mRNA_E-siliculosus-1a_F_contig1182.1174.1 (mRNA) Ectocarpus siliculosus Ec863f_EcPH12_90f female
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Overview
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig1182.1174.1 vs. uniprot
Match: A0A6H5L9W6_9PHAE (Fe2OG dioxygenase domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5L9W6_9PHAE) HSP 1 Score: 646 bits (1667), Expect = 4.710e-229 Identity = 313/323 (96.90%), Postives = 316/323 (97.83%), Query Frame = 2
Query: 83 MWEPPVVDMESPEAPKVLAKACKDVGFFYVENHGVSKDVMREVFRQSKAFFSLGVDDKMAVKADRHNRGFTPMHEEILDPSKQVKGDTKEGYYIFRELPTPSDGEEDAARPLKGPNQWPSEDLVPGWRATMQRYFTTMHAVGVRLSGLLSVGLGLDPSFFESCTSEMAHALRLLHYSAEVSDPAKGVMGAGAHSDYGLLTLLATDEVPGLQVRLEGEWLDVPPREGAFICNLGDMLQRWRVVC---LRSTVHRVVNKLGRERYSIPFFFELNFDTEVVCLPQCCSEENPAKYPPVTAGSYILNKYSQTHQDFDGNQQNDEKSP 1042
MWEPPVVDMESPEAPKVLAKACK+ GFFYVENHGVSKDVMREVFRQSKAFFSLG+DDKMA+KADRHNRGFTPMHEEILDPSKQVKGDTKEGYYIFRELPTPSDGEED ARPLKGPNQWPSEDLVPGWRATMQRYFTTMHAVGVRLSGLLSVGLGLDPSFFESCTSEMAHALRLLHYSAEVSDPAKGVMGAGAHSDYGLLTLLATDEVPGLQVRL GEWLDVPPREGAFICNLGDMLQRWRVV LRSTVHRVVNKLGRERYSIPFFFELNFDTEVVCLPQCCSEENPAKYPPVTAGSYILNKYSQTHQDFDGNQQNDEKSP
Sbjct: 1 MWEPPVVDMESPEAPKVLAKACKEFGFFYVENHGVSKDVMREVFRQSKAFFSLGIDDKMALKADRHNRGFTPMHEEILDPSKQVKGDTKEGYYIFRELPTPSDGEEDDARPLKGPNQWPSEDLVPGWRATMQRYFTTMHAVGVRLSGLLSVGLGLDPSFFESCTSEMAHALRLLHYSAEVSDPAKGVMGAGAHSDYGLLTLLATDEVPGLQVRLNGEWLDVPPREGAFICNLGDMLQRWRVVTNDELRSTVHRVVNKLGRERYSIPFFFELNFDTEVVCLPQCCSEENPAKYPPVTAGSYILNKYSQTHQDFDGNQQNDEKSP 323
BLAST of mRNA_E-siliculosus-1a_F_contig1182.1174.1 vs. uniprot
Match: D7FYW9_ECTSI (Fe2OG dioxygenase domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FYW9_ECTSI) HSP 1 Score: 514 bits (1323), Expect = 7.490e-177 Identity = 243/315 (77.14%), Postives = 272/315 (86.35%), Query Frame = 2
Query: 83 MWEPPVVDMESPEAPKVLAKACKDVGFFYVENHGVSKDVMREVFRQSKAFFSLGVDDKMAVKADRHNRGFTPMHEEILDPSKQVKGDTKEGYYIFRE--LPTPSDGEEDAARPLKGPNQWPSEDLVPGWRATMQRYFTTMHAVGVRLSGLLSVGLGLDPSFFESCTSEMAHALRLLHYSAEVSDPAKGVMGAGAHSDYGLLTLLATDEVPGLQVRLEGEWLDVPPREGAFICNLGDMLQRWRVVCLRSTVHRVVNKLGRERYSIPFFFELNFDTEVVCLPQCCSEENPAKYPPVTAGSYILNKYSQTHQDFDGNQ 1021
MW PPVVDM+S AP VLAKAC+D GFFYVENHGVS++VMREVFRQSK FFSLG+DDKM+V+AD++NRG+TPMHE++LD Q KGDTKEGYYIFRE +DGE D ARPL GPNQWPSE+LVPGW+ TMQ +F MHAVG RL+GLLSVGLGLDP+ F +C SE AH LRLLHYSAEVSDP KGVMGAGAH+D+GL+TLLATDEVPGLQVRL G+WLD+PPR+GAFICNLGDMLQRW LRSTVHRVVNKLG ERYSIPFFFE NFDTEV C PQ CSEENPA+YPPV AG+Y++ KYSQTHQDFDG Q
