mRNA_E-siliculosus-1a_F_contig119.1207.1 (mRNA) Ectocarpus siliculosus Ec863f_EcPH12_90f female
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Overview
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig119.1207.1 vs. uniprot
Match: D7FYS6_ECTSI (Elongation of fatty acids protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FYS6_ECTSI) HSP 1 Score: 444 bits (1143), Expect = 8.600e-155 Identity = 215/215 (100.00%), Postives = 215/215 (100.00%), Query Frame = 2
Query: 224 MVTVGPKVMADMSPIDSYPVRFVYNVVQIILCSYMCVEAFMIAYRNGYPVLPCAPFDAENPPAANLLWLFYVSKVLDFMDTIFIVLKKSWRQLSFLHVYHHCTIFLFYWLNVNAGYDGDVYLTIVLNGFIHTVMYTYYFVSMHTKDIWWKKYLTLMQMIQFVCMTTQALYLLTTGCTSYPPRIVVVYAGYILSLLFLFAQFYVNSYTKKPTAKNA 868
MVTVGPKVMADMSPIDSYPVRFVYNVVQIILCSYMCVEAFMIAYRNGYPVLPCAPFDAENPPAANLLWLFYVSKVLDFMDTIFIVLKKSWRQLSFLHVYHHCTIFLFYWLNVNAGYDGDVYLTIVLNGFIHTVMYTYYFVSMHTKDIWWKKYLTLMQMIQFVCMTTQALYLLTTGCTSYPPRIVVVYAGYILSLLFLFAQFYVNSYTKKPTAKNA
Sbjct: 1 MVTVGPKVMADMSPIDSYPVRFVYNVVQIILCSYMCVEAFMIAYRNGYPVLPCAPFDAENPPAANLLWLFYVSKVLDFMDTIFIVLKKSWRQLSFLHVYHHCTIFLFYWLNVNAGYDGDVYLTIVLNGFIHTVMYTYYFVSMHTKDIWWKKYLTLMQMIQFVCMTTQALYLLTTGCTSYPPRIVVVYAGYILSLLFLFAQFYVNSYTKKPTAKNA 215
BLAST of mRNA_E-siliculosus-1a_F_contig119.1207.1 vs. uniprot
Match: A0A835Z8H5_9STRA (Elongation of fatty acids protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z8H5_9STRA) HSP 1 Score: 349 bits (895), Expect = 2.930e-116 Identity = 161/261 (61.69%), Postives = 197/261 (75.48%), Query Frame = 2
Query: 86 TYKELANGVGDAVLNWARNGQTSDATKGWFLTDFATALAIVGAYLVMVTVGPKVMADMSPIDS--YPVRFVYNVVQIILCSYMCVEAFMIAYRNGYPVLPCAPFDAENPPAANLLWLFYVSKVLDFMDTIFIVLKKSWRQLSFLHVYHHCTIFLFYWLNVNAGYDGDVYLTIVLNGFIHTVMYTYYFVSMHTKDIWWKKYLTLMQMIQFVCMTTQALYLLTTGCTSYPPRIVVVYAGYILSLLFLFAQFYVNSYTKKPTAK 862
T + N VG ++ WA N + + T W + DF +A+ +V AYL + VG VM + P+D+ YP RF+YN+VQI+LCSYMC+EA +IA+RN Y +LPC PF+ +NPP N+LWLFY+SK+LDF DT+FIVL+K W+QLSFLHVYHH TIFLFYWLN+N GYDGD+YLTIVLNGFIHTVMYTYYFVSMHT IWWK LT MQM+QFV M +QALYLLTTGCT+YPPR+ Y YI SLL LF F++ SY K K
