mRNA_E-siliculosus-1a_F_contig119.1211.1 (mRNA) Ectocarpus siliculosus Ec863f_EcPH12_90f female
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Overview
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig119.1211.1 vs. uniprot
Match: D7FYT0_ECTSI (Tub domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FYT0_ECTSI) HSP 1 Score: 1026 bits (2653), Expect = 0.000e+0 Identity = 538/562 (95.73%), Postives = 543/562 (96.62%), Query Frame = 1
Query: 892 MPRSGILEDSDSRSRTQECRGSPERPKSNTGESRRGXXXXXXXXXXAEQDDSEAEGYGWSGNKYSWDSADVDSTGSSSXXXXSDQQALTRLNPNGGDGKHRPNLQSLGTCTDSNKDEDSAKHTASGDNNTAAAAPEKLFRSP-DRTRGKLDDSGAWGRDREQDDAIQKMAGSSGSGHGPTQPSMNSDVKSLPQTTVNRAEVAVGKPIRGARWGESIGVRSAVFDSSTIPTKRVDLKRFVSGPLNSGPGTVLRCFIERDRSGTHKFSPVFSMYADLGDGSGRMLLAARKLLASKTAYYTICTRQEDLFKDNGKRGGNSFLAKLRASSVAHTEYALYDRGDNPAVAASETSLDSGAEAKPKSMRNPIDLARSKTLRNQERHGQGEVRRELGVIIYNFDKKEQRTGKRRMEVAIPQLEQEGDSWKPVSWQPSDTKESMINNFGRIRYQGAQNFLQDDRLLIYHQRESRYDPLSSCLVDYRGRATAPSVKNFQLLKSPPEDNVKRARYFSEGAGKNDVESDDIPRPVFLQMGKVGKDCFNVDLEWPLSVLQGFAICLSRFDAQAQF 2574
MPR GILEDSDSRSRTQEC GSPE+PKSNTGESRRGXXXXXXXXXXAEQDDSEAEGYGWSGNKYSWDSADVDSTGSSS DQQ LT+LNPNGGDGK RP LQ LGTCTDSN+DED A HT SGDNNTAAAAPEKLFRSP DRTRGKLDDSGAWG DREQD AIQKMAGSSGSGHG TQPSMNSDVKSLPQTTVNRAEVAVGKPIRGARWGESIGVRSAVFDSSTIPTKRVDLKRFVSGPLNSGPGTVLRCFIERDRSGTHKFSPVFSMYADLGDGSGRMLLAARKLLASKTAYYTICTRQEDLFKDNGKRGGNSFLAKLRASSVAHTEYALYDRGDNPAVAASETSLDSGAEAKPKSMRNPIDLARSKTLRNQERHGQGEVRRELGVIIYNFDKKEQRTGKRRMEVAIPQLEQEGDSWKPVSWQPSDTKESMINNFGR+RYQGAQNFLQDDRLLI+HQRESRYDPLSSCLVDYRGRATAPSVKNFQLLKSPPEDNVKRARYFSEG GKNDVESDDIPRPVFLQMGKVGKDCFNVDLEWPLSVLQGFAICLSRFDAQAQF
Sbjct: 1 MPRLGILEDSDSRSRTQECGGSPEKPKSNTGESRRGXXXXXXXXXXAEQDDSEAEGYGWSGNKYSWDSADVDSTGSSS-----DQQELTKLNPNGGDGKQRPKLQPLGTCTDSNEDEDRATHTTSGDNNTAAAAPEKLFRSPPDRTRGKLDDSGAWGSDREQDGAIQKMAGSSGSGHGLTQPSMNSDVKSLPQTTVNRAEVAVGKPIRGARWGESIGVRSAVFDSSTIPTKRVDLKRFVSGPLNSGPGTVLRCFIERDRSGTHKFSPVFSMYADLGDGSGRMLLAARKLLASKTAYYTICTRQEDLFKDNGKRGGNSFLAKLRASSVAHTEYALYDRGDNPAVAASETSLDSGAEAKPKSMRNPIDLARSKTLRNQERHGQGEVRRELGVIIYNFDKKEQRTGKRRMEVAIPQLEQEGDSWKPVSWQPSDTKESMINNFGRLRYQGAQNFLQDDRLLIFHQRESRYDPLSSCLVDYRGRATAPSVKNFQLLKSPPEDNVKRARYFSEGGGKNDVESDDIPRPVFLQMGKVGKDCFNVDLEWPLSVLQGFAICLSRFDAQAQF 557
BLAST of mRNA_E-siliculosus-1a_F_contig119.1211.1 vs. uniprot