Sbjct: 1 MWAPPVVDMDSSSAPAVLAKACRDFGFFYVENHGVSEEVMREVFRQSKLFFSLGMDDKMSVRADKNNRGYTPMHEQVLDLENQTKGDTKEGYYIFREGSAGAAADGEHDDARPLSGPNQWPSEELVPGWKTTMQEHFVRMHAVGERLAGLLSVGLGLDPAVFGTCFSEFAHTLRLLHYSAEVSDPGKGVMGAGAHTDWGLMTLLATDEVPGLQVRLNGKWLDIPPRKGAFICNLGDMLQRWTNDDLRSTVHRVVNKLGLERYSIPFFFEPNFDTEVACFPQFCSEENPARYPPVKAGAYLMGKYSQTHQDFDGYQ 315
BLAST of mRNA_E-siliculosus-1a_F_contig1182.1174.1 vs. uniprot
Match: A0A7J7QM00_9CHLO (Fe2OG dioxygenase domain-containing protein n=1 Tax=Scenedesmus sp. NREL 46B-D3 TaxID=2650976 RepID=A0A7J7QM00_9CHLO) HSP 1 Score: 343 bits (879), Expect = 6.460e-110 Identity = 170/310 (54.84%), Postives = 214/310 (69.03%), Query Frame = 2
Query: 95 PVVDMESPEAPKV--LAKACKDVGFFYVENHGVSKDVMREVFRQSKAFFSLGVDDKMAVKADRHNRGFTPMHEEILDPSKQVKGDTKEGYYIFRELPTPSDGEEDAARPLKGPNQWPSEDLVPGWRATMQRYFTTMHAVGVRLSGLLSVGLGLDPSFFESCTSEMAHALRLLHYSAEVSDPAKGVMGAGAHSDYGLLTLLATDEVPGLQVRLEGEWLDVPPREGAFICNLGDMLQRWRVVCLRSTVHRVVNKLGRERYSIPFFFELNFDTEVVCLPQCCSEENPAKYPPVTAGSYILNKYSQTHQDFDGN 1018
P+VD+ EA + AC GFFY NHG+ ++++ EVFRQ +A F++ + KMA+ AD +NRG+TP EE LDP++Q +GDTKEG+Y RE+ S E+ PL GPNQWP E LVPG+R T+ YF + A+G+RL LL++ LGL P +F + ALR LHY+AEVS P +GV GAGAHSDYG+LTLLATDEVPGLQV L G W +V P GAFI NLGDML+RW +ST+HRV+N G+ERYSIPFFFE NF +V CLP C SE PA YPP TAG ++L Y+QTH +D N
Sbjct: 10 PLVDLSQDEAAAAQQVYAACSGPGFFYAANHGIPQELLSEVFRQMRAAFAMPDEAKMAMLADENNRGYTPYAEETLDPAQQARGDTKEGFYFGREVSADS---EEGKLPLHGPNQWPPEQLVPGFRLTVTAYFDALAALGMRLLRLLALSLGLPPDYFAPHFTHPMVALRPLHYTAEVSAPGQGVFGAGAHSDYGMLTLLATDEVPGLQVHLNGSWQEVAPLPGAFIVNLGDMLERWTNGLFKSTLHRVINTTGQERYSIPFFFEPNFTAKVECLPCCVSEARPAAYPPTTAGEHLLAMYAQTHAGYDVN 316
BLAST of mRNA_E-siliculosus-1a_F_contig1182.1174.1 vs. uniprot
Match: A0A250WWS1_9CHLO (Fe2OG dioxygenase domain-containing protein n=1 Tax=Chlamydomonas eustigma TaxID=1157962 RepID=A0A250WWS1_9CHLO) HSP 1 Score: 343 bits (879), Expect = 1.540e-109 Identity = 166/323 (51.39%), Postives = 217/323 (67.18%), Query Frame = 2
Query: 53 RRLEVTSRHTMWEPPVVDMESPE--APKVLAKACKDVGFFYVENHGVSKDVMREVFRQSKAFFSLGVDDKMAVKADRHNRGFTPMHEEILDPSKQVKGDTKEGYYIFRELPTPSDGEEDAARPLKGPNQWPSEDLVPGWRATMQRYFTTMHAVGVRLSGLLSVGLGLDPSFFESCTSEMAHALRLLHYSAEVSDPAKGVMGAGAHSDYGLLTLLATDEVPGLQVRLEGEWLDVPPREGAFICNLGDMLQRWRVVCLRSTVHRVVNKLGRERYSIPFFFELNFDTEVVCLPQCCSEENPAKYPPVTAGSYILNKYSQTHQDFDG 1015
