mRNA_E-siliculosus-1a_F_contig1190.1220.1 (mRNA) Ectocarpus siliculosus Ec863f_EcPH12_90f female
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Overview
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig1190.1220.1 vs. uniprot
Match: D7G0Y2_ECTSI (Glucosidase 2 subunit beta n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0Y2_ECTSI) HSP 1 Score: 110 bits (275), Expect = 5.450e-27 Identity = 50/51 (98.04%), Postives = 50/51 (98.04%), Query Frame = 1
Query: 1 GVFECANRGHRSVRLPSSRVGDGVCDCCDGSDEPAGACKTSCEEASEEWVA 153
GVFECANRGHRSVRLPSSRVGDGVCDCCDGSDEPAGACK SCEEASEEWVA
Sbjct: 116 GVFECANRGHRSVRLPSSRVGDGVCDCCDGSDEPAGACKASCEEASEEWVA 166
BLAST of mRNA_E-siliculosus-1a_F_contig1190.1220.1 vs. uniprot
Match: A0A6H5KIQ9_9PHAE (Glucosidase 2 subunit beta n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KIQ9_9PHAE) HSP 1 Score: 104 bits (260), Expect = 5.990e-25 Identity = 47/51 (92.16%), Postives = 48/51 (94.12%), Query Frame = 1
Query: 1 GVFECANRGHRSVRLPSSRVGDGVCDCCDGSDEPAGACKTSCEEASEEWVA 153
GVFECANRGH SVRLPSSRVGDGVCDCCDGSDEPAG CK SCEEA+EEWVA
Sbjct: 126 GVFECANRGHWSVRLPSSRVGDGVCDCCDGSDEPAGVCKASCEEAAEEWVA 176
BLAST of mRNA_E-siliculosus-1a_F_contig1190.1220.1 vs. uniprot
Match: A0A812L8W4_9DINO (Glucosidase 2 subunit beta n=1 Tax=Symbiodinium sp. KB8 TaxID=230985 RepID=A0A812L8W4_9DINO) HSP 1 Score: 75.5 bits (184), Expect = 8.880e-15 Identity = 34/49 (69.39%), Postives = 37/49 (75.51%), Query Frame = 1
Query: 1 GVFECANRGHRSVRLPSSRVGDGVCDCCDGSDEPAGACKTSCEEASEEW 147
G F C N+G R V LPSSRVGDGVCDCCDGSDEP G C +C+EA EW
Sbjct: 38 GKFYCVNKGFRGVYLPSSRVGDGVCDCCDGSDEP-GTCADTCDEAGAEW 85
BLAST of mRNA_E-siliculosus-1a_F_contig1190.1220.1 vs. uniprot
Match: A0A067LUJ6_9AGAM (Glucosidase 2 subunit beta n=1 Tax=Botryobasidium botryosum FD-172 SS1 TaxID=930990 RepID=A0A067LUJ6_9AGAM) HSP 1 Score: 66.2 bits (160), Expect = 2.090e-11 Identity = 30/53 (56.60%), Postives = 38/53 (71.70%), Query Frame = 1
Query: 1 GVFECANRGHRSVRLPSSRVGDGVCD--CCDGSDEPAGACKTSCEEASEEWVA 153
G+F CAN GH S ++ SSRV DG+C+ CCDGSDEP+G C CEE +E+ A
Sbjct: 82 GLFYCANEGHVSAKIRSSRVNDGLCEPECCDGSDEPSGVCPNICEEIGKEYRA 134
BLAST of mRNA_E-siliculosus-1a_F_contig1190.1220.1 vs. uniprot
Match: D8LWM6_BLAHO (PRKCSH-like domain-containing protein n=1 Tax=Blastocystis hominis TaxID=12968 RepID=D8LWM6_BLAHO) HSP 1 Score: 61.2 bits (147), Expect = 4.670e-11 Identity = 24/40 (60.00%), Postives = 31/40 (77.50%), Query Frame = 1
Query: 7 FECANRGHRSVRLPSSRVGDGVCDCCDGSDEPAGACKTSC 126
F C N+G++SV++ SSRV DG+CDCCDGSDE G C+ C
Sbjct: 30 FTCENKGYKSVKIYSSRVNDGICDCCDGSDEKEGVCENVC 69
BLAST of mRNA_E-siliculosus-1a_F_contig1190.1220.1 vs. uniprot
Match: A0A7R9U1R5_9VIRI (Glucosidase 2 subunit beta n=1 Tax=Prasinoderma coloniale TaxID=156133 RepID=A0A7R9U1R5_9VIRI) HSP 1 Score: 63.2 bits (152), Expect = 2.510e-10 Identity = 26/51 (50.98%), Postives = 35/51 (68.63%), Query Frame = 1
Query: 1 GVFECANRGHRSVRLPSSRVGDGVCDCCDGSDEPAGACKTSCEEASEEWVA 153
G F C N G+ + + ++RVGDGVCDCCDG+DEP G C +C++ E VA
Sbjct: 14 GAFRCENAGYEAALVSAARVGDGVCDCCDGTDEPKGMCGNTCDKELAERVA 64
BLAST of mRNA_E-siliculosus-1a_F_contig1190.1220.1 vs. uniprot