Match: A0A6V1N906_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1N906_HETAK) HSP 1 Score: 299 bits (766), Expect = 1.470e-90 Identity = 162/351 (46.15%), Postives = 221/351 (62.96%), Query Frame = 1
Query: 1552 VFDSSTIPTKRVDLKRFVSGPLNSGPGTVLRCFIERDRSGTHKFSPVFSMYADLGDGSGRMLLAARKLLASKTAYYTICTRQEDLFKDNGKRGGNSFLAKLRASSVAHTEYALYDRGDNPAVAASETSLDSGAEAKPKSMRNPIDLARSKTLRNQERHGQGEVRRELGVIIYNFDKKEQRTGKRRMEVAIPQLEQ-------EGDSWKPVSWQPSDTKESMINNFGRIRYQGAQNFLQDDRLLIYHQRESRYDPLSSCLVDYRGRATAPSVKNFQLLKSPPEDNVKRARYFS---EGAGKNDVESDDIPRPVFLQMGKVGKDCFNVDLEWPLSVLQGFAICLSRFDAQAQF 2574
+FD IP +L+ FV+GP GPGTV+ CFI+RDRSGT K +PV+++Y+D DGSGR+LL+ARKL SKT YY I T++EDL++ R + +L KLR ++ TEY LYD G+NP+ +ET +S E + L ++ G+ R EL V+ Y +KK G RRMEV +P+L+ G W +W+P ++ N F R+R +G QN + DRLL+ H+RESRYDPLSSCLVD++GRA SVKN+QL++S P D + ++FS EGAG+ D E + RPV LQMGK GKDCFN+D +WPL++LQ F ICLSRFD + +
Sbjct: 14 LFDYRDIPFVFRELQEFVTGPPPGGPGTVVHCFIQRDRSGTKKMAPVYTLYSDHEDGSGRLLLSARKLFKSKTPYYVISTQREDLYRGRQDRS-HHYLGKLRGNTT-QTEYVLYDSGENPSARRNETDSESDGEGR--------RADHGAGLGPRQNSMAGDNREELIVVHYVPEKKTD--GLRRMEVGLPRLQYYADPHHPNGGQWVAENWRPQREANTLANKFARVRQEGGQNVVASDRLLVAHKRESRYDPLSSCLVDFKGRARQASVKNYQLVRSWPTDRNMQRQFFSPGGEGAGETDDE--EAARPVLLQMGKFGKDCFNMDYQWPLTMLQAFGICLSRFDTKLYY 350
BLAST of mRNA_E-siliculosus-1a_F_contig119.1211.1 vs. uniprot
Match: A0A836C912_9STRA (Tubby C-terminal-like domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C912_9STRA) HSP 1 Score: 280 bits (715), Expect = 5.170e-78 Identity = 180/465 (38.71%), Postives = 239/465 (51.40%), Query Frame = 1
Query: 1462 PQTTVNRAEVAVG-KPIRGARWGESIGVRSAVFDSSTIPTKRVD---LKRFVSGPLNSGPGTVLRCFIERDRSG--------------THKFSPVFSMYADLGDGSGRMLLAARKLLASKTAYYTICTRQEDLFKDNGKRGGNSFLAKLRASSVAHTEYALYDRGDNPAVAASETSLDSGAEAKPKSMRNPIDLARSKTLR----------------------NQERHGQGE------VRRELGVIIYNFDKKEQRTGK------RRMEVAIPQLEQE-------------------GDSWKPVS--WQPSDTKESMINNFGRIRYQGAQNFLQDDRLLIYHQRESRYDPLSSCLVDYRGRATAPSVKNFQLLKSPPEDNVKRARYF---------------------SEGAGKNDVESDDIPRPVFLQMGKVGKDCFNVDLEWPLSVLQGFAICLSRFDAQAQF 2574
P++ E A KPIRGAR GE+I R+ V D + I + L+ + PL + G VL+CFIER R+ T +P++S+Y ++ DG+ R+L+AARK+L SKT +Y I TR++DLF KR +++L KLRA +Y LYD GDNP A T A + +M N DL R R + RH Q +RREL V+ Y FDK+ Q GK RRMEVA+PQ+ Q G W+ W+P + +SM F +R +G QNFL DR+L+ HQRESRYDPLSSCLVD++GRA+ SV+NFQL+ S P N RAR +EGAG VE+D + V LQ+GK+ +C+N+DL+ PLS+LQ FAICLSRFD AQF
