mRNA_E-siliculosus-1a_F_contig1191.1223.1 (mRNA) Ectocarpus siliculosus Ec863f_EcPH12_90f female
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Overview
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig1191.1223.1 vs. uniprot
Match: D7G286_ECTSI (Centrin-1, putative n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G286_ECTSI) HSP 1 Score: 1388 bits (3592), Expect = 0.000e+0 Identity = 842/1018 (82.71%), Postives = 854/1018 (83.89%), Query Frame = 1
Query: 1 MSKTATPIATAAXXXXXXXXXXXXXXXARLIKLGRERDLSTAPAWIGFPGLSGVDLTQTQTFPVDKKARPRKRRWGEDWRELVIGASPYNKAAAKARAGRRARAERGASTAADARAEIEEKVSTSLLGVVPEEFCRDAPPAVEPPSSWSP-KAAAVAAGARATNSAEDAAEGVGSGRRPIKIAVESSTTTGSRYAPPSLAAPAATGGGEYVVAGAAHQSGLPTKASGPPRSDQQQQHASRPKRQRGATXXXXXXXXXERNYGERSRRRLAAFLEGQASATXXXXXXXXXXXXXGRAEQGQPCDGSISAVTAGRRDQTF-GLGGDALAPTPPSQSMTANFVGLLEGSLGLGVWTDPVASQLARPLNAVLAYLPPEGARLFDESGRRFTPHGGNHEAEANPPPDNEPSAAHATSPDGKKXXXXXXXXXXTSGIKAAPTGAGRAPTTQGAACISAPGTAASSLLTVTMERGTAEEAPRAVWLGRVAAVMEARGDRDEAVRLYGEAAAELTGKRVGASRNGSRDGSGGTASSCPSAAGMGRSTQLGGGDCGVGAGAGPDLFPYSARAHYLASIIERTYRRHFLRHVTVPSGTKRTVAQTLTAAAFRGYLARVGARKDKTHRSSAATFVARAWRRRMYRLGLATVKFQAIMRGAQGRRKAREIRILIRHTISAQSVVRMFLAKRTAQRMRLEEASAGLLQASQRGFVLRRVRATAISEIHTSLWWAALGLNRVARGFLHRRFAGMVRQFAVDGEITRCEAEAAAVGGAVRLATTRADMYLKTDAGKVELAQEMRRANAAVVRTKILMRGASPEERRRASAHDVFDSFDLDGSGTIDHTELKALLAALGVAITDAELK--------------------------------------------------------------------------------------------------ARRNLRAATGMALQDRARRSVVRRWVSSAAREAQVRFREARPPTLECCACHQAFALYGDYWRHFGGGR 2754
MSKTATPIATAAXXXXXXXXXXXXXXXARLIKLGRERDLSTAPAWIGFPGLSGVDLTQTQTFPVDKKARPRKRRWGEDWRELVIGASPYNKAAAKARAGRRARAERGASTAADARAEIEEKVSTSLLGVVPEEFCRDAPPAVEP SS S KA VAAGARATNSAEDAA+G GSGRRPIKIAVESS TTGSR SLAAPAATGGG+ VVAGAAHQ GLPTKASGPP SDQQQQHASRPKRQRG XXXXXXXXXER GERSRRRLAAFLE Q XXXXXXXXXXXXX RAE+GQPCDGS SAVTAGR+DQTF GLGGDAL PTPPS+SMTANFVGLLEGSLGLGVWTDPVASQLARPLNAVLAYLPPEGARLFDESGRRFTP GG+HEAEAN PPDNEPSAAHATSPDG+K XXXXX TSGIKAAPTGAGR PTTQGAACISAPGTAASSLLTVTMERGTAEEAPRAVWLG+VAAVMEARGDRDEAVRLYGEAAAELTGKR GASR GSRDGSGGTAS CP AAG GRS QLGGGD GVGAGAGPDLFPYSARAHYLASIIERTYRRHFLR RT AQTL AAAFRG+LARVGARKDKTHRSSAATFVARAWRRRMYRLGLATVKFQAI+RGA GRRKAREIRILIRHTISAQSVVRMFLAKRT QRMRLEEASAGLLQA RGFVLRRVRATAISEIHTSLW AALGLNRVARGFLHRRFAGMVRQFAVDGEITRCEAEAAAVGGAVRLATTRADMYL TDAGKVELAQEMRRA AAVVRTKILMRGASPEERRRASAHDVFDSFDLDGSGTIDHTELKALL ALGV IT+AELK ARRNLRAATGMALQDRARRSV+RRWVS AAREAQVRFREA PPTLEC ACHQAFALYGDYWRHFGGGR