+ L + R M PV++M E A K++ AC GFFYVENHGV ++ E F Q+K FSL +++K + AD++NRG+TP EE LDP+ Q +GDTKEG+Y RE+P S +A +PL GPNQWP E L+PG R T Q+YF + A+G+RL LL++ L L P +F LR LHYS +SDP +G+ GAGAH+DYG+LT+LATDEVPGLQ+R G+W V PR GAFI NLGDM++RW +ST+HRV+N G ERYSI +FFE FD V CLPQCC +NP +YPP TAG ++L+KY+ TH + G
Sbjct: 23 KALRIDERRKMEAVPVINMALAEGDAAKLVRDACMGPGFFYVENHGVDSQLINETFSQTKKLFSLPLEEKKRLLADKNNRGWTPYQEETLDPAVQKQGDTKEGFYFGREVPADSP---EALKPLHGPNQWPEESLMPGLRDTYQQYFEELRALGMRLLRLLALALDLPPLYFHPYFEPPMIMLRPLHYSGVISDPGEGIFGAGAHTDYGMLTILATDEVPGLQIRQNGKWTHVSPRNGAFIINLGDMVERWTNGSFKSTLHRVINTTGSERYSIAYFFEPCFDAVVECLPQCCGGDNPPRYPPTTAGQHLLDKYAATHAGYTG 342
BLAST of mRNA_E-siliculosus-1a_F_contig1182.1174.1 vs. uniprot
Match: A0A7R9YQ36_9CHLO (Hypothetical protein n=1 Tax=Chlamydomonas euryale TaxID=1486919 RepID=A0A7R9YQ36_9CHLO) HSP 1 Score: 324 bits (831), Expect = 7.230e-103 Identity = 157/309 (50.81%), Postives = 203/309 (65.70%), Query Frame = 2
Query: 95 PVVDME--SPEAPKVLAKACKDVGFFYVENHGVSKDVMREVFRQSKAFFSLGVDDKMAVKADRHNRGFTPMHEEILDPSKQVKGDTKEGYYIFRELPTPSDGEEDAARPLKGPNQWPSEDLVPGWRATMQRYFTTMHAVGVRLSGLLSVGLGLDPSFFESCTSEMAHALRLLHYSAEVSDPAKGVMGAGAHSDYGLLTLLATDEVPGLQVRLEGEWLDVPPREGAFICNLGDMLQRWRVVCLRSTVHRVVNKLGRERYSIPFFFELNFDTEVVCLPQCCSEENPAKYPPVTAGSYILNKYSQTHQDFDG 1015
PV+DM PEA + AC GFFYV NHGV +++ F ++++ F+L +++K + D++NRG+TP EE LDP+ Q GDTKEG+Y RE+ S +A++PL GPNQWP E LVPG R RYF + A+G +L L+++ L L P F+ + +LR LHYS S P GV GAGAH+DYG+LT+L TDEVPGLQ+ G W DVPP GAFI NLGDML+RW ST+HRVVN G+ERYSI FFFE NF+ V CLPQCC + P KYPP TAG ++L+KY+ TH + G
Sbjct: 7 PVIDMSLPEPEAAAAMRAACVGPGFFYVSNHGVDGELVDLTFDRTRSLFALPLEEKQRLLQDKNNRGWTPFQEETLDPANQTCGDTKEGFYFGREIAADSP---EASKPLHGPNQWPDEALVPGLRDAYTRYFNALWALGTKLLRLVALALDLPPDHFDPHFQQPIVSLRPLHYSGTKSAPGDGVFGAGAHTDYGMLTILKTDEVPGLQIHTSGAWRDVPPMPGAFIINLGDMLERWTNGMFHSTLHRVVNTTGQERYSIAFFFEPNFEAIVECLPQCCGPDRPPKYPPTTAGQHLLDKYAATHAGYSG 312
BLAST of mRNA_E-siliculosus-1a_F_contig1182.1174.1 vs. uniprot
Match: A0A7S0S1L0_9CHLO (Hypothetical protein n=1 Tax=Chlamydomonas leiostraca TaxID=1034604 RepID=A0A7S0S1L0_9CHLO) HSP 1 Score: 325 bits (832), Expect = 1.140e-102 Identity = 161/311 (51.77%), Postives = 205/311 (65.92%), Query Frame = 2
Query: 89 EPPVVDMESPE--APKVLAKACKDVGFFYVENHGVSKDVMREVFRQSKAFFSLGVDDKMAVKADRHNRGFTPMHEEILDPSKQVKGDTKEGYYIFRELPTPSDGEEDAARPLKGPNQWPSEDLVPGWRATMQRYFTTMHAVGVRLSGLLSVGLGLDPSFFESCTSEMAHALRLLHYSAEVSDPAKGVMGAGAHSDYGLLTLLATDEVPGLQVRLEGEWLDVPPREGAFICNLGDMLQRWRVVCLRSTVHRVVNKLGRERYSIPFFFELNFDTEVVCLPQCCSEENPAKYPPVTAGSYILNKYSQTHQDFDG 1015
