGRVVLGAPPS-----AAEVPFSGDTPPLSVPISEKGVAEGGGGG---DASVATAAGLDLGVAAAAVSGAVNDAVGAGQSNGQPDDAERQTPLVDVGLAATSGAPSSASKKGKKNKFGLRKPSFLKKSKSSVSEVPASDASGGVSSSAGDTPLSSVSLEXXXXXXXXXXXSSSTQSMSGDPTPEEGASTGASAEAKKPKRGLFGGLSLKKKSSSKGKGKLEVPEVASSDVLAVPDTGGSLPQAPESVAETTCAVDVSVPDGGSASLPEASGDLSVPGTEEAPTGGDVRAPSGDVSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDGPVPDIGASLPEESGDVAVPDLAXXXXXXXXXXXXXXXXXXXISASLPEASGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-----------------------------------------------------------------------------------------------------------------SVPETSXXXXXXXXXXX--------------------IPALAXXXXXXXXXXXXXXXXXXXXSASWPEASGKLSXXXXXXXXXXXXXXXXXXXXS-----------MPDTSASPPEDXXXXXXXXXXXSLTGVSGTTAAEPGTDFAAVSGVSPSASPKVSGNLPVPDLTDXXXXXXXXXXXXXX-ADLSVPRTSEDEQPSAAEVADPSVSVVGEVSEVDDGAPLAGDEAAAXXXXXXXXXXTGAAVPAGLSEPENGEKLGPTSSVVETSGDPALSGDDVPPVSAVVPAEPSATSIAMGDIPMVVGGEA--ERPSVAVEEEEKIEETEEGGSAGQEGGSPEVVARAPTFTGTGIAMGDIPAAGAGEAAVESPSAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDHIGXXXXXXXXASGGQLQGTKGSAAGEGAADAVNQPVEEPTVLPPVDGLPEDGSEEEQAAGVTTADGTPASAA-VDIVAAAEAVDKVAVGGTADNVADNMAAAAADQAVVTGGGAVTVGALADEEVSMAAGKAGPEGDDDSPASSRAGAAAD----GSEGGVSRPALSVDDPRSTAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDVDPQPPVAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGADG-MLLPAASLDDEGATAPEAFSGXXXXXXXXXXXXXXXXXXXXAGGGVTNPVPTDGDFAVPPGAACKEQQPQQPLAVEEQLAVAAGLEVTHSSPVDD-SSADGAAASVAVEVTRTARTTVDGGGADKAPETSVERNGGXXXXXXXXXXXXXXXXXXXXXVASERLGDGAEEAYVELNKSSSPIASPPQGIDGADERGDDMATGTGVQEGTQESGQGPADRDSASLHGLPTGYATGGHPTEESMPS----------------------------------------VRRSGTAVPPNSARGAAAGAGEKDWLDELIEMFSDKCSTCVVDDAS 8426
MSAPETGDA V DTAG AADSAEPPVDGGVPI+ASSSGVPA VES+DLG+ PDA T T PASV GL XXXXXXXXXXXXX EI ASVGGADGS AAEVPFSGDTPPLSV I EKGVAEGG DAS+ATAAGLDLG AAAAVSGAVNDAVGAGQSNGQPDDAERQTPLVD GLAATS APSSASKKGKK+KFGLRKPSFLK++KSS SEVPASDASGGV SSAGDTPLSS SLE SSS QS+ GDPT EEG STGASAEAKKPKRGLFGGLSLKKKSSSKGKGKLEVPEVA DVLAV DTGGSLPQAPESVAE AVDVSVPDGGSASLPE+SGDLSVPGT+EAPT GDVRAP GDV XXXXXXXXXXXXXXXXXXXXXXXXXXX ++ ASLPEESGDVAVPDL XXXXXXXXXXXXXXXXXXX S+PEASG XXXXXXXXXXXXXXXXXXXXX XXXXXXXXXXXXXXXXXXXXXXXXX SV +TSXXXXXXXXXXX +P XXXXXXXXXXXXXXXXXXXX P S XXXXXXXXXXXXXXXXXXXX +PD S XXXXXXX SLTGVSGTTA EPGTD+A VSGV PSASPK SG+LPVPDLTD XXXXXXX ADLSVP+TS+D QPSAA+VAD SVSVVGEVSE+DDGAPLAGDEAAA XXX TGAA AGL EPEN EKLGPTS+VVETSGDPALSGDDVPPVSAVVPAEPSATSIAMGDIP VGGE E PS A EEK EE E +GG PE GSAA EGAADAVNQPVEEPTVLP VDGLPEDG+EE + AGVTTADGTPASAA VDIV +A DNMAAA DQAVVT GGAVTVGALA+EE SMAAGKAG EGDD S AS GSEGGVSRPALSVDDPRSTAAXXXXXX ADG LP EGATAPEAFSG AGGGV +PVPTDGDFAVPPGAA KE+QP LAVEEQ AVAA LEVTHSSPVDD +SAD AAASVAVEVTRTARTTVDGGG D PE SVER XXXXXXXXXXXXXXXXXVASERLG+G EA VEL+KSSSP+ASPPQGIDGADERGDDMATGTG+QEGTQESGQG A+RDSAS GLPTGYATGGHPTEESMPS VRR+GTAVPPNSAR AAAGAGEKDWLDELIEM SDKC TC VDDAS