Sbjct: 1 MSKTATPIATAAXXXXXXXXXXXXXXXARLIKLGRERDLSTAPAWIGFPGLSGVDLTQTQTFPVDKKARPRKRRWGEDWRELVIGASPYNKAAAKARAGRRARAERGASTAADARAEIEEKVSTSLLGVVPEEFCRDAPPAVEPSSSSSSLKAVTVAAGARATNSAEDAADGAGSGRRPIKIAVESSATTGSRDVSSSLAAPAATGGGDCVVAGAAHQRGLPTKASGPPYSDQQQQHASRPKRQRGXXXXXXXXXXXERRNGERSRRRLAAFLEDQXXXXXXXXXXXXXXXXXXRAEEGQPCDGSNSAVTAGRKDQTFFGLGGDALEPTPPSESMTANFVGLLEGSLGLGVWTDPVASQLARPLNAVLAYLPPEGARLFDESGRRFTPPGGSHEAEANLPPDNEPSAAHATSPDGRKKKTAXXXXXTTSGIKAAPTGAGRGPTTQGAACISAPGTAASSLLTVTMERGTAEEAPRAVWLGQVAAVMEARGDRDEAVRLYGEAAAELTGKREGASRIGSRDGSGGTASPCPPAAGKGRSAQLGGGDRGVGAGAGPDLFPYSARAHYLASIIERTYRRHFLR---------RTAAQTLAAAAFRGHLARVGARKDKTHRSSAATFVARAWRRRMYRLGLATVKFQAIIRGAHGRRKAREIRILIRHTISAQSVVRMFLAKRTTQRMRLEEASAGLLQALHRGFVLRRVRATAISEIHTSLWRAALGLNRVARGFLHRRFAGMVRQFAVDGEITRCEAEAAAVGGAVRLATTRADMYLTTDAGKVELAQEMRRAKAAVVRTKILMRGASPEERRRASAHDVFDSFDLDGSGTIDHTELKALLGALGVGITNAELKVTSAAVDADGSGEISFSEFYAWFGGGGFHGGGDYGVGEALGFRGMTSDTSENWSLRSSPSLSTARSGMEESTAALTSGYRSAEGNGGPRHTARATFVKARRNLRAATGMALQDRARRSVIRRWVSLAAREAQVRFREAWPPTLECWACHQAFALYGDYWRHFGGGR 1009
BLAST of mRNA_E-siliculosus-1a_F_contig1191.1223.1 vs. uniprot
Match: W4GHF5_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=W4GHF5_9STRA) HSP 1 Score: 70.9 bits (172), Expect = 8.250e-9 Identity = 111/412 (26.94%), Postives = 164/412 (39.81%), Query Frame = 1
Query: 1663 FPYSARAHYLASIIERTYRRHFLRHVTVPSGTKRTVAQTLTAAAFRGYLARVGARKDKTHRSSAATFVARAWRRRMYRLGLATVKFQAIMRGAQGRRKAREIRILIRHTISAQSVVRMFLAKRT-AQRMRLEEASAGLLQASQRGFVLRRVRATAISEIHTSLWWAALGLNRVARGFLHRRFAGMVRQFAVDGEITRCEAEAAAVGGAVRLATTRADMYLKTDAGKVELAQEMRRA--NAAVVRTKILMRGA------SPEERRRASAHDVFDSFDLDGSGTIDHTELKALLAALGVAITDAELKA--------------------------------------RRNLRAA------TGMALQDRARRSVVRRWVSSAAREAQVRFREARPPTLECCACHQAFALYGDYWRH 2739
+PYSA AH A +I R Y+ R + ++ V T F + RV + + R + + VAR +R M R LAT A R+I QS R LAKRT A R+ A+ + +A ++ + R R S I T + R +L RR + E R E E + A ++A + +Y T GK E+ +E +R N + +T+ ++ A S ++ + FD+FD DGSG+ID EL+ LL+ LG+ I+D EL+A R LR TG + +A + + R A A+ FR ARPP C CH AF L D++ H
Sbjct: 264 YPYSAHAHNCARMIRRCYQTSCDRR-NMQQKLRQLVRSTRFVQDFLRF--RVHCKVQRRQRRAVQSLVARRLQRPM-RSYLATKHTSA-----------RQI----------QSRWRQVLAKRTLATERRMHRAATSITRACKQFVLSLRRRHVLASRIQT-----------IGRAWLWRRRGRLA-------EAERREVEWRVMKEASKVAMAASVLYFMTADGKAEVKRERKRMRENVKLAKTQQGVQAATSSSPPSKDDLETLAIRHSFDTFDTDGSGSIDVHELRLLLSELGIPISDRELQAGFXXXXXXXXXXXXFDEFAAWWKHGLTAGKAKTQMALLRLKLRGRSLVHKITGAEARAQAAKRIASRRRVDAMIAARDEFRNARPPVSCCHMCHMAFGLDQDWFVH 632
