mRNA_E-siliculosus-1a_F_contig11839.1180.1 (mRNA) Ectocarpus siliculosus Ec863f_EcPH12_90f female
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Overview
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig11839.1180.1 vs. uniprot
Match: D8LS10_ECTSI (Palmitoyltransferase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LS10_ECTSI) HSP 1 Score: 231 bits (589), Expect = 3.370e-75 Identity = 114/121 (94.21%), Postives = 115/121 (95.04%), Query Frame = 1
Query: 1 PPAAEVEAAGXXXXXSGNGREFAADSRRFCRKCNAYKPVRAHHCSICRRCVVKMDHHCPWVNNCVGIGNHKFFIQFISYVLVISVYALLLAVCRFCACLKNIGACQTSPAKDMAVVFLVVE 363
PPAAEVEAAG SGNGR+FAADSRRFCRKCNAYKPVRAHHCSICRRCVVKMDHHCPWVNNCVGIGNHKFFIQFISYVLVIS YALLLAVCRFCACLKNIGACQTSPAKDMAVVFLVVE
Sbjct: 90 PPAAEVEAAGGGGA-SGNGRDFAADSRRFCRKCNAYKPVRAHHCSICRRCVVKMDHHCPWVNNCVGIGNHKFFIQFISYVLVISAYALLLAVCRFCACLKNIGACQTSPAKDMAVVFLVVE 209
BLAST of mRNA_E-siliculosus-1a_F_contig11839.1180.1 vs. uniprot
Match: A0A6H5JZE7_9PHAE (Palmitoyltransferase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZE7_9PHAE) HSP 1 Score: 221 bits (563), Expect = 9.580e-70 Identity = 113/121 (93.39%), Postives = 114/121 (94.21%), Query Frame = 1
Query: 1 PPAAEVEAAGXXXXXSGNGREFAADSRRFCRKCNAYKPVRAHHCSICRRCVVKMDHHCPWVNNCVGIGNHKFFIQFISYVLVISVYALLLAVCRFCACLKNIGACQTSPAKDMAVVFLVVE 363
PPAAEVEAA XXXX SGNGR+FAADSRRFCRKCNAYKPVRAHHCSICRRCVVKMDHHCPWVNNCVGIGNHKFFIQFISYV VISVYALLLA RFCACLKNIGAC SPAKDMAVVFLVVE
Sbjct: 5 PPAAEVEAAXXXXXASGNGRDFAADSRRFCRKCNAYKPVRAHHCSICRRCVVKMDHHCPWVNNCVGIGNHKFFIQFISYVFVISVYALLLAGWRFCACLKNIGACHYSPAKDMAVVFLVVE 125
BLAST of mRNA_E-siliculosus-1a_F_contig11839.1180.1 vs. uniprot
Match: A0A7S2XW89_9STRA (Palmitoyltransferase n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XW89_9STRA) HSP 1 Score: 127 bits (320), Expect = 1.380e-33 Identity = 54/104 (51.92%), Postives = 76/104 (73.08%), Query Frame = 1
Query: 52 NGREFAADSRRFCRKCNAYKPVRAHHCSICRRCVVKMDHHCPWVNNCVGIGNHKFFIQFISYVLVISVYALLLAVCRFCACLKNIGACQTSPAKDMAVVFLVVE 363
+G + RRFCR+C+AYKP RAHHCS+CRRC+VKMDHHCPW+NNCVG N KFF+QF+ Y ++ +++++L V RF C+ + C PA + ++FL+VE
Sbjct: 130 DGTNTSRRPRRFCRRCSAYKPPRAHHCSMCRRCIVKMDHHCPWINNCVGARNQKFFLQFVGYTFLLCMFSMVLVVARFSMCVGHADDCG-DPAGNFLIIFLIVE 232
BLAST of mRNA_E-siliculosus-1a_F_contig11839.1180.1 vs. uniprot
Match: A0A7S1Z7E9_TRICV (Palmitoyltransferase n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S1Z7E9_TRICV) HSP 1 Score: 127 bits (320), Expect = 2.290e-33 Identity = 58/105 (55.24%), Postives = 73/105 (69.52%), Query Frame = 1
Query: 67 AADSRRFCRKCNAYKPVRAHHCSICRRCVVKMDHHCPWVNNCVGIGNHKFFIQFISYVLVISVYALLLAVCRFCACLKNIGA------CQTSPAKDMAVVFLVVE 363
