mRNA_E-siliculosus-1a_F_contig118.1157.1 (mRNA) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview


Name	mRNA_E-siliculosus-1a_F_contig118.1157.1
Unique Name	mRNA_E-siliculosus-1a_F_contig118.1157.1
Type	mRNA
Organism	Ectocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)

Homology

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BLAST of mRNA_E-siliculosus-1a_F_contig118.1157.1 vs. uniprot
Match: D7FKW1_ECTSI (Soluble NSF Attachment Protein (SNAP) Receptor (SNARE) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FKW1_ECTSI)

HSP 1 Score: 457 bits (1177), Expect = 1.250e-161
Identity = 250/251 (99.60%), Postives = 251/251 (100.00%), Query Frame = 1

Query:   82 MSLNSVASHDPFYAVRDEVSAKIEYIKVRLERFQDLLNNTNTAQNRDFQDLRKGLTKEVKGADAQLRDLRRTVEYVENNRDSFAHIDNAELSERKTFLSDSKQVLLRASDALDGQQTKEKMAQDDRSEMAKYRSKGDLGARTEVERDNTEHILDHQSRVRMQLARQDEDLEELGTHVERVGETATVINEELRSQNRLLTALDDDMDEATESMNFVMGRLGKLLKTKSKCQIWTILLLSFILIILVLLLIYV 834
            MSLNSVASHDPFYAVRDEVSAKIEYIKVRLERFQDLLNNTNTAQNRDFQDLRKGLTKEVKGADAQLRDLRRTVEYVENNRDSFAHIDNAELSERKTFLSDSKQVLLRASDALDGQQTKEKMAQDDRSEMAKYRSKGDLGARTEVERDNTEHILDHQSRVRMQLARQDEDLEELGTHVERVGETATVINEELRSQNRLLTALDDDMDEATESMNFVMGRLGKLLKTKSKCQIWTILLLSFILIILVL+LIYV
Sbjct:    1 MSLNSVASHDPFYAVRDEVSAKIEYIKVRLERFQDLLNNTNTAQNRDFQDLRKGLTKEVKGADAQLRDLRRTVEYVENNRDSFAHIDNAELSERKTFLSDSKQVLLRASDALDGQQTKEKMAQDDRSEMAKYRSKGDLGARTEVERDNTEHILDHQSRVRMQLARQDEDLEELGTHVERVGETATVINEELRSQNRLLTALDDDMDEATESMNFVMGRLGKLLKTKSKCQIWTILLLSFILIILVLMLIYV 251

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BLAST of mRNA_E-siliculosus-1a_F_contig118.1157.1 vs. uniprot
Match: A0A7S3K6G0_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3K6G0_9STRA)

HSP 1 Score: 204 bits (519), Expect = 1.310e-61
Identity = 113/235 (48.09%), Postives = 168/235 (71.49%), Query Frame = 1

Query:   79 AMSLNSVASHDPFYAVRDEVSAKIEYIKVRLERFQDLLNNTNTAQNRDFQDLRKGLTKEVKGADAQLRDLRRTVEYVENNRDSFAHIDNAELSERKTFLSDSKQVLLRASDALDGQQTKEKMAQDDRSEMAKYRSKGDLGARTEVERDNTEHILDHQSRVRMQLARQDEDLEELGTHVERVGETATVINEELRSQNRLLTALDDDMDEATESMNFVMGRLGKLLKTKSKCQIWTI 783
            ++ L S ASHDPFY V+DE+  K+E I  RLER+++LL   NTA + +F++++KGL++EVK A+AQ++DL  TVEYVE +R++FAHID+ EL ERK F++ +K  L  A D L G + + K+  D++ ++A  R  G+ GA+T++E  NT+ I +  ++ R  +  QDE+LE L + V+RV   AT I+ EL++Q+RL+  L+++MDE TE MNFVMG+L KLLKTK  CQ+ TI
Sbjct:    9 SVPLMSAASHDPFYVVKDELVNKLESISSRLERYENLLWKINTAASVEFKEVKKGLSREVKAAEAQIKDLALTVEYVEKDRNAFAHIDDRELDERKKFIATTKNKLSGARDVLTGPKARAKIEADEKQQLAATR--GNYGAKTDIEMANTDFIHNQHAQTRTIMQEQDENLEHLDSAVDRVHRMATEIHGELKTQSRLIGDLENEMDETTEKMNFVMGKLAKLLKTKDTCQLLTI 241

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BLAST of mRNA_E-siliculosus-1a_F_contig118.1157.1 vs. uniprot
Match: A0A7S2S2M2_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2S2M2_9STRA)

HSP 1 Score: 201 bits (511), Expect = 1.450e-60
Identity = 111/233 (47.64%), Postives = 161/233 (69.10%), Query Frame = 1

Query:  100 ASHDPFYAVRDEVSAKIEYIKVRLERFQDLLNNTNTAQNRDFQDLRKGLTKEVKGADAQLRDLRRTVEYVENNRDSFAHIDNAELSERKTFLSDSKQVLLRASDALDGQQTKEKMAQDDRSEMAKYRSKGDLGARTEVERDNTEHILDHQSRVRMQLARQDEDLEELGTHVERVGETATVINEELRSQNRLLTALDDDMDEATESMNFVMGRLGKLLKTKSKCQIWTILLLSF 798
            A+ DPFY V+DE++AK+  I+ RL+ F+ LL  T+TA N+DF+D +K L +++K A+ QL+DL  TVE+V+ +R  FAHID+ +L +R T+++++KQ L        G   K K+A D R ++ K  +  +LGA +    +NT  I   Q++ RM + +QDEDLEELG  V+RV + A  IN EL++QNR+L  L+ D+DEATE MNFVMG+L KLLKTK  CQIWT+++L F
Sbjct:    3 AAQDPFYVVKDELTAKVHTIQKRLQTFKRLLETTDTATNQDFKDSKKALGRDLKAAEKQLKDLTLTVEFVQKDRAQFAHIDDYDLQQRTTYIAETKQALGEIKAYYSGDDVKRKLADDMRKDIMKQPT-SNLGATSSDAMENTHFIQGQQAQQRMIMEQQDEDLEELGYAVDRVNDMAVGINTELKTQNRMLKDLESDLDEATEKMNFVMGKLAKLLKTKDTCQIWTVIILFF 234