BLAST of mRNA_E-siliculosus-1a_F_contig1191.1223.1 vs. uniprot
Match: A0A1V9YLD2_9STRA (Uncharacterized protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9YLD2_9STRA) HSP 1 Score: 70.5 bits (171), Expect = 1.600e-8 Identity = 100/356 (28.09%), Postives = 145/356 (40.73%), Query Frame = 1
Query: 1855 ATFVARAWRRRMYRLGLATVKFQAIMRGAQGRRKAREIRILIRHT-ISAQSVVRMFLAKRTAQRMRLEEASAGLLQASQRGFVLRRVRATAISEIHTSLWWA-ALGLNR-------------VARGFLHRRFAGMVRQFAVDGEITRCEAEAAAVGGAVRLATTRADMYLKTDAG--KV-ELAQEMRRANAAVVRTKILMRGASPEERRRASAHDVFDSFDLDGSGTIDHTELKALLAALGV----------------------------AITDAE-----------LKARRNLRAA----TGMALQDRARRSVVRRWVSSAAREAQVRFREARPPTLECCACHQAFALYGDYWRH 2739
AT + +RRR R AT + Q RG RR R L + + + Q + A + A R+R++ A+ L + V+R RAT LW AL R V RGFL RR +R+ E+TR E A + + ++YL +AG +V +LA++++ +A R+++ +P + RRA DVF S+D+DGSGTID ELK L LG+ A +A LKA+ LRA T + ARR + + E + FR PP C CH F Y +W+H
Sbjct: 382 ATTIQMLYRRRHRRRVRATWRLQTAWRGFHARRAYARRRWLRQESAVYIQRWWHVHTADKEAMRLRIQTAARRKLARLR---VVRLHRATKCLHKWVRLWLVRALARIRLGXXXXXXXXXXXVVRGFLGRRRVRWLRKVIAADEVTRLTQEEAYIERFSTIRLKDFNLYL-AEAGVRRVRDLAKKLKADDALRARSRVHW---TPTQLRRARLQDVFASYDMDGSGTIDADELKPLFDELGIPMDRXXXXXXXXXXXXXXXXXXXXXXFCAYLEAPERAGGPAGLWLLKAQLGLRAVANWFTAATYKAHARRRLAHEERTRLRPELRQAFRADYPPRFACPLCHAPFCFYMPFWQH 730
BLAST of mRNA_E-siliculosus-1a_F_contig1191.1223.1 vs. uniprot
Match: A0A067C2L8_SAPPC (Uncharacterized protein n=1 Tax=Saprolegnia parasitica (strain CBS 223.65) TaxID=695850 RepID=A0A067C2L8_SAPPC) HSP 1 Score: 70.1 bits (170), Expect = 2.090e-8 Identity = 102/403 (25.31%), Postives = 151/403 (37.47%), Query Frame = 1
Query: 1663 FPYSARAHYLASIIERTYRRHFLRHVTVPSGTKRTVAQTLTAAAFRGYLARVGARKDKTHRSSAATFVARAWRRRMYRLGLATVKFQAIMRGAQGRRKAREIRILIRHTISAQSVVRMFLAKRTAQRMRLEEASAGLLQASQRGFVLRRVRATAISEIHTSLWWAALGLNRVARGFLHRRFAGMVRQFAVDGEITRCEAEAAAVGGAVRLATTRADMYLKT--DAGKVELAQEMRRANAAVVRTKILMRGASPEERRRASAHDVFDSFDLDGSGTIDHTELKALL---------AALGVAIT---------------------------------DAELKARRNLRAATGMALQDRARRSVVRRWVSSAAREAQVRFREARPPTLECCACHQAFALYGDYWRH 2739
F Y+ H AS+++ YRR LR R A +RG+ R ++ HR ++A ++ R W R T +A+ Q + + +L+R A V+R + A L+ A R + R +RA A + R+ RGFL RR +R V E+ R EA + R R + +L AG+ + Q +R K +P RRA+ D+F S+D+DGSGTID EL+ L A+L AI A+L+ +R T ++ ARR +V A+ + FR P C C AFALY +WRH
Sbjct: 371 FNYTLEVHAKASLLQMRYRRRHLR---------RARAALRLQTVWRGFHDRRRFKRRLWHRQASALYIQRWWHVR-------TADKEAMRLRLQTAARRKLAYLLVRRMRKAHKVLRASI-------------HAWLVCALARLRLRRAIRA-------------ATNIQRLVRGFLSRRAVLRLRDRIVRDEVARSSREADYIQ---RFTAIRLEDFLLFLHQAGQSHVHQLAQRLKDEATARKRARAHWAPAAMRRAALEDLFASYDVDGSGTIDVDELQHLFDELCIPMDAASLAQAIRLMDTSRNGSVDMSEFCAYLEAPPPQSNAGLWKLHAQLQLQRVANWFTSATFKNEARRRLVYDETQRQAQLLRTEFRMTEHPRFACPYCGAAFALYRPFWRH 728
