mRNA_E-siliculosus-1a_F_contig1178.1147.1 (mRNA) Ectocarpus siliculosus Ec863f_EcPH12_90f female
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Overview
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig1178.1147.1 vs. uniprot
Match: D7FPS8_ECTSI (Hypothetical leucine rich repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FPS8_ECTSI) HSP 1 Score: 1293 bits (3346), Expect = 0.000e+0 Identity = 1100/1219 (90.24%), Postives = 1129/1219 (92.62%), Query Frame = 2
Query: 35 VLDKLRKGKKQSRTPKVPFTLAPVDYGALAALYRLTQGDGWTRRDGWCTPVELQEWFGVDVNEQGRVVKLDLRGNNLQGTIPAGLGTLEFLEHLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYLRGGPKLGESISSWRTRLRKQQQQVVTSTPQPEVPPPMASPDRDALVALFHATGGDTWTRKSNWCTSAKLGTWVGVKVNQQGRVVELDLSDNNLRGAIPVELGKLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNLLAEESAESGSLDRSEAKRDGPRVESPVPEITLVPCAASTDRDALVALFISTNGANWTCNDNWDTDAELGTWHGVDVNERGRVVKLQLGLHNLRGPIPGALVALDELEVLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNSSITGGPEHGDLDSWRARIQPQQQRETEHDEPKEEADVAQHSPRSQDSETVETDIVHPGPSAPAEEERDPGHSFGEQVASFAGLAALTKGDREALDEIKQLIRSPPIRAPPADVFSPAPEPIDEEKLRDLNRLAEMATTLGEIASSHMEDQWMQEREQGLSQAHKAYFNAVRDGVCNAFLASSVVGSNLVGTSKTGGIGTAGKALKLLSAWVPMVGGLGGIAAAALKTGDRYIQTRRVVKIADIARDAVECCSLARRLAXXXXXXXXXXXXXXXXXXXXXXXXXXXGWSQGEYALPDGARERDVMEWFADEVANFEPQDHHATRTTSEEQAGRRLGKKHLQTLLLAVGNGCLEGANNVEEKVELLVRTVFPEDERNAVSTPQAPDVFKEQVASSTDSVLKQTDSAASLLVGRDSVESDASSVAALRGELRSLRVSLEDSNAKHSKLESVVSDLKKQVKSPPDSDGLVSIGGGQALMQRVIVTKKPETFLEESQREAVAVDQHVPMREWIEYKERQAEINRGNDARMDDIEVNVDRKQDRKRGSALSSRRGKG 3691
VLDK K KK RTPKVPFTLAPVDYGAL ALYRLTQGDGWTRRDGWCTPVELQEWFGV+VNEQGRVVKLDLRGNNLQGTIPAGLGTL+ LEH XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX LRGGPKLGESISSWRTRLR QQQ VVT+TPQPEVPPPMASPDRDALVALFHATGGD WTRKSNWCTSAKLGTW GVKVN++GRVVELDLSDNNLRG IPVELGKL XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX LLAEES ES SLDRSEAKRDGPRVES PEITLVPCAASTDRDALVALFISTNGA WTCNDNWDTDAELGTWHGVDVNERGRVVKLQLGLHNLRGPIP ALVALDELEVLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX SSITGGPEHGDLDSWRARIQPQQQRE EHD+PKEEADVAQHS RSQD+ETVETDIVHPGPS PAEEERDPGHSFGEQVASFAGLAALTKGD EALDEIKQLIR+PPIRAPPAD SPAPEPIDEEKLRDLNRLAEMATTL EIASSHMEDQWMQEREQGLSQA KAYFNAVRDGVCNAFLASSVVGSNLV TSKTGGIGTAGKALKLLSA VPMVGGLGGIA+AALKTGDRYIQTRRVVKIADIARDAVECCSLARRLAXXXXXXXXXXXXXXXXXXXXXXXX GWSQGEYALPDGAR+RDVMEWFADEVAN EPQDHHATRTT EEQAGRRLGKKHLQTLLLAVGNG LEGA ++EEKVELLVRTV PEDE NAVSTPQAPDV EQV SSTDSVL+QTDSAASLL+GRDSVESD SSVAAL GE++SLRVSL+DSNAK SKLE+ VS LK++VKS PDSDG+VSIGGGQALMQRV+VTKKPETFLEESQ EAVA DQ+VP+ EWIEYKERQAEI+RG+ ++D +EV VDRKQDRKRGS LSSRRGKG