Sbjct: 367 PESDSRNGETAKAQKPIRGARPGEAILTRAEVLDPTVILPNGMSNQQLRAILCRPLKTSSGQVLQCFIERSRASMGTTSAFMLPIAMPTLSLTPIYSLYVEMPDGTVRLLMAARKVLKSKTPHYIISTRRDDLFVSRDKRSPDTYLGKLRAGEGDTADYTLYDAGDNPRTALGSTW---SAGERLNNMNNTGDLCRDDEHRMSPAGSAAQESCGIHTGSEHSLDSSRHRQTSGASIQGIRRELCVVHYAFDKRAQIAGKAKADFCRRMEVAVPQVRQRVIHQPTHQQSSEASATSEVGQGWEDDMSVWRPVEVADSMAAQFRHVRRKGGQNFLVSDRMLVLHQRESRYDPLSSCLVDFKGRASTASVRNFQLIMSTPTHNATRARLSLAAVETATPGSPNAQPALGQAAEGAGAAVVEADSVCNAVVLQLGKISANCYNMDLQAPLSILQAFAICLSRFDTSAQF 828
BLAST of mRNA_E-siliculosus-1a_F_contig119.1211.1 vs. uniprot
Match: F0YIF3_AURAN (Tub domain-containing protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YIF3_AURAN) HSP 1 Score: 249 bits (637), Expect = 6.410e-67 Identity = 148/380 (38.95%), Postives = 213/380 (56.05%), Query Frame = 1
Query: 1489 VAVGKPIRGARWGESIGVRSAVFDSSTIPTKRVDLKRFVSGPLNSGPGTVLRCFIERDRSGTHKFSPVFSMYADLGDGSGRMLLAARKLLASKTAYYTICTRQEDLFKDNGKRGGNSFLAKLRASSVAHTEYALYDRGDNPAVAASETSLDSGAEAKPKSMRNPIDLARSKTLRNQERHGQGEVRRELGVIIYNFDKKEQRTGKRRMEVAIPQLEQEGDSWKP--------------------VSWQPSDTKESMINNFGRIRYQGAQNFLQDDRLLIYHQRESRYDPLSSCLVDYRGRATAPSVKNFQLLKSPP-EDNVKRARYFSEGAGKNDVESDDIPRPVFLQMGKVGKDCFNVDLEWPLSVLQGFAICLSRFDAQ 2565
VA G+P G ++ +VF++ +IP L FV P SG G V+RCFIER+RSG H P++ +YAD DG+GR+L+AARKL + T++Y T DL+K G R + +L KLRA+ A +EY L+ GD P A+ GA A+P P G+ R E+ + ++ K+ T RRMEVA+PQ W+P S++P+ ++S+ + + QGAQN L DR+ + H RES+YDPLSSCLVD++ RA SVKNFQL+KS P ED++K+ + G G + + D +P+ LQMGKVGK+CFN+D ++P+S+LQ FA C++RFD +
Sbjct: 529 VADGRPTTGRD-----AMKPSVFEARSIPFVLRKLHAFVLAPAPSGGGVVVRCFIERNRSGRHALFPLYKLYADHEDGTGRLLVAARKLPGNGTSHYAFSTSPADLYKARGNRSRH-YLGKLRANG-ATSEYTLFSAGDKPPAGAA------GAGARPPRGDPP-----------------GDARCEMAAVAFS-SKRSAPTNPRRMEVAVPQTR-----WRPRNADDGPRHDDDLDDGVVAVASFRPARDQDSLCHTLNLAQGQGAQNVLHADRIAVLHMRESKYDPLSSCLVDFKARANMASVKNFQLVKSSPVEDHMKKEYFAPGGEGARENPNPDAAQPIILQMGKVGKNCFNMDYQFPMSMLQAFATCIARFDTR 872
BLAST of mRNA_E-siliculosus-1a_F_contig119.1211.1 vs. uniprot
Match: A0A6G0WMA0_9STRA (Tub domain-containing protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WMA0_9STRA) HSP 1 Score: 222 bits (566), Expect = 2.380e-58 Identity = 142/369 (38.48%), Postives = 211/369 (57.18%), Query Frame = 1
