mRNA_E-siliculosus-1a_F_contig1176.1141.1 (mRNA) Ectocarpus siliculosus Ec863f_EcPH12_90f female
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Overview
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig1176.1141.1 vs. uniprot
Match: D7FV66_ECTSI (Postmeiotic segregation increased 2 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FV66_ECTSI) HSP 1 Score: 961 bits (2484), Expect = 0.000e+0 Identity = 519/546 (95.05%), Postives = 525/546 (96.15%), Query Frame = 2
Query: 2 EAEVLDCLKTALHKQWESSRYTIPVNQGQLVQARLTDGAAFTLRDTTTAXXXXXXEARGGASSVGVVSPGPLEDHVAAEEASVGKGEVEPVSGGSSKSQGTKGRVEVVETRRESGGGAIDSRESEGMKRERRTKGAEDRKRRARDFDAPAGAMRSLDPVRSEGGDRQRSTSPSNPKRHRGVVAESDEGVGEGRANGKAAASVDGDKAGSSVQETQGGNATPAKDHGDVDRGSRQRSPEGTQGPKEGPPERDSSVRGGHSPAPAEGGKTPGARRETSSGAACQPLAYDMRSILGGCRRASRLTRKRNARNASADSFSAKLSGCGAKDRDSQAAARAFSRVLQKEHFNQMRVVGQFNLGFMICLLGSDLFILDQHACDEKYNFEVLQQTTTIHQQPLVRPLPLETSASEEMTIIDNIALFERNGFRFTVDDDQPTTKKLKITAIPFSKGTQFGVDDVHELASIVADNTNPGEMVRLPKARAMFASRACRSSFMIGKALDKGQMARVVAKMATIEQPWNCPHGRPTMRHLADVSASLRTAAGLEPLLTA 1639
EAEVLDCLKTALHKQWESSRYTIPVNQGQLVQARLTDGAAFTLRDT A XXXXXEARGGASSVGVVSPGPLEDHVAAEEAS GK E+E VSG SK+QGTK RVEVVETRRESGGGA D RESEGMKRERRTK AEDRKRR RDFDAPAGAMRSLDPVRSEGGDRQRSTSPSNPKRHRGVVAESD+GVGEGRA+GKAAASVDGDKAGSSVQ+TQGGNATPAKDHGDVD GSRQRSPEGT GPKE PPERDSSVR GH PA AEGGKTPGARRETSSGAACQPLAYDMRSILGGCRRASRLTRKRNARNASADSFSAKLSGCGAKDRDSQAAARAFSRVL KEHF QMRVVGQFNLGFMICLLGSDLFILDQHACDEKYNFEVLQQTTTIHQQPLVRPLPLETSASEEMTIIDNIALFERNGFRFT+DDDQPTTKKLKITAIPFSKGTQFGVDDVHELASIVADNTNPGEMVRLPKARAMFASRACRSSFMIGKALDKGQMARVVAKMATIEQPWNCPHGRPTMRHLADVSASLRTAAGLEPLLTA
Sbjct: 362 EAEVLDCLKTALHKQWESSRYTIPVNQGQLVQARLTDGAAFTLRDTAAATXXXXXEARGGASSVGVVSPGPLEDHVAAEEASGGKDEMELVSGECSKNQGTKDRVEVVETRRESGGGATDWRESEGMKRERRTKSAEDRKRRTRDFDAPAGAMRSLDPVRSEGGDRQRSTSPSNPKRHRGVVAESDDGVGEGRASGKAAASVDGDKAGSSVQDTQGGNATPAKDHGDVDGGSRQRSPEGTLGPKEAPPERDSSVRVGHPPASAEGGKTPGARRETSSGAACQPLAYDMRSILGGCRRASRLTRKRNARNASADSFSAKLSGCGAKDRDSQAAARAFSRVLHKEHFTQMRVVGQFNLGFMICLLGSDLFILDQHACDEKYNFEVLQQTTTIHQQPLVRPLPLETSASEEMTIIDNIALFERNGFRFTIDDDQPTTKKLKITAIPFSKGTQFGVDDVHELASIVADNTNPGEMVRLPKARAMFASRACRSSFMIGKALDKGQMARVVAKMATIEQPWNCPHGRPTMRHLADVSASLRTAAGLEPLLTA 907
BLAST of mRNA_E-siliculosus-1a_F_contig1176.1141.1 vs. uniprot