Sbjct: 4 VLDKFWKAKK--RTPKVPFTLAPVDYGALTALYRLTQGDGWTRRDGWCTPVELQEWFGVEVNEQGRVVKLDLRGNNLQGTIPAGLGTLDALEHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLRGGPKLGESISSWRTRLRNQQQVVVTATPQPEVPPPMASPDRDALVALFHATGGDNWTRKSNWCTSAKLGTWKGVKVNEEGRVVELDLSDNNLRGTIPVELGKLGALRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX------------------------LLAEESVESESLDRSEAKRDGPRVESLAPEITLVPCAASTDRDALVALFISTNGATWTCNDNWDTDAELGTWHGVDVNERGRVVKLQLGLHNLRGPIPEALVALDELEVLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMLDGCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSSITGGPEHGDLDSWRARIQPQQQREAEHDDPKEEADVAQHSLRSQDAETVETDIVHPGPSCPAEEERDPGHSFGEQVASFAGLAALTKGDCEALDEIKQLIRAPPIRAPPADGVSPAPEPIDEEKLRDLNRLAEMATTLSEIASSHMEDQWMQEREQGLSQARKAYFNAVRDGVCNAFLASSVVGSNLVATSKTGGIGTAGKALKLLSAAVPMVGGLGGIASAALKTGDRYIQTRRVVKIADIARDAVECCSLARRLAXXXXXXXXXXXXXXXXXXXXXXXXGGGGWSQGEYALPDGARDRDVMEWFADEVANLEPQDHHATRTTPEEQAGRRLGKKHLQTLLLAVGNGRLEGAKSIEEKVELLVRTVLPEDEGNAVSTPQAPDVVVEQVPSSTDSVLRQTDSAASLLIGRDSVESDVSSVAALMGEIQSLRVSLDDSNAKQSKLENEVSSLKEKVKSAPDSDGVVSIGGGQALMQRVVVTKKPETFLEESQHEAVAADQYVPIDEWIEYKERQAEIDRGHSDKIDGLEVKVDRKQDRKRGSVLSSRRGKG 1196
BLAST of mRNA_E-siliculosus-1a_F_contig1178.1147.1 vs. uniprot
Match: A0A6H5JBQ0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JBQ0_9PHAE) HSP 1 Score: 1137 bits (2941), Expect = 0.000e+0 Identity = 1070/1221 (87.63%), Postives = 1100/1221 (90.09%), Query Frame = 2
Query: 35 VLDKLRKGKKQSRTPKVPFTLAPVDYGALAALYRLTQGDGWTRRDGWCTPVELQEWFGVDVNEQGRVVKLDLRGNNLQGTIPAGLGTLEFLEHLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYLRGG-PKLGESISSWRTRLRKQQQQVVTSTPQPEVPPPMASPDRDALVALFHATGGDTWTRKSNWCTSAKLGTWVGVKVNQQGRVVELDLSDNNLRGAIPVELGKLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNLLAEESAESGSLDRSEAKRDGPRVESPVPEITLVPCAASTDRDALVALFISTNGANWTCNDNWDTDAELGTWHGVDVNERGRVVKLQLGLHNLRGPIPGALVALDELEVLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNSSITGGPEHGDLDSWRARIQPQQQRETEHDEPKEEADVAQHSPRSQDSE-TVETDIVHPGPSAPAEEERDPGHSFGEQVASFAGLAALTKGDREALDEIKQLIRSPPIRAPPADVFSPAPEPIDEEKLRDLNRLAEMATTLGEIASSHMEDQWMQEREQGLSQAHKAYFNAVRDGVCNAFLASSVVGSNLVGTSKTGGIGTAGKALKLLSAWVPMVGGLGGIAAAALKTGDRYIQTRRVVKIADIARDAVECCSLARRLAXXXXXXXXXXXXXXXXXXXXXXXXXXXGWSQGEYALPDGARERDVMEWFADEVANFEPQDHHATRTTSEEQAGRRLGKKHLQTLLLAVGNGCLEGANNVEEKVELLVRTVFPEDERNAVSTPQAPDVFKEQVASSTDSVLKQTDSAASLLVGRDSVESDASSVAALRGELRSLRVSLEDSNAKHSKLESVVSDLKKQVKSPPDSDGLVSIGGGQALMQRVIVTKKPETFLEESQREAVAVDQHVPMREWIEYKERQAEINRGNDARMDDIEVNVDRKQDRKRGSALSSRRGKG 3691
