mRNA_E-siliculosus-1a_F_contig1180.1167.1 (mRNA) Ectocarpus siliculosus Ec863f_EcPH12_90f female
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Overview
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig1180.1167.1 vs. uniprot
Match: D8LIK7_ECTSI (cGMP-dependent protein kinase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LIK7_ECTSI) HSP 1 Score: 145 bits (366), Expect = 7.700e-39 Identity = 69/73 (94.52%), Postives = 71/73 (97.26%), Query Frame = 2
Query: 2 PSPSTPLCAAFFGVYDGHDGDVVAEALQKGLHKLIAKQK*FTDNISAAIEHGCYEMDIACLDAQFRVLGRERS 220
PSPSTPLCAAFFGVYDGHDGDVVAEALQKGLHKLIAKQK FTD+ISAAIEHGCYEMD ACLDAQFRVLGR+RS
Sbjct: 1880 PSPSTPLCAAFFGVYDGHDGDVVAEALQKGLHKLIAKQKCFTDSISAAIEHGCYEMDTACLDAQFRVLGRDRS 1952
BLAST of mRNA_E-siliculosus-1a_F_contig1180.1167.1 vs. uniprot
Match: A0A6H5L844_9PHAE (PPM-type phosphatase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L844_9PHAE) HSP 1 Score: 136 bits (342), Expect = 1.330e-35 Identity = 65/72 (90.28%), Postives = 69/72 (95.83%), Query Frame = 2
Query: 2 PSPSTPLCAAFFGVYDGHDGDVVAEALQKGLHKLIAKQK*FTDNISAAIEHGCYEMDIACLDAQFRVLGRER 217
PS STPLCAAFFGVYDGHDGDVVAEALQKGLHKLIAKQK FTD+ISAAIE GCYEMDIACL+AQFR+LGR+R
Sbjct: 844 PSLSTPLCAAFFGVYDGHDGDVVAEALQKGLHKLIAKQKCFTDSISAAIERGCYEMDIACLEAQFRMLGRDR 915
BLAST of mRNA_E-siliculosus-1a_F_contig1180.1167.1 vs. uniprot
Match: A0A835YK53_9STRA (Phosphatase 2C-like domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YK53_9STRA) HSP 1 Score: 59.7 bits (143), Expect = 1.040e-8 Identity = 28/57 (49.12%), Postives = 37/57 (64.91%), Query Frame = 2
Query: 26 AAFFGVYDGHDGDVVAEALQKGLHKLIAKQK*FTDNISAAIEHGCYEMDIACLDAQF 196
AA+FGVYDGH GD VAEALQ LH+ I + F ++ S AI Y++D+ CL +
Sbjct: 114 AAYFGVYDGHGGDSVAEALQAQLHRAIVTHQAFHEDRSRAILEATYDVDMQCLSKDY 170
BLAST of mRNA_E-siliculosus-1a_F_contig1180.1167.1 vs. uniprot
Match: A0A836CA24_9STRA (Phosphatase 2C-like domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CA24_9STRA) HSP 1 Score: 58.9 bits (141), Expect = 1.320e-8 Identity = 31/56 (55.36%), Postives = 34/56 (60.71%), Query Frame = 2
Query: 17 PLCAAFFGVYDGHDGDVVAEALQKGLHKLIAKQK*FTDNISAAIEHGCYEMDIACL 184
P AFFGVYDGH G VAEALQ+ LH LI K + A+E C EMD ACL
Sbjct: 52 PPPVAFFGVYDGHGGTAVAEALQQDLHHLIVKNG-LQGDPKQALEQACLEMDKACL 106
BLAST of mRNA_E-siliculosus-1a_F_contig1180.1167.1 vs. uniprot
Match: A0A2D4CEH6_PYTIN (cGMP-dependent protein kinase n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4CEH6_PYTIN) HSP 1 Score: 56.2 bits (134), Expect = 1.830e-7 Identity = 28/62 (45.16%), Postives = 37/62 (59.68%), Query Frame = 2
Query: 29 AFFGVYDGHDGDVVAEALQKGLHKLIAKQK*FTDNISAAIEHGCYEMDIACLDAQFRVLGRE 214
AFFG+YDGH+GD A LQ+ LH+ I F+ + AAI C +D+ LD Q R +G E
Sbjct: 1282 AFFGIYDGHNGDATARLLQQRLHQDILSDAQFSGDPVAAIREVCERVDLEILDQQNRSVGDE 1343
BLAST of mRNA_E-siliculosus-1a_F_contig1180.1167.1 vs. uniprot
Match: A0A2D4BVD0_PYTIN (cGMP-dependent protein kinase n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BVD0_PYTIN) HSP 1 Score: 56.2 bits (134), Expect = 1.840e-7 Identity = 28/62 (45.16%), Postives = 37/62 (59.68%), Query Frame = 2
Query: 29 AFFGVYDGHDGDVVAEALQKGLHKLIAKQK*FTDNISAAIEHGCYEMDIACLDAQFRVLGRE 214
AFFG+YDGH+GD A LQ+ LH+ I F+ + AAI C +D+ LD Q R +G E
Sbjct: 1977 AFFGIYDGHNGDATARLLQQRLHQDILSDAQFSXDPVAAIREVCERVDLEILDQQNRSVGDE 2038
BLAST of mRNA_E-siliculosus-1a_F_contig1180.1167.1 vs. uniprot