E PV+D+ E L AC+ VGFFY+ HGVS+++M +F ++A F L ++ K A+ AD +NRG+TP EE LDPS Q GDTKEG+Y R++P S +A+ PL GPNQWP E+LVPG+RAT + Y M A+G R+ +L++ LGL P+ FE + LR LHY A SDP GV GAGAH+DYGLLT LATDEVPGLQ+ G W DV PR G I NLGDML+RW RST+HRVV + G+ERYS+ F+E NF V CLP CC + P +YPP TAG +IL+KY+ TH + G
Sbjct: 21 EVPVIDLSQGEEQVAAALKHACESVGFFYLAGHGVSEELMGRLFAANRALFGLPLEQKRAMTADANNRGWTPFREETLDPSVQTTGDTKEGFYFGRDIPADSP---EASLPLHGPNQWPREELVPGYRATAEAYLAAMMALGARMLRVLALSLGLPPAHFERHFTSPMVFLRPLHYDATRSDPDAGVFGAGAHTDYGLLTFLATDEVPGLQIHAGGAWRDVAPRPGCLIVNLGDMLERWTNGRYRSTLHRVVTRGGQERYSVACFYEPNFTARVECLPCCCGPDAPPRYPPTTAGQHILDKYASTHAGYTG 328
BLAST of mRNA_E-siliculosus-1a_F_contig1182.1174.1 vs. uniprot
Match: D8QMT0_SELML (Fe2OG dioxygenase domain-containing protein n=4 Tax=Selaginella moellendorffii TaxID=88036 RepID=D8QMT0_SELML) HSP 1 Score: 322 bits (826), Expect = 9.890e-102 Identity = 163/316 (51.58%), Postives = 209/316 (66.14%), Query Frame = 2
Query: 101 VDMESPEAPKV---LAKACKDVGFFYVENHGVSKDVMREVFRQSKAFFSLGVDDKMAVKADRHNRGFTPMHEEILDPSKQVKGDTKEGYYIFRELPTPSDGEEDAARPLKGPNQWPSEDLVPGWRATMQRYFTTMHAVGVRLSGLLSVGLGLDPSFFES--CTSEMAHALRLLHYSAEVSDPAKGVMGAGAHSDYGLLTLLATDEVPGLQVRLEGE-----WLDVPPREGAFICNLGDMLQRWRVVCLRSTVHRVVNKLGRERYSIPFFFELNFDTEVVCLPQCCSEENPAKYPPVTAGSYILNKYSQTHQDFDGN 1018
+D+ SP+ + L KAC + GFFYV NHG+ + M EVF Q++ FF L +++K V D+ NRG+TP EE LDP KQ+ GD+KEGYYI RE+P + + A P +GPNQWPS +L+PGWR TM++YF + + RL L+++ L LD +FF+ LRLLHY A V++P KG GAGAHSDYG+LTLLATD VPGLQ+ E + W DV P +GAFI NLGDML+RW RST+HRV+N G ERYSIPFF E NFD V CLP CCS NP KYPP+ +G ++ +Y TH+ D N
Sbjct: 21 IDISSPDVKSLALQLRKACLETGFFYVINHGIGEAFMEEVFNQTRKFFELPLEEKTKVLQDKRNRGYTPYSEEKLDPVKQIAGDSKEGYYIGREIP---ETDPRANEPYQGPNQWPSPELLPGWRQTMEKYFQEVENLSRRLIKLIAISLDLDKTFFDKPGMFDHPMALLRLLHYPAGVTNPEKGEFGAGAHSDYGMLTLLATDSVPGLQICKEKDAKKQVWEDVQPIKGAFIVNLGDMLERWTNNLYRSTLHRVLNH-GEERYSIPFFMEPNFDCIVECLPTCCSPSNPPKYPPIKSGDHLTYRYQITHKGLDAN 332
BLAST of mRNA_E-siliculosus-1a_F_contig1182.1174.1 vs. uniprot
Match: A9T7R5_PHYPA (Predicted protein n=2 Tax=Physcomitrium patens TaxID=3218 RepID=A9T7R5_PHYPA) HSP 1 Score: 322 bits (825), Expect = 1.070e-101 Identity = 162/313 (51.76%), Postives = 217/313 (69.33%), Query Frame = 2
