mRNA_E-siliculosus-1a_F_contig119.1207.1 (mRNA) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E-siliculosus-1a_F_contig119.1207.1
Unique NamemRNA_E-siliculosus-1a_F_contig119.1207.1
TypemRNA
OrganismEctocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig119.1207.1 vs. uniprot
Match: D7FYS6_ECTSI (Elongation of fatty acids protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FYS6_ECTSI)

HSP 1 Score: 444 bits (1143), Expect = 8.600e-155
Identity = 215/215 (100.00%), Postives = 215/215 (100.00%), Query Frame = 2
Query:  224 MVTVGPKVMADMSPIDSYPVRFVYNVVQIILCSYMCVEAFMIAYRNGYPVLPCAPFDAENPPAANLLWLFYVSKVLDFMDTIFIVLKKSWRQLSFLHVYHHCTIFLFYWLNVNAGYDGDVYLTIVLNGFIHTVMYTYYFVSMHTKDIWWKKYLTLMQMIQFVCMTTQALYLLTTGCTSYPPRIVVVYAGYILSLLFLFAQFYVNSYTKKPTAKNA 868
            MVTVGPKVMADMSPIDSYPVRFVYNVVQIILCSYMCVEAFMIAYRNGYPVLPCAPFDAENPPAANLLWLFYVSKVLDFMDTIFIVLKKSWRQLSFLHVYHHCTIFLFYWLNVNAGYDGDVYLTIVLNGFIHTVMYTYYFVSMHTKDIWWKKYLTLMQMIQFVCMTTQALYLLTTGCTSYPPRIVVVYAGYILSLLFLFAQFYVNSYTKKPTAKNA
Sbjct:    1 MVTVGPKVMADMSPIDSYPVRFVYNVVQIILCSYMCVEAFMIAYRNGYPVLPCAPFDAENPPAANLLWLFYVSKVLDFMDTIFIVLKKSWRQLSFLHVYHHCTIFLFYWLNVNAGYDGDVYLTIVLNGFIHTVMYTYYFVSMHTKDIWWKKYLTLMQMIQFVCMTTQALYLLTTGCTSYPPRIVVVYAGYILSLLFLFAQFYVNSYTKKPTAKNA 215          
BLAST of mRNA_E-siliculosus-1a_F_contig119.1207.1 vs. uniprot
Match: A0A835Z8H5_9STRA (Elongation of fatty acids protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z8H5_9STRA)

HSP 1 Score: 349 bits (895), Expect = 2.930e-116
Identity = 161/261 (61.69%), Postives = 197/261 (75.48%), Query Frame = 2
Query:   86 TYKELANGVGDAVLNWARNGQTSDATKGWFLTDFATALAIVGAYLVMVTVGPKVMADMSPIDS--YPVRFVYNVVQIILCSYMCVEAFMIAYRNGYPVLPCAPFDAENPPAANLLWLFYVSKVLDFMDTIFIVLKKSWRQLSFLHVYHHCTIFLFYWLNVNAGYDGDVYLTIVLNGFIHTVMYTYYFVSMHTKDIWWKKYLTLMQMIQFVCMTTQALYLLTTGCTSYPPRIVVVYAGYILSLLFLFAQFYVNSYTKKPTAK 862
            T +   N VG  ++ WA N + +  T  W + DF +A+ +V AYL  + VG  VM  + P+D+  YP RF+YN+VQI+LCSYMC+EA +IA+RN Y +LPC PF+ +NPP  N+LWLFY+SK+LDF DT+FIVL+K W+QLSFLHVYHH TIFLFYWLN+N GYDGD+YLTIVLNGFIHTVMYTYYFVSMHT  IWWK  LT MQM+QFV M +QALYLLTTGCT+YPPR+   Y  YI SLL LF  F++ SY  K   K
Sbjct:    5 TLESSINSVGTRIIEWATNDRKAGPTADWPMADFYSAVMVVAAYLGFIFVGSFVMKFVQPLDAPTYPFRFIYNIVQIMLCSYMCLEAGIIAHRNNYGILPCVPFNVQNPPVGNVLWLFYISKILDFADTVFIVLRKKWKQLSFLHVYHHTTIFLFYWLNINVGYDGDIYLTIVLNGFIHTVMYTYYFVSMHTDKIWWKSSLTAMQMVQFVTMISQALYLLTTGCTTYPPRVTQAYCLYIFSLLILFGNFFIKSYMPKQGGK 265          
BLAST of mRNA_E-siliculosus-1a_F_contig119.1207.1 vs. uniprot
Match: A0A7S4JGP6_9STRA (Elongation of fatty acids protein n=2 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4JGP6_9STRA)

HSP 1 Score: 341 bits (874), Expect = 4.590e-113
Identity = 170/273 (62.27%), Postives = 200/273 (73.26%), Query Frame = 2
Query:   80 METYKELANGVGDAVLNWAR-NGQTSDATKGWFLTDFATALAIVGAYLVMVTVGPKVM-ADMSPIDSYPVRFVYNVVQIILCSYMCVEAFMIAYRNGYPVLPCAPFDAENPPAANLLWLFYVSKVLDFMDTIFIVLKKSWRQLSFLHVYHHCTIFLFYWLNVNAGYDGDVYLTIVLNGFIHTVMYTYYFVSMHTKD--------IWWKKYLTLMQMIQFVCMTTQALYLLTTGCTSYPPRIVVVYAGYILSLLFLFAQFYVNSYTKKPTAKNA 868
            ME Y    + +G+++LNWA  + Q    T+GWFLTDF TA +I  AY+  V +G  VM + ++ +D YP++F YNV QI+LC+YM +E F++AYRNGY  LPC   D +NPP ANLLWLFYVSKV DF DTIFIVL K WRQLSFLHVYHH TIFLFYWLN +  +DGD+YLTIVLNGFIHTVMYTYYF+ MHTKD        IWWK  LTLMQ+IQF+ M +QA YLL TGC     R+V VY  YILSL FLFAQFYV SYTKKP  K A