VLDK RK K +RTPKVPFTLAP DYGALAALY LTQGDGW RDGWCTPV+LQEWFGVDVNEQGRVVKLDLRGNNLQGTIP LGTL+ LEHLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX GG PKLGESISSWR RLRKQQQ VVT QPEVPPPMASPDRDALVALFHATGGD WTRKSNWCT+A+LGTW GV+VNQQGRVVELDLSDNNLRGAIP ELGKL XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX NLLAEESAE+ SLDRSEAKRDGPRVESPV E+TLV CAASTDRDALVALFISTNGANWTCNDNWDTDAELGTWHGVDVNERGRVVKLQLGLHNLRGPIP ALVALDELEVLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNSSITGG EHG+LDSWRARIQPQQQRE EHDEPKEEADVAQHSPRSQD E TV ERDPG SF EQVASFAGLAALTKGDREALDEIKQLIR PPIRAP AD SPAPEPIDE LRDLNRLAEMATTLGEIASSHMEDQWMQ REQGLSQA KAYFNAVRDGVCNAFLASSVVGSNLV TSKTGGIGTAGKAL LLSA VPMVGGLGGIAA ALKTGDRYIQTRRV KIADIARDAVECCSLARRLAXXXXXXXXXXXXXXXXXXXXXXXXXXXGW QGEYALPDGA E+DVMEWFADEV+NFEPQ HATR T EEQAG RLGKKHLQTLLLAVG GCLEGANN+EEKVELLVRTVFPEDE NAVSTP+AP+V EQV S DSVLK TDS AS LVGRDS E DAS++AAL E+RSL VSL+D NAKHS LE+ VS + ++VKS PDSDG++SIG GQAL QRV K PE FLE S+ EAVA+DQ V W E RQAEINRG+D R+D +E V RKQD+KRG ALS RRGKG
Sbjct: 4 VLDKFRKVTKTTRTPKVPFTLAPRDYGALAALYHLTQGDGWIHRDGWCTPVDLQEWFGVDVNEQGRVVKLDLRGNNLQGTIPTVLGTLDALEHLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGGPKLGESISSWRLRLRKQQQ-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-DKTPEKFLEASEHEAVALDQPVLAHVWRESMVRQAEINRGHDDRIDRLEGKVARKQDQKRGIALSFRRGKG 1222
BLAST of mRNA_E-siliculosus-1a_F_contig1178.1147.1 vs. uniprot
Match: D7FUA2_ECTSI (Leucine rich repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUA2_ECTSI) HSP 1 Score: 284 bits (727), Expect = 5.050e-76 Identity = 224/594 (37.71%), Postives = 305/594 (51.35%), Query Frame = 2
Query: 2045 TGGPEHGD-LDSWRARIQPQQQRETEHDEPKEEADVAQHSPRSQDSETVETDIVHPGPSAPAEEERDPGHSFGEQVASFAGLAALTKGDREALDEIKQLIRSPPIRAPPADVFSPAPEPIDEEKLRDLNRLAEMATTLGEIASSHMEDQWMQEREQGLSQAHKAYFNAVRDGVCNAFLASSVVGSNLVGTSKTGGIGTAGKALKLLSAWVPMVGGLGGIAAAALKTGDRYIQTRRVVKIADIARDAVECCSLARRLAXXXXXXXXXXXXXXXXXXXXXXXXXXXG---------WSQGEYALPDGARERDVMEWFADEVANFEPQDHHATRTTSEEQAGRRLGKKHLQTLLLAVGNGCLEGANNVEEKVELLVRTVFPEDERNAVSTPQAPDVFKEQVASSTDSVLKQTDSAASLLVGRDSVESDASSVAALRGELRSLRVSLEDSNAKHSKLESVVSD------------------------------------------LKKQVKSP-PDSDGLVSIGGGQALMQRVIVTKKP-ETFLEESQREAVAVDQHV----PMREWIEY-KE---RQAEINRGNDARMDDIEVNVDR 3640
TGGP G+ LDSWRAR++ Q+Q D K E A+ S +Q + +TD P + + E D H Q++SF+ L+ L G + L++++QL+ + I FSP + L +LNRL MA LG++ S H+ ++ +Q RE L KAY+ A+R G+CNA+LA+SVV S+LV TSKTG +GTAGK L+ LS+ VP+V GL G+AAAALK GDRY+QTRRV KI DIA D+ +CC LAR LA G WSQ A PD A E VM+WF +EVA++EP + A +TT+ QAGR+LGK+HLQTLL AVG CL G N +EKV++LV + PE ER ST ASS +Q+ +AA+ D VAAL + S+R+ E A H +L++ + L K+V P PDSD LV+ GGG AL QR VT+ + FLE +Q A A V + E +E KE + E++R +DA++ + VDR
