mRNA_E-siliculosus-1a_F_contig1193.1231.1 (mRNA) Ectocarpus siliculosus Ec863f_EcPH12_90f female
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Overview
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig1193.1231.1 vs. uniprot
Match: D7FHG2_ECTSI (Cyclin D2 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHG2_ECTSI) HSP 1 Score: 1640 bits (4248), Expect = 0.000e+0 Identity = 852/949 (89.78%), Postives = 877/949 (92.41%), Query Frame = 1
Query: 1 MTSPQAGWRRSPDPVFTTPRAASEVSSWRNRRPVAVNENYPGVSNLEPWLDEIIGVSSNSRNTRAAAPGPAIAATPASCRRVLANAWASFERADPARDTPPRGTSQATGLSLFALDPVLAETRETLQPERANFVQPSSEHPRRPPTPPTRPPAAEPLQGAIALSTEEADSMLAHTFLKQERQSDNVRMGFQMLRGRQPQLFSTFTSGIIDMAIGLTAGAGVVPSHPVAADTVALAIINLARFVATTAEEGIANDDRDLLPLVCLFMAQKLEENGSDNILAAMLAMRNVWEPDHTATKKRVAKLEAKVCASLKWALYAVTPTTFGHLFLARALSEGALAGGQSQVRELTTVTSLRWVQLGYLSEFKPSELAAAAMFCAVLRECDFQAARQVTEVARSGVVDLESSRFWVLYREEDSHNAVPTIMDAIDAAGVGMGADDRGTDAAQRYIDGGADKTEGGGTAYGCNDSDTEGPTPPPTREPGEALEAFFADDQQVSRAVSSGGNTSSSNRQDMGEPENGSGKSTTSSARSIMGERTPCTTGEMTAPSREFARASRFSPILLDDRYTATMSTGASPCPSEHTLGVLGHARGSGVEISAGTPPSAGFVTLTTGSTQQAAVRISPSQAQAEPDVRGATARMRSVGLNEGPLEIIGGDAGGSDDISDDNDTLGLPQVDVMPRNNSTNEVAEWDVGAEMTMEEAGELLLQQRPHLVPAPAMVDGGHSHLAPGLSHVEPRDGDTEMKWERAAMRRLDDGVKAFQRQEKRQGVAPLVFWGEGGVLLPVVPPAQVDARTSPPAVDSNSTDDTIEWEREVERQLEEAGKLLRQQNLHLVTAVAVGSHTLLRPGDVYPPLFHANGNQDDAPASQHTTTATXXXXXXXXXXXXALLRPDAFTGAFQCQEEGNADSAPPGSSRRTFYPLLFHTNGSQDDASASQHTAATALLRPDAFAGEFQS 2847
MTSPQAGWRRSPDPVFTTPRAASEVS WRNR PVAVNENYPGVSNLEPWLDEIIGVSS+ RNTRAAAPGPAI ATPASCRRVLANAWASFERADPARDT PRGTSQAT LSLFAL+PVLAETRETLQPERAN VQPSSEH RRPPTPP R PAAEPLQGAIALSTEEADSMLAHTFLKQERQSDNV MGF MLRGRQPQLFS FTSGI+D+A GLTAGAGV PSHPVAADTVALAIINLARFVATTAEEGIA+D+RDLLPLVCL MAQKLE+NG D++L+AML + NV +PDHTATKKRVA+LEAKVCASLKWALYAVTPTTFGHLFLARALSEGALAGGQSQVRELTTVTSLRWVQLGYLSEFKPSELAAAAMFCAVLRE DFQ ARQV E RSGVVDLESSRFW LYREEDSHNAVPTIMDAIDAAGVGMGADDRGT AAQRYIDG ADK EG GTAYGCNDSDTEGPTPPPTREPGEALEAFF DDQQVSRAVS GNTSS +RQDM EPENGSGKSTT SARSI+GERTPCTTG MTAPSREFA AS FSPILLDDRYT MS GASP PSEHTLGVLGH RGS