Sbjct:    1 MEAYLNTMDSIGESILNWADPDNQFRGYTEGWFLTDFRTAGSIALAYVAFVVIGSAVMKSGVAAMDPYPIKFFYNVSQIMLCAYMTIEGFLLAYRNGYTCLPCIDIDTKNPPLANLLWLFYVSKVWDFWDTIFIVLGKKWRQLSFLHVYHHTTIFLFYWLNAHVNFDGDIYLTIVLNGFIHTVMYTYYFICMHTKDPKTGKSLPIWWKSSLTLMQLIQFITMMSQATYLLVTGCQKTGLRVVSVYFVYILSLFFLFAQFYVASYTKKPKKKAA 273          
BLAST of mRNA_E-siliculosus-1a_F_contig119.1207.1 vs. uniprot
Match: A0A6U1Q8V8_9STRA (Elongation of fatty acids protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A6U1Q8V8_9STRA)

HSP 1 Score: 340 bits (872), Expect = 1.300e-112
Identity = 162/257 (63.04%), Postives = 196/257 (76.26%), Query Frame = 2
Query:   86 TYKELANGVGDAVLNWARNGQTSDATKGWFLTDFATALAIVGAYLVMVTVGPKV--MADMSPIDSYPVRFVYNVVQIILCSYMCVEAFMIAYRNGYPVLPCAPFDAENPPAANLLWLFYVSKVLDFMDTIFIVLKKSWRQLSFLHVYHHCTIFLFYWLNVNAGYDGDVYLTIVLNGFIHTVMYTYYFVSMHTKDIWWKKYLTLMQMIQFVCMTTQALYLLTTGCTSYPPRIVVVYAGYILSLLFLFAQFYVNSYTKK 850
            T+ + A      +L W   G+  + TKGW LTD  +AL I GAYL+ V VG  +  +  +  I  YPV+F+YN+VQ++LCSYM +EA M+A+R GY  LPC PF+A+NPP A +L++FY+SK+LDFMDT FI++ K W+QLSFLHVYHH +IFLFYWLN+N GYDGDVYLTIVLNGFIHTVMYTYYFVS+HTKDIWWK  LT+ QMIQFV M  QA YLL TGC SYPPRIV+ Y  YILSLL LFA F+V SY KK
Sbjct:   14 TFSQWAGDYEQKILAWVSEGRVHEYTKGWPLTDLESALTIAGAYLLFVLVGSMLFKVEAVPAIKLYPVQFLYNIVQVMLCSYMAIEAGMVAFRQGYTCLPCEPFNAKNPPVAEVLYIFYLSKILDFMDTFFIIIGKKWKQLSFLHVYHHTSIFLFYWLNINVGYDGDVYLTIVLNGFIHTVMYTYYFVSLHTKDIWWKSSLTMCQMIQFVTMNAQAGYLLLTGCKSYPPRIVLSYLVYILSLLVLFANFFVQSYLKK 270          
BLAST of mRNA_E-siliculosus-1a_F_contig119.1207.1 vs. uniprot
Match: A0A7R9WGN6_9STRA (Elongation of fatty acids protein n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9WGN6_9STRA)

HSP 1 Score: 336 bits (861), Expect = 4.120e-111
Identity = 164/266 (61.65%), Postives = 198/266 (74.44%), Query Frame = 2
Query:   80 METYKELANGVGDAVLNWAR-NGQTSDATKGWFLTDFATALAIVGAYLVMVTVGPKVM-ADMSPIDSYPVRFVYNVVQIILCSYMCVEAFMIAYRNGYPVLPCAPFDAENPPAANLLWLFYVSKVLDFMDTIFIVLKKSWRQLSFLHVYHHCTIFLFYWLNVNAGYDGDVYLTIVLNGFIHTVMYTYYFVSMHTKD--------IWWKKYLTLMQMIQFVCMTTQALYLLTTGCTSYPPRIVVVYAGYILSLLFLFAQFYVNSYTK 847
            M  Y E  + +G+++L+WA   G+    T+GWFLTDF++A  +  AY+  V +G  VM + ++ +D YP++F+YNV QI+LC+YM +EAF++AYRNGY  LPC   D ENPP ANLLWLFY+SKV DF DT+FIV+ K WRQLSFLHVYHH TIFLFYWLN +  YDGD+YLTI+LNGFIHTVMYTYYF+ MHTKD        IWWK YLTLMQMIQFV M +QA YLL T C     R+V VY  YILSL FLFAQFYV SYTK
Sbjct:    1 MSAYVETMDSIGESILSWADPEGKFRGHTEGWFLTDFSSAGTVALAYVAFVVIGSAVMKSGVAAMDPYPIKFIYNVSQIMLCAYMTIEAFLLAYRNGYTCLPCNNVDTENPPLANLLWLFYISKVWDFWDTVFIVIGKKWRQLSFLHVYHHTTIFLFYWLNSHVNYDGDIYLTILLNGFIHTVMYTYYFICMHTKDPKTGKSLPIWWKSYLTLMQMIQFVTMMSQATYLLGTQCEKTSLRVVFVYLVYILSLFFLFAQFYVQSYTK 266          
BLAST of mRNA_E-siliculosus-1a_F_contig119.1207.1 vs. uniprot
Match: L1IAX0_GUITC (Elongation of fatty acids protein n=2 Tax=Guillardia theta TaxID=55529 RepID=L1IAX0_GUITC)

HSP 1 Score: 333 bits (855), Expect = 3.830e-110
Identity = 162/274 (59.12%), Postives = 201/274 (73.36%), Query Frame = 2
Query:   80 METYKELANGVGDAVLNWARNGQTSD---------ATKGWFLTDFATALAIVGAYLVMVTVGPKVMADMSPID--SYPVRFVYNVVQIILCSYMCVEAFMIAYRNGYPVLPCAPFDAENPPAANLLWLFYVSKVLDFMDTIFIVLKKSWRQLSFLHVYHHCTIFLFYWLNVNAGYDGDVYLTIVLNGFIHTVMYTYYFVSMHTKDIWWKKYLTLMQMIQFVCMTTQALYLLTTGCTSYPPRIVVVYAGYILSLLFLFAQFYVNSYTKKPTAKNA 868
            ME YK  A+ VG  +LN+A N +  D          T+GWFLTDFA+A AI   Y  +V VG  VM     +D  +YP+RFVYN++Q++LCSYM +EA ++AYR+ Y ++PC PF  ENPP A +LWLFY+SKVLDFMDT FIVL K W QLSFLHVYHH TIF+ YW+NVN GYDGD+YLTIVLNGFIHTVMYTYYFVSMHTKDIWWKKYLT+MQMIQF+ M  QA++LL + C ++P ++  +Y  YI+SL  LF  F++ SY   P +K A
Sbjct:    1 MEAYKPWADAVGRQLLNFAANTELFDDSGKAIKPLPTQGWFLTDFASAFAISAIYFALVIVGRIVMIPFRSLDKLTYPIRFVYNILQVMLCSYMTLEAGILAYRHNYNLVPCNPFKTENPPIAPVLWLFYISKVLDFMDTFFIVLGKKWEQLSFLHVYHHLTIFMIYWMNVNVGYDGDIYLTIVLNGFIHTVMYTYYFVSMHTKDIWWKKYLTMMQMIQFITMNGQAIWLLQSNCQTFPRKVTQLYLVYIMSLFALFLNFFIRSYVS-PKSKKA 273          
BLAST of mRNA_E-siliculosus-1a_F_contig119.1207.1 vs. uniprot
Match: A0A1E7FWF4_9STRA (Elongation of fatty acids protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FWF4_9STRA)

HSP 1 Score: 325 bits (832), Expect = 1.010e-106
Identity = 157/272 (57.72%), Postives = 192/272 (70.59%), Query Frame = 2
Query:   80 METYKELANGVGDAVLNWAR-NGQTSDATKGWFLTDFATALAIVGAYLVMVTVGPKVMADMSPIDSYPVRFVYNVVQIILCSYMCVEAFMIAYRNGYPVLPCAPFDAENPPAANLLWLFYVSKVLDFMDTIFIVLKKSWRQLSFLHVYHHCTIFLFYWLNVNAGYDGDVYLTIVLNGFIHTVMYTYYFVSMHTKD--------IWWKKYLTLMQMIQFVCMTTQALYLLTTGCTSYPPRIVVVYAGYILSLLFLFAQFYVNSYTKKPTAKNA 868
            M+ YK     VGDA++ WA    Q +  TKGWFLTDF +A +I   Y++ V +G +VM  +  ID YP++F YNV QI+LC+YM +EA ++AYRNGY ++PC  ++ ++P   NLLWLFYVSKV DF DTIFIVL K WRQLSFLHVYHH TIFLFYWLN N  YDGD+YLTI LNGFIHTVMYTYYF+ MHTKD        IWWK  LTL+Q+ QF+ M +Q LYL+  GC S   R+   Y  YILSL FLFAQF+V SY +   +K A
Sbjct:    1 MDEYKATLESVGDAIIQWADPESQFTGFTKGWFLTDFTSAFSIALVYVLFVIIGSQVMKVLPAIDPYPIKFFYNVSQIMLCAYMTIEACLLAYRNGYTIMPCVGYNRDDPAIGNLLWLFYVSKVWDFWDTIFIVLGKKWRQLSFLHVYHHTTIFLFYWLNANVFYDGDIYLTIALNGFIHTVMYTYYFICMHTKDKKTGKSLPIWWKSSLTLLQLFQFITMMSQGLYLIIFGCESLSIRVTATYVVYILSLFFLFAQFFVASYMQPKKSKTA 272          
BLAST of mRNA_E-siliculosus-1a_F_contig119.1207.1 vs. uniprot
Match: A0A7S2UR25_9STRA (Elongation of fatty acids protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2UR25_9STRA)

HSP 1 Score: 322 bits (826), Expect = 8.430e-106
Identity = 160/271 (59.04%), Postives = 196/271 (72.32%), Query Frame = 2
Query:   80 METYKELANGVGDAVLNWAR-NGQTSDATKGWFLTDFATALAIVGAYLVMVTVGPKVM-ADMSPIDSYPVRFVYNVVQIILCSYMCVEAFMIAYRNGYPVLPCAPFDAENPPAANLLWLFYVSKVLDFMDTIFIVLKKSWRQLSFLHVYHHCTIFLFYWLNVNAGYDGDVYLTIVLNGFIHTVMYTYYFVSMHTK--------DIWWKKYLTLMQMIQFVCMTTQALYLLTTGCTSYPPRIVVVYAGYILSLLFLFAQFYVNSYTKKPTAK 862
            M+TY    + VG+++L+WA  + +    T GWFLTDF +A+ I   Y+V V VG  +M A +  +D YP++FVYNV QI +C+YM VEAF+IAYR GY  LPC  FD ENPP A+LL+LFY+SKV DF DTIFIV+ K WRQLSFLHVYHH TIFLFYWLN +  YDGD+YLTI+LNGFIHTVMYTYYF+ MHTK         IWWK  LT+MQ+IQFV M +QA YLL +GC     R+  +Y  YILSL FLFAQFY++SY+K    K
Sbjct:    1 MDTYVSTMDAVGESILSWADPDSKFRGYTDGWFLTDFTSAITIAIVYVVFVVVGSAIMKAGVPAMDPYPIKFVYNVSQIFMCAYMTVEAFLIAYRAGYHALPCNNFDTENPPLAHLLYLFYLSKVWDFWDTIFIVIGKKWRQLSFLHVYHHTTIFLFYWLNSHVNYDGDIYLTILLNGFIHTVMYTYYFICMHTKVPETGKSLPIWWKSSLTMMQLIQFVSMMSQATYLLVSGCEENTSRVTALYFVYILSLFFLFAQFYISSYSKPKKRK 271          
BLAST of mRNA_E-siliculosus-1a_F_contig119.1207.1 vs. uniprot
Match: A0A1S7C7Q3_9STRA (Elongation of fatty acids protein n=1 Tax=Nannochloropsis oceanica TaxID=145522 RepID=A0A1S7C7Q3_9STRA)

HSP 1 Score: 318 bits (814), Expect = 6.100e-104
Identity = 153/268 (57.09%), Postives = 186/268 (69.40%), Query Frame = 2