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BLAST of mRNA_E-siliculosus-1a_F_contig118.1157.1 vs. uniprot
Match: A0A7S2FMQ2_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2FMQ2_9STRA)

HSP 1 Score: 191 bits (484), Expect = 1.690e-56
Identity = 105/231 (45.45%), Postives = 161/231 (69.70%), Query Frame = 1

Query:  100 ASHDPFYAVRDEVSAKIEYIKVRLERFQDLLNNTNTAQNRDFQDLRKGLTKEVKGADAQLRDLRRTVEYVENNRDSFAHIDNAELSERKTFLSDSKQVLLRASDALDGQQTKEKMAQDDRSEMAKYRSKGDLGARTEVERDNTEHILDHQSRVRMQLARQDEDLEELGTHVERVGETATVINEELRSQNRLLTALDDDMDEATESMNFVMGRLGKLLKTKSKCQIWTILLL 792
            AS DPFY V+DE+S KI+ I  +  +F +LL++TNTA++ +F+D R+ L K++K A+ QLRDL  TV+ V+ +R+ FAHID+ EL +R  ++  +++ L        G++ K KM  D+R+E+ + +    LGA    E +NT+ I + Q++ +M + +QDE+LEELG  V+RV + A  INEEL+ QN++L  L++D+DEA E MNFVMG++ KLLKTK  CQIWT+++L
Sbjct:    3 ASVDPFYVVKDELSMKIDAITGKTVKFLELLDSTNTAKSPEFKDARRSLGKDLKSAEKQLRDLTFTVDMVQKDREQFAHIDDYELEQRDAYIKKARKNLNEMKSTYQGERVKRKMIADERAEI-ESKPMSSLGATNSDEAENTQFIHEQQAQGQMIIRQQDEELEELGYAVDRVNDMAVGINEELKVQNQMLKTLEEDIDEAAEKMNFVMGKMAKLLKTKDTCQIWTVIIL 232

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BLAST of mRNA_E-siliculosus-1a_F_contig118.1157.1 vs. uniprot
Match: F0XYP6_AURAN (t-SNARE coiled-coil homology domain-containing protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0XYP6_AURAN)

HSP 1 Score: 187 bits (475), Expect = 5.300e-55
Identity = 107/252 (42.46%), Postives = 176/252 (69.84%), Query Frame = 1

Query:   79 AMSLNSVASHDPFYAVRDEVSAKIEYIKVRLERFQDLLNNTNT-AQNRDFQDLRKGLTKEVKGADAQLRDLRRTVEYVENNRDSFAHIDNAELSERKTFLSDSKQVLLRASDALDGQQTKEKMAQDDRSEMAKYRSKGDLGARTEVERDNTEHILDHQSRVRMQLARQDEDLEELGTHVERVGETATVINEELRSQNRLLTALDDDMDEATESMNFVMGRLGKLLKTKSKCQIWTILLLSFILIILVLLLIY 831
            A  L S  ++DPF+ V+DE+ AK+E I++R+ +F  LL    T A ++ F+D RK L +E++GA+ QL+DL  TV+YVE +R +F+HID+ ELSER+ F++ ++  +  A DA+ G + + KM  DD++ +A  +  GD GA T++E  NT+ I   ++R +  +  QD++LE+L   V+RV   A+ I+ EL++Q+R++  ++ ++DE TE MNFVMG+L KLLKTK  CQ+WTI+ L+ +L+++V+L+I+
Sbjct:    7 AQGLMSGGANDPFHVVKDELVAKLESIELRVGQFNGLLYGPGTTAGSKPFRDCRKALGREIRGAEGQLKDLGLTVDYVERDRGAFSHIDDRELSERRDFVAAARSRVANARDAVGGPRARAKMDADDKAAVAAQQ--GDYGASTDLEMANTDFIHGQRARTQATMREQDDNLEQLDGAVDRVHAMASEIHGELQTQSRMINDMESELDETTEKMNFVMGKLSKLLKTKDTCQLWTIVALTVVLVVMVMLVIW 256

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BLAST of mRNA_E-siliculosus-1a_F_contig118.1157.1 vs. uniprot
Match: A0A836CAK7_9STRA (Soluble NSF attachment protein receptor n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CAK7_9STRA)

HSP 1 Score: 176 bits (447), Expect = 6.700e-51
Identity = 100/228 (43.86%), Postives = 148/228 (64.91%), Query Frame = 1