Sbjct: 340 TGGPTRGESLDSWRARLRQQEQAAVRED-TKAENPAARTSSSTQGDKPGKTDRATTEPISGSSREADMDHMTQAQISSFSALSTLCGGSHKRLEQVRQLVEALDINR-----FSPGTGLSETGTLGELNRLVAMAEDLGDMVSRHVMNEDIQRRELALPPGPKAYYTAIRTGLCNAYLAASVVCSSLVCTSKTGRMGTAGKTLEFLSSAVPVVSGLAGLAAAALKAGDRYLQTRRVSKICDIAPDSTDCCLLARTLALQLSDGYVDGTLPTTDTAEERGSHATAGMGGVEGGCGWSQDIGASPDSATEEAVMDWFVEEVADYEPNNVDARKTTAAVQAGRKLGKRHLQTLLKAVGRDCLRGTNTPDEKVKVLVGIILPEAERRVGSTSHVTRERTNHDASSAQPASRQSHAAATRPAVPDGAAKSDIDVAALMERVASMRMRTE---ATHEELKAGLEASHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXILNKKVMKPGPDSDSLVASGGGLALKQRQAVTETALDDFLERAQERAPAAGNDVVTLGQLAEAVELLKEVHSKNDELHREHDAKLTRFQGAVDR 924
BLAST of mRNA_E-siliculosus-1a_F_contig1178.1147.1 vs. uniprot
Match: D7FUA0_ECTSI (Leucine Rich Repeat Protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUA0_ECTSI) HSP 1 Score: 269 bits (688), Expect = 5.110e-70 Identity = 207/563 (36.77%), Postives = 282/563 (50.09%), Query Frame = 2
Query: 2069 LDSWRARIQPQQQRETEHDEPKEEADVAQHSPRSQDSETVETDIVHPGPSAPAEEERDPGHSFGEQVASFAGLAALTKGDREALDEIKQLIRSPPI-RAPPADVFSPAPEPIDEEKLRDLNRLAEMATTLGEIASSHMEDQWMQEREQGLSQAHKAYFNAVRDGVCNAFLASSVVGSNLVGTSKTGGIGTAGKALKLLSAWVPMVGGLGGIAAAALKTGDRYIQTRRVVKIADIARDAVECCSLARRLAXXXXXXXXXXXXXXXXXXXXXXXXXXXG---------WSQGEYALPDGARERDVMEWFADEVANFEPQDHHATRTTSEEQAGRRLGKKHLQTLLLAVGNGCLEGANNVEEKVELLVRTVFPEDERNAVSTPQAPDVFKEQVASSTDSVLKQTDSAASLLVGRDSVESDASSVAALRGELRSLRVSLEDSN----------------------------------------------AKHSKLESV--------------VSDLKKQVKSP-PDSDGLVSIGGGQALMQRVIVTKKPETFLEESQREAVAVDQHV 3544
LDSWRAR++ QQ++ E ++ K E A+ S +Q + + D GP + + E D Q++SF+ L+ L G ++L++++QL+ + I R+ P S + L ++NRL MA LG + S H+ ++ +Q RE L KAY+ A+R G+CNA+LA+SVV S+LV TSKTG +G AGK L+ LS+ VP+V GL G+AAAALK GDRY+QTRRV KI DIA D+ +CC LAR LA G WSQ A PD A E VM+WF +EVA++EP + A +TT QAGR+LG +HLQTLL AVG CL G N +EKV++LV + PE ER ST ASS +Q+ +AA+ D VAAL + S+R+ E ++ A++++L V V L K V P PDSD LV GGGQAL QR VT++ + FLE SQ A A V
Sbjct: 561 LDSWRARLR-QQEQAAEREDTKAENPAARTSSSTQGDKPGKPDRATTGPISGSSREADMDDMTQAQISSFSALSTLCGGRHKSLEQVRQLVEALGINRSSPGTGLS------ETGTLGEVNRLVAMAEDLGGMVSRHVMNEDIQRRELALPPGPKAYYTAIRTGLCNAYLAASVVCSSLVCTSKTGRMGAAGKTLEFLSSAVPVVSGLAGLAAAALKAGDRYLQTRRVSKICDIAPDSTDCCLLARTLALQLSDGYVDGTLPTTDTAEERGTHTTAGMGGVEGGCGWSQDIGASPDSATEEAVMDWFVEEVADYEPNNLDARKTTPAVQAGRKLGTRHLQTLLKAVGRDCLRGTNTPDEKVKVLVGIILPEAERRVGSTSHGTRERLNHDASSAQPASRQSHAAATRPAVPDGAPKSDIDVAALMERMASMRIRTEATHEELKAGLEASHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEAENARLNDVXXXXXXXXXXXXXXVKILNKMVMKPGPDSDSLVPSGGGQALQQRQAVTERVDDFLERSQERAPAAGNDV 1116
BLAST of mRNA_E-siliculosus-1a_F_contig1178.1147.1 vs. uniprot
Match: D7FUA1_ECTSI (Putative Leucine Rich Repeat Protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUA1_ECTSI) HSP 1 Score: 258 bits (659), Expect = 3.030e-67 Identity = 214/593 (36.09%), Postives = 295/593 (49.75%), Query Frame = 2