Query:   89 YKELANGVGDAVLNWA--RNGQTSDATKGWFLTDFATALAIVGAYLVMVTVGPKVMADMSPIDSYPVRFVYNVVQIILCSYMCVEAFMIAYRNGYPVLPCAPFDAENPPAANLLWLFYVSKVLDFMDTIFIVLKKSWRQLSFLHVYHHCTIFLFYWLNVNAGYDGDVYLTIVLNGFIHTVMYTYYFVSMHTKDIWWKKYLTLMQMIQFVCMTTQALYLLTTGCTSYPPRIVVVYAGYILSLLFLFAQFYVNSYT------KKPTAKNA 868
            Y++    +  A+  WA          T+ W L     ALAI   YL++V VG  +M +  P+  Y ++F YN+ Q+ LCSYMC+EA + AYRN Y  LPC PF+A NPP A LLWLFYVSKV DF DT+FI+L K W QLSFLHVYHH TIFL YWLN+NAGYDGD++LT++LNG IHTVMYTYYF+SMHTKDIWWKKYLTL Q+IQF+ M  QA+YLL  GC  + P+I  +Y GYILSLL LF  FY  SY+      KKP +K A
Sbjct:    9 YQKTCTDLSAAIFKWADPAGAMVKAPTRTWPLAGLDVALAIAAFYLIIVFVGSAMMKNAQPVKLYGLQFFYNISQVALCSYMCIEAAIQAYRNNYTFLPCEPFNATNPPIAPLLWLFYVSKVFDFADTVFIILGKKWNQLSFLHVYHHVTIFLVYWLNLNAGYDGDIFLTVILNGAIHTVMYTYYFLSMHTKDIWWKKYLTLFQIIQFLTMNAQAIYLLCVGCKGFSPQITKLYLGYILSLLVLFLNFYFKSYSGVKPNGKKPVSKKA 276          
BLAST of mRNA_E-siliculosus-1a_F_contig119.1207.1 vs. uniprot
Match: A0A7R9ZKR5_9STRA (Elongation of fatty acids protein n=1 Tax=Craspedostauros australis TaxID=1486917 RepID=A0A7R9ZKR5_9STRA)

HSP 1 Score: 316 bits (809), Expect = 3.360e-103
Identity = 152/265 (57.36%), Postives = 188/265 (70.94%), Query Frame = 2
Query:   80 METYKELANGVGDAVLNWAR-NGQTSDATKGWFLTDFATALAIVGAYLVMVTVGPKVMADMSPIDSYPVRFVYNVVQIILCSYMCVEAFMIAYRNGYPVLPCAPFDAENPPAANLLWLFYVSKVLDFMDTIFIVLKKSWRQLSFLHVYHHCTIFLFYWLNVNAGYDGDVYLTIVLNGFIHTVMYTYYFVSMHTKD--------IWWKKYLTLMQMIQFVCMTTQALYLLTTGCTSYPPRIVVVYAGYILSLLFLFAQFYVNSYTK 847
            ME Y    + +G++++ W     + S  T+GWFLTDF++A  I  AY++ V +G +VM  +  ID YP++F+YNV QI+LC+YM +E   +AYRN Y +LPC P++  +P   NLLWLFY+SKV DF DTIFIVL K WRQLSFLHVYHH TIFLFYWLN N  YDGD++LTIVLNGFIHTVMYTYYF+ MHTKD        IWWK YLT+MQM+QFV M +Q  YL+ + C     R+   Y  YILSL FLFAQFYV SY K
Sbjct:    1 MEQYTTTLDSIGESIVRWGDPESKFSGHTEGWFLTDFSSAFTIALAYVLFVAIGSQVMNFLPAIDPYPIKFLYNVSQIMLCAYMTLEGCFLAYRNNYTILPCEPYNQHDPAIGNLLWLFYISKVWDFWDTIFIVLGKKWRQLSFLHVYHHTTIFLFYWLNSNVFYDGDIFLTIVLNGFIHTVMYTYYFICMHTKDKSTGKSLPIWWKSYLTMMQMVQFVTMMSQGSYLVVSQCDQSSLRVSSTYVVYILSLFFLFAQFYVESYMK 265          
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig119.1207.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FYS6_ECTSI8.600e-155100.00Elongation of fatty acids protein n=2 Tax=Ectocarp... [more]
A0A835Z8H5_9STRA2.930e-11661.69Elongation of fatty acids protein n=1 Tax=Tribonem... [more]
A0A7S4JGP6_9STRA4.590e-11362.27Elongation of fatty acids protein n=2 Tax=Odontell... [more]
A0A6U1Q8V8_9STRA1.300e-11263.04Elongation of fatty acids protein n=1 Tax=Fibrocap... [more]
A0A7R9WGN6_9STRA4.120e-11161.65Elongation of fatty acids protein n=1 Tax=Pseudict... [more]
L1IAX0_GUITC3.830e-11059.12Elongation of fatty acids protein n=2 Tax=Guillard... [more]
A0A1E7FWF4_9STRA1.010e-10657.72Elongation of fatty acids protein n=1 Tax=Fragilar... [more]
A0A7S2UR25_9STRA8.430e-10659.04Elongation of fatty acids protein n=1 Tax=Attheya ... [more]
A0A1S7C7Q3_9STRA6.100e-10457.09Elongation of fatty acids protein n=1 Tax=Nannochl... [more]
A0A7R9ZKR5_9STRA3.360e-10357.36Elongation of fatty acids protein n=1 Tax=Craspedo... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_F_contig119contigE-siliculosus-1a_F_contig119:119..4776 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef902022-09-19