Query:  100 ASHDPFYAVRDEVSAKIEYIKVRLERFQDLLNNTNTAQNRDFQDLRKGLTKEVKGADAQLRDLRRTVEYVENNRDSFAHIDNAELSERKTFLSDSKQVLLRASDALDGQQTKEKMAQDDRSEMAKYRSKGDLGARTEVERDNTEHILDHQSRVRMQLARQDEDLEELGTHVERVGETATVINEELRSQNRLLTALDDDMDEATESMNFVMGRLGKLLKTKSKCQIWTI 783
            +S DP++  RD+V+AKI  ++ +  +    ++   T  +RD ++L+  + ++++ A  QLRDL+RTV+YVE +R SF HID+AEL +RK FL+  K++L       +G +   K+ ++  ++   YR KGDLGA++  E DNTE I D +S     +ARQD+DLEELG HV+RVG  A  INEELR Q R+L  L++D+    ESM  VMG + K+LKTK + QIW I
Sbjct:    6 SSGDPYFVARDQVAAKIAAVQAKHAQLNAAIDKARTLTDRDVKELKPVVARDLETAKGQLRDLKRTVDYVEKDRASFPHIDDAELRDRKAFLNAQKKILNAIVADTEGDKLAAKLEKETAAKRDSYR-KGDLGAKSNAEADNTEFIHDQRSNRMAHIARQDQDLEELGEHVDRVGMHAETINEELRDQGRMLDDLNEDIVTTHESMGMVMGAMAKILKTKDRAQIWLI 232

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BLAST of mRNA_E-siliculosus-1a_F_contig118.1157.1 vs. uniprot
Match: A0A4D9DA67_9STRA (t-SNARE coiled-coil homology domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9DA67_9STRA)

HSP 1 Score: 167 bits (424), Expect = 1.670e-47
Identity = 102/245 (41.63%), Postives = 153/245 (62.45%), Query Frame = 1

Query:  103 SHDPFYAVRDEVSAKIEYIKVRLERFQDLLNNTNTAQNRDFQDLRKGLTKEVKGADAQLRDLRRTVEYVENNRDSFAHIDNAELSERKTFLSDSKQVLLRASDALDGQQTKEKMAQDDRSEMAKYRSKGDLGARTEVERDNTEHILDHQ-SRVRMQLARQDEDLEELGTHVERVGETATVINEELRSQNRLLTALDDDMDEATESMNFVMGRLGKLLKTKSKCQIWTILLLSFILIILVLLLIYV 834
            + DPF+A R+E+ ++++YI+ + E F  LL  TNTA +   +DLR  L ++++ A+ Q R+L + V  VE NR  F HIDN E+ +R+ F++  KQ L++  + L+    K KM+ D R     +   G  G RT          ++ Q SR  + L  QDE LEELGT V+RVG  A  +N+EL +QNR+L  L+ +++   E M+FVMG+L KLLKTK K Q+W I++L+ +LI+L+LL IYV
Sbjct:    2 AQDPFFAAREELRSRVDYIQTQHENFLRLLQTTNTAPDLSCRDLRDSLCRDIEAAENQCRELEKVVAVVEKNRQRFRHIDNHEIGQRRAFVTKMKQSLVKIWNNLESDYVKNKMSGDRRDPSRSFDG-GAEGHRTGRSGKRANDFIEEQRSRQHLMLCEQDEGLEELGTAVDRVGRMADAMNQELNAQNRMLGDLEVEVENTNEQMSFVMGKLSKLLKTKDKYQLWLIIVLTVVLIVLILLTIYV 245

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BLAST of mRNA_E-siliculosus-1a_F_contig118.1157.1 vs. uniprot
Match: A0A7S3ZTE6_9STRA (Hypothetical protein n=2 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S3ZTE6_9STRA)

HSP 1 Score: 160 bits (404), Expect = 1.970e-43
Identity = 101/252 (40.08%), Postives = 155/252 (61.51%), Query Frame = 1

Query:   79 AMSLNSVASHDPFYAVRDEVSAKIEYIKVRLERFQDLLNNTNTAQ-NRDFQDLRKGLTKEVKGADAQLRDLRRTVEYVENNRDSFAHIDNAELSERKTFLSDSKQVLLRASDALDGQQTKEKMAQDDRSEMAKYRSKGDLGARTEVERDNTEHILDHQSRVRMQLARQDEDLEELGTHVERVGETATVINEELRSQNRLLTALDDDMDEATESMNFVMGRLGKLLKTKSKCQIWTILLLSFILIILVLLLIY 831
            ++ L + A  DPF+ V+DE+  K+  I+ R+  F  LL  + T   N  F++ +K + +EV+ A+AQLRDL  TVEYVE +R +F HI++AEL++RK F+  +K+ +  A DA+ G + + K+  D+++ +A  R  G   A  ++E  NT  I    +RV   +  QDE LE+L                EL +Q R+L  ++D++DE TE MNFVMG+L KLLKTK  CQ+WTI+ L+ +LI++V L+IY
Sbjct:   90 SVPLMASAGGDPFHVVKDELVVKLRSIEGRVATFTTLLYGSGTTHGNPRFREAKKAVAREVRAAEAQLRDLALTVEYVERDRGAFPHINDAELNQRKAFVDKAKRDVASARDAVAGPRARAKIEADEQAALASQR--GAYDASGDLEMQNTAFIHSSHARVAATIQEQDEGLEQLDGAXXXXXXXXXXXXXELSAQARMLDDMEDELDETTEKMNFVMGKLSKLLKTKDTCQLWTIVALTVVLIVMVFLVIY 339

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BLAST of mRNA_E-siliculosus-1a_F_contig118.1157.1 vs. uniprot
Match: A0A1E7FKP6_9STRA (t-SNARE coiled-coil homology domain-containing protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FKP6_9STRA)

HSP 1 Score: 151 bits (381), Expect = 2.030e-40
Identity = 90/235 (38.30%), Postives = 148/235 (62.98%), Query Frame = 1