Query: 2048 GGPEHGD-LDSWRARIQPQQQRETEHDEPKEEADVAQHSPRSQDSETVETDIVHPGPSAPAEEERDPGHSFGEQVASFAGLAALTKGDREALDEIKQLIRSPPIRAPPADVFSPAPEPIDEEKLRDLNRLAEMATTLGEIASSHMEDQWMQEREQGLSQAHKAYFNAVRDGVCNAFLASSVVGSNLVGTSKTGGIGTAGKALKLLSAWVPMVGGLGGIAAAALKTGDRYIQTRRVVKIADIARDAVECCSLARRLAXXXXXXXXXXXXXXXXXXXXXXXXXXXG---------WSQGEYALPDGARERDVMEWFADEVANFEPQDHHATRTTSEEQAGRRLGKKHLQTLLLAVGNGCLEGANNVEEKVELLVRTVFPEDERNAVSTPQAPDVFKEQVASSTDSVLKQTDSAASLLVGRDSVESDASSVAALRGELRSLRVSLEDSNAKHSKLESVVSD------------------------------------------LKKQVKSP-PDSDGLVSIGGGQALMQRVIVTKKP-ETFLEESQREAVAVDQHV----PMREWIEY-KE---RQAEINRGNDARMDDIEVNVDR 3640
GGP + LDSWRAR++ Q+Q D K E + S +Q + + D P + + E D H Q++SF+ L+ L G + +L+++ QL+ + I SP L +LNRL MA LG++ S H+ ++ +Q RE L KAY+ A+R G+CNA+LA+SVV S+LV TSKTG +GTAGK L+ LS+ VP+V GL G+AAAALK GDRY+QTRRV KI D+A D+ +CC LAR LA G WSQ A PD A E VM+WF +EVA++EP A +TT+ QAGR+LG +HLQTLL AVG CL G N +EKV++LV + PE ER ST ASS +Q+ +AA+ D + VAAL + S+R+ E A H +L++ + L K+V P PDSD LV+ AL QR VT+ + FLE +Q A A V + E +E KE + E++R +DA++ + VDR
Sbjct: 368 GGPAKDESLDSWRARLRQQEQAAVRED-TKAENPAVRTSSSTQGDKPGKPDGATTEPISGSSREADMDHITQAQISSFSSLSTLCGGSQASLEQVGQLVEALGINR-----SSPGTGLNGTGTLGELNRLVAMAEDLGDMVSRHVTNEDIQRRELALPPGPKAYYTAIRTGLCNAYLAASVVSSSLVCTSKTGRMGTAGKTLEFLSSAVPVVSGLAGLAAAALKAGDRYLQTRRVSKICDMAPDSTDCCLLARALALQLSDGYVDGTLPTIDTAEERGTHTTAGMGGVEGECGWSQDIGASPDSATEEAVMDWFVEEVADYEPNKLDARKTTAAVQAGRKLGTRHLQTLLKAVGRDCLRGTNTPDEKVKVLVGIILPEAERKVGSTSHGTQERTNHDASSAQPASRQSHAAATRPAAPDGAAKNDLDVAALMERMASMRIRTE---ATHEELKAGLEASHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKILNKKVMKPGPDSDSLVA----SALKQRQAVTETAVDDFLERAQERAPAAGNDVVTLGQLTEAVELLKEVHSKYDELHREHDAKLSRFQRAVDR 947
BLAST of mRNA_E-siliculosus-1a_F_contig1178.1147.1 vs. uniprot
Match: D7G1L2_ECTSI (Hypothetical leucine rich repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1L2_ECTSI) HSP 1 Score: 213 bits (542), Expect = 2.200e-54 Identity = 171/507 (33.73%), Postives = 253/507 (49.90%), Query Frame = 2
Query: 2264 QVASFAGLAALTKGDREALDEIKQLIRSPPIRAPPADVFSPAPEPIDEEKLRDLNRLAEMATTLGEIASSHMEDQWMQEREQGLSQAHKAYFNAVRDGVCNAFLASSVVGSNLVGTSKTGGIGTAGKALKLLSAWVPMVGGLGGIAAAALKTGDRYIQTRRVVKIADIARDAVECCSLARRLAXXXXXXXXXXXXXXXXXXXXXXXXXXXGWS---QGEYALPDGARERDVMEWFADEVANFEPQDHHATRTTSEEQAGRRLGKKHLQTLLLAVGNGCLEGANNVEEKVELLVRTVFPEDERNAVSTPQAPDVFKEQVASSTDSVLKQTDSAASLLVGRDSVESDASSVAALRGELRSLRVSLEDSNAKHSKLESVVSD----------------------------LKKQVK----------SPPDSDGLVSIGGGQALMQRVIVTKKPETFLEESQ-REAVAVDQH-VPMREWIEYKERQAEINRGNDARMDDIEVNVDRKQDRK 3655