Match: I2CR37_NANGC (MutL_C domain-containing protein (Fragment) n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=I2CR37_NANGC) HSP 1 Score: 264 bits (674), Expect = 3.150e-80 Identity = 125/215 (58.14%), Postives = 162/215 (75.35%), Query Frame = 2
Query: 980 RDSQAAARAFSRVLQKEHFNQMRVVGQFNLGFMICLLGSDLFILDQHACDEKYNFEVLQQTTTIHQQPLVRPLPLETSASEEMTIIDNIALFERNGFRFTVDDDQPTTKKLKITAIPFSKGTQFGVDDVHELASIVADNT----------NPGEMVRLPKARAMFASRACRSSFMIGKALDKGQMARVVAKMATIEQPWNCPHGRPTMRHLADVS 1594
RD++AAAR FSRVL K H ++ V+GQFNLGF+I +G+D+FILDQHACDEKYNFE LQ TTT+H+Q L+ P PLE SA EE+ I++++ F+ NGF F +D + +++K+ ++P+SKG QFG+ D+HELAS++ D++ P VRLPK RAMFASRACR S MIGKAL + QM +VVA +A IEQPWNCPHGRPTMRHL D+S
Sbjct: 7 RDTEAAARVFSRVLTKSHLKRLVVLGQFNLGFIIARIGADVFILDQHACDEKYNFETLQSTTTLHEQRLIAPKPLELSAMEEVVILEHLPTFKANGFSFRLDPEAGPMERIKLLSLPYSKGIQFGLQDIHELASLLGDSSFCGGVEEGAEGPAPSVRLPKIRAMFASRACRMSIMIGKALTRSQMQKVVANLAEIEQPWNCPHGRPTMRHLVDLS 221
BLAST of mRNA_E-siliculosus-1a_F_contig1176.1141.1 vs. uniprot
Match: A0A485LCN4_9STRA (Aste57867_19480 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LCN4_9STRA) HSP 1 Score: 264 bits (674), Expect = 4.900e-74 Identity = 122/204 (59.80%), Postives = 160/204 (78.43%), Query Frame = 2
Query: 983 DSQAAARAFSRVLQKEHFNQMRVVGQFNLGFMICLLGSDLFILDQHACDEKYNFEVLQQTTTIHQQPLVRPLPLETSASEEMTIIDNIALFERNGFRFTVDDDQPTTKKLKITAIPFSKGTQFGVDDVHELASIVADNTNPGEMVRLPKARAMFASRACRSSFMIGKALDKGQMARVVAKMATIEQPWNCPHGRPTMRHLADVS 1594
D++ A A RVL K F++M V+GQFNLGF+I L SDLFI+DQHA DEK+ +E LQ+TT IHQQPLVRP+ +E +A EEMTI+D++A+F++ GF F VD+ P T+KLK+ ++PFSK TQ+GVDDV EL S++ +N +P +RLPK AMFASRACRS+ MIG AL K +M ++V ++A +EQPWNCPHGRPTMRHL D+S
Sbjct: 559 DAEEATAALQRVLSKADFSRMEVIGQFNLGFIIARLDSDLFIIDQHASDEKFRYETLQRTTVIHQQPLVRPMSMELTAVEEMTILDHLAIFKKQGFHFQVDEGAPVTQKLKLISLPFSKHTQWGVDDVRELVSLLLENPHPPSTIRLPKTLAMFASRACRSAVMIGTALKKEEMQKIVGQLADLEQPWNCPHGRPTMRHLVDLS 762
BLAST of mRNA_E-siliculosus-1a_F_contig1176.1141.1 vs. uniprot
Match: A0A833X1G2_PHYIN (MutL C terminal dimerization domain n=1 Tax=Phytophthora infestans TaxID=4787 RepID=A0A833X1G2_PHYIN) HSP 1 Score: 261 bits (668), Expect = 5.950e-73 Identity = 122/203 (60.10%), Postives = 158/203 (77.83%), Query Frame = 2