Query:  109 DPFYAVRDEVSAKIEYIKVRLERFQDLLNNTNTA-QNRDFQDLRKGLTKEVKGADAQLRDLRRTVEYVENNRDSFAHIDNAELSERKTFLSDSKQVLLRASDALDGQQTKEKMAQDDRSEMAKYRSKGDLGARTEVERDNTEHILDHQSRVRMQLARQDEDLEELGTHVERVGETATVINEELRSQNRLLTALDDDMDEATESMNFVMGRLGKLLKTKSKCQIWTILLLSFILII 810
            DP++  R ++  K+E     L  F  +++ T+TA  + +++D +K L + +K A++ LRD+++TV+ VEN+RD F HID+++  ER++ +  S+  +  A D ++    K+K+  D+R+        G LGA+ + ER NT+ ILD+Q++  M +  QDE L+ELG  V RVGE A  I EE+  QN++L  LD+DM  A E +  VMG+L K + TK++ Q+ TI++L+ I II
Sbjct:   61 DPYFVFRSDLQNKLESADEFLADFLRIVHETDTAVSSLEYRDSKKQLKRHLKSAESTLRDVQKTVQAVENDRDKFPHIDDSQFFERRSLVETSRSRIQHAKDEMNSDIIKKKVLSDERNRAVARSGDGLLGAKNDEERQNTDFILDNQAQSSMLMQEQDETLDELGNAVLRVGEMAGTIGEEIGQQNKMLNDLDEDMTTAEEELGMVMGKLAKFMGTKNRGQLKTIVILTLIAII 295

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BLAST of mRNA_E-siliculosus-1a_F_contig118.1157.1 vs. uniprot
Match: A0A067BS24_SAPPC (t-SNARE coiled-coil homology domain-containing protein n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067BS24_SAPPC)

HSP 1 Score: 149 bits (376), Expect = 2.770e-40
Identity = 91/251 (36.25%), Postives = 148/251 (58.96%), Query Frame = 1

Query:   79 AMSLNSVASHDPFYAVRDEVSAKIEYIKVRLERFQDLLNNTNTAQNRDFQDLRKGLTKEVKGADAQLRDLRRTVEYVENNRDSFAHIDNAELSERKTFLSDSKQVLLRASDALDGQQTKEKMAQDDRSEMAKYRSKGDLGARTEVERDNTEHILDHQSRVRMQLARQDEDLEELGTHVERVGETATVINEELRSQNRLLTALDDDMDEATESMNFVMGRLGKLLKTKSKCQIWTILLLSFILIILVLLLIY 831
            A S    AS DP+Y  ++++ +K+  I  + +R++ LL+  N +  +DF  L   L KE+  A+  L  L +++  +E +R  +AHID  E+S RK+F+SD++Q L+  + AL     K K+ +D+R  +A           T    D    + D +   +  +  QD+DL+EL T V R+G+ A  IN E++SQN +L  +D D+D+ TE MNFVMG++ +LLKTK  CQ+  I+ L+ +L+I+V L+IY
Sbjct:    7 AKSAGPSASGDPYYVFKEDLESKVSSIHQKYKRWKHLLDARNASPTKDFGKLTDELAKELATAERSLGFLEQSIRAIEADRTKYAHIDRIEVSSRKSFVSDTRQDLMMMTAALTSDAAKNKVRRDERKALAPL---------TPAPIDRNSILADEKQHQQQIIKEQDKDLDELHTSVSRLGQVAVTINSEIKSQNDMLKDVDADLDDTTERMNFVMGKMSRLLKTKDTCQLGGIIFLTIVLLIMVFLVIY 248

The following BLAST results are available for this feature:

BLAST of mRNA_E-siliculosus-1a_F_contig118.1157.1 vs. uniprot

BLAST of mRNA_E-siliculosus-1a_F_contig118.1157.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
D7FKW1_ECTSI	1.250e-161	99.60	Soluble NSF Attachment Protein (SNAP) Receptor (SN...	[more]
A0A7S3K6G0_9STRA	1.310e-61	48.09	Hypothetical protein n=1 Tax=Aureoumbra lagunensis...	[more]
A0A7S2S2M2_9STRA	1.450e-60	47.64	Hypothetical protein n=1 Tax=Rhizochromulina marin...	[more]
A0A7S2FMQ2_9STRA	1.690e-56	45.45	Hypothetical protein n=1 Tax=Florenciella parvula ...	[more]
F0XYP6_AURAN	5.300e-55	42.46	t-SNARE coiled-coil homology domain-containing pro...	[more]
A0A836CAK7_9STRA	6.700e-51	43.86	Soluble NSF attachment protein receptor n=1 Tax=Tr...	[more]
A0A4D9DA67_9STRA	1.670e-47	41.63	t-SNARE coiled-coil homology domain-containing pro...	[more]
A0A7S3ZTE6_9STRA	1.970e-43	40.08	Hypothetical protein n=2 Tax=Pelagomonas calceolat...	[more]
A0A1E7FKP6_9STRA	2.030e-40	38.30	t-SNARE coiled-coil homology domain-containing pro...	[more]
A0A067BS24_SAPPC	2.770e-40	36.25	t-SNARE coiled-coil homology domain-containing pro...	[more]

Pages

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
E-siliculosus-1a_F_contig118	contig	E-siliculosus-1a_F_contig118:41143..46609 -

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90	2022-09-19
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female	2021-02-24