VEISAGTPPSAGFVTLTTGSTQ AAVRISPSQAQA+PDV GATAR++SVGLNEGP EIIGGD GGSDD+SDDN+TLGLPQV+V+P NNSTNEVAEWDVG EMTMEEAGELLLQQRPHLVPAPAMVDGG+SHLAPGLSHVEPRDGDTEM+WERAAMRRLDDGVKAFQRQEKRQGVAPLVFWGEGGVLLPVVPPAQVDARTSPPAVDSNSTDDTIEW+REVERQLEEAGKLLRQQNLHLVTAVAVGSH LLRP DVYPPLFH NGNQDDAPASQH T ALLRPDAFTGAFQCQEEGNADSAPPGSSRRTFYPLLFHTNGSQDDA ASQHT ATALLRPDAFAGEFQS
Sbjct: 1 MTSPQAGWRRSPDPVFTTPRAASEVSLWRNRLPVAVNENYPGVSNLEPWLDEIIGVSSDRRNTRAAAPGPAITATPASCRRVLANAWASFERADPARDTTPRGTSQATALSLFALNPVLAETRETLQPERANLVQPSSEHSRRPPTPPARQPAAEPLQGAIALSTEEADSMLAHTFLKQERQSDNVLMGFYMLRGRQPQLFSAFTSGIVDIATGLTAGAGVAPSHPVAADTVALAIINLARFVATTAEEGIADDNRDLLPLVCLLMAQKLEDNGPDSLLSAMLTVCNVGDPDHTATKKRVARLEAKVCASLKWALYAVTPTTFGHLFLARALSEGALAGGQSQVRELTTVTSLRWVQLGYLSEFKPSELAAAAMFCAVLRERDFQEARQVNEATRSGVVDLESSRFWGLYREEDSHNAVPTIMDAIDAAGVGMGADDRGTGAAQRYIDGAADKDEGSGTAYGCNDSDTEGPTPPPTREPGEALEAFFTDDQQVSRAVSRSGNTSSPDRQDMDEPENGSGKSTTCSARSIIGERTPCTTGGMTAPSREFATASHFSPILLDDRYTTAMSAGASPSPSEHTLGVLGHDRGSDVEISAGTPPSAGFVTLTTGSTQPAAVRISPSQAQADPDVPGATARIKSVGLNEGPFEIIGGDDGGSDDVSDDNNTLGLPQVEVIPGNNSTNEVAEWDVGVEMTMEEAGELLLQQRPHLVPAPAMVDGGYSHLAPGLSHVEPRDGDTEMRWERAAMRRLDDGVKAFQRQEKRQGVAPLVFWGEGGVLLPVVPPAQVDARTSPPAVDSNSTDDTIEWKREVERQLEEAGKLLRQQNLHLVTAVAVGSHALLRPEDVYPPLFHTNGNQDDAPASQHAATT-------------ALLRPDAFTGAFQCQEEGNADSAPPGSSRRTFYPLLFHTNGSQDDAPASQHTTATALLRPDAFAGEFQS 936
BLAST of mRNA_E-siliculosus-1a_F_contig1193.1231.1 vs. uniprot
Match: A0A6H5L9D3_9PHAE (Cyclin N-terminal domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L9D3_9PHAE) HSP 1 Score: 1521 bits (3937), Expect = 0.000e+0 Identity = 822/1044 (78.74%), Postives = 847/1044 (81.13%), Query Frame = 1
Query: 1 MTSPQAGWRRSPDPVFTTPRAASEVSSWRNRRPVAVNENYPGVSNLEPWLDEIIGVSSNSRNTRAAAPGPAIAATPASCRRVLANAWASFERADPARDTPPRGTSQATGLSLFALDPVLAETRETLQPERANFVQPSSEHPRRPPTPPTRPPAAEPLQGAIALSTEEADSMLAHTFLKQERQSDNVRMGFQMLRGRQPQLFSTFTSGIIDMAIGLTAGAGVVPSHPVAADTVALAIINLARFVATTAEEGIANDDRDLLPLVCLFMAQKLEENGSDNILAAMLAMRNVWEPDHTATKKRVAKLEAKVCASLKWALYAVTPTTFGHLFLARALSEGALAGGQSQVRELTTVTSLRWVQLGYLSEFKPSELAAAAMFCAVLRECDFQAARQVTEVARSGVVDLESSRFWVLYREEDSHNAVPTIMDAIDAAGVGMGADDRGTDAAQRYIDGGADKTEGGGTAYGCNDSDTEGPTPPPTREPGEALEAFFADDQQVSRAVSSGGNTSSSNRQDMGEPENGSGKSTTSSARSIMGERTPCTTGEMTAPSREFARASRFSPILLDDRYTATMSTGAS-------------------------------------------PC-----------PSEHTLGVLGHARGSGVEISAGTPPSAGFVTLTTGSTQQAAVRISPSQAQAEPDVRGATARMRSVGLNEGPLEIIGGDAGGSDDISDDNDTLGLPQVDVMPRNNSTNEVAEWDVGAEMTMEEAGELLLQQRPHLVPAPAMVDGGHSHLAPGLSHVEPRDGDTEMKWERAAMRRLDDGVKAFQRQEKRQGVAPLVFWGEGGVLLPVVPPAQVDARTSPPAVDSNSTDDTIEWEREVERQLEEAGKLLRQQNLHLVTAVAVGSHTLLRPGDVYPPLFHANGNQDDAPASQHTTTA-----------------------------------------TXXXXXXXXXXXXALLRPDAFTGAFQCQEEGNADSAPPGSSRRTFYPLLFHTNGSQDDASASQHTAATALLRPDAFAGEFQS 2847
MTSPQAGWRRSP VFTTPR ASEVSSWRNRRPVAVNENYPGVSNLEPWLDEIIGVSSN RNTRAAAPGPA ATPASCRRVLANAWASFERA+ +RDT PRGTS A GLSLFALDPVLAETRETL+PERANFVQPSSEHPRRPPTPPTRPPA EPLQGA ALSTEEADSMLAHTFLKQ+RQ DNVR+GFQMLRG QPQLFSTFTSGIIDMAIGLTAGA +VPSHPVAADTVALAIINLARFVATTAEEGIA+DDRDLLPLVCLFMAQKLEENG DNILAAMLAMRNVWEPDHTATKKRVAKLE+KVCASLKWALYAVTPTTFGHLFLARALSEG LAGGQSQVRELT TSLRWVQLGYLSEFKPSELAAAA+FCAVLRECDFQAARQVTE RSGVVDLESSRFWVLYREEDSHNAVPTIMDAI+AAGVGMGADDRGTDAAQ YIDG ADK EGGGTAYGCNDSDTEGPTPPPTREPGEA EAFFAD QQVS SSGG TSSSNRQDM EPE+GSGK +TSSARSI+GERT CTTGEMTAPSREFARASRF P+LLDDRYT MS GAS C SEHTLG+LGHARGS V+ S TPPSA F T T +TQ AA +SPS Q E D GATARM +GLN GPL IIGGDAGGSD ISDDNDTLGLPQVD+MPR NS NEVAEWDV EMTMEEA ELLLQQRPHLVPAPAM GGHSHLAP LSHVEPRDGDTEM+WERAAMRRLDDGVKAFQRQE +QGVAPLVFWGEGGVLLPVVPPAQVDARTSPPA SNSTDD IEWEREVERQLEEAGKLLRQQN HLVTAVAVGS TLLRPG VYPPLFH N +QDDAP SQH T + ALLRPDAFTGAFQCQEE NADSAPPGSSRRTFYPLLFHTNG QDDA ASQHT ATALL +AFAG FQS
Sbjct: 6 MTSPQAGWRRSPGLVFTTPRTASEVSSWRNRRPVAVNENYPGVSNLEPWLDEIIGVSSNRRNTRAAAPGPANTATPASCRRVLANAWASFERANSSRDTTPRGTSHAMGLSLFALDPVLAETRETLRPERANFVQPSSEHPRRPPTPPTRPPAVEPLQGASALSTEEADSMLAHTFLKQDRQFDNVRVGFQMLRGCQPQLFSTFTSGIIDMAIGLTAGASIVPSHPVAADTVALAIINLARFVATTAEEGIADDDRDLLPLVCLFMAQKLEENGPDNILAAMLAMRNVWEPDHTATKKRVAKLESKVCASLKWALYAVTPTTFGHLFLARALSEGTLAGGQSQVRELTAATSLRWVQLGYLSEFKPSELAAAAIFCAVLRECDFQAARQVTEDTRSGVVDLESSRFWVLYREEDSHNAVPTIMDAINAAGVGMGADDRGTDAAQPYIDGAADKAEGGGTAYGCNDSDTEGPTPPPTREPGEAHEAFFADGQQVSLVASSGGYTSSSNRQDMDEPESGSGKISTSSARSIIGERTYCTTGEMTAPSREFARASRFFPMLLDDRYTTAMSAGASLSSSEHTLGILGHARGSDVDTSVVTPPSASFATYTNRNTQPAAACVSPSHGQEXLSSSEHTLGILGHARGSDVDTSVVTPPSASFATYTNRNTQPAAACVSPSHGQEESDPPGATARMPWLGLNVGPLGIIGGDAGGSDGISDDNDTLGLPQVDMMPRTNSINEVAEWDVVVEMTMEEADELLLQQRPHLVPAPAMFGGGHSHLAPDLSHVEPRDGDTEMRWERAAMRRLDDGVKAFQRQENKQGVAPLVFWGEGGVLLPVVPPAQVDARTSPPA--SNSTDDAIEWEREVERQLEEAGKLLRQQNFHLVTAVAVGSCTLLRPGKVYPPLFHTNDHQDDAPTSQHAVTTALLRPDAFAGTFRSQEEGNTDSAPPGLSRRGFYPPPFDTNGSQDDAPASQHAATALLRPDAFTGAFQCQEEVNADSAPPGSSRRTFYPLLFHTNGRQDDAPASQHTTATALLGSNAFAGAFQS 1047
BLAST of mRNA_E-siliculosus-1a_F_contig1193.1231.1 vs. uniprot
Match: A0A6H5JNX6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JNX6_9PHAE) HSP 1 Score: 1105 bits (2858), Expect = 0.000e+0 Identity = 640/942 (67.94%), Postives = 677/942 (71.87%), Query Frame = 1
Query: 1 MTSPQAGWRRSPDPVFTTPRAASEVSSWRNRRPVAVNENYPGVSNLEPWLDEIIGVSSNSRNTRAAAPGPAIAATPASCRRVLANAWASFERADPARDTPPRGTSQATGLSLFALDPVLAETRETLQPERANFVQPSSEHPRRPPTPPTRPPAAEPLQGAIALSTEEADSMLAHTFLKQERQSDNVRMGFQMLRGRQPQLFSTFTSGIIDMAIGLTAGAGVVPSHPVAADTVALAIINLARFVATTAEEGIANDDRDLLPLVCLFMAQKLEENGSDN---ILAAMLAMRNVWEPDHTATKKRVAKLEAKVCASLKWALYAVTPTTFGHLFLARALSEGALAGGQSQVRELTTV--TSLRWVQLGYLSEFKPSELAAAAMFCAVLRECDFQAARQVTEVARSGVVDLESSRFWVLYREEDSHNAVPTIMDAIDAAGVGMGADDRGTDAAQRYIDGGADKTEGGGTAYGCNDSDTEGPTPPPTREPGEALEAFFADDQQVSRAVSSGGNTSSSNRQDMGEPENGSGKSTTSSARSIMGERTPCTTGEMTAPSREFARASRFSPILLDDRYTATMSTGASPCPSEHTLGVLGHARGSGVEISAGTPPSAGFVTLTTGSTQQAAVRISPSQAQAEPDVRGATARMR--------------------------------------------SVGLNEGPLEIIGGDAGGSDDISDDNDTLGLPQVDVMPRNNSTNEVAEWDVGAEMTMEEAGELLLQQRPHLVPAPAMVDGGHSHLAPGLSHVEPRDGDTEMKWERAAMRRLDDGVKAFQRQEKRQGVAPLVFWGEGGVLLPVVPPAQVDARTSPPAVDSNSTDDTIEWEREVERQLEEAGKLLRQQNLHLVTAVAVGSHTLLRPGDVYPPLFHANGNQDDAPASQHTTTATXXXXXXXXXXXXALLRPDAFTGAFQ 2679