Query: 983 DSQAAARAFSRVLQKEHFNQMRVVGQFNLGFMICLLGSDLFILDQHACDEKYNFEVLQQTTTIHQQPLVRPLPLETSASEEMTIIDNIALFERNGFRFTVDDDQPTTKKLKITAIPFSKGTQFGVDDVHELASIVADNTNPGEMVRLPKARAMFASRACRSSFMIGKALDKGQMARVVAKMATIEQPWNCPHGRPTMRHLADV 1591
D++ AA A RVL+KE F +M+V+GQFNLGF+I LG+DLFI+DQHA DEK+N+E LQQTT +HQQPLVRPL LE +A EEM I+D++ +F +NGF F VD D P TKKLK+ ++PF+K TQFG +D+ ELAS++ D +RLPK AMFASRACRSS MIG AL K +M ++V ++ ++QPWNCPHGRPT+RHL D+
Sbjct: 586 DNEVAAAALQRVLKKEDFKRMQVLGQFNLGFIIGKLGNDLFIIDQHASDEKFNYETLQQTTVMHQQPLVRPLRLELTAGEEMVILDHLGVFTKNGFTFLVDKDAPATKKLKLLSLPFTKHTQFGTEDIRELASLLMDAPMNTSTIRLPKVMAMFASRACRSSIMIGTALHKEEMQKIVRNLSGLDQPWNCPHGRPTLRHLVDL 788
BLAST of mRNA_E-siliculosus-1a_F_contig1176.1141.1 vs. uniprot
Match: A0A4D9CZ00_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CZ00_9STRA) HSP 1 Score: 265 bits (676), Expect = 7.360e-73 Identity = 126/215 (58.60%), Postives = 162/215 (75.35%), Query Frame = 2
Query: 980 RDSQAAARAFSRVLQKEHFNQMRVVGQFNLGFMICLLGSDLFILDQHACDEKYNFEVLQQTTTIHQQPLVRPLPLETSASEEMTIIDNIALFERNGFRFTVDDDQPTTKKLKITAIPFSKGTQFGVDDVHELASIVADNT----------NPGEMVRLPKARAMFASRACRSSFMIGKALDKGQMARVVAKMATIEQPWNCPHGRPTMRHLADVS 1594
RD++AAAR FSRVL K H ++ V+GQFNLGF+I +G+D+FILDQHACDEKYNFE LQ TTT+H+Q L+ P PLE SA EE+ I++++ F+ NGF F VD + +++K+ ++P+SKG QFG+ D+HELAS++ D++ P VRLPK RAMFASRACR S MIGKAL + QM +VVA +A IEQPWNCPHGRPTMRHL D+S
Sbjct: 780 RDTEAAARVFSRVLTKSHLKRLVVLGQFNLGFIIARIGADVFILDQHACDEKYNFETLQSTTTLHEQRLIAPKPLELSALEEVVILEHLPTFKANGFSFRVDPEAGPMERIKLLSLPYSKGIQFGLQDIHELASLLGDSSFCGGVEEGAEGPAPSVRLPKIRAMFASRACRMSIMIGKALTRSQMQKVVANLAEIEQPWNCPHGRPTMRHLVDLS 994
BLAST of mRNA_E-siliculosus-1a_F_contig1176.1141.1 vs. uniprot
Match: A0A0W8CYU8_PHYNI (Mismatch repair endonuclease pms1 n=21 Tax=Phytophthora TaxID=4783 RepID=A0A0W8CYU8_PHYNI) HSP 1 Score: 258 bits (660), Expect = 8.140e-72 Identity = 122/203 (60.10%), Postives = 157/203 (77.34%), Query Frame = 2
Query: 983 DSQAAARAFSRVLQKEHFNQMRVVGQFNLGFMICLLGSDLFILDQHACDEKYNFEVLQQTTTIHQQPLVRPLPLETSASEEMTIIDNIALFERNGFRFTVDDDQPTTKKLKITAIPFSKGTQFGVDDVHELASIVADNTNPGEMVRLPKARAMFASRACRSSFMIGKALDKGQMARVVAKMATIEQPWNCPHGRPTMRHLADV 1591
D++ AA A RVL+KE F +M V+GQFNLGF+I L +DLFI+DQHA DEK+N+E LQQTT +HQQPLVRPL LE +A EEM I+D++A+F +NGF F VD D P TKKLK+ ++PF+K TQFG +D+ ELAS++ D +RLPK AMFASRACRSS MIG AL K +M ++V ++ ++QPWNCPHGRPT+RHL D+