Sbjct: 1 MSAPETGDASVPDTAGXXXXXXXXXXXAADSAEPPVDGGVPITASSSGVPADVESNDLGSTPDASSSATGTAPASVSGLXXXXXXXXXXXXXXXXXXNEISASVGGADGSXXXXXXXXXXXXXXXXXXXXXAAEVPFSGDTPPLSVAIPEKGVAEGGXXXXXXDASIATAAGLDLGDAAAAVSGAVNDAVGAGQSNGQPDDAERQTPLVDAGLAATSDAPSSASKKGKKSKFGLRKPSFLKRTKSSTSEVPASDASGGVLSSAGDTPLSSASLETPSGYVHASTPSSSAQSVVGDPTTEEGTSTGASAEAKKPKRGLFGGLSLKKKSSSKGKGKLEVPEVALPDVLAVADTGGSLPQAPESVAEPISAVDVSVPDGGSASLPESSGDLSVPGTKEAPTDGDVRAPRGDVGVPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEMSASLPEESGDVAVPDLVXXXXXXXXXXXXXXXXXXXXGVSVPEASGDXXXXXXXXXXXXXXXXXXXXXVSVAPDVSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMSASLPXXXXXXXXXXXXXXXXXXXXXXXXXXXSAPDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXASVVPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVSVLDTSXXXXXXXXXXXXXXXXXXXXXXDVAGGDFSVVPDXXXXXXXXXXXXXXXXXXXXXXXXXLPVPSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGDLPVPDMSXXXXXXXXXXXXXGTTASLTGVSGTTANEPGTDYATVSGVRPSASPKASGDLPVPDLTDSSPPPGIXXXXXXXXADLSVPQTSDDAQPSAADVADRSVSVVGEVSELDDGAPLAGDEAAAAXXX------TGAAATAGLFEPENVEKLGPTSAVVETSGDPALSGDDVPPVSAVVPAEPSATSIAMGDIPTAVGGEVAVESPSAAAAIEEKKEEGLE------KGGPPE--------------------------------------------------------------------------------------------------------GSAAEEGAADAVNQPVEEPTVLPLVDGLPEDGAEEAEVAGVTTADGTPASAAAVDIVESAXXXXXXXXXXXXXXXXDNMAAA--DQAVVTRGGAVTVGALANEEFSMAAGKAGLEGDDGSLASXXXXXXXXXXXXGSEGGVSRPALSVDDPRSTAAXXXXXXV-------------------------------------------------------------------------------------ADGDSPLPLTGACGEGATAPEAFSGRSSGSTDELLMPAASLDEEGAGGGVNDPVPTDGDFAVPPGAAGKERQP---LAVEEQSAVAAVLEVTHSSPVDDWTSADNAAASVAVEVTRTARTTVDGGGGDSTPEVSVERX------XXXXXXXXXXXXXXXXXVASERLGNGTGEACVELDKSSSPVASPPQGIDGADERGDDMATGTGMQEGTQESGQGAAERDSASP-GLPTGYATGGHPTEESMPSPSANQVPSTPQVRADVIGGGIGGRAPAVPPPSAGGTVREPVRRTGTAVPPNSAREAAAGAGEKDWLDELIEMISDKCLTCAVDDAS 1472
BLAST of mRNA_E-siliculosus-1a_F_contig1194.1233.1 vs. uniprot
Match: A0A6H5JGB5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JGB5_9PHAE) HSP 1 Score: 243 bits (621), Expect = 1.580e-70 Identity = 137/147 (93.20%), Postives = 138/147 (93.88%), Query Frame = 3
Query: 78 MSVEELQSIGSGDDRSRESSLASLADDLTKRSSVHHRLGFGLDRALAHLHGKLDGDGVPTAASPAAASNESGGSQFLSTAAATASGAASGFGSFRVPIQKENDSADRKLSSLAEGAGDAEDDRGQQGQPLAAAAVSDAPILQARVQI 518
MSVEELQSIGSGDDRSR+SSLASLADDLTKRSSV HRLGFGLDRALAHLHGKLDGDGVPTAASP AA NESGGSQFLSTAAATASGAASGFGSFRVP QKENDSADRKLSSLAEGAGDAEDD QQGQPLAAAAVSDAPILQ V I
Sbjct: 1 MSVEELQSIGSGDDRSRQSSLASLADDLTKRSSVGHRLGFGLDRALAHLHGKLDGDGVPTAASPTAAGNESGGSQFLSTAAATASGAASGFGSFRVPFQKENDSADRKLSSLAEGAGDAEDDHRQQGQPLAAAAVSDAPILQVGVMI 147
BLAST of mRNA_E-siliculosus-1a_F_contig1194.1233.1 vs. uniprot
Match: A0A6H5JMZ6_9PHAE (FYVE-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JMZ6_9PHAE) HSP 1 Score: 127 bits (320), Expect = 2.380e-25 Identity = 111/261 (42.53%), Postives = 137/261 (52.49%), Query Frame = 3
Query: 483 SDAPILQARVQIPDSASNTELDRRQWLKQQSKSRRRRQQR---------------------------GSVSRSSYNSDASSLAGDDSDTXXVASTSSRLSIVSTPEISGRKWQTRQXXXXXXXXXXXQRRSNSLRSSLGRPAATPMVGSPGSSVSGXXXXXXXXXXXSRRSSWSTASMSAVGTRPRGTLTRTNSSSSLSSELSMTLL--RWCAVCEAEFTQLRRPHRCRRCLEPVCAPCSPARLPVPGAGSLELKRTCKLC 1178
