mRNA_E-siliculosus-1a_F_contig119.1213.1 (mRNA) Ectocarpus siliculosus Ec863f_EcPH12_90f female
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Overview
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig119.1213.1 vs. uniprot
Match: D7FYT2_ECTSI (DUF3752 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FYT2_ECTSI) HSP 1 Score: 830 bits (2145), Expect = 4.170e-300 Identity = 452/470 (96.17%), Postives = 457/470 (97.23%), Query Frame = 3
Query: 36 MKDLTATEKEEAAQLLVSMLAAAPPLANELGELLDALDEGETVFVDGVKDATLRSQLAAFLTALGLAAPAGKGNKSFRCSGGGVLRGVAALMDEQDLAEPLPLDKEAAFNSAKEASTGGESRHVVDRLAGEQGMEGVREEVPGLLDQILGGELVMLEGLPDERIRAALTLLFEAIGLKSRTAGDGGEAGYGIPDRGYEDSEAVIKKVIAEYGGEQSKAKDSSDDEGGENDGPAPRRAPIGPAMPSQAMLAQAQQAAKDFVQEDSSSDDDEDQFGPSVAGKEKRVASERTDPNRAKRQKRQELKRAAEWENATGVITGGQAALDKAEAEVGREEWMLVPPKSLGVLGAIKTLQPTNRKFQTRSARGARADLHAPKAPKSKAEMEAEAAAEELMAKHREARGASLVERHASDVSKAKKAAGGRDGGKKTFSWSREEDFEQRKKFTPQMYEELVQKSQELDSKFSRSISRNFL 1445
MKDLTATEKEEAAQLLVSMLAAAPPLANELGELLDALDEGETVFV GVKDATLRSQLAAFLTALGLAAPAGKGNKSFRCSGGGVLRGVAALMDEQDLA+PLPLD+EAAFNSAKE VVDRLAGEQGMEGVREEVPGLLDQILGGELVMLEGLPDER+RAALTLLFEAIGLKSRTAGDGGEAGYGIPDRGYEDSEAVIKKVIAEYGGEQSK KDSSDDEGGENDGPAPRRAPIGPAMPSQAMLAQAQQAAKDFVQEDSSSDDDEDQFGPS+AGKEKRVASER DPNRAKRQKRQELKRAAEWENATGVITGGQAALDKAEAEVGREEWMLVPPKSLGVLGAIKTLQPTNRKFQTRSARGARADLHAPKAPKSKAEMEAEAAAEELMAKHREARGASLVERHASDVSKAKKAAGG DGGKK+FSWSREEDFEQRKKFTPQMYEELVQKSQELDSKFSRSISRNFL
Sbjct: 1 MKDLTATEKEEAAQLLVSMLAAAPPLANELGELLDALDEGETVFVGGVKDATLRSQLAAFLTALGLAAPAGKGNKSFRCSGGGVLRGVAALMDEQDLADPLPLDREAAFNSAKE---------VVDRLAGEQGMEGVREEVPGLLDQILGGELVMLEGLPDERVRAALTLLFEAIGLKSRTAGDGGEAGYGIPDRGYEDSEAVIKKVIAEYGGEQSKPKDSSDDEGGENDGPAPRRAPIGPAMPSQAMLAQAQQAAKDFVQEDSSSDDDEDQFGPSIAGKEKRVASERADPNRAKRQKRQELKRAAEWENATGVITGGQAALDKAEAEVGREEWMLVPPKSLGVLGAIKTLQPTNRKFQTRSARGARADLHAPKAPKSKAEMEAEAAAEELMAKHREARGASLVERHASDVSKAKKAAGGGDGGKKSFSWSREEDFEQRKKFTPQMYEELVQKSQELDSKFSRSISRNFL 461
BLAST of mRNA_E-siliculosus-1a_F_contig119.1213.1 vs. uniprot
Match: A0A835YLN1_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YLN1_9STRA) HSP 1 Score: 192 bits (487), Expect = 1.470e-49 Identity = 188/540 (34.81%), Postives = 253/540 (46.85%), Query Frame = 3
Query: 66 EAAQLLVSMLAAAPPLANELGELLDALDEGETVFVDGVKDATLRSQLAAFLTALGLA-------------APAGKGNKSFRCSGGGVLRGVAALMDEQDLAEP--LPLDKEAAFNSAKEASTGGESRHVVDRLAGEQGMEGVREEVPGLLDQILGGELVMLEGLPDERIRAALTLLFEAIGLKSRTAG---DGGEAGYGIP--------------DRGYEDSEAVIKKVIAEY--GGEQSKAKDSSDDEGGENDGPA--PRRAP-------IGPAMPSQAMLAQAQQAAKDFVQEDSSSDDDEDQFGPSVAGKEKRVASERTDPNRAKRQKRQELKRAAEWENATGVITGGQAALDKAEAEVGREEWMLVPPKSLGVLGAIKTL-QPTNRKFQTRSARGARADLHAPKA-PKSKAEMEAEAAAEELMAKHREARGASLVERHAS----DVSK--------------AKKAAG----------------GRDGGKKTFSWSREEDFEQR-KKFTPQMYEELVQKSQELDSKFSRSISRNFL 1445