MTSPQAG R P AV EN PG L PWLD IIGV+S+SR+TR+AAPGPAI ATPASCRR A +E+ + ATGL LFALDPVL E RETLQPER NFVQPS E PRR PTPP RPPA EPLQGAIAL TEEADSML TFLKQERQSDNVRMGF +LRGRQPQLFSTFTSGIIDMA LTAGA +VPSHPVAADTVALAII LARFVA+TAEEGIA+ RDLL LVCL MAQ LE NGSD+ +LAAMLA+ V KL+ KVCASLKWALYAVTPTTFGHLFLARALSEGAL GG S++ L+ + L V +G + PSELAAAA+FCAVLRE DFQAARQVTEVARSGVVDLESSR GTDA QRYID ADK +GGG AYGCN SDTEGPTPP TREPGEA E FFADDQ VSR+VS GNTSSS+RQD +PENGSGKSTTSS RSI+GERTPCTTG MTAPSREFARASRFSP+LLDDRYT MS GA P PSEHTLGVLGHARG+ V+ S TPPSA F T T G+TQ AA +SPS Q E D G TARM VGL+EGPLEIIGGD GGSDDISDDND L LPQVDVMPRNNS NEVAEW VG EMTMEEAGELLLQQRPHLVPAPAMVDGGH HLAPGLSHVEPRDGD EM+WERAAMRRLDDGVKAFQRQEK+QGVAPLVF G GGVLLP VPPA+VDARTSPPAVDSNSTDDTIEWE EVE QLEEAGKLLRQQNL LVTAVAVGS TLLRPG+VYPPLFHANGNQDDA ASQHTT ALL PD F GAFQ
Sbjct: 6 MTSPQAGQRSDP---------------------FAVYENCPGAKELAPWLDAIIGVNSSSRSTRSAAPGPAINATPASCRR------AEWEQPSEVIQD-----AVATGLGLFALDPVLVEARETLQPERVNFVQPSPEQPRRAPTPPARPPAVEPLQGAIALLTEEADSMLGFTFLKQERQSDNVRMGFHILRGRQPQLFSTFTSGIIDMATSLTAGASIVPSHPVAADTVALAIIKLARFVASTAEEGIADGARDLLALVCLLMAQTLEANGSDSSDSLLAAMLAVSKV-------------KLKDKVCASLKWALYAVTPTTFGHLFLARALSEGALTGGHSELGYLSEFKPSELAAVGVGCRRSWLPSELAAAAIFCAVLREFDFQAARQVTEVARSGVVDLESSR---------------------------------GTDAGQRYIDEAADKAKGGGAAYGCNGSDTEGPTPPSTREPGEAHEGFFADDQLVSRSVSRSGNTSSSDRQDKDKPENGSGKSTTSSIRSIIGERTPCTTGRMTAPSREFARASRFSPMLLDDRYTTAMSAGALPSPSEHTLGVLGHARGNDVDTSVVTPPSASFATFTNGNTQPAAACVSPSHGQEESDPPGETARMTWARHPARASPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVGLDEGPLEIIGGDDGGSDDISDDNDALRLPQVDVMPRNNSINEVAEWGVGVEMTMEEAGELLLQQRPHLVPAPAMVDGGHIHLAPGLSHVEPRDGDIEMRWERAAMRRLDDGVKAFQRQEKKQGVAPLVFCGGGGVLLPAVPPAEVDARTSPPAVDSNSTDDTIEWEHEVEPQLEEAGKLLRQQNLRLVTAVAVGSCTLLRPGNVYPPLFHANGNQDDATASQHTTAI-------------ALLGPDVFAGAFQ 856
BLAST of mRNA_E-siliculosus-1a_F_contig1193.1231.1 vs. uniprot
Match: A0A6H5KK13_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KK13_9PHAE) HSP 1 Score: 624 bits (1609), Expect = 1.740e-212 Identity = 384/618 (62.14%), Postives = 406/618 (65.70%), Query Frame = 1
