mRNA_E-siliculosus-1a_F_contig1193.1231.1 (mRNA) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E-siliculosus-1a_F_contig1193.1231.1
Unique NamemRNA_E-siliculosus-1a_F_contig1193.1231.1
TypemRNA
OrganismEctocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig1193.1231.1 vs. uniprot
Match: D7FHG2_ECTSI (Cyclin D2 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHG2_ECTSI)

HSP 1 Score: 1640 bits (4248), Expect = 0.000e+0
Identity = 852/949 (89.78%), Postives = 877/949 (92.41%), Query Frame = 1
Query:    1 MTSPQAGWRRSPDPVFTTPRAASEVSSWRNRRPVAVNENYPGVSNLEPWLDEIIGVSSNSRNTRAAAPGPAIAATPASCRRVLANAWASFERADPARDTPPRGTSQATGLSLFALDPVLAETRETLQPERANFVQPSSEHPRRPPTPPTRPPAAEPLQGAIALSTEEADSMLAHTFLKQERQSDNVRMGFQMLRGRQPQLFSTFTSGIIDMAIGLTAGAGVVPSHPVAADTVALAIINLARFVATTAEEGIANDDRDLLPLVCLFMAQKLEENGSDNILAAMLAMRNVWEPDHTATKKRVAKLEAKVCASLKWALYAVTPTTFGHLFLARALSEGALAGGQSQVRELTTVTSLRWVQLGYLSEFKPSELAAAAMFCAVLRECDFQAARQVTEVARSGVVDLESSRFWVLYREEDSHNAVPTIMDAIDAAGVGMGADDRGTDAAQRYIDGGADKTEGGGTAYGCNDSDTEGPTPPPTREPGEALEAFFADDQQVSRAVSSGGNTSSSNRQDMGEPENGSGKSTTSSARSIMGERTPCTTGEMTAPSREFARASRFSPILLDDRYTATMSTGASPCPSEHTLGVLGHARGSGVEISAGTPPSAGFVTLTTGSTQQAAVRISPSQAQAEPDVRGATARMRSVGLNEGPLEIIGGDAGGSDDISDDNDTLGLPQVDVMPRNNSTNEVAEWDVGAEMTMEEAGELLLQQRPHLVPAPAMVDGGHSHLAPGLSHVEPRDGDTEMKWERAAMRRLDDGVKAFQRQEKRQGVAPLVFWGEGGVLLPVVPPAQVDARTSPPAVDSNSTDDTIEWEREVERQLEEAGKLLRQQNLHLVTAVAVGSHTLLRPGDVYPPLFHANGNQDDAPASQHTTTATXXXXXXXXXXXXALLRPDAFTGAFQCQEEGNADSAPPGSSRRTFYPLLFHTNGSQDDASASQHTAATALLRPDAFAGEFQS 2847
            MTSPQAGWRRSPDPVFTTPRAASEVS WRNR PVAVNENYPGVSNLEPWLDEIIGVSS+ RNTRAAAPGPAI ATPASCRRVLANAWASFERADPARDT PRGTSQAT LSLFAL+PVLAETRETLQPERAN VQPSSEH RRPPTPP R PAAEPLQGAIALSTEEADSMLAHTFLKQERQSDNV MGF MLRGRQPQLFS FTSGI+D+A GLTAGAGV PSHPVAADTVALAIINLARFVATTAEEGIA+D+RDLLPLVCL MAQKLE+NG D++L+AML + NV +PDHTATKKRVA+LEAKVCASLKWALYAVTPTTFGHLFLARALSEGALAGGQSQVRELTTVTSLRWVQLGYLSEFKPSELAAAAMFCAVLRE DFQ ARQV E  RSGVVDLESSRFW LYREEDSHNAVPTIMDAIDAAGVGMGADDRGT AAQRYIDG ADK EG GTAYGCNDSDTEGPTPPPTREPGEALEAFF DDQQVSRAVS  GNTSS +RQDM EPENGSGKSTT SARSI+GERTPCTTG MTAPSREFA AS FSPILLDDRYT  MS GASP PSEHTLGVLGH RGS VEISAGTPPSAGFVTLTTGSTQ AAVRISPSQAQA+PDV GATAR++SVGLNEGP EIIGGD GGSDD+SDDN+TLGLPQV+V+P NNSTNEVAEWDVG EMTMEEAGELLLQQRPHLVPAPAMVDGG+SHLAPGLSHVEPRDGDTEM+WERAAMRRLDDGVKAFQRQEKRQGVAPLVFWGEGGVLLPVVPPAQVDARTSPPAVDSNSTDDTIEW+REVERQLEEAGKLLRQQNLHLVTAVAVGSH LLRP DVYPPLFH NGNQDDAPASQH  T              ALLRPDAFTGAFQCQEEGNADSAPPGSSRRTFYPLLFHTNGSQDDA ASQHT ATALLRPDAFAGEFQS
Sbjct:    1 MTSPQAGWRRSPDPVFTTPRAASEVSLWRNRLPVAVNENYPGVSNLEPWLDEIIGVSSDRRNTRAAAPGPAITATPASCRRVLANAWASFERADPARDTTPRGTSQATALSLFALNPVLAETRETLQPERANLVQPSSEHSRRPPTPPARQPAAEPLQGAIALSTEEADSMLAHTFLKQERQSDNVLMGFYMLRGRQPQLFSAFTSGIVDIATGLTAGAGVAPSHPVAADTVALAIINLARFVATTAEEGIADDNRDLLPLVCLLMAQKLEDNGPDSLLSAMLTVCNVGDPDHTATKKRVARLEAKVCASLKWALYAVTPTTFGHLFLARALSEGALAGGQSQVRELTTVTSLRWVQLGYLSEFKPSELAAAAMFCAVLRERDFQEARQVNEATRSGVVDLESSRFWGLYREEDSHNAVPTIMDAIDAAGVGMGADDRGTGAAQRYIDGAADKDEGSGTAYGCNDSDTEGPTPPPTREPGEALEAFFTDDQQVSRAVSRSGNTSSPDRQDMDEPENGSGKSTTCSARSIIGERTPCTTGGMTAPSREFATASHFSPILLDDRYTTAMSAGASPSPSEHTLGVLGHDRGSDVEISAGTPPSAGFVTLTTGSTQPAAVRISPSQAQADPDVPGATARIKSVGLNEGPFEIIGGDDGGSDDVSDDNNTLGLPQVEVIPGNNSTNEVAEWDVGVEMTMEEAGELLLQQRPHLVPAPAMVDGGYSHLAPGLSHVEPRDGDTEMRWERAAMRRLDDGVKAFQRQEKRQGVAPLVFWGEGGVLLPVVPPAQVDARTSPPAVDSNSTDDTIEWKREVERQLEEAGKLLRQQNLHLVTAVAVGSHALLRPEDVYPPLFHTNGNQDDAPASQHAATT-------------ALLRPDAFTGAFQCQEEGNADSAPPGSSRRTFYPLLFHTNGSQDDAPASQHTTATALLRPDAFAGEFQS 936          
BLAST of mRNA_E-siliculosus-1a_F_contig1193.1231.1 vs. uniprot
Match: A0A6H5L9D3_9PHAE (Cyclin N-terminal domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L9D3_9PHAE)

HSP 1 Score: 1521 bits (3937), Expect = 0.000e+0
Identity = 822/1044 (78.74%), Postives = 847/1044 (81.13%), Query Frame = 1
