mRNA_E-siliculosus-1a_F_contig118.1156.1 (mRNA) Ectocarpus siliculosus Ec863f_EcPH12_90f female
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Overview
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig118.1156.1 vs. uniprot
Match: D7FKW0_ECTSI (ATG13 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FKW0_ECTSI) HSP 1 Score: 1292 bits (3344), Expect = 0.000e+0 Identity = 662/693 (95.53%), Postives = 671/693 (96.83%), Query Frame = 1
Query: 1 MSSDRSKCEQVVYELLCKVAELVVSSRVSLVQPQRREVNSKFSLHVQELAFVRNSMKAWENNLTLPLGVDIFWVEGGGGDGAPRRELLERWEIMYEAQDAAEGKSAQLRHFFKRSIILLRTLYSLVRLLPAYSVHKRIQSRDVSLADSRDDTGFSLYPLRDGGSCGSGLDFSASGGEDHSGHSGRKSTSCYAFKPLKAPHGSVKVICHYRRGVDSKAYQHGQTNTVTAAPDMTTSLIPDYVTDEYERNAAASRMPAAEVNHDWPKLPSTPEDGASGPDGAVDAYGQHAGNKVSKENTSMMHWPSPELGHGYAEKRTHIGPRQGPAPFLTPGPHRGRPLG-HDVMMEPLELGPNAEIHARGPPLLPAPPVRQENEDVIRVSAQTLSGASGCTESNHVDSHCSNGMIRTAEGGEDGVADRGRALMRPYRRNSISESLSTPSGSGGSRITAGHRHSTATEYTPPFSYNTTGPGLGERNIALGQPLVSFSPPFNAAHVGQRGHDSTFSIRVHSSGPRTPVPTLLEVLPESPFALRKAGTRTPGVPGTAVASSSRPFLPPRLDYSSQEPTFAATSARIDRTELPFAAEVQDNGVSASVDSSVCGVEGGFDSSAAPSTLYALCSAASSKSIFLADPSSEYAEQTAVGFSQERDANDVLSPGAAYTSTAGNLPQEVIVRSLEEDLEGFRLFQQEVLEQRR 2076
MSSDRSKCEQVVYELLCKVAELVVSSRVSL+QPQRREVNSKFSLHVQELAFVRNSMKAWENNLTLPLG+DIFWVEGGG DGAPRRELLERWEIMYEAQDAAEGKSAQLRHFFKRSIILLRTLYSLVRLLPAYSVHKRIQSRDVSLADSRDDTGFSLYPLRDGGSCGSGLDFSASGGEDH+G SGRKSTSCY FKPLKAPHGSVKVICHYRRGVDSKAYQHGQTNTVTAAPDMTTSLIPDYVTDEYERNAAASRMPA EVNHDWPKLPSTPEDGAS PDGAVDAYGQHAGNKVSKENTSMMHWPSPELGHGYAEKRTHIGPRQGPAPFLTPGPHRGRPLG HDVMMEPLELGPNAEIHARGPP PAPPVRQENED+IRVSAQTLSGASG TESNHVDSHCSNGMIRTAEGGEDGVADRGRALMRPYRRNSISESLSTPSGSGGSRITAGHRHSTA EYTPPFSYNTTGP LGERNIALGQPLVSFSPPFNA HVGQRGHDSTFSIRVHSSGPR PVPTLLEVLPESPFALRK GT+ PGVPGTAVASSSRPFLP RLD SSQEPTFAATSA IDRTELPFAAE+QD+GVSASVDSSVCGVEGG DSSAAPSTLYALCSAASSKSIFLADPSSEYAEQTAVGF QERD+NDV SPGA YTSTAG+LPQEVIVRSLEEDLEGFRLFQQEVLEQRR
Sbjct: 1 MSSDRSKCEQVVYELLCKVAELVVSSRVSLIQPQRREVNSKFSLHVQELAFVRNSMKAWENNLTLPLGIDIFWVEGGG-DGAPRRELLERWEIMYEAQDAAEGKSAQLRHFFKRSIILLRTLYSLVRLLPAYSVHKRIQSRDVSLADSRDDTGFSLYPLRDGGSCGSGLDFSASGGEDHAGRSGRKSTSCYTFKPLKAPHGSVKVICHYRRGVDSKAYQHGQTNTVTAAPDMTTSLIPDYVTDEYERNAAASRMPATEVNHDWPKLPSTPEDGASVPDGAVDAYGQHAGNKVSKENTSMMHWPSPELGHGYAEKRTHIGPRQGPAPFLTPGPHRGRPLGRHDVMMEPLELGPNAEIHARGPPHFPAPPVRQENEDLIRVSAQTLSGASGRTESNHVDSHCSNGMIRTAEGGEDGVADRGRALMRPYRRNSISESLSTPSGSGGSRITAGHRHSTAIEYTPPFSYNTTGPDLGERNIALGQPLVSFSPPFNAVHVGQRGHDSTFSIRVHSSGPRAPVPTLLEVLPESPFALRKEGTQPPGVPGTAVASSSRPFLP-RLDCSSQEPTFAATSAGIDRTELPFAAELQDDGVSASVDSSVCGVEGGLDSSAAPSTLYALCSAASSKSIFLADPSSEYAEQTAVGFLQERDSNDVPSPGAEYTSTAGSLPQEVIVRSLEEDLEGFRLFQQEVLEQRR 691
BLAST of mRNA_E-siliculosus-1a_F_contig118.1156.1 vs. uniprot
Match: A0A6H5K5Z1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K5Z1_9PHAE) HSP 1 Score: 82.4 bits (202), Expect = 7.450e-16 Identity = 36/49 (73.47%), Postives = 38/49 (77.55%), Query Frame = 1
Query: 166 MKAWENNLTLPLGVDIFWVEGGGGDGAPRRELLERWEIMYEAQDAAEGK 312
MKAWE +LTLPLG+DIFWVEGGGGDGAP RELLERWEI A K
Sbjct: 1 MKAWEKDLTLPLGIDIFWVEGGGGDGAPGRELLERWEITCVVAYGANAK 49
BLAST of mRNA_E-siliculosus-1a_F_contig118.1156.1 vs. uniprot
Match: K3WW66_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WW66_GLOUD) HSP 1 Score: 91.7 bits (226), Expect = 1.230e-15 Identity = 57/156 (36.54%), Postives = 87/156 (55.77%), Query Frame = 1
Query: 13 RSKCEQVVYELLCKVAELVVSSRVSL---VQPQRREVNSKFSLHVQELAFVRNSMKAWENNLTLPLGVDIFWVEGGGGDGAPRRELLERWEIMYEAQDAAEGKS--------------------AQLRHFFKRSIILLRTLYSLVRLLPAYSVHKR 411
R+K +QVV E L K AEL++ SRV+ +R ++F+L ++E+ FVR++M AW ++ LPL + I+ ++ GG D +R LLE+W +MY A D + S QL+ K+ +LLR LYS +RLLPA+ + KR
Sbjct: 1 RAKTDQVVLEFLYKAAELIIQSRVNFQSEADHRRGNRRARFNLDIEEVQFVRDAMLAWREDVHLPLTIGIY-LDSGGDD---QRVLLEQWSVMY-APDGGDADSYSGLRRNSSSHLTGAARDVIQQLKEVCKKISVLLRALYSFMRLLPAHRLFKR 151
BLAST of mRNA_E-siliculosus-1a_F_contig118.1156.1 vs. uniprot
Match: A0A7S3NNL2_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3NNL2_9STRA) HSP 1 Score: 90.1 bits (222), Expect = 6.120e-15 Identity = 56/142 (39.44%), Postives = 80/142 (56.34%), Query Frame = 1
Query: 4 SSDRSKCEQVVYELLCKVAELVVSSRV-SLVQPQRREVNSKFSLHVQELAFVRNSMKAWENNLTLPLGVDIFWVEGGGGDG-----APRRELLERWEIMYEAQDAA------EGKSAQLRHFFKRSIILLRTLYSLVRLLPA 393
+S SKCEQV++E + K AE+V+ +R+ S Q RR +F++ V E+ VR M+ W +L LPL + I W E + + LLERW+I +E A+ E Q+R +KR +ILLRTLYS + LLPA
Sbjct: 4 NSAASKCEQVMFEAVAKAAEIVLLNRIHSPSQLGRRLGRQRFNMDVDEVDVVRGMMEYWRRDLHLPLRILIVWRENNSTEKKNILQGTKPRLLERWDIQFELASASLSGPNEEELLVQVRSVWKRVVILLRTLYSRMLLLPA 145