Query: 101 VDMESPEAPKVLA---KACKDVGFFYVENHGVSKDVMREVFRQSKAFFSLGVDDKMAVKADRHNRGFTPMHEEILDPSKQVKGDTKEGYYIFRELPTPSDGEEDAARPLKGPNQWPSEDLVPGWRATMQRYFTTMHAVGVRLSGLLSVGLGLDPSFFES--CTSEMAHALRLLHYSAEVSDPAKGVMGAGAHSDYGLLTLLATDEVPGLQV-----RLEGEWLDVPPREGAFICNLGDMLQRWRVVCLRSTVHRVVNKLGRERYSIPFFFELNFDTEVVCLPQCCSEENPAKYPPVTAGSYILNKYSQTHQDF 1009
+DM SP+ A KAC GFFY+ NHGV ++ EVF QSK FFSL +++KM V D+++RG+TP EEILDP Q KGD+KEGYY+ +P + + + +PL GPNQ+PS D++PGW+ TM Y + + + R+S L+++ L L+ ++FE T + +LRLLHYS E S+ G+ G GAHSDYGL+TLLATD+VPGLQ+ + W DVPP +GA+I NLGDML+RW RST+HRVV++ G ERYSIPFFFE N+D V CLP CCSE NP KYPP+T+G+++L+KY QTH+ F
Sbjct: 15 IDMASPDKHSNAARVRKACVTSGFFYIVNHGVDPVLLEEVFTQSKNFFSLPLEEKMKVIHDKNHRGYTPFEEEILDPDTQSKGDSKEGYYVGVPIP---ESDPRSRKPLHGPNQYPSPDVLPGWQETMDHYHSELIKLSKRVSRLIALALNLEETYFEKPGITDDPMASLRLLHYSDEKSNVELGIYGTGAHSDYGLITLLATDDVPGLQICRDKTAVPQVWEDVPPMKGAYIVNLGDMLERWSNGLFRSTLHRVVSQ-GIERYSIPFFFEPNYDCLVECLPTCCSENNPPKYPPMTSGNHLLSKYKQTHKGF 323
BLAST of mRNA_E-siliculosus-1a_F_contig1182.1174.1 vs. uniprot
Match: A0A8J9RD93_9CHLO (2-oxoglutarate-Fe(II) type oxidoreductase hxnY n=1 Tax=Coccomyxa sp. Obi TaxID=2315456 RepID=A0A8J9RD93_9CHLO) HSP 1 Score: 320 bits (821), Expect = 4.230e-101 Identity = 156/320 (48.75%), Postives = 210/320 (65.62%), Query Frame = 2
Query: 89 EPPVVDMESPE--APKVLAKACKDVGFFYVENHGVSKDVMREVFRQSKAFFSLGVDDKMAVKADRHNRGFTPMHEEILDPSKQVKGDTKEGYYIFRELPTPSDGEEDAARPLKGPNQWPSEDLVPGWRATMQRYFTTMHAVGVRLSGLLSVGLGLDPSFFESCTSEMAHALRLLHYSAEVSDPAKGVMGAGAHSDYGLLTLLATDEVPGLQVRLEGEWLDVPPREGAFICNLGDMLQRWRVVCLRSTVHRVVNKLGRERYSIPFFFELNFDTEVVCLPQCCSEENPAKYPPVTAGSYILNKYSQTHQDFDGNQQNDEKSP 1042
E P +D+ PE L KAC D GFFYV NHG+++D++ EVF Q+++FF+L K + AD +NRG+TP+ EE LD Q +GDTKEG Y RE+P S +AA+ L GPNQWPS L+P +R YF + A+G+RL LL++ L ++P FF LR LHY S P +G+ AGAH+DYG+LTLL TD+ PGLQ+ G ++D+PP+ GAFI NLGDML+RW +ST+HRV+ R RYSIPFFFE +FDT V CLP CCS +NP +YPP T+G ++L+KY+QTH +D ++ + P
Sbjct: 4 EVPCLDLSLPEHALSAQLRKACTDTGFFYVANHGIAEDLIEEVFEQNRSFFALPEASKREIVADENNRGWTPLSEETLDTENQTEGDTKEGLYFGREVPADSP---EAAQFLHGPNQWPSPGLLPEYRRVTMAYFDAVTALGMRLLRLLALALNMEPDFFLPMFQRPMLFLRPLHYIPRRSQPDQGIFAAGAHTDYGMLTLLKTDDAPGLQIWSGGRFVDIPPKPGAFIVNLGDMLERWTNGLFKSTLHRVITDGSRHRYSIPFFFEPDFDTRVECLPCCCSPDNPPRYPPTTSGQHLLDKYAQTHSGYDATSKHPKTKP 320
BLAST of mRNA_E-siliculosus-1a_F_contig1182.1174.1 vs. uniprot