Query: 1501 KPIRGAR---WGESIGVRSAVFDSSTIPTKRVDLKRFVSGPLNSGPGTVLRCFIERDRSGTHKFSPVFSMYADLGDGSGRMLLAARKLLASK-TAYYTICTRQEDLFKDNGKRGGNSFLAKLRASSVAHTEYALYDRGDNPAVAASETSLDSGAEAKPKSMRNPIDLARSKTLRNQERHGQGEVRRELGVIIYNFDKKEQRTGKRRMEVAIPQLEQEG---DSWKPVS---WQPSDTKESMINNFGRIRYQGAQNFLQDDRLLIYHQRESRYDPLSSCLVDYRGRATAPSVKNFQLLKSPPEDNVKRARYFSEGAGK---NDVESDDIPRP-VFLQMGKVGKDCFNVDLEWPLSVLQGFAICLSRFDAQ 2565
KP R R GE +F+ +P L FV+ PL+ G G ++RCFIER+RSG +K SP+++M ++ SGR +L ARK S+ ++++ ++DLF +R F+ KLR S V EY LYD+GDNP +DS E ID + +R Q +R EL VIIY+ KK+ +R+MEV +P + ++ D K +S W+P +++ F + QG QN L+ D+L+ H+RES+YDPLSSC+VD+R RAT SVKNFQL+ S P D K + + + +D + +P+ + LQMG+VG++CFN+D ++PLS+LQ FAIC+SRFD++
Sbjct: 364 KPKRSKRNKDKGEEKKKSFELFNPKRVPYVPNHLLDFVTKPLDVGRGHIVRCFIERNRSGQNKISPLYTMLIEVNSSSGRPILYARKKPTSRISSHFIFSLNKDDLFLSRSQRS-KQFVGKLR-SDVRKMEYTLYDQGDNP------EDIDSDCE---------ID----EEIRQQ-------IRAELAVIIYHPMKKD---NQRKMEVILPAIIEQPTGEDGVKNLSYLDWRPISRDQALDALFADVAEQGGQNVLEKDKLICLHKRESKYDPLSSCIVDFRSRATCVSVKNFQLVHSQPTDQDKYRQAYIQAHPSFHYDDESTVSVPQEHIMLQMGRVGQNCFNMDFQYPLSMLQAFAICISRFDSK 701
BLAST of mRNA_E-siliculosus-1a_F_contig119.1211.1 vs. uniprot
Match: A0A3F2RH14_9STRA (Tub domain-containing protein n=4 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3F2RH14_9STRA) HSP 1 Score: 212 bits (539), Expect = 1.830e-55 Identity = 131/347 (37.75%), Postives = 192/347 (55.33%), Query Frame = 1
Query: 1540 VRSAVFDSSTIPTKRVDLKRFVSGPLNSGPGTVLRCFIERDRSGTHKFSPVFSMYADLGDGSGRMLLAARKLLASK-TAYYTICTRQEDLFKDNGKRGGNSFLAKLRASSVAHTEYALYDRGDNPAVAASETSLDSGAEAKPKSMRNPIDLARSKTLRNQERHGQGEVRRELGVIIYNFDKKEQRTGKRRMEVAIPQLEQEGDSWKPVSWQPSDTKESMINNFGRIRYQGAQNFLQDDRLLIYHQRESRYDPLSSCLVDYRGRATAPSVKNFQLLKSPPEDNVKRARY---FSEGAGKNDVESDDIPRP-VFLQMGKVGKDCFNVDLEWPLSVLQGFAICLSRFDAQ 2565
+++ F+ ++P L FV PL G G +++CFIER+ SG +K +P++++ ++ SGR ++ ARK S+ T++Y I ++DLF R + ++ KLR SS + EY LYD+GDNP LDS E DL +S +R EL +I Y+ KK R+MEV IP + G + + W+P + M + I G QN + + +H+RE++YDPLSSC+VD+R RAT SVKNFQL+ S P R +Y F E + D + +P+ V LQ+GKVGKDCFN+D ++PLS+LQ FAI LSRFD +