Match: A0A7S1CEN6_9STRA (Hypothetical protein n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1CEN6_9STRA) HSP 1 Score: 53.5 bits (127), Expect = 1.620e-6 Identity = 26/55 (47.27%), Postives = 34/55 (61.82%), Query Frame = 2
Query: 29 AFFGVYDGHDGDVVAEALQKGLHKLIAKQK*FTDNISAAIEHGCYEMDIACLDAQ 193
AFFGVYDGHDGD A L K LH IA+ + F + +AA+ G D C++A+
Sbjct: 704 AFFGVYDGHDGDSTAIHLSKRLHYSIAESEAFATDPAAAMTDGYLRTDAECMEAE 758
BLAST of mRNA_E-siliculosus-1a_F_contig1180.1167.1 vs. uniprot
Match: A0A5D6YEV9_9STRA (cGMP-dependent protein kinase n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6YEV9_9STRA) HSP 1 Score: 53.5 bits (127), Expect = 1.640e-6 Identity = 28/57 (49.12%), Postives = 33/57 (57.89%), Query Frame = 2
Query: 29 AFFGVYDGHDGDVVAEALQKGLHKLIAKQK*FTDNISAAIEHGCYEMDIACLDAQFR 199
AFFGVYDGH+G+ A LQK LH + FTD +AI C +D LDAQ R
Sbjct: 1397 AFFGVYDGHNGEDTAVWLQKELHHRVLSHPQFTDEPKSAIFEACDTLDHEILDAQNR 1453
BLAST of mRNA_E-siliculosus-1a_F_contig1180.1167.1 vs. uniprot
Match: A0A1C1CQ02_9EURO (PPM-type phosphatase domain-containing protein n=1 Tax=Cladophialophora carrionii TaxID=86049 RepID=A0A1C1CQ02_9EURO) HSP 1 Score: 49.3 bits (116), Expect = 1.170e-5 Identity = 27/69 (39.13%), Postives = 40/69 (57.97%), Query Frame = 2
Query: 2 PSPSTP-LCAAFFGVYDGHDGDVVAEALQKGLHKLIAKQK*FTD-NISAAIEHGCYEMDIACLDAQFRV 202
P P+ P ++FGVYDGH G+ VA+ + +HK++AKQ F +I A++ G D A L+ RV
Sbjct: 55 PQPAAPDKRLSYFGVYDGHGGEKVAQFAGENIHKIVAKQDAFAKGDIEQALKDGFLATDRAILNGMHRV 123
BLAST of mRNA_E-siliculosus-1a_F_contig1180.1167.1 vs. uniprot
Match: A0A6A5TRE2_9PLEO (PP2C-domain-containing protein n=1 Tax=Byssothecium circinans TaxID=147558 RepID=A0A6A5TRE2_9PLEO) HSP 1 Score: 50.4 bits (119), Expect = 1.930e-5 Identity = 27/53 (50.94%), Postives = 35/53 (66.04%), Query Frame = 2
Query: 29 AFFGVYDGHDGDVVAEALQKGLHKLIAKQK*FTD-NISAAIEHGCYEMDIACL 184
AFFGVYDGH GD VA+ K LH++IAKQ+ F + +I A++ G D A L
Sbjct: 63 AFFGVYDGHGGDKVAQYTGKHLHEIIAKQEAFKEGDIKKALQDGFLATDRAIL 115 The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig1180.1167.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90) Total hits: 17
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-siliculosus-1a_F_contig1180.1167.1 >prot_E-siliculosus-1a_F_contig1180.1167.1 ID=prot_E-siliculosus-1a_F_contig1180.1167.1|Name=mRNA_E-siliculosus-1a_F_contig1180.1167.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=74bp AVAVYAAVRGVLRGVRRPRRGCRRGGPAEGAAQAHRQAEVIHGQHLRRHRback to top mRNA from alignment at E-siliculosus-1a_F_contig1180:27066..27719- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-siliculosus-1a_F_contig1180.1167.1 ID=mRNA_E-siliculosus-1a_F_contig1180.1167.1|Name=mRNA_E-siliculosus-1a_F_contig1180.1167.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=654bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1180:27066..27719- (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top Coding sequence (CDS) from alignment at E-siliculosus-1a_F_contig1180:27066..27719- >mRNA_E-siliculosus-1a_F_contig1180.1167.1 ID=mRNA_E-siliculosus-1a_F_contig1180.1167.1|Name=mRNA_E-siliculosus-1a_F_contig1180.1167.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=444bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1180:27066..27719- (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top |