Q +S AGL L + + EAL++I+++I + +R+ P E D + R+L L M+T LGE+A H ED ++ +E L K Y++AVR G+C A+LA+SV+ SN V TSKTGG+G G ALKL+S VP++GGL +A AL+ GD Y+QTRR+VKI +A D VECCSLARRLA G S +G +P E DV ++ +EV +E DH G+RLGKKHL+ LL A+ GCL+G+N +K+++L+ + PE + +TP P KE + S + DS L R + + +AAL+ + LE+ +ESV L+++VK S PD D V GG AL +RV V++ + FL+ ++ R A A D H V + E E++ Q E +R ++AR+ ++E + + RK
Sbjct: 168 QFSSSAGLGPLIRENPEALEDIQRVIEATTVRS-----IHPDDELSDIQSRRNLGTLVTMSTALGEVALKHTEDMSVRRKELALPPFSKEYYSAVRSGLCQAYLAASVIDSNWVSTSKTGGMGKVGAALKLMSGAVPLIGGLPKLAGKALEAGDTYLQTRRLVKITAMAPDTVECCSLARRLALQLTDGLRNNASATDDDNNQVWVNTTAGGSGCGRGADMMPGDMSEEDVFKYLLEEVTAYERNDH----------GGKRLGKKHLRKLLKAIQGGCLDGSNGTVQKIKILLLEILPEADDKPAATPGTP---KEVMVRSPPAGAAAHDSG---LPSRAEFAAIQAELAALKSAKDKQQAELEEXXXXXVAVESVXXXXXXXXEALKSGRRXXXXXXXXXXXXXXXLERKVKKLEEHVPELDSEPDDD--VDFGGELALRRRVAVSETAKGFLDRARDRAARAADHHPVTVSEQREFEALQNEKHREHEARLRELEGQISKATIRK 651
BLAST of mRNA_E-siliculosus-1a_F_contig1178.1147.1 vs. uniprot
Match: D7FHA3_ECTSI (Hypothetical leucine rich repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHA3_ECTSI) HSP 1 Score: 210 bits (534), Expect = 3.490e-52 Identity = 197/607 (32.45%), Postives = 285/607 (46.95%), Query Frame = 2
Query: 2042 ITGGPEHGD-LDSWRARIQ-------------------------------PQQQRETEHDEPKEEADVAQHSPRSQDSETVETDIVHPG-PSAPAEEERDPGHSFGEQVASFAGLAALTKGDREALDEIKQLIRSPPIRAPPADVFSPAPEPIDEEKLRDLNRLAEMATTLGEIASSHMEDQWMQEREQGLSQAHKAYFNAVRDGVCNAFLASSVVGSNLVGTSKTGGIGTAGKALKLLSAWVPMVGGLGGIAAAALKTGDRYIQTRRVVKIADIARDAVECCSLARRLAXXXXXXXXXXXXXXXXXXXXXXXXXXXGWS---QGEYALPDGARERDVMEWFADEVANFEPQDHHATRTTSEEQAGRRLGKKHLQTLLLAVGNGCLEGANNVEEKVELLVRTVFPEDERNAVSTPQAPDVFKEQVASSTDSVLKQTDSAASLLVGRDSVESDASSVAALRGELRSLRVSLEDSNAKHSKLESVVS----------------------------DLKKQVK----------SPPDSDGLVSIGGGQALMQRVIVTKKPETFLEESQ-REAVAVDQH-VPMREWIEYKERQAEINRGNDARMDDIEVNV 3634
+TGGP G+ LDSWR R++ PQQQ+ DE +E+A V SP +Q E V G S E+ + F Q+ S AGL +L + + AL+ I+ I A F P E D + R+L L M+T LGE+A H ED +Q +E L KAY+ A+R G+C A+LA+S + S+ V TSKTGG+G G ALKL+S+ VP++GGL +A AL+ GD Y+QTRR+VKI +A D VECCSLARRLA G S +G +P E DV ++ +EV E DH G+RLGK+HL+ LL A+ GCL+G+N +K+++L+ + PE + +TP P KE + S + DS L R + + +AAL+ + LE+ +ESV +L+++VK S PD D V GG AL +RV V++ + FL+ ++ R A AVD H V + E E++ Q E +R ++AR+ ++E +
Sbjct: 257 LTGGPRDGEGLDSWRTRVRFEQRTKPRTLKGDQRGKDAPVPPPXAPTVLLPQQQQIDAGDETEEDAPVLLDSP-NQRQEVVAGSANSTGRASTSPEKAEEVDRLFRAQLVSSAGLDSLIRENPAALENIQLAIERQV-----AGSFYPDNELGDMQSRRNLGTLVTMSTALGEVALRHTEDMNVQRKELALPPFSKAYYTAIRTGLCKAYLAASAIDSDWVITSKTGGMGKVGAALKLMSSAVPLIGGLPKLAGKALEAGDTYLQTRRLVKITAMAPDTVECCSLARRLALQLTDGLRNNASATDDDNNQVWVNTTAGGSGCGRGADMMPGDMSEEDVFKYLLEEVTADERNDH----------GGKRLGKRHLRKLLKAIQGGCLDGSNGTVQKIKILLLEILPEADDKPAATPGTP---KEVMVRSPPAGAAAHDSG---LPSRAEFAAIQAELAALKSAKDKQQAELEEXXXXXVAVESVXXXXXXXXEALKSGRRXXXXXXXXXXXXXXELERKVKKLEQHVPELDSEPDDD--VDFGGELALRRRVAVSETAKGFLDRARDRAARAVDHHPVTVSEQREFEALQDEKHREHEARLRELEGQI 839