AA RR CR+CNAYKP RAHHCS+C+RC++KMDHHCPWVNNCVGIGNHK+F+ FI Y + +Y++ L V RF CL + G C P + V+ L+VE
Sbjct: 106 AARGRRICRRCNAYKPARAHHCSVCKRCIIKMDHHCPWVNNCVGIGNHKYFLLFIFYTFLSCLYSMSLCVLRFVQCLGSAGPRHGGGHCLDEPTHILNVIGLMVE 210
BLAST of mRNA_E-siliculosus-1a_F_contig11839.1180.1 vs. uniprot
Match: W7TVR7_9STRA (Palmitoyltransferase n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TVR7_9STRA) HSP 1 Score: 129 bits (325), Expect = 2.790e-33 Identity = 66/110 (60.00%), Postives = 76/110 (69.09%), Query Frame = 1
Query: 46 SGNGREFAADSRRFCRKCNAYKPVRAHHCSICRRCVVKMDHHCPWVNNCVGIGNHKFFIQFISYVLVISVYALLLAVCRFCACLKNIGACQTSPAKDMA----VVFLVVE 363
+G G A R+FCR+CNA+KP RAHHCSICRRCVVKMDHHCPWVNNCVGIGNHK F+ FI YV ++ YAL L + R+ C IG DMA VVFLV+E
Sbjct: 137 AGMGGNPRARVRKFCRRCNAFKPPRAHHCSICRRCVVKMDHHCPWVNNCVGIGNHKLFLLFIFYVFIMCTYALTLVLVRYAGC---IGEEDAEGCDDMAGNLLVVFLVME 243
BLAST of mRNA_E-siliculosus-1a_F_contig11839.1180.1 vs. uniprot
Match: A0A835YRU2_9STRA (Palmitoyltransferase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YRU2_9STRA) HSP 1 Score: 127 bits (320), Expect = 9.610e-33 Identity = 62/106 (58.49%), Postives = 77/106 (72.64%), Query Frame = 1
Query: 4 PAAEVEAA--GXXXXXSGNGREFA-ADSRRFCRKCNAYKPVRAHHCSICRRCVVKMDHHCPWVNNCVGIGNHKFFIQFISYVLVISVYALLLAVCRFCACLKNIGA 312
PAAE+EA G S N E +RR+C +C+AYKP RAHHCS+CRRC+VKMDHHCPW+NNCVGIGNHKFF+QFI Y ++ YAL+L V RF C+ +G+
Sbjct: 106 PAAEIEAGEEGMLLDDSANVEEKRHKPARRWCHRCDAYKPERAHHCSVCRRCIVKMDHHCPWMNNCVGIGNHKFFLQFIGYTFLLCGYALVLIVFRFLTCVGVLGS 211
BLAST of mRNA_E-siliculosus-1a_F_contig11839.1180.1 vs. uniprot
Match: K3WKJ1_GLOUD (Palmitoyltransferase n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WKJ1_GLOUD) HSP 1 Score: 121 bits (303), Expect = 7.140e-31 Identity = 57/94 (60.64%), Postives = 72/94 (76.60%), Query Frame = 1
Query: 82 RFCRKCNAYKPVRAHHCSICRRCVVKMDHHCPWVNNCVGIGNHKFFIQFISYVLVISVYALLLAVCRFCACLKNIGACQTSPAKDMAVVFLVVE 363
R CR+C +KP RAHHCSIC RCV+KMDHHCPWVNNCVG+GNHKFF+ FI YV ++S+YAL+L R+ C+ + C +S A + VVFLV+E
Sbjct: 117 RTCRRCRQFKPGRAHHCSICDRCVIKMDHHCPWVNNCVGLGNHKFFLLFIFYVFILSLYALVLVSLRYARCIND--NCPSSGA--IRVVFLVLE 206
BLAST of mRNA_E-siliculosus-1a_F_contig11839.1180.1 vs. uniprot
Match: F0W2S2_9STRA (Palmitoyltransferase n=2 Tax=Albugo TaxID=65356 RepID=F0W2S2_9STRA) HSP 1 Score: 120 bits (302), Expect = 8.300e-31 Identity = 55/94 (58.51%), Postives = 71/94 (75.53%), Query Frame = 1
Query: 82 RFCRKCNAYKPVRAHHCSICRRCVVKMDHHCPWVNNCVGIGNHKFFIQFISYVLVISVYALLLAVCRFCACLKNIGACQTSPAKDMAVVFLVVE 363
R CR+C +KPVRAHHCSIC RCV+KMDHHCPW+NNCVG+GNHKFF+ FI YV ++S+YA++L R+ C+ N+ T + VVFLV+E