Query: 310 TSQATGLSLFALDPVLAETRETLQPERANFVQPSSEHPRRPPTPPTRPPAAEPLQGAIALSTEEADSMLAHTFLKQERQSDNVRMGFQMLRGRQPQLFSTFTSGIIDMAIGLTAGAGVVPSHPVAADTVALAIINLARFVATTAEEGIANDDRDLLPLVCLFMAQKLEENGSDN---ILAAMLAMRNVWEPDHTATKKRVAKLEAKV----CASLKWALYAVTPTTFGHLFLARALSEGALAGGQSQVRELTTVTSLRWVQLGYLSEFKPSELAAAAMFCAVLRECDFQAARQVTEVARSGVVDLESSRFWVLYREEDSHNAVPTIMDAIDAAGVGMGADDRGTDAAQRYIDGGADKTEGGGTAYGCNDSDTEGPTPPPTREPGEALEAFFADDQQVSRAVSSGGNTSSSNRQDMGEPENGSGKSTTSSARSIMGERTPCTTGEMTAPSREFARASRFSPILLDDRYTATMSTGASPCPSEH------TLGVLGHARGSGVEISAGTPPSAGFVTLTTGSTQQAAVRISPSQAQAEPDVRGATARMRSVGLNEGPLEIIGGDAGGSDDISDDNDTLGLPQVDVMPRNNSTNEVAEWDVGAEMTMEEAGELLLQQRPHL 2124
+SQAT L LFALDPVL E RETLQPER NFVQPS E PRR PTPP RPPA EPLQG I L TEEADS LAHTFLKQERQSDNVRMGF MLRGRQPQL STFTSGIIDMA LTAGA +VPSHPVAADTVALAIINLARFVA+TAEEG A+ DRDLL LVCL MAQKLE+NGSD+ +LAAMLA+ VW PDHTATKKR AKL+ K+ CASLKWALYAVTPTTFGHLFLARALSEGAL GG S+VRELTTV MDA++AAGVG EG G NDSDTEGPTPP TREPGEA E FFADDQQ R DM +PE+GSGKST SS RSI+GERTPCT+G MTAPS EFARASR SP+LLD +T MS GA P PSE TL V + +PP TL TGSTQ AA RISPS QAEP GATARM VGLNE PLEIIGGD GGSDDISDDND L LPQV+VMPRNNS NEVAEW VG EMTMEEAGELLLQQRPHL
Sbjct: 11 SSQATVLGLFALDPVLVEARETLQPERVNFVQPSPEQPRRAPTPPARPPAVEPLQGVIGLLTEEADSTLAHTFLKQERQSDNVRMGFHMLRGRQPQLISTFTSGIIDMATSLTAGASIVPSHPVAADTVALAIINLARFVASTAEEGKADGDRDLLALVCLLMAQKLEDNGSDSPDSLLAAMLAVSKVWGPDHTATKKRAAKLKVKLKDKACASLKWALYAVTPTTFGHLFLARALSEGALTGGHSEVRELTTV------------------------------------------------------------------------MDAVNAAGVGP-------------------TIEGLTQGSGRNDSDTEGPTPPSTREPGEAHEGFFADDQQPGRLQER--KHLVVRPTDMDKPESGSGKSTMSSIRSIIGERTPCTSGGMTAPSPEFARASRSSPMLLDGHHTTAMSAGALPSPSETLSGSWATLAVTTSRFRQARHPARASPP-----TLITGSTQPAAARISPSHGQAEPYPPGATARMTWVGLNEAPLEIIGGDDGGSDDISDDNDALCLPQVNVMPRNNSINEVAEWGVGVEMTMEEAGELLLQQRPHL 530
BLAST of mRNA_E-siliculosus-1a_F_contig1193.1231.1 vs. uniprot
Match: D7FHH6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHH6_ECTSI) HSP 1 Score: 382 bits (980), Expect = 1.420e-122 Identity = 199/217 (91.71%), Postives = 202/217 (93.09%), Query Frame = 1
Query: 859 NVWEPDHTATKKRVAKLEAKVCASLKWALYAVTPTTFGHLFLARALSEGALAGGQSQVRELTTVTSLRWVQLGYLSEFKPSELAAAAMFCAVLRECDFQAARQVTEVARSGVVDLESSRFWVLYREEDSHNAVPTIMDAIDAAGVGMGADDRGTDAAQRYIDGGADKTEGGGTAYGCNDSDTEGPTPPPTREPGEALEAFFADDQQVSRAVSSGGNT 1509