Query:    1 MTSPQAGWRRSPDPVFTTPRAASEVSSWRNRRPVAVNENYPGVSNLEPWLDEIIGVSSNSRNTRAAAPGPAIAATPASCRRVLANAWASFERADPARDTPPRGTSQATGLSLFALDPVLAETRETLQPERANFVQPSSEHPRRPPTPPTRPPAAEPLQGAIALSTEEADSMLAHTFLKQERQSDNVRMGFQMLRGRQPQLFSTFTSGIIDMAIGLTAGAGVVPSHPVAADTVALAIINLARFVATTAEEGIANDDRDLLPLVCLFMAQKLEENGSDNILAAMLAMRNVWEPDHTATKKRVAKLEAKVCASLKWALYAVTPTTFGHLFLARALSEGALAGGQSQVRELTTVTSLRWVQLGYLSEFKPSELAAAAMFCAVLRECDFQAARQVTEVARSGVVDLESSRFWVLYREEDSHNAVPTIMDAIDAAGVGMGADDRGTDAAQRYIDGGADKTEGGGTAYGCNDSDTEGPTPPPTREPGEALEAFFADDQQVSRAVSSGGNTSSSNRQDMGEPENGSGKSTTSSARSIMGERTPCTTGEMTAPSREFARASRFSPILLDDRYTATMSTGAS-------------------------------------------PC-----------PSEHTLGVLGHARGSGVEISAGTPPSAGFVTLTTGSTQQAAVRISPSQAQAEPDVRGATARMRSVGLNEGPLEIIGGDAGGSDDISDDNDTLGLPQVDVMPRNNSTNEVAEWDVGAEMTMEEAGELLLQQRPHLVPAPAMVDGGHSHLAPGLSHVEPRDGDTEMKWERAAMRRLDDGVKAFQRQEKRQGVAPLVFWGEGGVLLPVVPPAQVDARTSPPAVDSNSTDDTIEWEREVERQLEEAGKLLRQQNLHLVTAVAVGSHTLLRPGDVYPPLFHANGNQDDAPASQHTTTA-----------------------------------------TXXXXXXXXXXXXALLRPDAFTGAFQCQEEGNADSAPPGSSRRTFYPLLFHTNGSQDDASASQHTAATALLRPDAFAGEFQS 2847
            MTSPQAGWRRSP  VFTTPR ASEVSSWRNRRPVAVNENYPGVSNLEPWLDEIIGVSSN RNTRAAAPGPA  ATPASCRRVLANAWASFERA+ +RDT PRGTS A GLSLFALDPVLAETRETL+PERANFVQPSSEHPRRPPTPPTRPPA EPLQGA ALSTEEADSMLAHTFLKQ+RQ DNVR+GFQMLRG QPQLFSTFTSGIIDMAIGLTAGA +VPSHPVAADTVALAIINLARFVATTAEEGIA+DDRDLLPLVCLFMAQKLEENG DNILAAMLAMRNVWEPDHTATKKRVAKLE+KVCASLKWALYAVTPTTFGHLFLARALSEG LAGGQSQVRELT  TSLRWVQLGYLSEFKPSELAAAA+FCAVLRECDFQAARQVTE  RSGVVDLESSRFWVLYREEDSHNAVPTIMDAI+AAGVGMGADDRGTDAAQ YIDG ADK EGGGTAYGCNDSDTEGPTPPPTREPGEA EAFFAD QQVS   SSGG TSSSNRQDM EPE+GSGK +TSSARSI+GERT CTTGEMTAPSREFARASRF P+LLDDRYT  MS GAS                                            C            SEHTLG+LGHARGS V+ S  TPPSA F T T  +TQ AA  +SPS  Q E D  GATARM  +GLN GPL IIGGDAGGSD ISDDNDTLGLPQVD+MPR NS NEVAEWDV  EMTMEEA ELLLQQRPHLVPAPAM  GGHSHLAP LSHVEPRDGDTEM+WERAAMRRLDDGVKAFQRQE +QGVAPLVFWGEGGVLLPVVPPAQVDARTSPPA  SNSTDD IEWEREVERQLEEAGKLLRQQN HLVTAVAVGS TLLRPG VYPPLFH N +QDDAP SQH  T                                          +            ALLRPDAFTGAFQCQEE NADSAPPGSSRRTFYPLLFHTNG QDDA ASQHT ATALL  +AFAG FQS
Sbjct:    6 MTSPQAGWRRSPGLVFTTPRTASEVSSWRNRRPVAVNENYPGVSNLEPWLDEIIGVSSNRRNTRAAAPGPANTATPASCRRVLANAWASFERANSSRDTTPRGTSHAMGLSLFALDPVLAETRETLRPERANFVQPSSEHPRRPPTPPTRPPAVEPLQGASALSTEEADSMLAHTFLKQDRQFDNVRVGFQMLRGCQPQLFSTFTSGIIDMAIGLTAGASIVPSHPVAADTVALAIINLARFVATTAEEGIADDDRDLLPLVCLFMAQKLEENGPDNILAAMLAMRNVWEPDHTATKKRVAKLESKVCASLKWALYAVTPTTFGHLFLARALSEGTLAGGQSQVRELTAATSLRWVQLGYLSEFKPSELAAAAIFCAVLRECDFQAARQVTEDTRSGVVDLESSRFWVLYREEDSHNAVPTIMDAINAAGVGMGADDRGTDAAQPYIDGAADKAEGGGTAYGCNDSDTEGPTPPPTREPGEAHEAFFADGQQVSLVASSGGYTSSSNRQDMDEPESGSGKISTSSARSIIGERTYCTTGEMTAPSREFARASRFFPMLLDDRYTTAMSAGASLSSSEHTLGILGHARGSDVDTSVVTPPSASFATYTNRNTQPAAACVSPSHGQEXLSSSEHTLGILGHARGSDVDTSVVTPPSASFATYTNRNTQPAAACVSPSHGQEESDPPGATARMPWLGLNVGPLGIIGGDAGGSDGISDDNDTLGLPQVDMMPRTNSINEVAEWDVVVEMTMEEADELLLQQRPHLVPAPAMFGGGHSHLAPDLSHVEPRDGDTEMRWERAAMRRLDDGVKAFQRQENKQGVAPLVFWGEGGVLLPVVPPAQVDARTSPPA--SNSTDDAIEWEREVERQLEEAGKLLRQQNFHLVTAVAVGSCTLLRPGKVYPPLFHTNDHQDDAPTSQHAVTTALLRPDAFAGTFRSQEEGNTDSAPPGLSRRGFYPPPFDTNGSQDDAPASQHAATALLRPDAFTGAFQCQEEVNADSAPPGSSRRTFYPLLFHTNGRQDDAPASQHTTATALLGSNAFAGAFQS 1047          
BLAST of mRNA_E-siliculosus-1a_F_contig1193.1231.1 vs. uniprot
Match: A0A6H5JNX6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JNX6_9PHAE)

HSP 1 Score: 1105 bits (2858), Expect = 0.000e+0
Identity = 640/942 (67.94%), Postives = 677/942 (71.87%), Query Frame = 1
Query:    1 MTSPQAGWRRSPDPVFTTPRAASEVSSWRNRRPVAVNENYPGVSNLEPWLDEIIGVSSNSRNTRAAAPGPAIAATPASCRRVLANAWASFERADPARDTPPRGTSQATGLSLFALDPVLAETRETLQPERANFVQPSSEHPRRPPTPPTRPPAAEPLQGAIALSTEEADSMLAHTFLKQERQSDNVRMGFQMLRGRQPQLFSTFTSGIIDMAIGLTAGAGVVPSHPVAADTVALAIINLARFVATTAEEGIANDDRDLLPLVCLFMAQKLEENGSDN---ILAAMLAMRNVWEPDHTATKKRVAKLEAKVCASLKWALYAVTPTTFGHLFLARALSEGALAGGQSQVRELTTV--TSLRWVQLGYLSEFKPSELAAAAMFCAVLRECDFQAARQVTEVARSGVVDLESSRFWVLYREEDSHNAVPTIMDAIDAAGVGMGADDRGTDAAQRYIDGGADKTEGGGTAYGCNDSDTEGPTPPPTREPGEALEAFFADDQQVSRAVSSGGNTSSSNRQDMGEPENGSGKSTTSSARSIMGERTPCTTGEMTAPSREFARASRFSPILLDDRYTATMSTGASPCPSEHTLGVLGHARGSGVEISAGTPPSAGFVTLTTGSTQQAAVRISPSQAQAEPDVRGATARMR--------------------------------------------SVGLNEGPLEIIGGDAGGSDDISDDNDTLGLPQVDVMPRNNSTNEVAEWDVGAEMTMEEAGELLLQQRPHLVPAPAMVDGGHSHLAPGLSHVEPRDGDTEMKWERAAMRRLDDGVKAFQRQEKRQGVAPLVFWGEGGVLLPVVPPAQVDARTSPPAVDSNSTDDTIEWEREVERQLEEAGKLLRQQNLHLVTAVAVGSHTLLRPGDVYPPLFHANGNQDDAPASQHTTTATXXXXXXXXXXXXALLRPDAFTGAFQ 2679