BLAST of mRNA_E-siliculosus-1a_F_contig1191.1223.1 vs. uniprot
Match: A0A6G0WAC7_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WAC7_9STRA) HSP 1 Score: 68.6 bits (166), Expect = 6.060e-8 Identity = 103/419 (24.58%), Postives = 148/419 (35.32%), Query Frame = 1
Query: 1636 VGAGAGPDLFPYSARAHYLASIIERTYRRHFLRHVTVPSGTKRTVAQTLTAAAFRGYLARVGARKDKTHRSSAATFVARAWRRRMYRLGLATVKFQAIMRGAQGRRKAREIRILIRHTISAQSVVRMFLAKRTAQRMRLEEASAGLLQASQRGFVLRRVRATAISEIHTSLWWAALGLNRVARGFLHRRFAGMVRQFAVDGEITRCEAEAAAVGGAVRLATTRADMYLK-TDAGKVELAQEMRRANAAVVRTKILMRGASPEERRRASAHDVFDSFDLDGSGTIDHTELKALLAALGVAIT-----------DAE-----------------------------------LKARRNLRAATGMALQDRARRSVVRRWVSSAAREAQ----VRFREARPPTLECCACHQAFALYGDYWRH 2739
+GA P F Y AH AS I+R Y R + R+ A A +RG+ R K + +A + R W R R+ +R+ Q+ +R LA+ +R LQ + + ++ A+ H + L R RG + R +++ D E R AE A V + LK T G + L++ R A V R S +RRRA HDVFD++D+D SGTID EL+ L LG+AI DA+ LK + N++ D + R V +++ Q FR RPP C C FALY +WRH
Sbjct: 338 LGATPAPWGFHYDLSAHKKASTIQRLYHRRY---------RLRSTAAVQVARVWRGFRTRRRLVKARRRADQSAARLQRWWHR------------------CNRHRETMRLRL--------QTAMRAKLARLHVHALRQRRLLMRNLQLLVKAWRVQHNSLQALRRKHGYAHFCQLTKERWLRGVIARYRVRKLKRALQDEEAARYAAECAFVDLHLEPKLRDFQRLLKSTRGGAMRLSRLALRLKAEAVARDEARRHWSVADRRRAQIHDVFDTYDVDKSGTIDSNELRHLFDELGIAIDAGGLAEALKAMDADGSGSIEFDEFYAWLHAPPPPSSTSRHLREGSTLVFLKMKLNVKQFVNRFTDDSFAQHAARLLVFEESQKTQDALRKSFRVTRPPRFACRFCGTPFALYKAFWRH 721
BLAST of mRNA_E-siliculosus-1a_F_contig1191.1223.1 vs. uniprot
Match: A0A024UUQ2_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024UUQ2_9STRA) HSP 1 Score: 62.0 bits (149), Expect = 6.140e-6 Identity = 100/368 (27.17%), Postives = 140/368 (38.04%), Query Frame = 1
Query: 1864 VARAWRRRMYRLGLATVKFQAIMRGAQGRRKAREIRILIRHTISAQSVVRMFLA---KRTAQRMRLEEASAGLL-------QASQRGFV--LRRVRATAISEIHTSL---------WWAALGLNRVARGFLHRRFAGMVRQFAVDGEITRCEAEAAAVGGAVRLATTRADMYLKTDAGKVELAQEMRRANAAVVRTKILMRGAS----PEERRRASAHDVFDSFDLDGSGTIDHTELKALLAALGVAITD-------AELKARRN-----------LRAATGMALQDRARR----------------SVVRRWVSS-----AAR------------EAQVRFREARPPTLECCACHQAFALYGDYWRH 2739
+A+A+R R L A+ Q RG RR + R L +SA + R + A + A R+R++ A L + Q+ V LR++ + E H+ + AL +R RG+L R ++ E R E A V V + + L + + L +R + T I A P ERRRA DVFD++D+DGSG++D ELK+L LG+AI A + A N L A R RR ++ RW + AAR QV FR PP C C AFALY YW H