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female2021-02-24
Properties
Property NameValue
Start1
Stop1
Cds size792
Model size1242
Exons8
Ec32 orthologEc-19_002350.1
Ec32 ortholog descriptionFatty acid elongase
Hectar predicted targeting categoryother localisation
BRITEko00000,ko00001,ko00002,ko01000,ko01004
Best eggNOG OGNA|NA|NA
Best tax levelEukaryota
COG Functional cat.I
EC2.3.1.199
EggNOG OGsKOG3071@1,KOG3071@2759
EggNOG free text desc.fatty acid elongation, saturated fatty acid
KEGG ModuleM00415
KEGG Pathwayko00062,ko01110,map00062,map01110
KEGG ReactionR09419,R10825
KEGG koko:K10249
KEGG rclassRC00004,RC02888,RC02997
Seed eggNOG ortholog55529.EKX33396
Seed ortholog evalue2.5e-88
Seed ortholog score332.0
Taxonomic scopeEukaryota
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_F_contig119.1207.1prot_E-siliculosus-1a_F_contig119.1207.1Ectocarpus siliculosus Ec863f_EcPH12_90f femalepolypeptideE-siliculosus-1a_F_contig119 490..4268 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927705.9229157-UTR-E-siliculosus-1a_F_contig119:118..4891622927705.9229157-UTR-E-siliculosus-1a_F_contig119:118..489Ectocarpus siliculosus Ec863f_EcPH12_90f femaleUTRE-siliculosus-1a_F_contig119 119..489 -
1696318646.8188765-UTR-E-siliculosus-1a_F_contig119:118..4891696318646.8188765-UTR-E-siliculosus-1a_F_contig119:118..489Ectocarpus siliculosus Ec863f_EcPH12_90f femaleUTRE-siliculosus-1a_F_contig119 119..489 -
1622927706.0474453-UTR-E-siliculosus-1a_F_contig119:4268..42771622927706.0474453-UTR-E-siliculosus-1a_F_contig119:4268..4277Ectocarpus siliculosus Ec863f_EcPH12_90f femaleUTRE-siliculosus-1a_F_contig119 4269..4277 -
1696318646.914297-UTR-E-siliculosus-1a_F_contig119:4268..42771696318646.914297-UTR-E-siliculosus-1a_F_contig119:4268..4277Ectocarpus siliculosus Ec863f_EcPH12_90f femaleUTRE-siliculosus-1a_F_contig119 4269..4277 -
1622927706.0581079-UTR-E-siliculosus-1a_F_contig119:4706..47761622927706.0581079-UTR-E-siliculosus-1a_F_contig119:4706..4776Ectocarpus siliculosus Ec863f_EcPH12_90f femaleUTRE-siliculosus-1a_F_contig119 4707..4776 -
1696318646.927532-UTR-E-siliculosus-1a_F_contig119:4706..47761696318646.927532-UTR-E-siliculosus-1a_F_contig119:4706..4776Ectocarpus siliculosus Ec863f_EcPH12_90f femaleUTRE-siliculosus-1a_F_contig119 4707..4776 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927705.9413266-CDS-E-siliculosus-1a_F_contig119:489..6131622927705.9413266-CDS-E-siliculosus-1a_F_contig119:489..613Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig119 490..613 -
1696318646.829625-CDS-E-siliculosus-1a_F_contig119:489..6131696318646.829625-CDS-E-siliculosus-1a_F_contig119:489..613Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig119 490..613 -
1622927705.959651-CDS-E-siliculosus-1a_F_contig119:1017..10701622927705.959651-CDS-E-siliculosus-1a_F_contig119:1017..1070Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig119 1018..1070 -
1696318646.839449-CDS-E-siliculosus-1a_F_contig119:1017..10701696318646.839449-CDS-E-siliculosus-1a_F_contig119:1017..1070Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig119 1018..1070 -
1622927705.972158-CDS-E-siliculosus-1a_F_contig119:1463..16161622927705.972158-CDS-E-siliculosus-1a_F_contig119:1463..1616Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig119 1464..1616 -