            MTSPQAG R  P                      AV EN PG   L PWLD IIGV+S+SR+TR+AAPGPAI ATPASCRR      A +E+            + ATGL LFALDPVL E RETLQPER NFVQPS E PRR PTPP RPPA EPLQGAIAL TEEADSML  TFLKQERQSDNVRMGF +LRGRQPQLFSTFTSGIIDMA  LTAGA +VPSHPVAADTVALAII LARFVA+TAEEGIA+  RDLL LVCL MAQ LE NGSD+   +LAAMLA+  V             KL+ KVCASLKWALYAVTPTTFGHLFLARALSEGAL GG S++  L+    + L  V +G    + PSELAAAA+FCAVLRE DFQAARQVTEVARSGVVDLESSR                                 GTDA QRYID  ADK +GGG AYGCN SDTEGPTPP TREPGEA E FFADDQ VSR+VS  GNTSSS+RQD  +PENGSGKSTTSS RSI+GERTPCTTG MTAPSREFARASRFSP+LLDDRYT  MS GA P PSEHTLGVLGHARG+ V+ S  TPPSA F T T G+TQ AA  +SPS  Q E D  G TARM                                              VGL+EGPLEIIGGD GGSDDISDDND L LPQVDVMPRNNS NEVAEW VG EMTMEEAGELLLQQRPHLVPAPAMVDGGH HLAPGLSHVEPRDGD EM+WERAAMRRLDDGVKAFQRQEK+QGVAPLVF G GGVLLP VPPA+VDARTSPPAVDSNSTDDTIEWE EVE QLEEAGKLLRQQNL LVTAVAVGS TLLRPG+VYPPLFHANGNQDDA ASQHTT               ALL PD F GAFQ
Sbjct:    6 MTSPQAGQRSDP---------------------FAVYENCPGAKELAPWLDAIIGVNSSSRSTRSAAPGPAINATPASCRR------AEWEQPSEVIQD-----AVATGLGLFALDPVLVEARETLQPERVNFVQPSPEQPRRAPTPPARPPAVEPLQGAIALLTEEADSMLGFTFLKQERQSDNVRMGFHILRGRQPQLFSTFTSGIIDMATSLTAGASIVPSHPVAADTVALAIIKLARFVASTAEEGIADGARDLLALVCLLMAQTLEANGSDSSDSLLAAMLAVSKV-------------KLKDKVCASLKWALYAVTPTTFGHLFLARALSEGALTGGHSELGYLSEFKPSELAAVGVGCRRSWLPSELAAAAIFCAVLREFDFQAARQVTEVARSGVVDLESSR---------------------------------GTDAGQRYIDEAADKAKGGGAAYGCNGSDTEGPTPPSTREPGEAHEGFFADDQLVSRSVSRSGNTSSSDRQDKDKPENGSGKSTTSSIRSIIGERTPCTTGRMTAPSREFARASRFSPMLLDDRYTTAMSAGALPSPSEHTLGVLGHARGNDVDTSVVTPPSASFATFTNGNTQPAAACVSPSHGQEESDPPGETARMTWARHPARASPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVGLDEGPLEIIGGDDGGSDDISDDNDALRLPQVDVMPRNNSINEVAEWGVGVEMTMEEAGELLLQQRPHLVPAPAMVDGGHIHLAPGLSHVEPRDGDIEMRWERAAMRRLDDGVKAFQRQEKKQGVAPLVFCGGGGVLLPAVPPAEVDARTSPPAVDSNSTDDTIEWEHEVEPQLEEAGKLLRQQNLRLVTAVAVGSCTLLRPGNVYPPLFHANGNQDDATASQHTTAI-------------ALLGPDVFAGAFQ 856          
BLAST of mRNA_E-siliculosus-1a_F_contig1193.1231.1 vs. uniprot
Match: A0A6H5KK13_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KK13_9PHAE)

HSP 1 Score: 624 bits (1609), Expect = 1.740e-212
Identity = 384/618 (62.14%), Postives = 406/618 (65.70%), Query Frame = 1
Query:  310 TSQATGLSLFALDPVLAETRETLQPERANFVQPSSEHPRRPPTPPTRPPAAEPLQGAIALSTEEADSMLAHTFLKQERQSDNVRMGFQMLRGRQPQLFSTFTSGIIDMAIGLTAGAGVVPSHPVAADTVALAIINLARFVATTAEEGIANDDRDLLPLVCLFMAQKLEENGSDN---ILAAMLAMRNVWEPDHTATKKRVAKLEAKV----CASLKWALYAVTPTTFGHLFLARALSEGALAGGQSQVRELTTVTSLRWVQLGYLSEFKPSELAAAAMFCAVLRECDFQAARQVTEVARSGVVDLESSRFWVLYREEDSHNAVPTIMDAIDAAGVGMGADDRGTDAAQRYIDGGADKTEGGGTAYGCNDSDTEGPTPPPTREPGEALEAFFADDQQVSRAVSSGGNTSSSNRQDMGEPENGSGKSTTSSARSIMGERTPCTTGEMTAPSREFARASRFSPILLDDRYTATMSTGASPCPSEH------TLGVLGHARGSGVEISAGTPPSAGFVTLTTGSTQQAAVRISPSQAQAEPDVRGATARMRSVGLNEGPLEIIGGDAGGSDDISDDNDTLGLPQVDVMPRNNSTNEVAEWDVGAEMTMEEAGELLLQQRPHL 2124
            +SQAT L LFALDPVL E RETLQPER NFVQPS E PRR PTPP RPPA EPLQG I L TEEADS LAHTFLKQERQSDNVRMGF MLRGRQPQL STFTSGIIDMA  LTAGA +VPSHPVAADTVALAIINLARFVA+TAEEG A+ DRDLL LVCL MAQKLE+NGSD+   +LAAMLA+  VW PDHTATKKR AKL+ K+    CASLKWALYAVTPTTFGHLFLARALSEGAL GG S+VRELTTV                                                                        MDA++AAGVG                      EG     G NDSDTEGPTPP TREPGEA E FFADDQQ  R              DM +PE+GSGKST SS RSI+GERTPCT+G MTAPS EFARASR SP+LLD  +T  MS GA P PSE       TL V           +  +PP     TL TGSTQ AA RISPS  QAEP   GATARM  VGLNE PLEIIGGD GGSDDISDDND L LPQV+VMPRNNS NEVAEW VG EMTMEEAGELLLQQRPHL
Sbjct:   11 SSQATVLGLFALDPVLVEARETLQPERVNFVQPSPEQPRRAPTPPARPPAVEPLQGVIGLLTEEADSTLAHTFLKQERQSDNVRMGFHMLRGRQPQLISTFTSGIIDMATSLTAGASIVPSHPVAADTVALAIINLARFVASTAEEGKADGDRDLLALVCLLMAQKLEDNGSDSPDSLLAAMLAVSKVWGPDHTATKKRAAKLKVKLKDKACASLKWALYAVTPTTFGHLFLARALSEGALTGGHSEVRELTTV------------------------------------------------------------------------MDAVNAAGVGP-------------------TIEGLTQGSGRNDSDTEGPTPPSTREPGEAHEGFFADDQQPGRLQER--KHLVVRPTDMDKPESGSGKSTMSSIRSIIGERTPCTSGGMTAPSPEFARASRSSPMLLDGHHTTAMSAGALPSPSETLSGSWATLAVTTSRFRQARHPARASPP-----TLITGSTQPAAARISPSHGQAEPYPPGATARMTWVGLNEAPLEIIGGDDGGSDDISDDNDALCLPQVNVMPRNNSINEVAEWGVGVEMTMEEAGELLLQQRPHL 530          