Sbjct: 587 DNELAAAALQRVLKKEDFKRMEVLGQFNLGFIIGKLDNDLFIIDQHASDEKFNYETLQQTTVMHQQPLVRPLMLELTAGEEMIILDHLAVFAKNGFTFLVDKDAPATKKLKLLSLPFTKHTQFGTEDIRELASLLMDAPLNPATIRLPKVMAMFASRACRSSIMIGTALHKEEMQKIVRNLSGLDQPWNCPHGRPTLRHLVDL 789
BLAST of mRNA_E-siliculosus-1a_F_contig1176.1141.1 vs. uniprot
Match: A0A024UUQ3_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024UUQ3_9STRA) HSP 1 Score: 259 bits (661), Expect = 9.530e-72 Identity = 123/214 (57.48%), Postives = 161/214 (75.23%), Query Frame = 2
Query: 977 DRDSQAAARAFSRVLQKEHFNQMRVVGQFNLGFMICLLGSDLFILDQHACDEKYNFEVLQQTTTIHQQPLVRPLPLETSASEEMTIIDNIALFERNGFRFTVDDDQPTTKKLKITAIPFSKGTQFGVDDVHELASIVADNTNPGEMVRLPKARAMFASRACRSSFMIGKALDKGQMARVVAKMATIEQPWNCPHGRPTMRHLADVSASLRTAAG 1618
D D AA + RVL K F +M VVGQFNLGF+I L DLFI+DQHA DEK+ +E+LQQTT IHQQPLVRP+PL+ +A EEMTI+D++ LF++ GF F VD T+KLK+ ++PFSK TQ+GVDDV EL S+V ++ + +RLPK AMFASRACRS+ MIG AL + +M +++ ++A +EQPWNCPHGRPTMRHL D+S +L++ G
Sbjct: 613 DDDLVEAAVSLQRVLSKADFRRMEVVGQFNLGFIIARLDRDLFIIDQHASDEKFRYEMLQQTTVIHQQPLVRPMPLDLTAVEEMTILDHLPLFKKQGFHFQVDPSAAATQKLKLISVPFSKHTQWGVDDVRELVSLVLESPHAASTIRLPKTLAMFASRACRSAVMIGTALKRDEMQKILLQLAELEQPWNCPHGRPTMRHLVDLSCTLQSQKG 826
BLAST of mRNA_E-siliculosus-1a_F_contig1176.1141.1 vs. uniprot
Match: K3WIM5_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WIM5_GLOUD) HSP 1 Score: 256 bits (653), Expect = 1.350e-71 Identity = 122/211 (57.82%), Postives = 157/211 (74.41%), Query Frame = 2
Query: 977 DRDSQAAARAFSRVLQKEHFNQMRVVGQFNLGFMICLLGSDLFILDQHACDEKYNFEVLQQTTTIHQQPLVRPLPLETSASEEMTIIDNIALFERNGFRFTVDDDQPTTKKLKITAIPFSKGTQFGVDDVHELASIVADNTNPGEMVRLPKARAMFASRACRSSFMIGKALDKGQMARVVAKMATIEQPWNCPHG------RPTMRHLADV 1591
+ D+ AA A RVL+K+ F +M+V+GQFNLGF+I L DLFI+DQHA DEK+N+E LQQTT +HQQPLVRPLPLE +A EEM I+D++ +F +NGF F V D P TKKLK+ ++PF+K TQFGV+D+ ELAS++ D +RLPK AMFASRACRSS MIG AL K +M ++V ++ +EQPWNCPHG RPT+RHL D+
Sbjct: 483 EEDNDVAAAALQRVLKKDDFKRMQVLGQFNLGFIIGKLDDDLFIIDQHASDEKFNYETLQQTTVLHQQPLVRPLPLELTAGEEMVILDHLDVFAKNGFTFLVQKDAPATKKLKLLSLPFTKHTQFGVEDIRELASLLMDTPTNAASIRLPKVMAMFASRACRSSIMIGTALHKDEMQKIVRNLSGLEQPWNCPHGYDFSAFRPTLRHLMDL 693
BLAST of mRNA_E-siliculosus-1a_F_contig1176.1141.1 vs. uniprot