Properties


Property Name	Value
Start	1
Stop	1
Cds size	756
Model size	837
Exons	8
Ec32 ortholog	Ec-17_001570.1
Ec32 ortholog description	Soluble NSF Attachment Protein (SNAP) Receptor (SNARE)
Hectar predicted targeting category	other localisation
BRITE	br01610,ko00000,ko00001,ko00002,ko01000,ko01003,ko03011,ko04131
Best eggNOG OG	NA\|NA\|NA
Best tax level	Eukaryota
CAZy	GT65,GT68
COG Functional cat.	U
EC	2.4.1.221
EggNOG OGs	KOG3202@1,KOG3202@2759
EggNOG free text desc.	SNAP receptor activity
GOs	GO:0000138,GO:0000139,GO:0000149,GO:0001505,GO:0003674,GO:0003824,GO:0005484,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005737,GO:0005768,GO:0005769,GO:0005770,GO:0005783,GO:0005794,GO:0005795,GO:0005802,GO:0005829,GO:0005886,GO:0006464,GO:0006486,GO:0006493,GO:0006807,GO:0006810,GO:0006836,GO:0006886,GO:0006887,GO:0006897,GO:0006904,GO:0006906,GO:0006996,GO:0007030,GO:0007032,GO:0007154,GO:0007267,GO:0007268,GO:0007269,GO:0008021,GO:0008104,GO:0008150,GO:0008152,GO:0008417,GO:0009058,GO:0009059,GO:0009100,GO:0009101,GO:0009987,GO:0010008,GO:0010256,GO:0012505,GO:0012506,GO:0015031,GO:0015833,GO:0016020,GO:0016021,GO:0016043,GO:0016050,GO:0016079,GO:0016081,GO:0016192,GO:0016197,GO:0016482,GO:0016740,GO:0016757,GO:0016758,GO:0017156,GO:0019538,GO:0019905,GO:0022406,GO:0023052,GO:0023061,GO:0030133,GO:0030135,GO:0030136,GO:0030139,GO:0030285,GO:0030424,GO:0030658,GO:0030659,GO:0030672,GO:0031090,GO:0031201,GO:0031224,GO:0031300,GO:0031301,GO:0031410,GO:0031902,GO:0031974,GO:0031981,GO:0031982,GO:0031984,GO:0031985,GO:0032456,GO:0032588,GO:0032879,GO:0032880,GO:0032940,GO:0032991,GO:0033036,GO:0033267,GO:0034613,GO:0034645,GO:0036065,GO:0036066,GO:0036211,GO:0042147,GO:0042886,GO:0042995,GO:0043005,GO:0043170,GO:0043195,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043412,GO:0043413,GO:0043679,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044306,GO:0044422,GO:0044424,GO:0044425,GO:0044428,GO:0044431,GO:0044433,GO:0044440,GO:0044444,GO:0044446,GO:0044456,GO:0044463,GO:0044464,GO:0045055,GO:0045184,GO:0045202,GO:0045335,GO:0046903,GO:0046907,GO:0046922,GO:0048278,GO:0048284,GO:0048471,GO:0048489,GO:0050789,GO:0051179,GO:0051234,GO:0051640,GO:0051641,GO:0051648,GO:0051649,GO:0051650,GO:0051656,GO:0055037,GO:0060341,GO:0061024,GO:0061025,GO:0065007,GO:0065008,GO:0070013,GO:0070085,GO:0070382,GO:0070727,GO:0071702,GO:0071704,GO:0071705,GO:0071840,GO:0071944,GO:0090161,GO:0090174,GO:0097458,GO:0097479,GO:0097480,GO:0097708,GO:0098563,GO:0098588,GO:0098657,GO:0098791,GO:0098793,GO:0098796,GO:0098805,GO:0098916,GO:0099003,GO:0099501,GO:0099503,GO:0099504,GO:0099536,GO:0099537,GO:0099643,GO:0120025,GO:0120038,GO:0140029,GO:0140056,GO:0140096,GO:0150034,GO:1901135,GO:1901137,GO:1901564,GO:1901566,GO:1901576,GO:1903827
KEGG Module	M00177
KEGG Pathway	ko00514,ko03010,ko04130,map00514,map03010,map04130
KEGG Reaction	R09295
KEGG ko	ko:K02925,ko:K03691,ko:K08498,ko:K08499,ko:K08500
Preferred name	STX6
Seed eggNOG ortholog	2880.D7FKW1
Seed ortholog evalue	2.6e-127
Seed ortholog score	461.5
Taxonomic scope	Eukaryota

Relationships

The following CDS feature(s) are a part of this mRNA:

The following UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
1622927699.3816855-UTR-E-siliculosus-1a_F_contig118:46528..46609	1622927699.3816855-UTR-E-siliculosus-1a_F_contig118:46528..46609	Ectocarpus siliculosus Ec863f_EcPH12_90f female	UTR	E-siliculosus-1a_F_contig118 46529..46609 -
1696318643.5073-UTR-E-siliculosus-1a_F_contig118:46528..46609	1696318643.5073-UTR-E-siliculosus-1a_F_contig118:46528..46609	Ectocarpus siliculosus Ec863f_EcPH12_90f female	UTR	E-siliculosus-1a_F_contig118 46529..46609 -

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type	Position
mRNA_E-siliculosus-1a_F_contig118.1157.1	prot_E-siliculosus-1a_F_contig118.1157.1	Ectocarpus siliculosus Ec863f_EcPH12_90f female	polypeptide	E-siliculosus-1a_F_contig118 41143..46528 -