Match: D8TU52_VOLCA (Fe2OG dioxygenase domain-containing protein (Fragment) n=1 Tax=Volvox carteri f. nagariensis TaxID=3068 RepID=D8TU52_VOLCA) HSP 1 Score: 316 bits (810), Expect = 8.950e-100 Identity = 157/310 (50.65%), Postives = 204/310 (65.81%), Query Frame = 2
Query: 143 ACKDVGFFYVENHGVSKDVMREVFRQSKAFFSLGVDDKMAVKADRHNRGFTPMHEEILDPSKQVKGDTKEGYYIFRELPTPSDGEEDAARPLKGPNQWPSEDLVPGWRATMQRYFTTMHAVGVRLSGLLSVGLGLDPSFFESCTSEMAHALRLLHYSAEVSDPAKGVMGAGAHSDYGLLTLLATDEVPGLQVRLEG---------EWLDVPPREGAFICNLGDMLQRWRVVCLRSTVHRVVNKLGRERYSIPFFFELNFDTEVVCLPQCCSEENPAKYPPVTAGSYILNKYSQTHQDFDG---NQQNDEK 1036
AC GFFYV NHGV++ ++ + F+Q +A F+L ++ KMA+ + +NRG+TP EE LDP+ Q GDTKEG+Y RE+P S E+ ++PL GPNQWP L+P +R +Y+ ++ +G+RL L+++ L L P +F + ALR LHYS E SDP GV GAGAHSDYG+LT+LATD+VPGLQV G W DV P G FI NLGDML+RW RST+HRV+N GRERYSI FFFE NFD +VV LP CC +NP +YPP TAG ++L+KY+ TH + G QQ EK
Sbjct: 4 ACISSGFFYVSNHGVAESLVYDTFQQQRALFALPLESKMALLQNENNRGYTPFREETLDPAHQKHGDTKEGFYFGREIPEDS---EEVSKPLHGPNQWPDPQLLPRYREVTWQYYEALYGLGMRLLRLVALSLDLPPDYFAAAFDRPMVALRPLHYSGERSDPGAGVFGAGAHSDYGMLTILATDDVPGLQVGGAGGRGRAGGNRRWWDVEPIPGTFIINLGDMLERWTNGRYRSTLHRVINTTGRERYSIAFFFEPNFDAQVVALPCCCGPDNPPRYPPTTAGQHLLDKYAATHAGYHGPGQKQQTQEK 310 The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig1182.1174.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-siliculosus-1a_F_contig1182.1174.1 >prot_E-siliculosus-1a_F_contig1182.1174.1 ID=prot_E-siliculosus-1a_F_contig1182.1174.1|Name=mRNA_E-siliculosus-1a_F_contig1182.1174.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=321bp MWEPPVVDMESPEAPKVLAKACKDVGFFYVENHGVSKDVMREVFRQSKAFback to top mRNA from alignment at E-siliculosus-1a_F_contig1182:27122..33453+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-siliculosus-1a_F_contig1182.1174.1 ID=mRNA_E-siliculosus-1a_F_contig1182.1174.1|Name=mRNA_E-siliculosus-1a_F_contig1182.1174.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=6332bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1182:27122..33453+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top Coding sequence (CDS) from alignment at E-siliculosus-1a_F_contig1182:27122..33453+ >mRNA_E-siliculosus-1a_F_contig1182.1174.1 ID=mRNA_E-siliculosus-1a_F_contig1182.1174.1|Name=mRNA_E-siliculosus-1a_F_contig1182.1174.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=1926bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1182:27122..33453+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top |