1696318646.850117-CDS-E-siliculosus-1a_F_contig119:1463..16161696318646.850117-CDS-E-siliculosus-1a_F_contig119:1463..1616Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig119 1464..1616 -
1622927705.9832573-CDS-E-siliculosus-1a_F_contig119:2070..21661622927705.9832573-CDS-E-siliculosus-1a_F_contig119:2070..2166Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig119 2071..2166 -
1696318646.860505-CDS-E-siliculosus-1a_F_contig119:2070..21661696318646.860505-CDS-E-siliculosus-1a_F_contig119:2070..2166Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig119 2071..2166 -
1622927706.001147-CDS-E-siliculosus-1a_F_contig119:2622..27601622927706.001147-CDS-E-siliculosus-1a_F_contig119:2622..2760Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig119 2623..2760 -
1696318646.8756-CDS-E-siliculosus-1a_F_contig119:2622..27601696318646.8756-CDS-E-siliculosus-1a_F_contig119:2622..2760Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig119 2623..2760 -
1622927706.0149937-CDS-E-siliculosus-1a_F_contig119:3388..35291622927706.0149937-CDS-E-siliculosus-1a_F_contig119:3388..3529Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig119 3389..3529 -
1696318646.8858147-CDS-E-siliculosus-1a_F_contig119:3388..35291696318646.8858147-CDS-E-siliculosus-1a_F_contig119:3388..3529Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig119 3389..3529 -
1622927706.0324473-CDS-E-siliculosus-1a_F_contig119:4181..42681622927706.0324473-CDS-E-siliculosus-1a_F_contig119:4181..4268Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig119 4182..4268 -
1696318646.902353-CDS-E-siliculosus-1a_F_contig119:4181..42681696318646.902353-CDS-E-siliculosus-1a_F_contig119:4181..4268Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig119 4182..4268 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E-siliculosus-1a_F_contig119.1207.1

>prot_E-siliculosus-1a_F_contig119.1207.1 ID=prot_E-siliculosus-1a_F_contig119.1207.1|Name=mRNA_E-siliculosus-1a_F_contig119.1207.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=264bp
METYKELANGVGDAVLNWARNGQTSDATKGWFLTDFATALAIVGAYLVMV
TVGPKVMADMSPIDSYPVRFVYNVVQIILCSYMCVEAFMIAYRNGYPVLP
CAPFDAENPPAANLLWLFYVSKVLDFMDTIFIVLKKSWRQLSFLHVYHHC
TIFLFYWLNVNAGYDGDVYLTIVLNGFIHTVMYTYYFVSMHTKDIWWKKY
LTLMQMIQFVCMTTQALYLLTTGCTSYPPRIVVVYAGYILSLLFLFAQFY
VNSYTKKPTAKNA*
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mRNA from alignment at E-siliculosus-1a_F_contig119:119..4776-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E-siliculosus-1a_F_contig119.1207.1 ID=mRNA_E-siliculosus-1a_F_contig119.1207.1|Name=mRNA_E-siliculosus-1a_F_contig119.1207.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=4658bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig119:119..4776- (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