NV PDHTATKKRVA+LEAKVCASL WA+YAVTPTTFGHLFLARALSEGALAGGQSQV ELT VTSLRWVQLGYLSEFKPSELAAAAMFCAVLRECDFQAARQVTEVARSGVVDLESSRFW LYREEDSHNAVPTIMDAI AA VGMGADDRGTDA QRYIDG ADK EGGG AYGCNDSDTEGPTPPPTREPGEA E+FFADDQQVSRAVS GNT
Sbjct: 6 NVGGPDHTATKKRVARLEAKVCASLNWAIYAVTPTTFGHLFLARALSEGALAGGQSQVTELT-VTSLRWVQLGYLSEFKPSELAAAAMFCAVLRECDFQAARQVTEVARSGVVDLESSRFWGLYREEDSHNAVPTIMDAITAAVVGMGADDRGTDAGQRYIDGAADKAEGGGAAYGCNDSDTEGPTPPPTREPGEAHESFFADDQQVSRAVSRSGNT 221
BLAST of mRNA_E-siliculosus-1a_F_contig1193.1231.1 vs. uniprot
Match: D7FHH7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHH7_ECTSI) HSP 1 Score: 341 bits (874), Expect = 2.860e-107 Identity = 177/221 (80.09%), Postives = 191/221 (86.43%), Query Frame = 1
Query: 1 MTSPQAGWRRSPDPVFTTPRAASEVSSWRNRRPVAVNENYPGVSNLEPWLDEIIGVSSNSRNTRAAAPGPAIAATPASCRRVLANAWASFERADPARDTPPRGTSQATGLSLFALDPVLAETRETLQPERANFVQPSSEHPRRPPTPPTRPPAAEPLQGAIALSTEEADSMLAHTFLKQERQSDNVRMGFQMLRGRQPQLFSTFTSGIIDMAIGLTAGAGV 663
MTSPQA RRSPDP FTTPR ASEV+ W+ +RP+AV +N PG + L PWLD IIGV+S+SR+TR AAPGPAI ATPASC RVLA+AW SFERADPARD PRGTSQATGL LFAL+PVLAETRETL E ANF+QPSSEHPRR PTP RPPAAEPLQGAIALSTEEADSMLAHTFLKQERQSDNV MGF MLRGRQPQLFS FT GI+D+A GLTAGAGV
Sbjct: 6 MTSPQACRRRSPDPAFTTPRPASEVTPWQGQRPLAVYDNCPGANELAPWLDAIIGVNSSSRSTRGAAPGPAITATPASCWRVLADAWTSFERADPARDANPRGTSQATGLGLFALNPVLAETRETLLLENANFIQPSSEHPRRSPTPSGRPPAAEPLQGAIALSTEEADSMLAHTFLKQERQSDNVLMGFHMLRGRQPQLFSAFTCGIVDIATGLTAGAGV 226
BLAST of mRNA_E-siliculosus-1a_F_contig1193.1231.1 vs. uniprot
Match: A0A6H5KMW1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KMW1_9PHAE) HSP 1 Score: 149 bits (376), Expect = 1.080e-35 Identity = 74/105 (70.48%), Postives = 87/105 (82.86%), Query Frame = 1
Query: 667 PSHPVAADTVALAIINLARFVATTAEEGIANDDRDLLPLVCLFMAQKLEENGSDNILAAMLAMRNVWEPDHTA-TKKRVAKLEAKVCASLKWALYAVTPTTFGHL 978
PSHP+AAD +AL I+ LARF ATTA+EGIA+DDRDLLPLVC MA KLE+NG ++ LA +LA+ NVWEPDH A T K +AK++AKVCASLKWAL AVTPTT HL
Sbjct: 10 PSHPLAADAIALTIVKLARFTATTADEGIADDDRDLLPLVCQLMAHKLEDNGPESTLAELLAVCNVWEPDHVAATNKYMAKVKAKVCASLKWALNAVTPTTLAHL 114