BLAST of mRNA_E-siliculosus-1a_F_contig1193.1231.1 vs. uniprot
Match: D7FHH6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHH6_ECTSI)

HSP 1 Score: 382 bits (980), Expect = 1.420e-122
Identity = 199/217 (91.71%), Postives = 202/217 (93.09%), Query Frame = 1
Query:  859 NVWEPDHTATKKRVAKLEAKVCASLKWALYAVTPTTFGHLFLARALSEGALAGGQSQVRELTTVTSLRWVQLGYLSEFKPSELAAAAMFCAVLRECDFQAARQVTEVARSGVVDLESSRFWVLYREEDSHNAVPTIMDAIDAAGVGMGADDRGTDAAQRYIDGGADKTEGGGTAYGCNDSDTEGPTPPPTREPGEALEAFFADDQQVSRAVSSGGNT 1509
            NV  PDHTATKKRVA+LEAKVCASL WA+YAVTPTTFGHLFLARALSEGALAGGQSQV ELT VTSLRWVQLGYLSEFKPSELAAAAMFCAVLRECDFQAARQVTEVARSGVVDLESSRFW LYREEDSHNAVPTIMDAI AA VGMGADDRGTDA QRYIDG ADK EGGG AYGCNDSDTEGPTPPPTREPGEA E+FFADDQQVSRAVS  GNT
Sbjct:    6 NVGGPDHTATKKRVARLEAKVCASLNWAIYAVTPTTFGHLFLARALSEGALAGGQSQVTELT-VTSLRWVQLGYLSEFKPSELAAAAMFCAVLRECDFQAARQVTEVARSGVVDLESSRFWGLYREEDSHNAVPTIMDAITAAVVGMGADDRGTDAGQRYIDGAADKAEGGGAAYGCNDSDTEGPTPPPTREPGEAHESFFADDQQVSRAVSRSGNT 221          
BLAST of mRNA_E-siliculosus-1a_F_contig1193.1231.1 vs. uniprot
Match: D7FHH7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHH7_ECTSI)

HSP 1 Score: 341 bits (874), Expect = 2.860e-107
Identity = 177/221 (80.09%), Postives = 191/221 (86.43%), Query Frame = 1
Query:    1 MTSPQAGWRRSPDPVFTTPRAASEVSSWRNRRPVAVNENYPGVSNLEPWLDEIIGVSSNSRNTRAAAPGPAIAATPASCRRVLANAWASFERADPARDTPPRGTSQATGLSLFALDPVLAETRETLQPERANFVQPSSEHPRRPPTPPTRPPAAEPLQGAIALSTEEADSMLAHTFLKQERQSDNVRMGFQMLRGRQPQLFSTFTSGIIDMAIGLTAGAGV 663
            MTSPQA  RRSPDP FTTPR ASEV+ W+ +RP+AV +N PG + L PWLD IIGV+S+SR+TR AAPGPAI ATPASC RVLA+AW SFERADPARD  PRGTSQATGL LFAL+PVLAETRETL  E ANF+QPSSEHPRR PTP  RPPAAEPLQGAIALSTEEADSMLAHTFLKQERQSDNV MGF MLRGRQPQLFS FT GI+D+A GLTAGAGV
Sbjct:    6 MTSPQACRRRSPDPAFTTPRPASEVTPWQGQRPLAVYDNCPGANELAPWLDAIIGVNSSSRSTRGAAPGPAITATPASCWRVLADAWTSFERADPARDANPRGTSQATGLGLFALNPVLAETRETLLLENANFIQPSSEHPRRSPTPSGRPPAAEPLQGAIALSTEEADSMLAHTFLKQERQSDNVLMGFHMLRGRQPQLFSAFTCGIVDIATGLTAGAGV 226          
BLAST of mRNA_E-siliculosus-1a_F_contig1193.1231.1 vs. uniprot
Match: A0A6H5KMW1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KMW1_9PHAE)

HSP 1 Score: 149 bits (376), Expect = 1.080e-35
Identity = 74/105 (70.48%), Postives = 87/105 (82.86%), Query Frame = 1
Query:  667 PSHPVAADTVALAIINLARFVATTAEEGIANDDRDLLPLVCLFMAQKLEENGSDNILAAMLAMRNVWEPDHTA-TKKRVAKLEAKVCASLKWALYAVTPTTFGHL 978
            PSHP+AAD +AL I+ LARF ATTA+EGIA+DDRDLLPLVC  MA KLE+NG ++ LA +LA+ NVWEPDH A T K +AK++AKVCASLKWAL AVTPTT  HL
Sbjct:   10 PSHPLAADAIALTIVKLARFTATTADEGIADDDRDLLPLVCQLMAHKLEDNGPESTLAELLAVCNVWEPDHVAATNKYMAKVKAKVCASLKWALNAVTPTTLAHL 114          
BLAST of mRNA_E-siliculosus-1a_F_contig1193.1231.1 vs. uniprot
Match: A0A1U8KUJ6_GOSHI (cyclin-D4-1-like n=1 Tax=Gossypium hirsutum TaxID=3635 RepID=A0A1U8KUJ6_GOSHI)

HSP 1 Score: 59.7 bits (143), Expect = 1.510e-5
Identity = 42/124 (33.87%), Postives = 65/124 (52.42%), Query Frame = 1
Query:  772 LLPLVCLFMAQKLEENGSDNILAAMLAMRNVWEPDHTATKKRVAKLEAKVCASLKWALYAVTPTTFGHLFLARALSEGALAGGQSQVRELTTVTSLRWVQLGYLSEFKPSELAAAAMFCAVLRE 1143
            LL + CL +A K+EE     +L   L     +EP     ++ V ++E +V A+L W L +VTP  + HLFL +  S   L    + +   ++   L   ++    +F PS +AAAA+FCA LRE
Sbjct:  138 LLSVACLSLAAKMEEAEVPLLLDLQL-----FEPRFVFERETVQRMELRVMAALNWRLRSVTPFEYLHLFLCKFPS---LPDSFASLLSASSDLILSTTRVIDFLQFAPSAMAAAAVFCASLRE 253          
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig1193.1231.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 8
Match NameE-valueIdentityDescription
D7FHG2_ECTSI0.000e+089.78Cyclin D2 n=1 Tax=Ectocarpus siliculosus TaxID=288... [more]
A0A6H5L9D3_9PHAE0.000e+078.74Cyclin N-terminal domain-containing protein n=1 Ta... [more]