Sbjct: 377 MAKAYRHRFSNLIAASTTVQRYYRGFHTRRMLAKKRWLAH--VSAACIQRWWRACNRHKEAMRVRIQTAMRKKLACKKVHVRRQQKKLVRNLRQLVRAWVLEFHSLQKRRRRLGLEQFYALTKDRWLRGYLARYRVRQLKCRLERDEAARSTRERAFVSSNVAVKMATFECQLNSASTTSLLGTRRKRLTLQLKATAIERTAARKHLPPVERRRAQVRDVFDAYDVDGSGSMDSRELKSLFDELGIAIDRRGLQDALAAIDADHNGVVDFDEFYNWLDTAPTQRHNGRRRRLDRPELVFLKMKLSMKHLLNRWTDASFSQHAARLLYHDESLRQTSAMQVAFRRTEPPRFACVYCGMAFALYKPYWAH 742
BLAST of mRNA_E-siliculosus-1a_F_contig1191.1223.1 vs. uniprot
Match: A0A485KZV7_9STRA (Aste57867_13764 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KZV7_9STRA) HSP 1 Score: 59.7 bits (143), Expect = 3.180e-5 Identity = 49/146 (33.56%), Postives = 69/146 (47.26%), Query Frame = 1
Query: 2152 WAALGLNRVARGFLHRRFAGMVRQFAVDGEITRCEAE-------------------AAAVGGAVRLATTRADMYLKTDAGKVELAQEMRRANAAVVRTKILMRGASPEERRRASAHDVFDSFDLDGSGTIDHTELKALLAALGVAI 2532
+ L +R RG+L R+F +++ V E R AE AA GA R+ +R + LKTDA ++ ++ +R SP E RRA DVFD++D+DGSGTID EL+ L LG+AI
Sbjct: 602 YVGLTKDRWIRGYLARQFVKRLKRRIVLDEAARYAAECAYIDAHCGVKMNAFERSLAATAAGAARV--SRLALRLKTDAAHRDVDRKRQRL--------------SPAELRRAQMRDVFDAYDVDGSGTIDTDELRYLFDELGIAI 731 The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig1191.1223.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90) Total hits: 7
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-siliculosus-1a_F_contig1191.1223.1 >prot_E-siliculosus-1a_F_contig1191.1223.1 ID=prot_E-siliculosus-1a_F_contig1191.1223.1|Name=mRNA_E-siliculosus-1a_F_contig1191.1223.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=922bp MSKTATPIATAAAANAAAKKRRQNDDDARLIKLGRERDLSTAPAWIGFPGback to top mRNA from alignment at E-siliculosus-1a_F_contig1191:18331..27779- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-siliculosus-1a_F_contig1191.1223.1 ID=mRNA_E-siliculosus-1a_F_contig1191.1223.1|Name=mRNA_E-siliculosus-1a_F_contig1191.1223.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=9449bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1191:18331..27779- (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top Coding sequence (CDS) from alignment at E-siliculosus-1a_F_contig1191:18331..27779- >mRNA_E-siliculosus-1a_F_contig1191.1223.1 ID=mRNA_E-siliculosus-1a_F_contig1191.1223.1|Name=mRNA_E-siliculosus-1a_F_contig1191.1223.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=5532bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1191:18331..27779- (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top |