BLAST of mRNA_E-siliculosus-1a_F_contig1178.1147.1 vs. uniprot
Match: D7FH89_ECTSI (Putative Leucine Rich Repeat Protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FH89_ECTSI) HSP 1 Score: 211 bits (536), Expect = 1.450e-51 Identity = 133/317 (41.96%), Postives = 183/317 (57.73%), Query Frame = 2
Query: 2255 FGEQVASFAGLAALTKGDREALDEIKQLIRSPPIRAPPADVFSPAPEPIDEEKLRDLNRLAEMATTLGEIASSHMEDQWMQEREQGLSQAHKAYFNAVRDGVCNAFLASSVVGSNLVGTSKTGGIGTAGKALKLLSAWVPMVGGLGGIAAAALKTGDRYIQTRRVVKIADIARDAVECCSLARRLAXXXXXXXXXXXXXXXXXXXXXXXXXXXGWSQGEYA------LPDGARERDVMEWFADEVANFEPQDHHATRTTSEEQAGRRLGKKHLQTLLLAVGNGCLEGANNVEEKVELLVRTVFPEDERNAVSTPQAP 3187
F Q++S AGL +L K + EAL++I+++I+ AP A F E D E+ R L L MA LGE+A SH ED+ +Q +E L+ KAY+ AVR G+CNA+LA+SV+ S+ V TSKTGG+G G AL LLS+ VP++ GL G+A AL+TGD Y+QTRR+ KI +A D +ECCSLARRLA G + G + LPD E DV E +EVA +E DH G+RLGKKHL+ LL A+ GCL+G++ +++K+ELL+ + PE + T +P
Sbjct: 477 FRVQLSSSAGLDSLIKENPEALEDIQRVIK-----APAAGGFYFDDELSDMERRRKLGALMNMAKALGEVALSHTEDKDVQRKELALAPFSKAYYTAVRSGLCNAYLAASVIDSDWVSTSKTGGMGKGGTALVLLSSAVPVISGLAGLAGKALRTGDHYLQTRRLAKITAMAADTMECCSLARRLALQLTDGLKDDTGMMDDETDQVCTHTTAGMNGGSGSGRDADILPDIIIEDDVFEHLLEEVARYERSDH----------GGKRLGKKHLRKLLKAIQRGCLDGSSGIKQKMELLLLEILPEADIRTSETSISP 778
BLAST of mRNA_E-siliculosus-1a_F_contig1178.1147.1 vs. uniprot
Match: D7FH90_ECTSI (Putative Leucine Rich Repeat Protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FH90_ECTSI) HSP 1 Score: 207 bits (528), Expect = 1.910e-51 Identity = 152/416 (36.54%), Postives = 220/416 (52.88%), Query Frame = 2
Query: 2036 SSITGGPEHGD-LDSWRARIQPQQQRETEH---DEPKEEADVAQHS------PRSQDS-ETVETDIVHPGP---------------SAPAEEERDPGHS------FGEQVASFAGLAALTKGDREALDEIKQLIRSPPIRAPPADVFSPAPEPIDEEKLRDLNRLAEMATTLGEIASSHMEDQWMQEREQGLSQAHKAYFNAVRDGVCNAFLASSVVGSNLVGTSKTGGIGTAGKALKLLSAWVPMVGGLGGIAAAALKTGDRYIQTRRVVKIADIARDAVECCSLARRLAXXXXXXXXXXXXXXXXXXXXXXXXXXXGWSQGEYALPDGARERDVMEWFADEVANFEPQDHHATRTTSEEQAGRRLGKKHLQTLLLAVGNGCLEGANNVEEKVELLVRTVFPEDERNAVSTPQAP 3187
+ +TGGP G+ LDSWRARI+P+Q+ + + DE +E+A P+ Q++ E + +P P +P PG + F Q++S AGL +L + +AL++I+++I S A SP + D + R L L M+T LGE+A H ED +Q +E L AY++AVR G+C A+LA+SV+ S+ V TSKTGG+G AG A+KL+S+ VP+VGGL +A AL+ GD Y+QTRR+VKI +A DAV+CC LARRLA G + G P E DV E+ +EVA+++ DH G RLGKKHL+ LL A+ G L+G+N E+K+E+LV + PE + + +T P
Sbjct: 305 NKLTGGPAKGEGLDSWRARIRPKQETKPQTLKGDEKEEDAPXXXXXXXXVLLPQQQETGEXXXNEKDNPVPLGFPNQREEAVWERARSPERASLSPGKAEEMDRLFSAQLSSSAGLDSLIREKPKALEDIQRVIESTV-----AGSVSPDDKLSDIDGRRKLGTLVTMSTALGEVALRHTEDMNIQRKELALPAFSNAYYSAVRSGLCQAYLAASVIDSDWVSTSKTGGMGKAGAAMKLMSSAVPVVGGLPELAGKALEAGDHYLQTRRLVKITAMASDAVDCCFLARRLALQLTDGLRNDAGATADNADEVRVDTTAGMNGGADMTPGDMSEEDVFEYLLEEVASYKRNDH----------GGVRLGKKHLRKLLKAIQRGSLDGSNGTEQKIEVLVLKILPEADTSLAATLSTP 705