E+ QLL +ML + P L EL LL+A+D GE V +DGV +A L+ LAA L LGL A G G S + +L+D L E P D A KE +V +A +GMEG+ E+P L+ Q+L GELV++ + D+ +R L +FEA+GL +T DG GYG+P ++ E + V+ Y E ++ +E GE A P +P IGP P A+L QA Q + + SD +D GPS + +R A R P W T G AA A REEWM+VPPK+LG+LGA+KTL QPT+RKFQT S GA PKA PK+KA++E E AAEELMA+HR RG SL + H+ V+K A AAG G G F+WSREE EQ+ ++ TPQ Y L++ S+ LDSKFS+ +++NF+
Sbjct: 127 ESLQLLTAMLCSFPALPTELASLLEAVDAGEAVCLDGVGNAKLKLMLAALLKHLGLERHGDDETSLTFRHAETGDGTPSSMSK-------LCSLLDHHGLVEAPVCPPDATTALAQCKE---------LVAEMAAREGMEGIGGELPALMQQLLSGELVVVSDVGDDTLRDFLVNIFEALGLVLQTRDGDDDGASEGYGLPTSTSTAAGAAAQVEEQYIEACRQAVTLVMDTYVSASEAVAQPAATGEEAGEGGAAAAPPETSPEPKAPRSIGPMRPPAALLEQAAQMSSALAKRPLDSDSSDDDVGPSTSHV-RRPARHR--PXXXXXXXXXXXXXXXXW---TKTPAAGTAA-----ASTVREEWMMVPPKNLGILGALKTLAQPTSRKFQTGSKAGA-----VPKAVPKTKAQLEEERAAEELMAQHRAMRGPSLADMHSGKSKQQVAKERAQRAREEAARNQAMTAAGVQVTQLGASSAPSRGTGSGAGGSGFAWSREESMEQQHRRMTPQQYRALLETSKGLDSKFSKEVTKNFM 634
BLAST of mRNA_E-siliculosus-1a_F_contig119.1213.1 vs. uniprot
Match: A0A7S3YEG5_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3YEG5_HETAK) HSP 1 Score: 68.2 bits (165), Expect = 3.550e-9 Identity = 56/150 (37.33%), Postives = 82/150 (54.67%), Query Frame = 3
Query: 1026 REEWMLVPPKSLGVLGAIKTLQPTNRKFQTRSARGARADLHA-PKAPKSKAEMEAEAAAEELMAKHREARGASLVERHASD------VSKAKKAAGGRDGGKKTFSWSREEDF---EQRKKFTPQMYEELVQKSQELDSKFSRSISRNFL 1445
REEWM+ P ++ ++ L PTNR FQT+S RG ++ A P P SK + A EE++AKH+E RG SLVERH + G + +K+ + S + DF KK EL++++ LDS+FSRS+S++FL
Sbjct: 88 REEWMMTPGEAKSLIPG--GLMPTNRTFQTKSLRGKNSEAAAGPALPVSKEQALENARVEEVLAKHKELRGDSLVERHQKEQXXXXXXXXXXXXKGPKVDPRKSKNISFDRDFLIEGASKKLDKSRAAELMKRAAGLDSRFSRSVSKSFL 235
BLAST of mRNA_E-siliculosus-1a_F_contig119.1213.1 vs. uniprot
Match: K3WPT9_GLOUD (DUF3752 domain-containing protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WPT9_GLOUD) HSP 1 Score: 68.6 bits (166), Expect = 1.550e-8 Identity = 112/405 (27.65%), Postives = 175/405 (43.21%), Query Frame = 3
Query: 435 MEGVREEVPGLLDQIL-------GGELVMLEGLPDERIRAALTLLFEAIGLKSRTAGDGGEAGYGIPDRGYEDSEAVIKKVI------AEYGGEQSKAKDSSDDEGGENDGPAPRRAPIGPAMPSQAMLAQAQQAAKDFVQEDSSSDDDEDQFGPSVAG-KEKRVASERTDPNRAKRQKRQELKRAAEWENATGVITGGQAALDKAEAEVGREEWMLVPPKSL--------------GVLGAIKTLQPT-------NRKFQTRSARGARADL---------HAPKAPKSK-----------------------AEMEAEAAAEELMAKHREARGASLVERHASDVSKAKKAAGGRDGGKKTFSWSREEDFEQRKKFTPQMYEELVQKSQELDSKFSR-SISRNFL 1445
++G+ E P LL +++ GE+ ++ G+ ++RIR+ L LF +GL + G RG S+ + +V G E S+ K + E GP+ IGPAMP L AA E SDDD+D GP++ G K RVA ER + A+R ELK+A EW+ A G+ G A K + R+EWM V P+S G A ++ +P + + AR A+ D+ + P A S A EA+ + M + R+ RG SL+E+H +++ KA+G + GK W+RE D R+ + ++++ S+ ++SKF+ +ISR FL
Sbjct: 82 VKGLLGEFPELLSELITLLQMLDDGEVAVISGIENKRIRSQLKTLFPLLGLTKLSEPKG------FAKRGKAQSDTSLLEVFQRMLTGGNVGDEASRVKRDA-----ERIGPS-----IGPAMP----LGGLPGAATSSTYE---SDDDDDVVGPALPGMKGFRVADERVEAEMARRAL--ELKQA-EWDRARGIT--GDAKDGKDAPKQTRQEWMTVMPESSFFKDSLAPANRGPPGKPAAFRSKEPAAVDHTWFDAPEERDRARRAKLDMELLGYVRDENKPTASSSSSASRLAATGNQQSGGVNESIVPAANPEADEQMRKQMEQLRQERGPSLLEQHQKRLAEEAKASGNK--GKAQTGWNRERDLTARRGMSNDDAAKILEASRGINSKFTAPTISRQFL 456