Sbjct: 5 TLESSINSVGTRIIEWATNDRKAGPTADWPMADFYSAVMVVAAYLGFIFVGSFVMKFVQPLDAPTYPFRFIYNIVQIMLCSYMCLEAGIIAHRNNYGILPCVPFNVQNPPVGNVLWLFYISKILDFADTVFIVLRKKWKQLSFLHVYHHTTIFLFYWLNINVGYDGDIYLTIVLNGFIHTVMYTYYFVSMHTDKIWWKSSLTAMQMVQFVTMISQALYLLTTGCTTYPPRVTQAYCLYIFSLLILFGNFFIKSYMPKQGGK 265
BLAST of mRNA_E-siliculosus-1a_F_contig119.1207.1 vs. uniprot
Match: A0A7S4JGP6_9STRA (Elongation of fatty acids protein n=2 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4JGP6_9STRA) HSP 1 Score: 341 bits (874), Expect = 4.590e-113 Identity = 170/273 (62.27%), Postives = 200/273 (73.26%), Query Frame = 2
Query: 80 METYKELANGVGDAVLNWAR-NGQTSDATKGWFLTDFATALAIVGAYLVMVTVGPKVM-ADMSPIDSYPVRFVYNVVQIILCSYMCVEAFMIAYRNGYPVLPCAPFDAENPPAANLLWLFYVSKVLDFMDTIFIVLKKSWRQLSFLHVYHHCTIFLFYWLNVNAGYDGDVYLTIVLNGFIHTVMYTYYFVSMHTKD--------IWWKKYLTLMQMIQFVCMTTQALYLLTTGCTSYPPRIVVVYAGYILSLLFLFAQFYVNSYTKKPTAKNA 868
ME Y + +G+++LNWA + Q T+GWFLTDF TA +I AY+ V +G VM + ++ +D YP++F YNV QI+LC+YM +E F++AYRNGY LPC D +NPP ANLLWLFYVSKV DF DTIFIVL K WRQLSFLHVYHH TIFLFYWLN + +DGD+YLTIVLNGFIHTVMYTYYF+ MHTKD IWWK LTLMQ+IQF+ M +QA YLL TGC R+V VY YILSL FLFAQFYV SYTKKP K A
Sbjct: 1 MEAYLNTMDSIGESILNWADPDNQFRGYTEGWFLTDFRTAGSIALAYVAFVVIGSAVMKSGVAAMDPYPIKFFYNVSQIMLCAYMTIEGFLLAYRNGYTCLPCIDIDTKNPPLANLLWLFYVSKVWDFWDTIFIVLGKKWRQLSFLHVYHHTTIFLFYWLNAHVNFDGDIYLTIVLNGFIHTVMYTYYFICMHTKDPKTGKSLPIWWKSSLTLMQLIQFITMMSQATYLLVTGCQKTGLRVVSVYFVYILSLFFLFAQFYVASYTKKPKKKAA 273
BLAST of mRNA_E-siliculosus-1a_F_contig119.1207.1 vs. uniprot
Match: A0A6U1Q8V8_9STRA (Elongation of fatty acids protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A6U1Q8V8_9STRA) HSP 1 Score: 340 bits (872), Expect = 1.300e-112 Identity = 162/257 (63.04%), Postives = 196/257 (76.26%), Query Frame = 2
Query: 86 TYKELANGVGDAVLNWARNGQTSDATKGWFLTDFATALAIVGAYLVMVTVGPKV--MADMSPIDSYPVRFVYNVVQIILCSYMCVEAFMIAYRNGYPVLPCAPFDAENPPAANLLWLFYVSKVLDFMDTIFIVLKKSWRQLSFLHVYHHCTIFLFYWLNVNAGYDGDVYLTIVLNGFIHTVMYTYYFVSMHTKDIWWKKYLTLMQMIQFVCMTTQALYLLTTGCTSYPPRIVVVYAGYILSLLFLFAQFYVNSYTKK 850
T+ + A +L W G+ + TKGW LTD +AL I GAYL+ V VG + + + I YPV+F+YN+VQ++LCSYM +EA M+A+R GY LPC PF+A+NPP A +L++FY+SK+LDFMDT FI++ K W+QLSFLHVYHH +IFLFYWLN+N GYDGDVYLTIVLNGFIHTVMYTYYFVS+HTKDIWWK LT+ QMIQFV M QA YLL TGC SYPPRIV+ Y YILSLL LFA F+V SY KK