SDAP+LQARV+IP+SA+ DRR+WLKQ S+SRRR+Q S R S SS+AG +SDT V +SRLS VSTPEIS R+ + Q QR + PA+ + GSP +RRS P G++TR++SS+S S S L + C VCEAEFT+LRRPHRCRRC+E VCA CSP RLPVPG+GSLE KRTC+LC
Sbjct: 35 SDAPLLQARVRIPESAT----DRREWLKQHSQSRRRQQPSPGSGLKTPHDGRRRPSSRFRPHAHAASNSEFRERTTSRDSSVAGGESDTSSV---NSRLSTVSTPEISQRQRKMLQ-----------QRHQQVVG-----PAS--VAGSP---------------DRTRRSRV-----------PHGSITRSSSSASTSVVSSAPSLSQQSCGVCEAEFTRLRRPHRCRRCMEAVCASCSPLRLPVPGSGSLEPKRTCRLC 244
BLAST of mRNA_E-siliculosus-1a_F_contig1194.1233.1 vs. uniprot
Match: D8LNU4_ECTSI (FYVE-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LNU4_ECTSI) HSP 1 Score: 100 bits (248), Expect = 4.730e-17 Identity = 51/77 (66.23%), Postives = 61/77 (79.22%), Query Frame = 3
Query: 954 PRGTLTRTNSSSSLSSELSMTLL--RWCAVCEAEFTQLRRPHRCRRCLEPVCAPCSPARLPVPGAGSLELKRTCKLC 1178
P G++TR++SS+S S S L + C VCEAEFT+LRRPHRCRRC+E VCA CSP RLPVPG+GSLE KRTC+LC
Sbjct: 28 PHGSITRSSSSASTSVASSAPSLSQQSCGVCEAEFTRLRRPHRCRRCMEAVCASCSPLRLPVPGSGSLEPKRTCRLC 104
BLAST of mRNA_E-siliculosus-1a_F_contig1194.1233.1 vs. uniprot
Match: A0A6H5KYW1_9PHAE (FYVE-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KYW1_9PHAE) HSP 1 Score: 67.4 bits (163), Expect = 5.160e-7 Identity = 33/55 (60.00%), Postives = 35/55 (63.64%), Query Frame = 3
Query: 1029 CAVCEAEFTQLRRPHRCRRCLEPVCAPCSPARLPVPGAGSLELKRTCKLCVRDDA 1193
C VC AEFT+ RRPHRCR C + VCA CSPARLP KRTCK C D A
Sbjct: 173 CGVCRAEFTRYRRPHRCRACSKVVCATCSPARLP---------KRTCKPCAGDSA 218 The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig1194.1233.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90) Total hits: 7
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-siliculosus-1a_F_contig1194.1233.1 >prot_E-siliculosus-1a_F_contig1194.1233.1 ID=prot_E-siliculosus-1a_F_contig1194.1233.1|Name=mRNA_E-siliculosus-1a_F_contig1194.1233.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=2784bp MSVEELQSIGSGDDRSRESSLASLADDLTKRSSVHHRLGFGLDRALAHLHback to top mRNA from alignment at E-siliculosus-1a_F_contig1194:4006..20789+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-siliculosus-1a_F_contig1194.1233.1 ID=mRNA_E-siliculosus-1a_F_contig1194.1233.1|Name=mRNA_E-siliculosus-1a_F_contig1194.1233.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=16784bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1194:4006..20789+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top Coding sequence (CDS) from alignment at E-siliculosus-1a_F_contig1194:4006..20789+ >mRNA_E-siliculosus-1a_F_contig1194.1233.1 ID=mRNA_E-siliculosus-1a_F_contig1194.1233.1|Name=mRNA_E-siliculosus-1a_F_contig1194.1233.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=16704bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1194:4006..20789+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top |