BLAST of mRNA_E-siliculosus-1a_F_contig118.1156.1 vs. uniprot
Match: A0A6G0XV64_9STRA (ATG13 domain-containing protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XV64_9STRA) HSP 1 Score: 84.0 bits (206), Expect = 3.960e-13 Identity = 70/218 (32.11%), Postives = 111/218 (50.92%), Query Frame = 1
Query: 1 MSSDRSKCEQVVYELLCKVAELVVSSRVSLVQPQRREVNSKFSLHVQELAFVRNSMKAWENNLTLPLGVDIFWVEGGGGDGAPRRELLERWEIMYEAQDAAEGKSA---QLRHFFKRSIILLRTLYSLVRLLPAYSVHKRIQSRDVSLADSRDDTGFSLYPLRDG-GSCGSGLDFSASGGEDHSGHSGRKSTSCYAFKPLKAPHGSVKVICHYRRGVD 642
+S+ + K +QVV E L K E+V+ SR + QP ++F+L +QEL VR++M+ +++N+T P+ VDIF GA LLERW I Y + A+ QLR +R ILLR +Y L R+LPA+ V R++++ ++D G L L+ GS + + E Y+F P+ P G++++ YR+ D
Sbjct: 40 VSTGKKKTDQVVLEFLYKTVEVVLLSR-AYFQPSTPR-RARFNLDIQELVHVRDAMRMYKDNVTQPVLVDIFM-------GAT---LLERWHISYTSGMQAQSPVDVINQLREVCRRIGILLRAVYCLARILPAFPVGDRLKTQ-------QEDLGHPLVGLQYAIGSVDTDMQVQFDAAEPK---------QRYSFVPIDTPFGTLQLSVLYRKRND 229
BLAST of mRNA_E-siliculosus-1a_F_contig118.1156.1 vs. uniprot
Match: A0A485LN19_9STRA (Aste57867_23525 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LN19_9STRA) HSP 1 Score: 82.0 bits (201), Expect = 1.660e-12 Identity = 66/219 (30.14%), Postives = 105/219 (47.95%), Query Frame = 1
Query: 1 MSSDRSKCEQVVYELLCKVAELVVSSRVSLVQPQRREVNSKFSLHVQELAFVRNSMKAWENNLTLPLGVDIFWVEGGGGDGAPRRELLERWEIMYEAQDAAEGKSA-----QLRHFFKRSIILLRTLYSLVRLLPAYSVHKRIQSRDVSLADSRDDTGFSLYPLRDGGSCGSGLDFSASGGEDHSGHSGRKSTSCYAFKPLKAPHGSVKVICHYRRGVD 642
+S+ + K +QVV E L K E+V+ SR R ++F+L +QEL VR S++ + +N+ PL +DIF LLERW I Y + + KS QLR +R ILLRT+Y LVR+LPA+ V R++++ ++D G + L+ A + + Y+F P++ P G +++ YR+ D
Sbjct: 38 LSTGQKKTDQVVLEFLYKTVEVVLLSRAYFQPTTPRR--ARFNLDIQELTHVRESLRPYRDNVGQPLFLDIFMGS----------TLLERWHISYTS--GMQSKSPVDVINQLREVCRRIGILLRTVYCLVRILPAFPVGTRLKTQ-------QEDLGHVVAGLQ--------YAVGAVDADMRQQFDAAEPKQRYSFVPIETPFGMIQLSVLYRKRND 227
BLAST of mRNA_E-siliculosus-1a_F_contig118.1156.1 vs. uniprot
Match: A0A2P6NID3_9EUKA (Uncharacterized protein n=1 Tax=Planoprotostelium fungivorum TaxID=1890364 RepID=A0A2P6NID3_9EUKA) HSP 1 Score: 81.6 bits (200), Expect = 1.860e-12 Identity = 41/140 (29.29%), Postives = 81/140 (57.86%), Query Frame = 1
Query: 13 RSKCEQVVYELLCKVAELVVSSRVSLVQPQRR------EVNSKFSLHVQELAFVRNSMKAWENNLTLPLGVDIFWVEGGGGDGAPRRE--LLERWEIMYEAQDAAEGKSAQLRHFFKRSIILLRTLYSLVRLLPAYSVHK 408