A0A6H5JNX6_9PHAE0.000e+067.94Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KK13_9PHAE1.740e-21262.14Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FHH6_ECTSI1.420e-12291.71Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7FHH7_ECTSI2.860e-10780.09Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KMW1_9PHAE1.080e-3570.48Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A1U8KUJ6_GOSHI1.510e-533.87cyclin-D4-1-like n=1 Tax=Gossypium hirsutum TaxID=... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_F_contig1193contigE-siliculosus-1a_F_contig1193:8533..13494 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef902022-09-19
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female2021-02-24
Properties
Property NameValue
Start1
Stop1
Cds size2850
Model size2850
Exons5
Ec32 orthologEc-25_002520.1
Ec32 ortholog descriptionCyclin-like
Hectar predicted targeting categoryother localisation
EggNOG OGs37RCW@33090,3GHM7@35493,4JTCC@91835,KOG0656@1,KOG0656@2759
EggNOG free text desc.Belongs to the cyclin family
KEGG ModuleM00692
KEGG koko:K18810
Seed eggNOG ortholog3847.GLYMA05G22670.1
BRITEko00000,ko00002
Best eggNOG OGNA|NA|NA
Best tax levelfabids
COG Functional cat.D
Seed ortholog evalue1.7e-06
Seed ortholog score62.0
Taxonomic scopeViridiplantae
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_F_contig1193.1231.1prot_E-siliculosus-1a_F_contig1193.1231.1Ectocarpus siliculosus Ec863f_EcPH12_90f femalepolypeptideE-siliculosus-1a_F_contig1193 8533..13494 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927711.4838362-CDS-E-siliculosus-1a_F_contig1193:8532..87791622927711.4838362-CDS-E-siliculosus-1a_F_contig1193:8532..8779Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1193 8533..8779 -
1696318649.5798855-CDS-E-siliculosus-1a_F_contig1193:8532..87791696318649.5798855-CDS-E-siliculosus-1a_F_contig1193:8532..8779Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1193 8533..8779 -
1622927711.5055072-CDS-E-siliculosus-1a_F_contig1193:9067..101941622927711.5055072-CDS-E-siliculosus-1a_F_contig1193:9067..10194Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1193 9068..10194 -
1696318649.5891094-CDS-E-siliculosus-1a_F_contig1193:9067..101941696318649.5891094-CDS-E-siliculosus-1a_F_contig1193:9067..10194Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1193 9068..10194 -
1622927711.5262883-CDS-E-siliculosus-1a_F_contig1193:10351..115091622927711.5262883-CDS-E-siliculosus-1a_F_contig1193:10351..11509Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1193 10352..11509 -
1696318649.6025872-CDS-E-siliculosus-1a_F_contig1193:10351..115091696318649.6025872-CDS-E-siliculosus-1a_F_contig1193:10351..11509Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1193 10352..11509 -
1622927711.5439186-CDS-E-siliculosus-1a_F_contig1193:12052..121281622927711.5439186-CDS-E-siliculosus-1a_F_contig1193:12052..12128Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1193 12053..12128 -
1696318649.610653-CDS-E-siliculosus-1a_F_contig1193:12052..121281696318649.610653-CDS-E-siliculosus-1a_F_contig1193:12052..12128Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1193 12053..12128 -
1622927711.5619495-CDS-E-siliculosus-1a_F_contig1193:13252..134941622927711.5619495-CDS-E-siliculosus-1a_F_contig1193:13252..13494Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1193 13253..13494 -
1696318649.6256964-CDS-E-siliculosus-1a_F_contig1193:13252..134941696318649.6256964-CDS-E-siliculosus-1a_F_contig1193:13252..13494Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1193 13253..13494 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E-siliculosus-1a_F_contig1193.1231.1

>prot_E-siliculosus-1a_F_contig1193.1231.1 ID=prot_E-siliculosus-1a_F_contig1193.1231.1|Name=mRNA_E-siliculosus-1a_F_contig1193.1231.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=950bp
MTSPQAGWRRSPDPVFTTPRAASEVSSWRNRRPVAVNENYPGVSNLEPWL
DEIIGVSSNSRNTRAAAPGPAIAATPASCRRVLANAWASFERADPARDTP
PRGTSQATGLSLFALDPVLAETRETLQPERANFVQPSSEHPRRPPTPPTR
PPAAEPLQGAIALSTEEADSMLAHTFLKQERQSDNVRMGFQMLRGRQPQL
FSTFTSGIIDMAIGLTAGAGVVPSHPVAADTVALAIINLARFVATTAEEG
IANDDRDLLPLVCLFMAQKLEENGSDNILAAMLAMRNVWEPDHTATKKRV
AKLEAKVCASLKWALYAVTPTTFGHLFLARALSEGALAGGQSQVRELTTV
TSLRWVQLGYLSEFKPSELAAAAMFCAVLRECDFQAARQVTEVARSGVVD
LESSRFWVLYREEDSHNAVPTIMDAIDAAGVGMGADDRGTDAAQRYIDGG
ADKTEGGGTAYGCNDSDTEGPTPPPTREPGEALEAFFADDQQVSRAVSSG
GNTSSSNRQDMGEPENGSGKSTTSSARSIMGERTPCTTGEMTAPSREFAR