BLAST of mRNA_E-siliculosus-1a_F_contig1193.1231.1 vs. uniprot
Match: A0A1U8KUJ6_GOSHI (cyclin-D4-1-like n=1 Tax=Gossypium hirsutum TaxID=3635 RepID=A0A1U8KUJ6_GOSHI) HSP 1 Score: 59.7 bits (143), Expect = 1.510e-5 Identity = 42/124 (33.87%), Postives = 65/124 (52.42%), Query Frame = 1
Query: 772 LLPLVCLFMAQKLEENGSDNILAAMLAMRNVWEPDHTATKKRVAKLEAKVCASLKWALYAVTPTTFGHLFLARALSEGALAGGQSQVRELTTVTSLRWVQLGYLSEFKPSELAAAAMFCAVLRE 1143
LL + CL +A K+EE +L L +EP ++ V ++E +V A+L W L +VTP + HLFL + S L + + ++ L ++ +F PS +AAAA+FCA LRE
Sbjct: 138 LLSVACLSLAAKMEEAEVPLLLDLQL-----FEPRFVFERETVQRMELRVMAALNWRLRSVTPFEYLHLFLCKFPS---LPDSFASLLSASSDLILSTTRVIDFLQFAPSAMAAAAVFCASLRE 253 The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig1193.1231.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90) Total hits: 8
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-siliculosus-1a_F_contig1193.1231.1 >prot_E-siliculosus-1a_F_contig1193.1231.1 ID=prot_E-siliculosus-1a_F_contig1193.1231.1|Name=mRNA_E-siliculosus-1a_F_contig1193.1231.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=950bp MTSPQAGWRRSPDPVFTTPRAASEVSSWRNRRPVAVNENYPGVSNLEPWLback to top mRNA from alignment at E-siliculosus-1a_F_contig1193:8533..13494- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-siliculosus-1a_F_contig1193.1231.1 ID=mRNA_E-siliculosus-1a_F_contig1193.1231.1|Name=mRNA_E-siliculosus-1a_F_contig1193.1231.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=4962bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1193:8533..13494- (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top Coding sequence (CDS) from alignment at E-siliculosus-1a_F_contig1193:8533..13494- >mRNA_E-siliculosus-1a_F_contig1193.1231.1 ID=mRNA_E-siliculosus-1a_F_contig1193.1231.1|Name=mRNA_E-siliculosus-1a_F_contig1193.1231.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=5700bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1193:8533..13494- (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top |