R+K EQ+V EL K+ ++++ SR+ +VQ + ++N F+L ++E+ + + W N+ +PL + +F+ G P E +LE+W+I E + ++ ++ +KR ++L+R+LYS +R++P YSV +
Sbjct: 13 RTKTEQIVRELYVKLTQVILQSRIPMVQQAAKNGTGKVKINKWFNLELEEVENITQELTPWRQNMYIPLCIKVFFNSSRGMAQHPYEERVMLEKWKIQLEPH-TGQRENVEVPVLYKRLVLLVRSLYSYLRVVPTYSVFR 151
BLAST of mRNA_E-siliculosus-1a_F_contig118.1156.1 vs. uniprot
Match: A0A5N6P6K0_9ASTR (ATG13 domain-containing protein n=2 Tax=Mikania micrantha TaxID=192012 RepID=A0A5N6P6K0_9ASTR) HSP 1 Score: 79.0 bits (193), Expect = 1.400e-11 Identity = 66/289 (22.84%), Postives = 119/289 (41.18%), Query Frame = 1
Query: 7 SDRSKCEQVVYELLCKVAELVVSSRVSLVQP-----------QRREVNSKFSLHVQELAFVRNSMKAWENNLTLPLGVDIFWVE-------GGGGDGAPRRELLERWEIMYEAQDAAEGK--SAQLRHFFKRSIILLRTLYSLVRLLPAYSVHKRIQSRDVSLADSRDDTGFSLYPLRDGGSCGSGLDFSASGGEDHSGHSGRKSTSCYAFKPLKAPHGSVKVICHYRRGVDSKAYQHGQTNTVTAAPDMTTSLIPDYVTDEYER---NAAASRMPAAEVN-----HDW 789
++ + +Q+V + L K +V+ SRV ++ Q ++ + F+L + E + + W NL P+ +DI V+ G G G ++ERW + YE S + +K+SIILLR+LY+++RLLPAY ++++ S+ G CG + + S S + Y F P++A HG + + YR + + + + P++ + TD + N AA+ P + + H W
Sbjct: 9 NEHGRNDQIVSQFLLKSLHIVLESRVPSIRSNGRGGSLSSGGQVKKSDKWFNLALGERLTPLDCLSFWHRNLMEPMIIDIVLVQDMPDLGQNGSGYGTLVETVIERWVVQYEYSRTPPSHQLSESYKKTYKKSIILLRSLYTMMRLLPAYRAYRKLSSK--------------------GRDCGFDIVYKVSSFSAPFSRSEEQMMKLYTFVPVEAQHGHLSISVRYRESLSDFNLE----TSASFPPEIIIDYVGSPATDPFRAFPDNKAATSFPNRDTSRLQRPHSW 273
BLAST of mRNA_E-siliculosus-1a_F_contig118.1156.1 vs. uniprot
Match: A0A1J7GPT9_LUPAN (Uncharacterized protein n=2 Tax=Lupinus TaxID=3869 RepID=A0A1J7GPT9_LUPAN) HSP 1 Score: 79.0 bits (193), Expect = 1.450e-11 Identity = 45/153 (29.41%), Postives = 79/153 (51.63%), Query Frame = 1
Query: 1 MSSDRSKCEQVVYELLCKVAELVVSSRVSLVQP-----------QRREVNSKFSLHVQELAFVRNSMKAWENNLTLPLGVDIFWVEGGGGDGAPRRELLERWEIMYEAQDAAEGKSAQL----RHFFKRSIILLRTLYSLVRLLPAYSVHKRI 414
M + SK EQ+VY+ L K +++ SRV ++P + R+ + F+L + + +++ W NL P+ +DI V G G ++ERW + YE ++ + + +K+SI+L RTLYS +RLLPAY + +++
Sbjct: 8 MQPESSKLEQIVYQFLLKSLHIILDSRVPSLRPHDRSGELSTGSRARKSDKWFNLVLGDRPSALDNLNFWHKNLMDPMIIDIILVHEGTGSSV--ETVIERWVVQYECPRVMAPQTGDITGSYKKTYKKSIVLFRTLYSQMRLLPAYRIFRQL 158
BLAST of mRNA_E-siliculosus-1a_F_contig118.1156.1 vs. uniprot