GACGGGCCTCGCGCAACACCCTGCGCACACACGACGGGCGATACCATCGA GGCCAGGGCGATTGACGAAGGTTTGACACTTGTTCCAAGTAGAGATGATA CCGTTGCCTTGATCGTGGGAAGCAACGTGTGATGGAGAGTGTCGCAGAGG CATCTTCGCCAAACCGATCTCTGGGTAGGAGGGAGCGCACTTGATGCAAT CTTGTTCGGTTTTTGTTCGGGCGTGTGTGATGCTGGATGGAGCGGCAGCA CCCATTTTGTTGTTGCGCTGCTCCACCTCATCTTCAGGGTCTCTGTCGTG GAAATGTTCGCTGTGACACCGAGGAGATTTTATGCCTGAGATCGGTCTTG GTGTCACCTGCACCAGCCCACGAATAACACGCCGCCTGGCTGTGTGCTCG TGTTGACATGAAAGAACGAAGAACGTGCCCACAGCAAACAGTTCGATCCA TATACTACTGCTGTAGCTCCCTACTTACCCCGCCCGATGCTCTCCCCAGA TTTCTGCAATGGAGACCTACAAAGAGTTGGCCAACGGTGTCGGGGACGCC GTGCTTAATTGGGCTCGGAATGGGCAAACTTCCGACGCAACAAAGGTGCG AGACATATCGCACTGCTGTACCCTGCACCCAGGAACTACAGCAGTATGTT TATTTCCCGCCCACAAACCCCGCAATACCTGTACAGCACCGCTGTCAACA GCACATTGCTGTAGAGCCTACGCACATGAGGATGACAGTTCTTGATGCCT ACATTGCCGTGGAAGAGGAATGCATTACGTTATCCAGGATGCATGCATGA TAATCGCCGGCACCTTCGGTATGCTTTGCATATGTAGTCCAATTGAATGC ATACAAATGTCTGACAAAAAACGAAAGCAACAGTTACGTTTCTCCCCATC GATGCTTTCGTGTGTCTTGGTAGCCGACGCGATCCCGCCTGGCATGTGTA AGATGCCTGCTAGATCGTAAACAGACAAGCACGTCATACGCGCAAGTGTA GGGTGTACTGCAGTATTTGACAGCTACGACAGTTGACAGTTGTTGCGAGT GTAAGACGATCTTTCGCGGCACACTTGTTCTTTTTTAGAAAGTAAACATA ACCTCACCGAAAGACTACCCATTGGAGATATAACCTCAGTCGAAAGGGAT GTGGTGAAGTATTTTCAGTAAGTGTTCTTTGGTTGCAGCTTCCTGCCATC ATGACGTCATACTGCTGTACCGCCTTGTCATCAACTGAAACCTGCAGGGG TGGTTCCTTACAGACTTCGCTACCGCGCTGGCTATCGTGGGGGCGTATCT CGTCATGGTGACGGTCGGTCCCAAGGTCATGGCAGACATGAGCCCTATCG ACAGCTACCCTGTCCGGTTCGTCTACAACGTCGTACAGGTTTGTCAGCAA CTGCTGTCAGCGCGGAGGCGCGCATGTGTAGTTTGCTTCTTCTTTCTCCG GACCGACTACTGTCTATGCTGTCGGTACCTGGTCTCGTCTAGAACACCAG GTCATCAGCGAGCACTTACAGTAGTACGCGTGCAATACATACGTGAATCG AACGAACTTTCCGAGTATCGAACATATCCTGGTCGCCGCAGCGTCTTGCT AGCATAACGAGGAATCTGGCTCACCCCTAGATTGTGCTCACCAGTTTGGT GGTATCATCACATCAATGCACGCATGATGTTCAATTCACGACCGTAATCT TTACACTACTTGCTGCGACATTTGTTCTCACTCATCCCGCACGCACGCCG AAGACCAAACTCAGATCATACACGAGTTTTGATGTACCCATTGGTCTTCC CGCAATAAATAGCAGATGCACGGCCGTCCTGCCCCATGAGACTGCAGGTA TATCTAGTGATTTTTTTTCTGGTTGAACACAAGGGGAAACAGCAGATTCA CCCCTTGGAAGACCCCGTGCTTTTGAAAGGACACGTTGTTCCATGGTTGA GGTGCTGTTTCACTCGCCAAACGCTCTACTCTCTTGCACCTCCGCACCCC ACTCTACCCTGTGCAGATTATCCTGTGCTCTTACATGTGCGTCGAGGCCT TCATGATCGCGTACCGCAACGGATACCCCGTCCTCCCCTGTGCCCCCTTC GACGCCGAGAACCCCCCCGCGGCCAACTTGCTTTGGCTATTTTACGTCTC CAAGGTGTGTGTGTGACGAGGGTGGGGTGTGCACGACCAACAGAGCGCCC GTCGAAACATGTTTTTGTTTATGCGTTGTACTCCCCGCCCGCCCACTGCT ATTCTATCATATTAGTGTTCTTTTTGCCAAATGCCCGAATCGCTGGCTGT GCCCCATTGACTGCTGTTGACTGCCGTCTTCCTCAAATTTGTTTTGTTGG CCACGTCTGTATGCTACGGTCCAGTAGACACACCAGCAAGGCAAGAGTTT GGTACGCTAACGTAACTGTCCTTGGGCGGGGGTGCTTCCGCAATTGGTCA GTTACTGCAATACCGCTCGTGGATCCATTGCCGCCGGTTCCATTTGCTCT CTCTCCCTCGTGGAATTTTGACTCGCATAAACCGGTCCGTTTGTTGCACC TGCACATACCTCTGTTCTCTCCCACGGTTGTCTTGAATTCTTGAACGTGT TACCCAACAGGTCCTTGACTTCATGGATACCATTTTCATCGTCTTGAAGA AGTCGTGGAGGCAGCTCTCCTTCCTGCACGTGTACCACCACTGCACCATC TTCCTGGTGAGTGGACAGAGCTACTTGGACTGCTGCACTCGCATGGTTTG AGGAATAGCGTTTTACTCTTGTGGCCGAGTTTCTGTGAGACTTTATAGGC GTACCGATGACCGATGGGGTCGAAAACTCCTGAACTCATGCCAGAGAGCA GGAATAAGGCATGGCAAACCAGGGTATAGTTGGTCGATGATCCGCCGCAA AGAGGGTGCACCCGTTGAAATTGTGACCAAAGGAGGGTACTCGGTAGGAT GTTTTTTTTTGTAGACAGAACAGCAGCGTGGGAAAATTATGTGTACATTA TCCTCTGTCGTTGCCCTGTTGGTGATCCGCCGGAGCTCCGTTCGCGCTTT CCCGTTTCCTTGCACATTTTCCCCCCTCTAATTTACATTGCATGATATTG TGTTTCCGACACCAATCGTCCCGTCTTGCGCGTTTTCCTTCGCTTGGATT TTGAAACCAGTTCTACTGGCTGAACGTCAACGCCGGGTACGACGGCGACG TGTACCTCACCATCGTCCTCAATGGCTTCATCCACACCGTCATGTACACC TACTACTTCGTTAGCATGCACACGAAGGATATCTGGTGGAAGAAGTACCT GACGCTCATGCAGGTACGCCTTGATCCTTTGGTGTTTGTTGTTCCCATGG ATTTCTTAGGATGCCAGCACGTGGAACCCGCTTCCACAAGAAGCATGAGT CCATCAGCGCGAGGTACCAGCAGAATCTTTATTGAAACCTTTCTTGGGAT ATGATAGCATACAGTTGGACACATTGTAAGATATTGTAGCGATGTATTTT GTCTCTGGTTGTACGTTCGGAGGGAGAGCGACAACATGCATCACGTAGAC