Match: A0A8J5BXR8_9ASCO (Glucosidase 2 subunit beta n=1 Tax=Yarrowia sp. B02 TaxID=2768839 RepID=A0A8J5BXR8_9ASCO) HSP 1 Score: 63.2 bits (152), Expect = 2.530e-10 Identity = 31/53 (58.49%), Postives = 35/53 (66.04%), Query Frame = 1
Query: 4 VFECANRGHRSVRLPSSRVGDGVCD---CCDGSDEPAGACKTSCEEASEEWVA 153
F CAN+GH RLPS+RVGDG+CD CCDGSDE G C C E + E VA
Sbjct: 83 TFYCANKGHIPGRLPSNRVGDGICDYDLCCDGSDEEDGICPNVCAEKAAERVA 135
BLAST of mRNA_E-siliculosus-1a_F_contig1190.1220.1 vs. uniprot
Match: A0A4Q2DHE9_9AGAR (Glucosidase 2 subunit beta n=1 Tax=Candolleomyces aberdarensis TaxID=2316362 RepID=A0A4Q2DHE9_9AGAR) HSP 1 Score: 63.2 bits (152), Expect = 2.550e-10 Identity = 29/49 (59.18%), Postives = 34/49 (69.39%), Query Frame = 1
Query: 7 FECANRGHRSVRLPSSRVGDGVC--DCCDGSDEPAGACKTSCEEASEEW 147
F C N GH +PSSRVGDG+C DCCDGSDE +G CK SC+E E +
Sbjct: 79 FWCQNNGHIGAYIPSSRVGDGLCEPDCCDGSDELSGVCKDSCKEVGEAY 127
BLAST of mRNA_E-siliculosus-1a_F_contig1190.1220.1 vs. uniprot
Match: A0A6A0A7H2_HAELA (PRKCSH-like domain-containing protein (Fragment) n=1 Tax=Haematococcus lacustris TaxID=44745 RepID=A0A6A0A7H2_HAELA) HSP 1 Score: 60.5 bits (145), Expect = 4.920e-10 Identity = 27/46 (58.70%), Postives = 32/46 (69.57%), Query Frame = 1
Query: 1 GVFECANRGHRSVRLPSSRVGDGVCDCCDGSDEPAGACKTSCEEAS 138
G F CANRG+ +L +S V DGVCDCCDGSDE G CK +C + S
Sbjct: 23 GSFYCANRGYEPQQLSASFVDDGVCDCCDGSDEARGRCKNTCLDKS 68
BLAST of mRNA_E-siliculosus-1a_F_contig1190.1220.1 vs. uniprot
Match: Q6C4G9_YARLI (Glucosidase 2 subunit beta n=3 Tax=Yarrowia TaxID=4951 RepID=Q6C4G9_YARLI) HSP 1 Score: 61.6 bits (148), Expect = 8.840e-10 Identity = 29/52 (55.77%), Postives = 34/52 (65.38%), Query Frame = 1
Query: 4 VFECANRGHRSVRLPSSRVGDGVCD---CCDGSDEPAGACKTSCEEASEEWV 150
F CAN+GH RLPS+RVGDG+CD CCDGSDE G C C E + E +
Sbjct: 83 TFYCANKGHIPGRLPSNRVGDGICDSDICCDGSDEDDGICPNVCAEMAAERI 134 The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig1190.1220.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-siliculosus-1a_F_contig1190.1220.1 >prot_E-siliculosus-1a_F_contig1190.1220.1 ID=prot_E-siliculosus-1a_F_contig1190.1220.1|Name=mRNA_E-siliculosus-1a_F_contig1190.1220.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=51bp GVFECANRGHRSVRLPSSRVGDGVCDCCDGSDEPAGACKTSCEEASEEWVback to top mRNA from alignment at E-siliculosus-1a_F_contig1190:35523..35675+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-siliculosus-1a_F_contig1190.1220.1 ID=mRNA_E-siliculosus-1a_F_contig1190.1220.1|Name=mRNA_E-siliculosus-1a_F_contig1190.1220.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=153bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1190:35523..35675+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top Coding sequence (CDS) from alignment at E-siliculosus-1a_F_contig1190:35523..35675+ >mRNA_E-siliculosus-1a_F_contig1190.1220.1 ID=mRNA_E-siliculosus-1a_F_contig1190.1220.1|Name=mRNA_E-siliculosus-1a_F_contig1190.1220.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=306bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1190:35523..35675+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top |