Sbjct: 14 TFSQWAGDYEQKILAWVSEGRVHEYTKGWPLTDLESALTIAGAYLLFVLVGSMLFKVEAVPAIKLYPVQFLYNIVQVMLCSYMAIEAGMVAFRQGYTCLPCEPFNAKNPPVAEVLYIFYLSKILDFMDTFFIIIGKKWKQLSFLHVYHHTSIFLFYWLNINVGYDGDVYLTIVLNGFIHTVMYTYYFVSLHTKDIWWKSSLTMCQMIQFVTMNAQAGYLLLTGCKSYPPRIVLSYLVYILSLLVLFANFFVQSYLKK 270
BLAST of mRNA_E-siliculosus-1a_F_contig119.1207.1 vs. uniprot
Match: A0A7R9WGN6_9STRA (Elongation of fatty acids protein n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9WGN6_9STRA) HSP 1 Score: 336 bits (861), Expect = 4.120e-111 Identity = 164/266 (61.65%), Postives = 198/266 (74.44%), Query Frame = 2
Query: 80 METYKELANGVGDAVLNWAR-NGQTSDATKGWFLTDFATALAIVGAYLVMVTVGPKVM-ADMSPIDSYPVRFVYNVVQIILCSYMCVEAFMIAYRNGYPVLPCAPFDAENPPAANLLWLFYVSKVLDFMDTIFIVLKKSWRQLSFLHVYHHCTIFLFYWLNVNAGYDGDVYLTIVLNGFIHTVMYTYYFVSMHTKD--------IWWKKYLTLMQMIQFVCMTTQALYLLTTGCTSYPPRIVVVYAGYILSLLFLFAQFYVNSYTK 847
M Y E + +G+++L+WA G+ T+GWFLTDF++A + AY+ V +G VM + ++ +D YP++F+YNV QI+LC+YM +EAF++AYRNGY LPC D ENPP ANLLWLFY+SKV DF DT+FIV+ K WRQLSFLHVYHH TIFLFYWLN + YDGD+YLTI+LNGFIHTVMYTYYF+ MHTKD IWWK YLTLMQMIQFV M +QA YLL T C R+V VY YILSL FLFAQFYV SYTK
Sbjct: 1 MSAYVETMDSIGESILSWADPEGKFRGHTEGWFLTDFSSAGTVALAYVAFVVIGSAVMKSGVAAMDPYPIKFIYNVSQIMLCAYMTIEAFLLAYRNGYTCLPCNNVDTENPPLANLLWLFYISKVWDFWDTVFIVIGKKWRQLSFLHVYHHTTIFLFYWLNSHVNYDGDIYLTILLNGFIHTVMYTYYFICMHTKDPKTGKSLPIWWKSYLTLMQMIQFVTMMSQATYLLGTQCEKTSLRVVFVYLVYILSLFFLFAQFYVQSYTK 266
BLAST of mRNA_E-siliculosus-1a_F_contig119.1207.1 vs. uniprot
Match: L1IAX0_GUITC (Elongation of fatty acids protein n=2 Tax=Guillardia theta TaxID=55529 RepID=L1IAX0_GUITC) HSP 1 Score: 333 bits (855), Expect = 3.830e-110 Identity = 162/274 (59.12%), Postives = 201/274 (73.36%), Query Frame = 2
Query: 80 METYKELANGVGDAVLNWARNGQTSD---------ATKGWFLTDFATALAIVGAYLVMVTVGPKVMADMSPID--SYPVRFVYNVVQIILCSYMCVEAFMIAYRNGYPVLPCAPFDAENPPAANLLWLFYVSKVLDFMDTIFIVLKKSWRQLSFLHVYHHCTIFLFYWLNVNAGYDGDVYLTIVLNGFIHTVMYTYYFVSMHTKDIWWKKYLTLMQMIQFVCMTTQALYLLTTGCTSYPPRIVVVYAGYILSLLFLFAQFYVNSYTKKPTAKNA 868