Sbjct: 111 RTCRRCRQFKPVRAHHCSICERCVIKMDHHCPWINNCVGLGNHKFFLLFIFYVFLLSLYAMVLVCIRYAHCV-NVNCPSTGAIR---VVFLVLE 200
BLAST of mRNA_E-siliculosus-1a_F_contig11839.1180.1 vs. uniprot
Match: A0A418DMV4_9STRA (Palmitoyltransferase n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A418DMV4_9STRA) HSP 1 Score: 118 bits (295), Expect = 2.430e-30 Identity = 54/102 (52.94%), Postives = 64/102 (62.75%), Query Frame = 1
Query: 58 REFAADSRRFCRKCNAYKPVRAHHCSICRRCVVKMDHHCPWVNNCVGIGNHKFFIQFISYVLVISVYALLLAVCRFCACLKNIGACQTSPAKDMAVVFLVVE 363
R R CR+C +KP RAHHCSIC RCV+KMDHHCPWVNNCVG+GNHKFF+ FI YV ++S YAL L R+ C+ M VV L +E
Sbjct: 42 RRLEEQRYRTCRRCKTFKPARAHHCSICERCVIKMDHHCPWVNNCVGLGNHKFFLLFIFYVFLLSAYALSLVFTRYAHCIDETSCMYVCVCVVMHVVCLCME 143
BLAST of mRNA_E-siliculosus-1a_F_contig11839.1180.1 vs. uniprot
Match: A0A1V9ZXN1_9STRA (Palmitoyltransferase n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9ZXN1_9STRA) HSP 1 Score: 118 bits (296), Expect = 7.530e-30 Identity = 51/83 (61.45%), Postives = 63/83 (75.90%), Query Frame = 1
Query: 82 RFCRKCNAYKPVRAHHCSICRRCVVKMDHHCPWVNNCVGIGNHKFFIQFISYVLVISVYALLLAVCRFCACLKNIGACQTSPA 330
R CR+C YKP RAHHCSIC RCVVKMDHHCPWVNNCVG+GNHKFF+ F+ YV +++ YA++L V R+ C+ C T+ A
Sbjct: 118 RTCRRCKIYKPARAHHCSICERCVVKMDHHCPWVNNCVGLGNHKFFLLFVFYVFLLATYAMVLVVIRYSHCMNE--TCATTGA 198 The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig11839.1180.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-siliculosus-1a_F_contig11839.1180.1 >prot_E-siliculosus-1a_F_contig11839.1180.1 ID=prot_E-siliculosus-1a_F_contig11839.1180.1|Name=mRNA_E-siliculosus-1a_F_contig11839.1180.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=121bp PPAAEVEAAGGGGGSSGNGREFAADSRRFCRKCNAYKPVRAHHCSICRRCback to top mRNA from alignment at E-siliculosus-1a_F_contig11839:103..1773+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-siliculosus-1a_F_contig11839.1180.1 ID=mRNA_E-siliculosus-1a_F_contig11839.1180.1|Name=mRNA_E-siliculosus-1a_F_contig11839.1180.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=1671bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig11839:103..1773+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top Coding sequence (CDS) from alignment at E-siliculosus-1a_F_contig11839:103..1773+ >mRNA_E-siliculosus-1a_F_contig11839.1180.1 ID=mRNA_E-siliculosus-1a_F_contig11839.1180.1|Name=mRNA_E-siliculosus-1a_F_contig11839.1180.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=726bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig11839:103..1773+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top |