Sequences

The following sequences are available for this feature:

protein sequence
mRNA from alignment at E-siliculosus-1a_F_contig118:41143..46609-
coding sequence from alignment at E-siliculosus-1a_F_contig118:41143..46609-

protein sequence of mRNA_E-siliculosus-1a_F_contig118.1157.1

>prot_E-siliculosus-1a_F_contig118.1157.1 ID=prot_E-siliculosus-1a_F_contig118.1157.1|Name=mRNA_E-siliculosus-1a_F_contig118.1157.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=252bp
MSLNSVASHDPFYAVRDEVSAKIEYIKVRLERFQDLLNNTNTAQNRDFQD
LRKGLTKEVKGADAQLRDLRRTVEYVENNRDSFAHIDNAELSERKTFLSD
SKQVLLRASDALDGQQTKEKMAQDDRSEMAKYRSKGDLGARTEVERDNTE
HILDHQSRVRMQLARQDEDLEELGTHVERVGETATVINEELRSQNRLLTA
LDDDMDEATESMNFVMGRLGKLLKTKSKCQIWTILLLSFILIILVLLLIY
V*

mRNA from alignment at E-siliculosus-1a_F_contig118:41143..46609-

Legend: UTRpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>mRNA_E-siliculosus-1a_F_contig118.1157.1 ID=mRNA_E-siliculosus-1a_F_contig118.1157.1|Name=mRNA_E-siliculosus-1a_F_contig118.1157.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=5467bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig118:41143..46609- (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
CTGCAAAGTTCTCGTCAGTGCGTTACAGCCAGGAAACACGGAACATACGC
GAGCACGCACCAAGGGCTGGAGCCTTGAGCAATGTCGCTGAATAGCGTGG
CATCGCACGATCCCTTCTACGCAGTGCGAGAGTGAGTCCAAACAAAGAAA
GTTACGCCGCGTTTCGTATTGAGTGATTAGGCGGCGAGGGCAACGCTTCG
AACTTCGACGGTTCTCTTGGCAATTGAATATGTGCATGTGCATGTTGCCT
ACGCTCACCTTGGAACGTTCTAGAGGAAGTGGAAAGAGGGCTACCCTTGA
AACAATCCTTCTAATTGATGGTGTGCCTGTCGTTAGTTCGACTGCTGTTG
TGCTTGGAGCAAACGATTACGAGTACTGCGGGCTGCCGGAATTTGCTCGG
AACACTGCTGTCGTCGTGGTCAGAACACTGACGACGCCGACCTCCGAACT
CCACAGTCGCGCGTGAAGTGGTCTGAAAGCAGCACAATATGCTCATATAG
CAGCATTATATGAAGGCTGGCCGCCTGGCGTCGAGTGCACGTCGCACAAA
CGCCGAGTCCGCCCACGTCCGTTAATAACTAAACACATCTGAGGAAGTTG
TTCTTGCTTCTCCGAGAATTGTAGAAGCAACCTCGTGATCAATGTCTTGT
GTTTAATGTATCATATCCGGCGGCACACCAGTAACGAAACTTTATTGTCA
TGATGCAGGGTAACACCACCGTGCATTTCTTCGTGCCATCGCTCCGCAGG
AGTACCACATCTGATTTCGGTGTGTTCAACCATACCGACCATCCATGTGC
TCGTTGCCAGAACACAAAAGAACAACAGTCTCAACATCCACGGGCCTTCA
ACATCAAAGAAGCAGATCATATTTCGGCACACCGGTCGGAAAGAAGTTGG
TACTGCATGTAGTGGGTACTCGGTTCCCTGTAGCAAGATATGTTTATGTT
GTTCTCAAGGCCATCGTCGGACAATAGAGAACCGCTCTTTGTCCTCAGCC
TGCAGCTCGCAACCTTGAAAGTGTGGTGATGGTGTGCATGCAGAGGTGGT
AGGCTTGGTATCGGCGTAAAACGCTACTCCCTGGTACAGGGGAGAGGAAA
GGAAAATTTCCAACTGACCTTGATTTTGACTGGTTCAAGAACGACCGAAA
GAGGTCTTAGGTCTTAGCGATCACACGACGAGATGCGAAGACAAGTTGGG
AAGTGTTCCATAAGCGGAATACCCCCATTGTCGCCCGGAGCAGCGGTTGG
GACTTGTCGTAAACAGCGTATCACGCTGTCTGTTGTACCTCTCCACACCA
TCTCTAAGTTCAAGACAAAATTCACCAGGGTAAGTGCAAGACGAAGCAGG
CTACACCCCGGGTGCTTTAAACGCGCTTTCTGTGTTACGAAGTATAGAAG
TTCTATGGGAAATCAGTAGAGGGCGGATATCCTGCCGTTTGCCGCCCAGA
TCTGTTAGTTGCTGGGACCGTGCTGTGGAAGGCTGCAGCTGCGGCCCGAA
GTGTCCGCAAGTCTTGGTCCATACTATCCACAATCCACGCTTTACGCACC
ATCAAAGACCCAGTCCCTCCCTCAAACTGCTGCTCGTCCAAGGCGACTGT
TAATAGTGGGGTGAGCTACTGCTGTATCAGCTGCCGCAGGCTCTCGAACC
TCACCACAAGACATGAGCGCAAAACCACATGGCAACTGATGGAAAGCCAG
TGTATCCGCGATGAGGTGGAACTCAATCCTTGCTTCAAAAGAACCAAGAT
ACGCAGGACGTTTTATTTCAGAATGAATGCGCAACGGTGACATCTTCGCC
TGGTCCGGGGCAGTACACACCGTTCCACATTCATATTTTTTCGTTGTGCG
CCGCATGTTGACATTTCTTGTTGGTTGGTATTTGTAGTTTCACATGCAAT
CGAGAAACATAAAAAGCGGAGTATACGATTTGGCCCGTGACTTTCGGGTG
CACAATGTCCACCGCAGCCGTCCGTGCGACGCTGTGATGCGCATGGATGC
CAGGGGGCACTAATCTCCGTGTGTTGCATACGCCCCCCCCCCCGATCAAT
CTGCACAGCAACGCCCTGTTCTCTTCATAATGCAATCTCTTGCCTACATT
TAATGCTCCTTGGAACGTCAGTGAGGTTTCTGCAAAGATTGAGTACATCA