BLAST of mRNA_E-siliculosus-1a_F_contig119.1213.1 vs. uniprot
Match: A0A6G0NSQ5_9STRA (DUF3752 domain-containing protein n=4 Tax=Phytophthora TaxID=4783 RepID=A0A6G0NSQ5_9STRA) HSP 1 Score: 57.8 bits (138), Expect = 4.050e-5 Identity = 103/396 (26.01%), Postives = 176/396 (44.44%), Query Frame = 3
Query: 450 EEVPGLLDQILGGELVMLEGLPDERIRAALTLLFEAIGLKSRTAGDGGEA-GYGIPDRGYEDSEAVIKKVIAEYGG--------EQSKAKDSSDDEGGENDGPAP--RRAPIGPAMPSQAMLAQAQQAAKDFVQEDSSSDDDEDQFGPSVAG-KEKRVASERTDPNRAKRQKRQELKRAAEWENATGVITGGQAALDKAEAEVGREEWMLVPPKSL--------------GVLGAIKTLQPT-------NRKFQTRSARGARADL---------HAPKAPKSK------------------AEMEAEAAAEELMAKHREARGASLVERHASDVSKAKKAAGGRDGGKKTFS---WSREEDFEQRKKFTPQMYEELVQKSQELDSKFSR-SISRNFL 1445
+++ GLL + GE+ ++ G+ + RIR+ L LF +GL G A + G E +++++++ GG E ++ KD E + P P R PIGPA+P + + ++ Q+D DDDE+ GP++ G K R+A ER + A+ K QEL++ +WE A + +A + + V RE WM + P+S G A ++ +P + + A+ A+ D+ +AP A + A EA+ + M R+ARG SL+E+H + K+A + G K T S W R+ D R+ + E ++ +++++SKF+ +ISR FL
Sbjct: 88 KDLLGLLQMMDDGEVAVIGGIENRRIRSKLKELFPLLGLVKLREPKGAFAKSRKAQNNGGESLMEILQRMLS--GGNDNNVQSIETAERKDDLSTEEAKPAAPKPVKRELPIGPALPPPSA-----KISRSNFQDD---DDDEEVVGPALPGMKGFRLADERVEAEMAR--KAQELEKE-QWERARDGGSSKKADMARIAPMV-REAWMTMMPESSILKDSLGPQNRPPPGKPAAFRSKEPAAVDKTWFDSPEERERAKRAKLDMELLGYVREENAPSAATASSVTSSTAQPAVNESILPNANPEADEEMRKQMDSLRKARGPSLLEQH-----QRKQAEQAKTGAKSTQSSGRWKRDRDLTARRGMSGDDAERMISAAKQINSKFTAPAISRQFL 464 The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig119.1213.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90) Total hits: 5
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-siliculosus-1a_F_contig119.1213.1 >prot_E-siliculosus-1a_F_contig119.1213.1 ID=prot_E-siliculosus-1a_F_contig119.1213.1|Name=mRNA_E-siliculosus-1a_F_contig119.1213.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=471bp MKDLTATEKEEAAQLLVSMLAAAPPLANELGELLDALDEGETVFVDGVKDback to top mRNA from alignment at E-siliculosus-1a_F_contig119:27940..33951+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-siliculosus-1a_F_contig119.1213.1 ID=mRNA_E-siliculosus-1a_F_contig119.1213.1|Name=mRNA_E-siliculosus-1a_F_contig119.1213.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=6012bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig119:27940..33951+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top Coding sequence (CDS) from alignment at E-siliculosus-1a_F_contig119:27940..33951+ >mRNA_E-siliculosus-1a_F_contig119.1213.1 ID=mRNA_E-siliculosus-1a_F_contig119.1213.1|Name=mRNA_E-siliculosus-1a_F_contig119.1213.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=2826bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig119:27940..33951+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top |