Sbjct: 284 IQAQFFNPKSVPYIPDHLLEFVKRPLECGRGQIVKCFIERNDSGQNKLAPIYTLLLEVNSSSGRPIMYARKKATSRITSHYVISMNRDDLFLSRMMRS-HQYIGKLR-SSTSMMEYCLYDQGDNP------EDLDSDCEV-------DDDLRQS-------------IRAELAMIRYHNTKKPY---PRKMEVVIPTIVDNGAGY--LEWRPISRDQMMEEHIRNITAAGGQNVMDASNFVFFHKRETKYDPLSSCIVDFRSRATCVSVKNFQLVHSEPTSGQMRDQYRKAFPEYVYE-DQGTVSLPQEHVLLQLGKVGKDCFNMDFQYPLSMLQAFAISLSRFDTK 596
BLAST of mRNA_E-siliculosus-1a_F_contig119.1211.1 vs. uniprot
Match: A0A7S1TRJ5_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TRJ5_9STRA) HSP 1 Score: 213 bits (541), Expect = 2.050e-55 Identity = 137/366 (37.43%), Postives = 189/366 (51.64%), Query Frame = 1
Query: 1510 RGARWGESIGVRSA-------VFDSSTIPTKRVDLKRFVSGPLNSGPGTVLRCFIERDRSGTHKFSPVFSMYADLGDGSGRMLLAARKLLASKTAYYTICTRQEDLFKDNGKRGGNSFLAKLRASSVAHTEYALYDRGDNPAVAASETSLDSGAEAKPKSMRNPIDLARSKTLRNQERHGQGEVRRELGVIIYNFD-------KKEQRTGKRRMEVAIPQLEQEGDSWKPVSWQP--SDTKESMINNFGRIRYQGAQNFLQDDRLLIYHQRESRYDPLSSCLVDYRGRATAPSVKNFQLLKSPPEDNVKRARYFSEGAGKNDVESDDIPRPVFLQMGKVGKDCFNVDLEWPLSVLQGFAICLSRFD 2559
R RWG + + +A VFD IP +L F+ P GPG +RCFIER++ G + +P++++YAD DG+GR++ ARK+ + A+Y I T++EDL + R N FL KLR S Y LYD G++P ET L P D+A N+ G +RREL + Y +K R ME +P++E D + W+P D +++ R GAQN L + + H R SR D +S +Y GRA +PS KNFQ++KS P D+ K YF+ DD +PV LQ+G+VGKDCFNVD +WPLS+LQ FAI LSRFD
Sbjct: 295 RVKRWGAEVPLAAAGAADDVVVFDPLQIPLLLAELHAFICNPPEDGPGVAVRCFIERNK-GVARANPLYTLYADHEDGTGRVMAYARKVTSLNGAHYVISTKEEDLRERRHNRS-NQFLGKLRGSEGGDL-YTLYDWGESP----DETLL------------RPADMA---VEANRIARG---MRRELLSVRYTASAGADPDARKYLAQLDRHMEAIVPRVELTADGNRVTDWRPWRPDRGDTLAAMLDATRRAGAQNLLHAEHTFVLHARASRLDAAASWQREYGGRALSPSKKNFQMVKSVPADHYKHDDYFALPDSAAAERGDDSLKPVLLQLGRVGKDCFNVDYQWPLSMLQAFAISLSRFD 635
BLAST of mRNA_E-siliculosus-1a_F_contig119.1211.1 vs. uniprot
Match: V9FF81_PHYPR (Tub domain-containing protein n=10 Tax=Phytophthora TaxID=4783 RepID=V9FF81_PHYPR) HSP 1 Score: 216 bits (549), Expect = 2.110e-55 Identity = 130/346 (37.57%), Postives = 197/346 (56.94%), Query Frame = 1
Query: 1540 VRSAVFDSSTIPTKRVDLKRFVSGPLNSGPGTVLRCFIERDRSGTHKFSPVFSMYADLGDGSGRMLLAARKLLASK-TAYYTICTRQEDLFKDNGKRGGNSFLAKLRASSVAHTEYALYDRGDNPAVAASETSLDSGAEAKPKSMRNPIDLARSKTLRNQERHGQGEVRRELGVIIYNFDKKEQRTGKRRMEVAIPQLEQEGDSWKPVSWQPSDTKESMINNFGRIRYQGAQNFLQDDRLLIYHQRESRYDPLSSCLVDYRGRATAPSVKNFQLLKSPPEDNVKRARYFSEGAG--KNDVESDDIPRP-VFLQMGKVGKDCFNVDLEWPLSVLQGFAICLSRFDAQ 2565