AGGTTCGACTAGAGCGCTTTCAAGATCTGCTCAACAACACCAATACTGCC
CAAAATCGCGACTTTCAGGATCTCAGAAAAGGTAGGTGTGCGGCGGGAAG
TGGGAGGATACGTGCGTGCGGAGACAATAACCAGTACGTGTGTATCAAGC
GTGTCTCGTGCTCCACTTGATTATTGGTCGTATCGTGCGACAGAGAGATG
TGATACGCCAAGCTATGTTTTTATGCGTTGTTTCTATGCTTTGGTCCAAT
CGTACTAGCTATTGACGCTGCGGAGACATCGCGCTTATGTAGCCGCCGTG
GCGGCTGACTCGATGGTAGTCGTTGATTAAGCAGCAACCCAACGGCGTAA
TGCACTTATTCCGGTCGATGTCGTGCTGGTTTGACAATGTTTGGGCAGCA
ATTTTCGTGGTCCGGTCGACTAGCATTGTCTCGTCGATAGGTCTAATGCT
TTTGGTTCTTCGTGTCCCTCCTTGAACAAATTAGGGCTTACCAAGGAGGT
CAAGGGGGCAGACGCCCAACTGAGAGATTTACGGAGGACTGTGGAGTACG
TGGAGAACAATCGAGATTCCTTCGCTCACATCGATAACGTGAGCTGGTCT
GAGATCTAAGTTCGGTCCTTTCGTGGGGTGCCACGACATCTCATGAACAC
CCCTGGGTAGGAGTTTGATTCTAAGGCGTTGGCGAAATCTGTGAACGGAC
GAAGGCCTACTGCCGTGTATGTCATGTACTTGATTCTGGTAATTTGTTTC
ACTTGTTTAGGTTTTGCCATCCGTCGCGTGCTGTGTGGGTGTATGGGTGA
TGTCATGTAGCCCCGTCACCGCATCGTGCTGCAAAGCCGTCTATTGATTA
TGTTTGTCTTGTGGGCACTCTTTGCATAGGGGCGTGGTTGGTGAAGCCCG
TTCGCGTTCTGGATGATCGATGCTACATACGTGCGGTGCATGAATTTCGT
TACTGACATGCGGCTTGTTGTTTGTTGTTGCTTGTGGCAGGCTGAGCTAT
CTGAGCGAAAAACGTTCCTCTCCGACTCGAAACAAGTGTTACTCCGCGCC
AGTGATGCGCTCGACGGGCAGCAAACCAAAGAGAAGATGGCACAAGACGA
CCGGTCGGTAAGTCACACCATGAACCCGACGATGTCGTCTATGTACGTAT
TCTGCACTAGCGTCTATGTACGTATTGTGCACTAGCATCGAAACCTTTCA
GTCAACTCTTCAAGTGACCATTTGTCGTGTTCTCCTATTCTCCTCTGCTG
GCCTTAGGAAATGGCGAAATACCGGAGCAAAGGAGATTTGGGGGCGCGGA
CAGAGGTTGAACGAGACAACACTGAGCACATTCTGGATCATCAGTCACGT
GTTCGAGTAAGTTACTTGTGTGTTGAAGCAGGTGGTTGTAGCATGAAGCA
ACAATGCGGAAGCAGGCGACCCACGACCTAAGCGTGGGCTTTGATCGTTA
GTCGTAAAGGTCATGATTGCGCGATGGTGCGGAGACCTCCCCCCCATGGG
AATTTTCCCGGGGAAGACGTGCTTCCGTTGTGGCGAAATTCCGAGCGATT
CCTTTATAATTTTTGACCCAGACCTAACGCGTATTGTAGATTTTCTCGAT
TTGAGAGCAACGGAAGGCTCACTTTAGAGCACTTTCAGTTCTGATGACAT
GGCAGTTGTCCGTCTCAAAGCAATAATACGTCGAAGTACCTGCGGATAAA
GAACATGGGACGTTTGAGGCCTCCTGCTGATTTGGCAAGCACCGATCTAT
GTGAGGTGTATCAGTGGGACACAGGTCCTTTGTCAGCGGCACAATAATAA
TAACAAACAGTTGTCCCGAAGGAGTGCAACAGCCGGGTTTCTTTGAGACG
TTCGATTTTCAATTGAGCTACGTATGACTCGCAGGCAATGACCTGCTCGA
CACTGGCTGAGTGAATCGCAGTTCCCGTACTTGGTGACGAATCTGCAACA
TCTACTAGAATACAAATTTCCGAGTTGCTCATGCAGTATAGCAGCACAGA
TCTAACCGCAACCGCATGGGGGTTCGCGAGCTCAGATGCAACTTGCGCGA
CAAGATGAAGATCTCGAAGAGCTGGGCACTCACGTAGAGCGGGTCGGTGA
GACAGCGACTGTAATCAACGAGGAGCTCAGGAGTCAAAATAGGTGAAGTA
CAGGTCTCGCCTCGAAGAATCAAGTGTCCAATGCACATCATTTGCTGTGC
ACAGACTCCACAATTAGGTCACTCTGCAGTGCTCAGGTGTTCCATGTTGA
CGAGGTCCGGCCTGCAAGTCGAACGATTTAAAACGTTGCGTCAGGAGTTG
TCATTGGTGCAGATCTAATTGGAAGGGCCTCTCGAGATTTTCAGCCTTGT
AGCGCGGTTTGTTACAACAGTAGCACCCAGGCGCTGAAATATCCAAATCG
GGAGGGGTGCGGGGTCGGGGCTAGACTGTGATTGGCCAAAAGGGGAAAAT
TTGATGAGGCTTTTGGCGTCGGGGCGGAACTCAGCTGTCGCGTGATGGAA
AATTCAATGGCAAAATCAAATTTTGGAAACGTAAAGGTCAACTTGAGACT
GCACCCTCCCATGGTGACGTATTGGCGATGACTGCGCCGAACGCGAGTGG
CACATTGACCTTGCGGAACCCAAATGCATGGCCCGCTGCTGGGAAAAGCT
GTCATGCGTTGATTCTGTGGGCGTGTCGATTATTCGTGCTATCATAATGT
ACGCGGGTCGTTGATGTTCGACCAAGAGAACGAAGTCCGGTCAATGCGAA
GAGGCGGCCAAAAATAGTTTGTGAAGAGGAAGTCTGCGAATGAGGCTTGG
ACCACTGGCACCACCTGCTCATGCTTAGCTCCGTGTTGATGCCAAATAAA
AGGGACAGCGTCCGCATCGTGCACATGGTCTATCGCGTTACCTTTTTGAT
GACCAATCTCGTGTGTCTCTGCATGTCCGCCTTGTACAGGCTGCTGACAG
CGTTGGACGATGACATGGATGAAGCCACAGAAAGCATGAACTTCGTTATG
GGACGGCTAGGGAAGCTGCTCAAAACTAAGAGTGAGTTGTTCGACAGCAG
TAACTCATCGTAACTATTTCAGTTTGTTTCTGCTCCCTTTGAGGCCCCCC
CGTGTACACCTCGCCAAAACTGTTGCAAATCAGGTCGCATTTGGAAACAA
CGCACCAATGAGCATACTGCGACGTTGACCTGTACAAAACTCGCTGTCCC
TTACCCACTGCCGTCTTTCTTTTGCACGTTCTCACCACAGGCAAGTGCCA
AATCTGGACGATTTTGCTACTTTCCTTCATCCTCATTATTTTAGTGCTGC
TGCTCATATATGTTTAG