BLAST of mRNA_E-siliculosus-1a_F_contig1178.1147.1 vs. uniprot
Match: A0A6H5KZF6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KZF6_9PHAE) HSP 1 Score: 199 bits (507), Expect = 5.340e-48 Identity = 126/317 (39.75%), Postives = 175/317 (55.21%), Query Frame = 2
Query: 2255 FGEQVASFAGLAALTKGDREALDEIKQLIRSPPIRAPPADVFSPAPEPIDEEKLRDLNRLAEMATTLGEIASSHMEDQWMQEREQGLSQAHKAYFNAVRDGVCNAFLASSVVGSNLVGTSKTGGIGTAGKALKLLSAWVPMVGGLGGIAAAALKTGDRYIQTRRVVKIADIARDAVECCSLARRLAXXXXXXXXXXXXXXXXXXXXXXXXXXXGWSQGEYA------LPDGARERDVMEWFADEVANFEPQDHHATRTTSEEQAGRRLGKKHLQTLLLAVGNGCLEGANNVEEKVELLVRTVFPEDERNAVSTPQAP 3187
F Q++S AG +L + + EAL++I ++I+ AP A E D E+ R L L MA LGE+A SH ED +Q +E L+ KAY+ AVR G+CNA+LA+SV+ S+ V T KTGG+G G AL LLS+ VP++ GL G+A AL+TGD +QTRR+VKI +A D +ECCSLARRLA G + G + PD E DV E+ +EVA +E DH G+RLGKKHL+ LL A+ GCL+G++ +++K+E L+ + P + T P
Sbjct: 437 FRVQLSSSAGFDSLIRENPEALEDIHRVIK-----APAAGSLDFVDEISDMERRRKLGTLVNMAKALGEVALSHTEDMDVQRKELALTPFSKAYYTAVRSGLCNAYLAASVIDSDWVSTCKTGGMGKGGTALVLLSSAVPVISGLAGLAGKALRTGDHCLQTRRLVKITAMAADTMECCSLARRLALQLTDGLKDDTGMMDDEADQVYTHITAGMNGGSGSGRDADISPDDMIEDDVFEYLLEEVARYERSDH----------GGKRLGKKHLRKLLKAIQRGCLDGSSGIKQKMEALLLEILPGADIRTSETSSTP 738 The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig1178.1147.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-siliculosus-1a_F_contig1178.1147.1 >prot_E-siliculosus-1a_F_contig1178.1147.1 ID=prot_E-siliculosus-1a_F_contig1178.1147.1|Name=mRNA_E-siliculosus-1a_F_contig1178.1147.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=1221bp MVLDKLRKGKKQSRTPKVPFTLAPVDYGALAALYRLTQGDGWTRRDGWCTback to top mRNA from alignment at E-siliculosus-1a_F_contig1178:8294..33954+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-siliculosus-1a_F_contig1178.1147.1 ID=mRNA_E-siliculosus-1a_F_contig1178.1147.1|Name=mRNA_E-siliculosus-1a_F_contig1178.1147.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=25661bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1178:8294..33954+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top Coding sequence (CDS) from alignment at E-siliculosus-1a_F_contig1178:8294..33954+ >mRNA_E-siliculosus-1a_F_contig1178.1147.1 ID=mRNA_E-siliculosus-1a_F_contig1178.1147.1|Name=mRNA_E-siliculosus-1a_F_contig1178.1147.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=7326bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1178:8294..33954+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top |