+++ F+ ++P L FV PL G G +++CFIER+ SG +K +P++++ ++ SGR ++ ARK S+ T++Y I ++DLF R + ++ KLR SS + EY+LYD+GDNP LDS E ID ++ R +R EL +I Y++ KK R+MEV IP +++ G S+ + W+P + M + I G QN + + + H+RE++YDPLSSC+VD+R RAT SVKNFQL+ S P + R +Y +D + +P+ V LQ+GKVGKDCFN+D ++PLS+LQ FAI LSRFD +
Sbjct: 501 IQAQFFNPKSVPYIPDHLLEFVKRPLECGRGQIVKCFIERNDSGPNKLAPIYTLLLEVNSSSGRPIMYARKRATSRITSHYVISMNKDDLFLSRMMRS-HQYIGKLR-SSTSMMEYSLYDQGDNP------EDLDSDCE---------ID--------DEVRQS---IRAELAMIRYHYSKKPY---PRKMEVVIPAIQENGQSY--LEWRPLSRDQMMEEHVRNIASAGGQNVMDANNFVFLHKRETKYDPLSSCIVDFRSRATCVSVKNFQLVHSEPTNEQMREQYRKTYPDFVYDDQGTVSLPQEYVLLQLGKVGKDCFNMDFQYPLSMLQAFAISLSRFDTK 813
BLAST of mRNA_E-siliculosus-1a_F_contig119.1211.1 vs. uniprot
Match: A0A329RQ10_9STRA (Tub domain-containing protein n=1 Tax=Phytophthora cactorum TaxID=29920 RepID=A0A329RQ10_9STRA) HSP 1 Score: 216 bits (550), Expect = 2.470e-55 Identity = 126/346 (36.42%), Postives = 193/346 (55.78%), Query Frame = 1
Query: 1540 VRSAVFDSSTIPTKRVDLKRFVSGPLNSGPGTVLRCFIERDRSGTHKFSPVFSMYADLGDGSGRMLLAARKLLASK-TAYYTICTRQEDLFKDNGKRGGNSFLAKLRASSVAHTEYALYDRGDNPAVAASETSLDSGAEAKPKSMRNPIDLARSKTLRNQERHGQGEVRRELGVIIYNFDKKEQRTGKRRMEVAIPQLEQEGDSWKPVSWQPSDTKESMINNFGRIRYQGAQNFLQDDRLLIYHQRESRYDPLSSCLVDYRGRATAPSVKNFQLLKSPPEDNVKRARYFSEGAG--KNDVESDDIPRP-VFLQMGKVGKDCFNVDLEWPLSVLQGFAICLSRFDAQ 2565
+++ F+ ++P + FV PL G G +++CFIER+ SG +K +P++++ ++ SGR ++ ARK+ S+ T++Y I ++DLF R + ++ KLR SS + EY+LYD+GDNP LDS E + + +R EL VI Y++ KK R+MEV IP +++ G + + W+P + M + I G QN + + H+RE++YDPLSSC+VD+R RAT SVKNFQL+ S P + R +Y +D + +P+ V LQ+GKVGKDCFN+D ++PLS+LQ FAI LSRFD +
Sbjct: 545 IQAQFFNPKSVPYIPDHMLEFVKRPLECGRGQIVKCFIERNDSGPNKLAPIYTLLLEVNSSSGRPIMYARKMATSRITSHYVISMNKDDLFLSRMMRS-HQYIGKLR-SSTSMMEYSLYDQGDNP------EDLDSDCEV--------------------DEEVRQSIRAELAVIRYHYSKKPY---PRKMEVVIPAIQENGQGY--LEWRPLSRDQMMDEHVRNIASAGGQNVMDASNFVFLHKRETKYDPLSSCIVDFRSRATCVSVKNFQLVHSEPTNEQMREQYRKAYPDFVYDDQGTVSLPQEYVLLQLGKVGKDCFNMDFQYPLSMLQAFAISLSRFDTK 857
BLAST of mRNA_E-siliculosus-1a_F_contig119.1211.1 vs. uniprot
Match: A0A833T5U8_PHYIN (Tub family n=1 Tax=Phytophthora infestans TaxID=4787 RepID=A0A833T5U8_PHYIN) HSP 1 Score: 216 bits (549), Expect = 2.880e-55 Identity = 131/347 (37.75%), Postives = 194/347 (55.91%), Query Frame = 1