Coding sequence (CDS) from alignment at E-siliculosus-1a_F_contig118:41143..46609-

>mRNA_E-siliculosus-1a_F_contig118.1157.1 ID=mRNA_E-siliculosus-1a_F_contig118.1157.1|Name=mRNA_E-siliculosus-1a_F_contig118.1157.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=1512bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig118:41143..46609- (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
ATGTCGCTGAATAGCGTGGCATCGCACGATCCCTTCTACGCAGTGCGAGA
ATGTCGCTGAATAGCGTGGCATCGCACGATCCCTTCTACGCAGTGCGAGA
TGAGGTTTCTGCAAAGATTGAGTACATCAAGGTTCGACTAGAGCGCTTTC
AAGATCTGCTCAACAACACCAATACTGCCCAAAATCGCGACTTTCAGGAT
CTCAGAAAAGTGAGGTTTCTGCAAAGATTGAGTACATCAAGGTTCGACTA
GAGCGCTTTCAAGATCTGCTCAACAACACCAATACTGCCCAAAATCGCGA
CTTTCAGGATCTCAGAAAAGGGCTTACCAAGGAGGTCAAGGGGGCAGACG
CCCAACTGAGAGATTTACGGAGGACTGTGGAGTACGTGGAGAACAATCGA
GATTCCTTCGCTCACATCGATAACGGCTTACCAAGGAGGTCAAGGGGGCA
GACGCCCAACTGAGAGATTTACGGAGGACTGTGGAGTACGTGGAGAACAA
TCGAGATTCCTTCGCTCACATCGATAACGCTGAGCTATCTGAGCGAAAAA
CGTTCCTCTCCGACTCGAAACAAGTGTTACTCCGCGCCAGTGATGCGCTC
GACGGGCAGCAAACCAAAGAGAAGATGGCACAAGACGACCGGTCGGCTGA
GCTATCTGAGCGAAAAACGTTCCTCTCCGACTCGAAACAAGTGTTACTCC
GCGCCAGTGATGCGCTCGACGGGCAGCAAACCAAAGAGAAGATGGCACAA
GACGACCGGTCGGAAATGGCGAAATACCGGAGCAAAGGAGATTTGGGGGC
GCGGACAGAGGTTGAACGAGACAACACTGAGCACATTCTGGATCATCAGT
CACGTGTTCGAGAAATGGCGAAATACCGGAGCAAAGGAGATTTGGGGGCG
CGGACAGAGGTTGAACGAGACAACACTGAGCACATTCTGGATCATCAGTC
ACGTGTTCGAATGCAACTTGCGCGACAAGATGAAGATCTCGAAGAGCTGG
GCACTCACGTAGAGCGGGTCGGTGAGACAGCGACTGTAATCAACGAGGAG
CTCAGGAGTCAAAATAGATGCAACTTGCGCGACAAGATGAAGATCTCGAA
GAGCTGGGCACTCACGTAGAGCGGGTCGGTGAGACAGCGACTGTAATCAA
CGAGGAGCTCAGGAGTCAAAATAGGCTGCTGACAGCGTTGGACGATGACA
TGGATGAAGCCACAGAAAGCATGAACTTCGTTATGGGACGGCTAGGGAAG
CTGCTCAAAACTAAGAGCTGCTGACAGCGTTGGACGATGACATGGATGAA
GCCACAGAAAGCATGAACTTCGTTATGGGACGGCTAGGGAAGCTGCTCAA
AACTAAGAGCAAGTGCCAAATCTGGACGATTTTGCTACTTTCCTTCATCC
TCATTATTTTAGTGCTGCTGCTCATATATGTTTAGGCAAGTGCCAAATCT
GGACGATTTTGCTACTTTCCTTCATCCTCATTATTTTAGTGCTGCTGCTC
ATATATGTTTAG