GAACGGGACTGAGGCCGATTTTTTTTCCACGTTTATGATCTAGGCTTTCT TTTTGCCCGAACGCAGCGGTAGCTTCGGTCGGCGGACTACAATGCTGGCT GGTGCCCCAATTGATCGTGCTAGCACATTCCTTGCCTTGATGTTTTCGTC TCGCAGATGATCCAGTTCGTGTGCATGACAACCCAGGCCCTCTACCTCTT GACTACCGGGTGAGTTGGCATCTGCGCTGTGGTTTCGATATTTTTTTTGT CGCAGACCTCTGCAGGGCATCAAGCGGAACGCCTCTCCATCACCTGTGGT TGTGAAGAGCGCGACACGTGCTCATGTTTCGTTTTCTTTTCGGGGGCGTG TTCCATTCCAGATGGGAGCTGTGCACCATTTTATGGCATTGTACGGACGT ATTTTGGCTTCACCAAAACAGGGCAGTACTAGCAACCTCACACGTTGTTG GTATCTAGCTTCGTAAGTTGGGCTAGCAGGGCCGCCCACTGCTGAAATTT CTGTATTCCACATGAATTCATGTGGATTCGCTTCTCGCTGGCTTGTTCCT GACACCAAAGTCCACCATACCCCTTCTTGCGTTGGTTGCCCTTGTGCGTG GGGCGCTCAACAGGTGCACGAGCTACCCTCCCCGCATCGTGGTCGTGTAC GCCGGGTACATCCTTTCCCTGCTCTTCCTGTTCGCCCAGTTCTACGTCAA CAGCTACACCAAGAAGCCCACCGCAAAGAACGCATAGTCCAGCATCGTCG AGCGTCACAAAACCCAGCGCATGAGGGCGGACGAACCTCCGGCGGCTGGT TGGTAGTGGTGTGTTTTTGGCGTTTTTCGAAACGTTTGTGTGGGCGATCG CCCCCTCACTTCTTAAAGCGAGACCTGGTGTCGTCGGCAAATAAGCCGGA GGAAATACGAGTGCGTCCGCGCTTGCGATCATTTTGCGACACGGGCCCCC GGCAGCCAAGCCCAGCTCTTGAGGTTTGCACAACCGTAGCGTTCATGAGA AATAAGGCTACGGTAGGCTGGGCTGTGGCGGGGGCGTCGGGTTGAGAGTG AAATCAACGTCGCGGGGTGTGGCGCCGAGGCTAGCCCTTCGTCGTTCAGG AAAGGGGG
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Coding sequence (CDS) from alignment at E-siliculosus-1a_F_contig119:119..4776-

>mRNA_E-siliculosus-1a_F_contig119.1207.1 ID=mRNA_E-siliculosus-1a_F_contig119.1207.1|Name=mRNA_E-siliculosus-1a_F_contig119.1207.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=1584bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig119:119..4776- (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
ATGGAGACCTACAAAGAGTTGGCCAACGGTGTCGGGGACGCCGTGCTTAA
TTGGGCTCGGAATGGGCAAACTTCCGACGCAACAAAGATGGAGACCTACA
AAGAGTTGGCCAACGGTGTCGGGGACGCCGTGCTTAATTGGGCTCGGAAT
GGGCAAACTTCCGACGCAACAAAGGGGTGGTTCCTTACAGACTTCGCTAC
CGCGCTGGCTATCGTGGGGGCGTATCTCGTCATGGTGACGGTCGGTCCCA
AGGTCATGGCAGACATGAGCCCTATCGACAGCTACCCTGTCCGGTTCGTC
TACAACGTCGTACAGGGGTGGTTCCTTACAGACTTCGCTACCGCGCTGGC
TATCGTGGGGGCGTATCTCGTCATGGTGACGGTCGGTCCCAAGGTCATGG
CAGACATGAGCCCTATCGACAGCTACCCTGTCCGGTTCGTCTACAACGTC
GTACAGATTATCCTGTGCTCTTACATGTGCGTCGAGGCCTTCATGATCGC
GTACCGCAACGGATACCCCGTCCTCCCCTGTGCCCCCTTCGACGCCGAGA
ACCCCCCCGCGGCCAACTTGCTTTGGCTATTTTACGTCTCCAAGATTATC
CTGTGCTCTTACATGTGCGTCGAGGCCTTCATGATCGCGTACCGCAACGG
ATACCCCGTCCTCCCCTGTGCCCCCTTCGACGCCGAGAACCCCCCCGCGG
CCAACTTGCTTTGGCTATTTTACGTCTCCAAGGTCCTTGACTTCATGGAT
ACCATTTTCATCGTCTTGAAGAAGTCGTGGAGGCAGCTCTCCTTCCTGCA
CGTGTACCACCACTGCACCATCTTCCTGGTCCTTGACTTCATGGATACCA
TTTTCATCGTCTTGAAGAAGTCGTGGAGGCAGCTCTCCTTCCTGCACGTG
TACCACCACTGCACCATCTTCCTGTTCTACTGGCTGAACGTCAACGCCGG
GTACGACGGCGACGTGTACCTCACCATCGTCCTCAATGGCTTCATCCACA
CCGTCATGTACACCTACTACTTCGTTAGCATGCACACGAAGGATATCTGG
TGGAAGAAGTACCTGACGCTCATGCAGTTCTACTGGCTGAACGTCAACGC
CGGGTACGACGGCGACGTGTACCTCACCATCGTCCTCAATGGCTTCATCC
ACACCGTCATGTACACCTACTACTTCGTTAGCATGCACACGAAGGATATC
TGGTGGAAGAAGTACCTGACGCTCATGCAGATGATCCAGTTCGTGTGCAT
GACAACCCAGGCCCTCTACCTCTTGACTACCGGATGATCCAGTTCGTGTG
CATGACAACCCAGGCCCTCTACCTCTTGACTACCGGGTGCACGAGCTACC
CTCCCCGCATCGTGGTCGTGTACGCCGGGTACATCCTTTCCCTGCTCTTC
CTGTTCGCCCAGTTCTACGTCAACAGCTACACCAAGAAGCCCACCGCAAA
GAACGCATAGGTGCACGAGCTACCCTCCCCGCATCGTGGTCGTGTACGCC
GGGTACATCCTTTCCCTGCTCTTCCTGTTCGCCCAGTTCTACGTCAACAG
CTACACCAAGAAGCCCACCGCAAAGAACGCATAG
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