ASRFSPILLDDRYTATMSTGASPCPSEHTLGVLGHARGSGVEISAGTPPS
AGFVTLTTGSTQQAAVRISPSQAQAEPDVRGATARMRSVGLNEGPLEIIG
GDAGGSDDISDDNDTLGLPQVDVMPRNNSTNEVAEWDVGAEMTMEEAGEL
LLQQRPHLVPAPAMVDGGHSHLAPGLSHVEPRDGDTEMKWERAAMRRLDD
GVKAFQRQEKRQGVAPLVFWGEGGVLLPVVPPAQVDARTSPPAVDSNSTD
DTIEWEREVERQLEEAGKLLRQQNLHLVTAVAVGSHTLLRPGDVYPPLFH
ANGNQDDAPASQHTTTATQDDAPASQHAATALLRPDAFTGAFQCQEEGNA
DSAPPGSSRRTFYPLLFHTNGSQDDASASQHTAATALLRPDAFAGEFQS*
back to top

mRNA from alignment at E-siliculosus-1a_F_contig1193:8533..13494-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E-siliculosus-1a_F_contig1193.1231.1 ID=mRNA_E-siliculosus-1a_F_contig1193.1231.1|Name=mRNA_E-siliculosus-1a_F_contig1193.1231.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=4962bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1193:8533..13494- (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
ATGACTTCCCCACAGGCCGGCTGGAGGAGGTCTCCTGACCCCGTTTTCAC CACCCCTCGCGCCGCCTCTGAGGTCAGCTCTTGGCGAAACCGGCGTCCAG TTGCGGTAAACGAGAACTATCCAGGTGTAAGCAACCTGGAACCGTGGCTC GATGAGATCATCGGTGTCAGCTCTAACAGCAGAAACACTCGAGCCGCCGC TCCAGGCCCGGCCATTGCTGCTACCCCGGCGAGCTGCAGGAGGTGAGCCC CCGCTACGTAGCCTTGCGTGATTGCTCGCCATGTCATATTTTATCTGAAT GTTACCCTCTCTTTAAAAGTCGACGTTTTGGTACATAAGTCTTCTTGTGT GACATGTGGTGACATCTTCAAGGACAGCGAAACACACAGCAGATCCATGC GGGAACCGGGCGGGGCGTGAGCAGCCATCCACGGCGATACAGCAGCGTGG TGGTAGTGTGGATCCCGTCGTGAATTTTGGTCCCGTGTGCAAGTTCCAGT CGTTCGTCCCGCCCATGTTTTCTCTTCCTTTTATCCTCCCTCTCGGTTTA ATTCCAAACAAACACGTCTTTTCATCTCTGTCTTTAACCACTTTCTCCCA GCCACGTTGCTACCCCTGCTGCTGCTGCTTTGAAAGTGCACAGCACAAGC TGCTGGGCATGTATGTACAGCACAAGCACCAACATCATTTTAGTCACGCA CCTAACAGCCAAACCCTAACGAAACAGAAGTTTATCCATCAGACTCCCAC TTCCATATGCACCATATCTAGAGAAGAAAACGAAGAGGGAACAGAGGCTG GAAAACCTCGTCAGACCCCGGTACACCCTGATATCGGTTGCGGTTGTTTT TCTCAACATGTGTCACAAGTCAATCTTCTTCACCTTGTGTAACATGCTCT CTTCGTTCTTGTGGAATAAAAATAGTTCACGGACAGCTCGAATTTCGTTT GCATTAGGGGAACAGCAAAGACAAAGAATGTTTGATACTCATTTTCATGG TGGTGGTGGACTGACATTGTTCTCCCGAGCTATCTATTGTTTCAAGCACA CCAGCAGCATGTTTTGTTACAGTCCACTTCATGCACCGTTTAATTTGGTT GGGCATAGATGGATGCGGTGTACATCGACGGTTCAAGGACCGGACTGTTG GCACGAGGCGAAACAGATAGTACTATATATGCACTATCGGAGGCAACAAA TAAATCTATTGTCTTTTACACCATACGACGGGATGTCGTAAGCCCATGTC CGCCTGCGCTGAATTAGGATAGCCCTGCAATACTGCGCATAGCACTGAAG CCAATAAAGTATAATCAACCAAAACAACTGACATTTTCTCGCGCCCCCTA TTCTAATGCTGTGCAGGGTGCTGGCCAACGCTTGGGCCAGCTTTGAGAGA GCGGACCCGGCGAGAGATACACCTCCGCGGGGTACTTCACAGGTGAGCTC GAGGATCCAAAACTTTAGACTGCGTAAAAGCTTGCTACAGCAGCCCAAGT TTCTGCTACTGCAAAAGCTTAAAGCTGAAGTCCTGCAGATCGGTACCGGT CGGTATTGTGTCCTTGCTTGTCCGTTCATGAACGGATTACATGCCGGCCA TCACCAAACACTCAGCAGGAATTGGGGCAAACATCGAGCAACTGAGGGAA GCTCGCAGCGTGTGGTGTTCTAAGCACCTAGTGAAAAACATTCTTGGTCA AGCGTAGATGAACGGACGATTCAACAGTTAACTCCGACACCCAAAATGAG ATCATTTTGACATTTGCACAGCGTGGCTCTGCAATCAAACCTTTGGAATG GCTCGTTGGTAGCCGTCAACACAAATACACTGAAGCCCTGCCCTTCTTCA GCTGACACCTGACCGCCCTGATTCGTGTACCAATGTCACATCTTGATTTT GTGGTGGTTCTGTGCATCTAATCTGTTCGCGTCCATTCTCGTCCGCCTTC GCCCCCCTCCCCCCCCTGAACAAAATTTATCGCAGGCTACGGGACTCAGT TTGTTCGCCTTGGATCCAGTTCTCGCGGAGACGCGAGAAACGCTGCAGCC GGAGCGCGCCAACTTCGTTCAGCCATCATCCGAACATCCCCGACGCCCGC CGACCCCTCCGACCCGCCCGCCTGCCGCGGAACCCCTTCAAGGGGCTATC GCCCTCTCAACCGAAGAGGCCGACAGCATGCTGGCGCACACGTTTTTGAA GCAGGAGCGCCAATCCGACAACGTCCGCATGGGCTTTCAGATGCTGAGGG GACGCCAGCCCCAGCTCTTCAGTACGTTCACGTCGGGCATAATCGACATG GCCATCGGTCTGACTGCTGGTGCCGGTGTTGTCCCTTCGCACCCTGTGGC CGCCGACACCGTAGCCCTCGCCATCATCAACTTGGCAAGGTTTGTGGCGA CCACTGCAGAGGAGGGGATCGCGAATGACGACCGCGATCTGCTCCCCCTT GTGTGCCTGTTCATGGCCCAAAAGTTAGAGGAGAATGGGTCGGACAACAT CCTCGCCGCGATGCTCGCTATGCGCAACGTGTGGGAGCCCGACCACACGG CAACAAAAAAGCGCGTTGCCAAGCTTGAGGCCAAGGTGTGCGCCAGCCTC AAGTGGGCGCTGTACGCCGTGACGCCCACGACGTTCGGTCACCTGTTCCT CGCTCGTGCGTTGTCGGAGGGCGCTCTCGCAGGAGGGCAGTCTCAAGTGA GGGAGCTCACGACGGTAACGTCGCTCAGATGGGTGCAGCTTGGCTACCTG TCGGAGTTCAAGCCGTCCGAGTTGGCTGCCGCCGCCATGTTCTGCGCCGT GCTCCGTGAATGTGATTTTCAAGCAGCTCGACAGGTCACCGAAGTTGCAA GGAGTGGTGTTGTCGACTTGGAAAGCTCCAGATTCTGGGTGTTGTATCGC GAGGAAGACAGCCACAACGCTGTTCCGACGATAATGGATGCAATCGACGC TGCTGGTGTCGGCATGGGCGCCGACGATAGAGGGACTGACGCAGCGCAGC GGTACATCGATGGAGGCGCCGACAAGACTGAGGGAGGCGGAACGGCATAC GGTTGCAACGACTCTGACACCGAGGGTCCCACGCCGCCACCTACAAGAGA