Query: 1540 VRSAVFDSSTIPTKRVDLKRFVSGPLNSGPGTVLRCFIERDRSGTHKFSPVFSMYADLGDGSGRMLLAARKLLASK-TAYYTICTRQEDLFKDNGKRGGNSFLAKLRASSVAHTEYALYDRGDNPAVAASETSLDSGAEAKPKSMRNPIDLARSKTLRNQERHGQGEVRRELGVIIYNFDKKEQRTGKRRMEVAIPQLEQEGDSWKPVSWQPSDTKESMINNFGRIRYQGAQNFLQDDRLLIYHQRESRYDPLSSCLVDYRGRATAPSVKNFQLLKSPPEDNVKRARY---FSEGAGKNDVESDDIPRP-VFLQMGKVGKDCFNVDLEWPLSVLQGFAICLSRFDAQ 2565
+++ F+ ++P L FV PL G G +++CFIER+ SG +K +P++++ ++ SGR ++ ARK S+ T++Y I ++DLF R + ++ KLR SS + EY LYD+GDNP LDS E D R +R EL VI Y++ KK R+MEV IP +++ G S+ + W+P + M + I G QN + + H+RE++YDPLSSC+VD+R RAT SVKNFQL+ S P + R +Y F + +D + +P+ V LQ+GKVGKDCFN+D ++PLS+LQ FAI LSRFD +
Sbjct: 530 IQAQFFNPKSVPYIPDHLLEFVKRPLECGRGQIVKCFIERNDSGPNKLAPIYTLLLEVNSSSGRPIMYARKKATSRITSHYVISMNKDDLFLSRMMRS-HQYIGKLR-SSTSMMEYCLYDQGDNP------EDLDSDCEVD--------DEVRQS------------IRAELAVIRYHYSKKPY---PRKMEVVIPAVQENGQSY--LEWRPLSRDQMMDEHVRNIAAAGGQNVMDASNFVFLHKRETKYDPLSSCIVDFRSRATCVSVKNFQLVHSEPTNGQMREQYRKTFPDFV-YDDQGTVSLPQEYVLLQLGKVGKDCFNMDFQYPLSMLQAFAISLSRFDTK 842 The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig119.1211.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-siliculosus-1a_F_contig119.1211.1 >prot_E-siliculosus-1a_F_contig119.1211.1 ID=prot_E-siliculosus-1a_F_contig119.1211.1|Name=mRNA_E-siliculosus-1a_F_contig119.1211.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=859bp MQSPSRCVPPPPSDPPPPNISRSGRVPPPRGAPPGGARRARQAVRRPLHPback to top mRNA from alignment at E-siliculosus-1a_F_contig119:18180..22900+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-siliculosus-1a_F_contig119.1211.1 ID=mRNA_E-siliculosus-1a_F_contig119.1211.1|Name=mRNA_E-siliculosus-1a_F_contig119.1211.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=4721bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig119:18180..22900+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top Coding sequence (CDS) from alignment at E-siliculosus-1a_F_contig119:18180..22900+ >mRNA_E-siliculosus-1a_F_contig119.1211.1 ID=mRNA_E-siliculosus-1a_F_contig119.1211.1|Name=mRNA_E-siliculosus-1a_F_contig119.1211.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=5154bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig119:18180..22900+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top |