ME YK A+ VG +LN+A N + D T+GWFLTDFA+A AI Y +V VG VM +D +YP+RFVYN++Q++LCSYM +EA ++AYR+ Y ++PC PF ENPP A +LWLFY+SKVLDFMDT FIVL K W QLSFLHVYHH TIF+ YW+NVN GYDGD+YLTIVLNGFIHTVMYTYYFVSMHTKDIWWKKYLT+MQMIQF+ M QA++LL + C ++P ++ +Y YI+SL LF F++ SY P +K A
Sbjct: 1 MEAYKPWADAVGRQLLNFAANTELFDDSGKAIKPLPTQGWFLTDFASAFAISAIYFALVIVGRIVMIPFRSLDKLTYPIRFVYNILQVMLCSYMTLEAGILAYRHNYNLVPCNPFKTENPPIAPVLWLFYISKVLDFMDTFFIVLGKKWEQLSFLHVYHHLTIFMIYWMNVNVGYDGDIYLTIVLNGFIHTVMYTYYFVSMHTKDIWWKKYLTMMQMIQFITMNGQAIWLLQSNCQTFPRKVTQLYLVYIMSLFALFLNFFIRSYVS-PKSKKA 273
BLAST of mRNA_E-siliculosus-1a_F_contig119.1207.1 vs. uniprot
Match: A0A1E7FWF4_9STRA (Elongation of fatty acids protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FWF4_9STRA) HSP 1 Score: 325 bits (832), Expect = 1.010e-106 Identity = 157/272 (57.72%), Postives = 192/272 (70.59%), Query Frame = 2
Query: 80 METYKELANGVGDAVLNWAR-NGQTSDATKGWFLTDFATALAIVGAYLVMVTVGPKVMADMSPIDSYPVRFVYNVVQIILCSYMCVEAFMIAYRNGYPVLPCAPFDAENPPAANLLWLFYVSKVLDFMDTIFIVLKKSWRQLSFLHVYHHCTIFLFYWLNVNAGYDGDVYLTIVLNGFIHTVMYTYYFVSMHTKD--------IWWKKYLTLMQMIQFVCMTTQALYLLTTGCTSYPPRIVVVYAGYILSLLFLFAQFYVNSYTKKPTAKNA 868
M+ YK VGDA++ WA Q + TKGWFLTDF +A +I Y++ V +G +VM + ID YP++F YNV QI+LC+YM +EA ++AYRNGY ++PC ++ ++P NLLWLFYVSKV DF DTIFIVL K WRQLSFLHVYHH TIFLFYWLN N YDGD+YLTI LNGFIHTVMYTYYF+ MHTKD IWWK LTL+Q+ QF+ M +Q LYL+ GC S R+ Y YILSL FLFAQF+V SY + +K A
Sbjct: 1 MDEYKATLESVGDAIIQWADPESQFTGFTKGWFLTDFTSAFSIALVYVLFVIIGSQVMKVLPAIDPYPIKFFYNVSQIMLCAYMTIEACLLAYRNGYTIMPCVGYNRDDPAIGNLLWLFYVSKVWDFWDTIFIVLGKKWRQLSFLHVYHHTTIFLFYWLNANVFYDGDIYLTIALNGFIHTVMYTYYFICMHTKDKKTGKSLPIWWKSSLTLLQLFQFITMMSQGLYLIIFGCESLSIRVTATYVVYILSLFFLFAQFFVASYMQPKKSKTA 272
BLAST of mRNA_E-siliculosus-1a_F_contig119.1207.1 vs. uniprot
Match: A0A7S2UR25_9STRA (Elongation of fatty acids protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2UR25_9STRA) HSP 1 Score: 322 bits (826), Expect = 8.430e-106 Identity = 160/271 (59.04%), Postives = 196/271 (72.32%), Query Frame = 2