Match: UPI00092E4D40 (autophagy-related protein 13a-like isoform X3 n=1 Tax=Lupinus angustifolius TaxID=3871 RepID=UPI00092E4D40) HSP 1 Score: 78.2 bits (191), Expect = 1.880e-11 Identity = 63/256 (24.61%), Postives = 110/256 (42.97%), Query Frame = 1
Query: 1 MSSDRSKCEQVVYELLCKVAELVVSSRVSLVQP-----------QRREVNSKFSLHVQELAFVRNSMKAWENNLTLPLGVDIFWVEGGGGDGAPRRELLERWEIMYEAQDAAEGKSAQL----RHFFKRSIILLRTLYSLVRLLPAYSVHKRIQSRDVSLADSRDDTGFSLYPLRDGGSCGSGLDFSASGGEDHSGHSGRKSTSCYAFKPLKAPHGSVKVICHYRRGVDSKAYQHGQTNTVTAAPDMTTSLIPDYV 723
M + K EQ+VY+ L K +++ SRV ++P + R + F+L + + +++ W NL P+ +DI V G G ++ERW + YE ++ + + +K+SI+L R+LYS +RLLPAY + +++ G S Y +C + + S D + + Y F P++AP G + + YR + Q +P + +I DYV
Sbjct: 8 MQHESGKLEQIVYQFLLKSLHIILDSRVPSLRPSDRSGELSTGSRARRSDKWFNLALGDRPSALDNLNFWHRNLMDPMIIDIILVHEGTGTSV--ETVIERWVVQYECPRVTAPQTGDITGSYKKTYKKSIVLFRSLYSQMRLLPAYRIFRQL--------------GTSSY------TCNFDIIYKVSSFSDPFSLAEGGNLEEYNFPPVEAPPGRLIISVTYRATLSEYNLQ--------CSPALLPKIITDYV 233 The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig118.1156.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-siliculosus-1a_F_contig118.1156.1 >prot_E-siliculosus-1a_F_contig118.1156.1 ID=prot_E-siliculosus-1a_F_contig118.1156.1|Name=mRNA_E-siliculosus-1a_F_contig118.1156.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=693bp MSSDRSKCEQVVYELLCKVAELVVSSRVSLVQPQRREVNSKFSLHVQELAback to top mRNA from alignment at E-siliculosus-1a_F_contig118:34629..40293+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-siliculosus-1a_F_contig118.1156.1 ID=mRNA_E-siliculosus-1a_F_contig118.1156.1|Name=mRNA_E-siliculosus-1a_F_contig118.1156.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=5665bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig118:34629..40293+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top Coding sequence (CDS) from alignment at E-siliculosus-1a_F_contig118:34629..40293+ >mRNA_E-siliculosus-1a_F_contig118.1156.1 ID=mRNA_E-siliculosus-1a_F_contig118.1156.1|Name=mRNA_E-siliculosus-1a_F_contig118.1156.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=4158bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig118:34629..40293+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top |