ACCGGGAGAGGCTCTGGAGGCGTTCTTTGCAGATGACCAGCAGGTAAAAT CTCTCTCGCCTGAAAGTTTCTTGCTCGCCCCAACTAGTATTCGCCCTAAC GGATGAACTGTTTCGGTGTTGTCGGAGTCCCTCTTCGTCGCCTGATTTCC CATTTCTCGTCCTCTTCTCTTCCCTCCCTTCAATGACATGACAACATCAG GTCAGCCGAGCCGTCTCAAGCGGCGGTAACACCTCGTCGTCCAACCGGCA AGATATGGGTGAGCCCGAGAACGGTTCCGGGAAAAGCACAACGTCCTCGG CCCGCAGCATCATGGGGGAACGGACTCCGTGTACGACTGGTGAGATGACG GCACCGTCCCGCGAGTTCGCCAGGGCTTCGCGCTTCTCTCCGATTTTGTT GGATGACCGCTACACCGCGACAATGAGCACCGGTGCCTCGCCCTGTCCTT CTGAGCACACTCTCGGGGTCTTGGGCCACGCTCGCGGCAGCGGCGTCGAG ATCTCGGCAGGCACGCCACCCAGCGCGGGCTTCGTCACCTTAACAACCGG AAGCACCCAACAGGCAGCAGTGCGTATATCACCATCTCAGGCGCAAGCAG AACCTGACGTGCGGGGAGCAACGGCCAGAATGAGATCGGTGGGACTCAAT GAAGGCCCCCTCGAGATCATCGGTGGTGATGCCGGCGGTAGCGATGACAT TTCGGACGACAATGATACCCTCGGTCTTCCCCAGGTGGATGTGATGCCCC GAAACAACAGCACCAACGAGGTTGCGGAGTGGGATGTTGGTGCAGAGATG ACGATGGAAGAAGCGGGCGAGTTGTTGCTGCAACAGAGACCTCACCTGGT ACCGGCACCGGCGATGGTCGATGGCGGACACAGTCACCTTGCGCCCGGCC TTTCTCACGTGGAGCCCCGCGATGGCGACACCGAGATGAAGTGGGAGCGA GCCGCCATGCGCAGGTTGGACGACGGCGTCAAGGCGTTCCAGCGGCAAGA AAAGCGGCAGGGCGTTGCACCGCTGGTATTCTGGGGGGAAGGTGGTGTGC TTCTGCCAGTGGTCCCACCCGCGCAGGTCGACGCACGCACAAGCCCCCCC GCTGTCGACAGCAACAGCACCGATGATACTATCGAGTGGGAGCGTGAGGT CGAACGCCAGCTTGAGGAAGCCGGTAAGCTCTTGCGGCAGCAGAACCTTC ACCTGGTGACGGCGGTAGCCGTGGGCAGCCACACACTTCTGCGACCGGGG GATGTTTACCCGCCGCTCTTCCACGCCAACGGCAACCAGGACGATGCCCC GGCTTCGCAGCACACCACCACCGCCACGTTGCTCAGGCCAGATGAAATCG CGGGGGCGTTCCAGTCCCAGGAGGAAGGAAACGTTGCCTCCGCGCCACCG GGTTCCTCCGGGCGAACCTTCTACCCGCCACCCTTCCACACCAACGGGAG CCAGAACGACGCCCCGGCTTCGCAGCACACCACCACCGCCACGTTGCTCA GGCCAGATGAAATCGCGGGGGCGTTCCAGTCCCAGGAGGAAGGAAACGTT GCCTCCGCGCCACCGGGCTTGTCCAGGCGAACCTTCTACCCGCCACCCTT CGACACCAACGGGAGCCAGGACGACGCCCCGGCTTCGCAGCACGCCGCCA CCGCGTTGCTCAGGCCGGACGCATTCACGGGCGCGTTCCAGTGCCAGGAG GAAGGAAACGCGGACTCCGCGCCACCGGGTTCCTCCAGGCGAACCTTCTA CCCGCTGCTCTTCCACACCAACGGGAGCCAGGACGACGCCTCGGCTTCGC AGCACACCGCCGCCACCGCCTTGCTCAGGCCGGATGCGTTCGCGGGCGAG TTCCAGTCCTAG
back to top

Coding sequence (CDS) from alignment at E-siliculosus-1a_F_contig1193:8533..13494-

>mRNA_E-siliculosus-1a_F_contig1193.1231.1 ID=mRNA_E-siliculosus-1a_F_contig1193.1231.1|Name=mRNA_E-siliculosus-1a_F_contig1193.1231.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=5700bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1193:8533..13494- (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
ATGACTTCCCCACAGGCCGGCTGGAGGAGGTCTCCTGACCCCGTTTTCAC
CACCCCTCGCGCCGCCTCTGAGGTCAGCTCTTGGCGAAACCGGCGTCCAG
TTGCGGTAAACGAGAACTATCCAGGTGTAAGCAACCTGGAACCGTGGCTC
GATGAGATCATCGGTGTCAGCTCTAACAGCAGAAACACTCGAGCCGCCGC
TCCAGGCCCGGCCATTGCTGCTACCCCGGCGAGCTGCAGGAGATGACTTC
CCCACAGGCCGGCTGGAGGAGGTCTCCTGACCCCGTTTTCACCACCCCTC
GCGCCGCCTCTGAGGTCAGCTCTTGGCGAAACCGGCGTCCAGTTGCGGTA
AACGAGAACTATCCAGGTGTAAGCAACCTGGAACCGTGGCTCGATGAGAT
CATCGGTGTCAGCTCTAACAGCAGAAACACTCGAGCCGCCGCTCCAGGCC
CGGCCATTGCTGCTACCCCGGCGAGCTGCAGGAGGGTGCTGGCCAACGCT
TGGGCCAGCTTTGAGAGAGCGGACCCGGCGAGAGATACACCTCCGCGGGG
TACTTCACAGGGTGCTGGCCAACGCTTGGGCCAGCTTTGAGAGAGCGGAC
CCGGCGAGAGATACACCTCCGCGGGGTACTTCACAGGCTACGGGACTCAG
TTTGTTCGCCTTGGATCCAGTTCTCGCGGAGACGCGAGAAACGCTGCAGC
CGGAGCGCGCCAACTTCGTTCAGCCATCATCCGAACATCCCCGACGCCCG
CCGACCCCTCCGACCCGCCCGCCTGCCGCGGAACCCCTTCAAGGGGCTAT
CGCCCTCTCAACCGAAGAGGCCGACAGCATGCTGGCGCACACGTTTTTGA
AGCAGGAGCGCCAATCCGACAACGTCCGCATGGGCTTTCAGATGCTGAGG
GGACGCCAGCCCCAGCTCTTCAGTACGTTCACGTCGGGCATAATCGACAT
GGCCATCGGTCTGACTGCTGGTGCCGGTGTTGTCCCTTCGCACCCTGTGG
CCGCCGACACCGTAGCCCTCGCCATCATCAACTTGGCAAGGTTTGTGGCG
ACCACTGCAGAGGAGGGGATCGCGAATGACGACCGCGATCTGCTCCCCCT
TGTGTGCCTGTTCATGGCCCAAAAGTTAGAGGAGAATGGGTCGGACAACA
TCCTCGCCGCGATGCTCGCTATGCGCAACGTGTGGGAGCCCGACCACACG
GCAACAAAAAAGCGCGTTGCCAAGCTTGAGGCCAAGGTGTGCGCCAGCCT
CAAGTGGGCGCTGTACGCCGTGACGCCCACGACGTTCGGTCACCTGTTCC
TCGCTCGTGCGTTGTCGGAGGGCGCTCTCGCAGGAGGGCAGTCTCAAGTG
AGGGAGCTCACGACGGTAACGTCGCTCAGATGGGTGCAGCTTGGCTACCT
GTCGGAGTTCAAGCCGTCCGAGTTGGCTGCCGCCGCCATGTTCTGCGCCG
TGCTCCGTGAATGTGATTTTCAAGCAGCTCGACAGGTCACCGAAGTTGCA
AGGAGTGGTGTTGTCGACTTGGAAAGCTCCAGATTCTGGGTGTTGTATCG
CGAGGAAGACAGCCACAACGCTGTTCCGACGATAATGGATGCAATCGACG
CTGCTGGTGTCGGCATGGGCGCCGACGATAGAGGGACTGACGCAGCGCAG
CGGTACATCGATGGAGGCGCCGACAAGACTGAGGGAGGCGGAACGGCATA
CGGTTGCAACGACTCTGACACCGAGGGTCCCACGCCGCCACCTACAAGAG