Query: 80 METYKELANGVGDAVLNWAR-NGQTSDATKGWFLTDFATALAIVGAYLVMVTVGPKVM-ADMSPIDSYPVRFVYNVVQIILCSYMCVEAFMIAYRNGYPVLPCAPFDAENPPAANLLWLFYVSKVLDFMDTIFIVLKKSWRQLSFLHVYHHCTIFLFYWLNVNAGYDGDVYLTIVLNGFIHTVMYTYYFVSMHTK--------DIWWKKYLTLMQMIQFVCMTTQALYLLTTGCTSYPPRIVVVYAGYILSLLFLFAQFYVNSYTKKPTAK 862
M+TY + VG+++L+WA + + T GWFLTDF +A+ I Y+V V VG +M A + +D YP++FVYNV QI +C+YM VEAF+IAYR GY LPC FD ENPP A+LL+LFY+SKV DF DTIFIV+ K WRQLSFLHVYHH TIFLFYWLN + YDGD+YLTI+LNGFIHTVMYTYYF+ MHTK IWWK LT+MQ+IQFV M +QA YLL +GC R+ +Y YILSL FLFAQFY++SY+K K
Sbjct: 1 MDTYVSTMDAVGESILSWADPDSKFRGYTDGWFLTDFTSAITIAIVYVVFVVVGSAIMKAGVPAMDPYPIKFVYNVSQIFMCAYMTVEAFLIAYRAGYHALPCNNFDTENPPLAHLLYLFYLSKVWDFWDTIFIVIGKKWRQLSFLHVYHHTTIFLFYWLNSHVNYDGDIYLTILLNGFIHTVMYTYYFICMHTKVPETGKSLPIWWKSSLTMMQLIQFVSMMSQATYLLVSGCEENTSRVTALYFVYILSLFFLFAQFYISSYSKPKKRK 271
BLAST of mRNA_E-siliculosus-1a_F_contig119.1207.1 vs. uniprot
Match: A0A1S7C7Q3_9STRA (Elongation of fatty acids protein n=1 Tax=Nannochloropsis oceanica TaxID=145522 RepID=A0A1S7C7Q3_9STRA) HSP 1 Score: 318 bits (814), Expect = 6.100e-104 Identity = 153/268 (57.09%), Postives = 186/268 (69.40%), Query Frame = 2
Query: 89 YKELANGVGDAVLNWA--RNGQTSDATKGWFLTDFATALAIVGAYLVMVTVGPKVMADMSPIDSYPVRFVYNVVQIILCSYMCVEAFMIAYRNGYPVLPCAPFDAENPPAANLLWLFYVSKVLDFMDTIFIVLKKSWRQLSFLHVYHHCTIFLFYWLNVNAGYDGDVYLTIVLNGFIHTVMYTYYFVSMHTKDIWWKKYLTLMQMIQFVCMTTQALYLLTTGCTSYPPRIVVVYAGYILSLLFLFAQFYVNSYT------KKPTAKNA 868
Y++ + A+ WA T+ W L ALAI YL++V VG +M + P+ Y ++F YN+ Q+ LCSYMC+EA + AYRN Y LPC PF+A NPP A LLWLFYVSKV DF DT+FI+L K W QLSFLHVYHH TIFL YWLN+NAGYDGD++LT++LNG IHTVMYTYYF+SMHTKDIWWKKYLTL Q+IQF+ M QA+YLL GC + P+I +Y GYILSLL LF FY SY+ KKP +K A
Sbjct: 9 YQKTCTDLSAAIFKWADPAGAMVKAPTRTWPLAGLDVALAIAAFYLIIVFVGSAMMKNAQPVKLYGLQFFYNISQVALCSYMCIEAAIQAYRNNYTFLPCEPFNATNPPIAPLLWLFYVSKVFDFADTVFIILGKKWNQLSFLHVYHHVTIFLVYWLNLNAGYDGDIFLTVILNGAIHTVMYTYYFLSMHTKDIWWKKYLTLFQIIQFLTMNAQAIYLLCVGCKGFSPQITKLYLGYILSLLVLFLNFYFKSYSGVKPNGKKPVSKKA 276
BLAST of mRNA_E-siliculosus-1a_F_contig119.1207.1 vs. uniprot
Match: A0A7R9ZKR5_9STRA (Elongation of fatty acids protein n=1 Tax=Craspedostauros australis TaxID=1486917 RepID=A0A7R9ZKR5_9STRA) HSP 1 Score: 316 bits (809), Expect = 3.360e-103 Identity = 152/265 (57.36%), Postives = 188/265 (70.94%), Query Frame = 2