AACCGGGAGAGGCTCTGGAGGCGTTCTTTGCAGATGACCAGCAGGCTACG
GGACTCAGTTTGTTCGCCTTGGATCCAGTTCTCGCGGAGACGCGAGAAAC
GCTGCAGCCGGAGCGCGCCAACTTCGTTCAGCCATCATCCGAACATCCCC
GACGCCCGCCGACCCCTCCGACCCGCCCGCCTGCCGCGGAACCCCTTCAA
GGGGCTATCGCCCTCTCAACCGAAGAGGCCGACAGCATGCTGGCGCACAC
GTTTTTGAAGCAGGAGCGCCAATCCGACAACGTCCGCATGGGCTTTCAGA
TGCTGAGGGGACGCCAGCCCCAGCTCTTCAGTACGTTCACGTCGGGCATA
ATCGACATGGCCATCGGTCTGACTGCTGGTGCCGGTGTTGTCCCTTCGCA
CCCTGTGGCCGCCGACACCGTAGCCCTCGCCATCATCAACTTGGCAAGGT
TTGTGGCGACCACTGCAGAGGAGGGGATCGCGAATGACGACCGCGATCTG
CTCCCCCTTGTGTGCCTGTTCATGGCCCAAAAGTTAGAGGAGAATGGGTC
GGACAACATCCTCGCCGCGATGCTCGCTATGCGCAACGTGTGGGAGCCCG
ACCACACGGCAACAAAAAAGCGCGTTGCCAAGCTTGAGGCCAAGGTGTGC
GCCAGCCTCAAGTGGGCGCTGTACGCCGTGACGCCCACGACGTTCGGTCA
CCTGTTCCTCGCTCGTGCGTTGTCGGAGGGCGCTCTCGCAGGAGGGCAGT
CTCAAGTGAGGGAGCTCACGACGGTAACGTCGCTCAGATGGGTGCAGCTT
GGCTACCTGTCGGAGTTCAAGCCGTCCGAGTTGGCTGCCGCCGCCATGTT
CTGCGCCGTGCTCCGTGAATGTGATTTTCAAGCAGCTCGACAGGTCACCG
AAGTTGCAAGGAGTGGTGTTGTCGACTTGGAAAGCTCCAGATTCTGGGTG
TTGTATCGCGAGGAAGACAGCCACAACGCTGTTCCGACGATAATGGATGC
AATCGACGCTGCTGGTGTCGGCATGGGCGCCGACGATAGAGGGACTGACG
CAGCGCAGCGGTACATCGATGGAGGCGCCGACAAGACTGAGGGAGGCGGA
ACGGCATACGGTTGCAACGACTCTGACACCGAGGGTCCCACGCCGCCACC
TACAAGAGAACCGGGAGAGGCTCTGGAGGCGTTCTTTGCAGATGACCAGC
AGGTCAGCCGAGCCGTCTCAAGCGGCGGTAACACCTCGTCGTCCAACCGG
CAAGATATGGGTGAGCCCGAGAACGGTTCCGGGAAAAGCACAACGTCCTC
GGCCCGCAGCATCATGGGGGAACGGACTCCGTGTACGACTGGTGAGATGA
CGGCACCGTCCCGCGAGTTCGCCAGGGCTTCGCGCTTCTCTCCGATTTTG
TTGGATGACCGCTACACCGCGACAATGAGCACCGGTGCCTCGCCCTGTCC
TTCTGAGCACACTCTCGGGGTCTTGGGCCACGCTCGCGGCAGCGGCGTCG
AGATCTCGGCAGGCACGCCACCCAGCGCGGGCTTCGTCACCTTAACAACC
GGAAGCACCCAACAGGCAGCAGTGCGTATATCACCATCTCAGGCGCAAGC
AGAACCTGACGTGCGGGGAGCAACGGCCAGAATGAGATCGGTGGGACTCA
ATGAAGGCCCCCTCGAGATCATCGGTGGTGATGCCGGCGGTAGCGATGAC
ATTTCGGACGACAATGATACCCTCGGTCTTCCCCAGGTGGATGTGATGCC
CCGAAACAACAGCACCAACGAGGTTGCGGAGTGGGATGTTGGTGCAGAGA
TGACGATGGAAGAAGCGGGCGAGTTGTTGCTGCAACAGAGACCTCACCTG
GTACCGGCACCGGCGATGGTCGATGGCGGACACAGTCACCTTGCGCCCGG
CCTTTCTCACGTGGAGCCCCGCGATGGCGACACCGAGATGAAGTGGGAGC
GAGCCGCCATGCGCAGGTTGGACGACGGCGTCAAGGCGTTCCAGCGGCAA
GAAAAGCGGCAGGGCGTTGCACCGCTGGTATTCTGGGGGGAAGGTGGTGT
GCTTCTGCCAGTGGTCCCACCCGCGCAGGTCGACGCACGCACAAGCCCCC
CCGCTGTCGACAGCAACAGCACCGATGATACTATCGAGTGGGAGCGTGAG
GTCGAACGCCAGCTTGAGGAAGCCGGTAAGCTCTTGCGGCAGCAGAACCT
TCACCTGGTGACGGCGGTAGCCGTGGGCAGCCACACACTTCTGCGACCGG
GGGATGTTTACCCGCCGCTCTTCCACGCCAACGGCAACCAGGACGATGCC
CCGGCTTCGCAGCACACCACCACCGCCACGTCAGCCGAGCCGTCTCAAGC
GGCGGTAACACCTCGTCGTCCAACCGGCAAGATATGGGTGAGCCCGAGAA
CGGTTCCGGGAAAAGCACAACGTCCTCGGCCCGCAGCATCATGGGGGAAC
GGACTCCGTGTACGACTGGTGAGATGACGGCACCGTCCCGCGAGTTCGCC
AGGGCTTCGCGCTTCTCTCCGATTTTGTTGGATGACCGCTACACCGCGAC
AATGAGCACCGGTGCCTCGCCCTGTCCTTCTGAGCACACTCTCGGGGTCT
TGGGCCACGCTCGCGGCAGCGGCGTCGAGATCTCGGCAGGCACGCCACCC
AGCGCGGGCTTCGTCACCTTAACAACCGGAAGCACCCAACAGGCAGCAGT
GCGTATATCACCATCTCAGGCGCAAGCAGAACCTGACGTGCGGGGAGCAA
CGGCCAGAATGAGATCGGTGGGACTCAATGAAGGCCCCCTCGAGATCATC
GGTGGTGATGCCGGCGGTAGCGATGACATTTCGGACGACAATGATACCCT
CGGTCTTCCCCAGGTGGATGTGATGCCCCGAAACAACAGCACCAACGAGG
TTGCGGAGTGGGATGTTGGTGCAGAGATGACGATGGAAGAAGCGGGCGAG
TTGTTGCTGCAACAGAGACCTCACCTGGTACCGGCACCGGCGATGGTCGA
TGGCGGACACAGTCACCTTGCGCCCGGCCTTTCTCACGTGGAGCCCCGCG
ATGGCGACACCGAGATGAAGTGGGAGCGAGCCGCCATGCGCAGGTTGGAC
GACGGCGTCAAGGCGTTCCAGCGGCAAGAAAAGCGGCAGGGCGTTGCACC
GCTGGTATTCTGGGGGGAAGGTGGTGTGCTTCTGCCAGTGGTCCCACCCG
CGCAGGTCGACGCACGCACAAGCCCCCCCGCTGTCGACAGCAACAGCACC
GATGATACTATCGAGTGGGAGCGTGAGGTCGAACGCCAGCTTGAGGAAGC
CGGTAAGCTCTTGCGGCAGCAGAACCTTCACCTGGTGACGGCGGTAGCCG
TGGGCAGCCACACACTTCTGCGACCGGGGGATGTTTACCCGCCGCTCTTC
CACGCCAACGGCAACCAGGACGATGCCCCGGCTTCGCAGCACACCACCAC
CGCCACCCAGGACGACGCCCCGGCTTCGCAGCACGCCGCCACCGCGTTGC
TCAGGCCGGACGCATTCACGGGCGCGTTCCAGTGCCAGGAGGAAGGAAAC
GCGGACTCCGCGCCACCGGGTTCCTCCAGGCGAACCTTCTACCCGCTGCT
CTTCCACACCAACGGGAGCCAGGACGACGCCTCGGCTTCGCAGCACACCG
CCGCCACCGCCTTGCTCAGGCCGGATGCGTTCGCGGGCGAGTTCCAGTCC
TAGCCAGGACGACGCCCCGGCTTCGCAGCACGCCGCCACCGCGTTGCTCA
GGCCGGACGCATTCACGGGCGCGTTCCAGTGCCAGGAGGAAGGAAACGCG
GACTCCGCGCCACCGGGTTCCTCCAGGCGAACCTTCTACCCGCTGCTCTT
CCACACCAACGGGAGCCAGGACGACGCCTCGGCTTCGCAGCACACCGCCG
CCACCGCCTTGCTCAGGCCGGATGCGTTCGCGGGCGAGTTCCAGTCCTAG
back to top