Query: 80 METYKELANGVGDAVLNWAR-NGQTSDATKGWFLTDFATALAIVGAYLVMVTVGPKVMADMSPIDSYPVRFVYNVVQIILCSYMCVEAFMIAYRNGYPVLPCAPFDAENPPAANLLWLFYVSKVLDFMDTIFIVLKKSWRQLSFLHVYHHCTIFLFYWLNVNAGYDGDVYLTIVLNGFIHTVMYTYYFVSMHTKD--------IWWKKYLTLMQMIQFVCMTTQALYLLTTGCTSYPPRIVVVYAGYILSLLFLFAQFYVNSYTK 847
ME Y + +G++++ W + S T+GWFLTDF++A I AY++ V +G +VM + ID YP++F+YNV QI+LC+YM +E +AYRN Y +LPC P++ +P NLLWLFY+SKV DF DTIFIVL K WRQLSFLHVYHH TIFLFYWLN N YDGD++LTIVLNGFIHTVMYTYYF+ MHTKD IWWK YLT+MQM+QFV M +Q YL+ + C R+ Y YILSL FLFAQFYV SY K
Sbjct: 1 MEQYTTTLDSIGESIVRWGDPESKFSGHTEGWFLTDFSSAFTIALAYVLFVAIGSQVMNFLPAIDPYPIKFLYNVSQIMLCAYMTLEGCFLAYRNNYTILPCEPYNQHDPAIGNLLWLFYISKVWDFWDTIFIVLGKKWRQLSFLHVYHHTTIFLFYWLNSNVFYDGDIFLTIVLNGFIHTVMYTYYFICMHTKDKSTGKSLPIWWKSYLTMMQMVQFVTMMSQGSYLVVSQCDQSSLRVSSTYVVYILSLFFLFAQFYVESYMK 265 The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig119.1207.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-siliculosus-1a_F_contig119.1207.1 >prot_E-siliculosus-1a_F_contig119.1207.1 ID=prot_E-siliculosus-1a_F_contig119.1207.1|Name=mRNA_E-siliculosus-1a_F_contig119.1207.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=264bp METYKELANGVGDAVLNWARNGQTSDATKGWFLTDFATALAIVGAYLVMVback to top mRNA from alignment at E-siliculosus-1a_F_contig119:119..4776- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-siliculosus-1a_F_contig119.1207.1 ID=mRNA_E-siliculosus-1a_F_contig119.1207.1|Name=mRNA_E-siliculosus-1a_F_contig119.1207.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=4658bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig119:119..4776- (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top Coding sequence (CDS) from alignment at E-siliculosus-1a_F_contig119:119..4776- >mRNA_E-siliculosus-1a_F_contig119.1207.1 ID=mRNA_E-siliculosus-1a_F_contig119.1207.1|Name=mRNA_E-siliculosus-1a_F_contig119.1207.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=1584bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig119:119..4776- (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top |