Match: A0A6A5AM97_9STRA (MutL_C domain-containing protein (Fragment) n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A6A5AM97_9STRA) HSP 1 Score: 239 bits (611), Expect = 2.300e-71 Identity = 112/191 (58.64%), Postives = 149/191 (78.01%), Query Frame = 2
Query: 1034 FNQMRVVGQFNLGFMICLLGSDLFILDQHACDEKYNFEVLQQTTTIHQQPLVRPLPLETSASEEMTIIDNIALFERNGFRFTVDDDQPTTKKLKITAIPFSKGTQFGVDDVHELASIVADNTNPGEM--VRLPKARAMFASRACRSSFMIGKALDKGQMARVVAKMATIEQPWNCPHGRPTMRHLADVSAS 1600
F +M V+GQFNLGF+I L +DLFI+DQHA DEK+ +E+LQQTT +HQQPLVRP+ LE +A EEMTI+D++ LF++ GF F VD P T+KL++ ++PFSK TQ+GVDDV EL S+V ++ + +RLPK AMFASRACRS+ MIG AL + M ++V ++A +EQPWNCPHGRPTMRHL D+S++
Sbjct: 3 FRRMHVIGQFNLGFIIARLDADLFIIDQHASDEKFRYEMLQQTTVLHQQPLVRPMALELTAVEEMTILDHLPLFKKQGFHFQVDPAAPVTQKLRLISVPFSKHTQWGVDDVRELVSLVLESPHAAAAATIRLPKTLAMFASRACRSAVMIGTALKREDMQKIVVQLAELEQPWNCPHGRPTMRHLVDLSST 193
BLAST of mRNA_E-siliculosus-1a_F_contig1176.1141.1 vs. uniprot
Match: A0A6A3WZ68_9STRA (Uncharacterized protein n=6 Tax=Phytophthora TaxID=4783 RepID=A0A6A3WZ68_9STRA) HSP 1 Score: 257 bits (657), Expect = 3.020e-71 Identity = 121/203 (59.61%), Postives = 156/203 (76.85%), Query Frame = 2
Query: 983 DSQAAARAFSRVLQKEHFNQMRVVGQFNLGFMICLLGSDLFILDQHACDEKYNFEVLQQTTTIHQQPLVRPLPLETSASEEMTIIDNIALFERNGFRFTVDDDQPTTKKLKITAIPFSKGTQFGVDDVHELASIVADNTNPGEMVRLPKARAMFASRACRSSFMIGKALDKGQMARVVAKMATIEQPWNCPHGRPTMRHLADV 1591
D++ AA A RVL+KE F +M V+GQFNLGF+I L +DLFI+DQHA DEK+N+E LQQTT +HQQPLVRPL LE +A EEM I+D++ +F +NGF F VD D P TKKLK+ ++PF+K TQFG +D+ ELAS++ D +RLPK AMFASRACRSS MIG AL K +M ++V ++ ++QPWNCPHGRPT+RHL D+
Sbjct: 608 DNEVAAAALQRVLKKEDFKRMEVLGQFNLGFIIGKLDNDLFIIDQHASDEKFNYETLQQTTVMHQQPLVRPLMLELTAGEEMVILDHLDVFAKNGFTFLVDKDAPATKKLKLLSLPFTKHTQFGTEDIRELASLLMDAPLNPSTIRLPKVMAMFASRACRSSIMIGTALHKEEMQKIVRNLSGLDQPWNCPHGRPTLRHLVDL 810 The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig1176.1141.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-siliculosus-1a_F_contig1176.1141.1 >prot_E-siliculosus-1a_F_contig1176.1141.1 ID=prot_E-siliculosus-1a_F_contig1176.1141.1|Name=mRNA_E-siliculosus-1a_F_contig1176.1141.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=421bp MKRERRTKGAEDRKRRARDFDAPAGAMRSLDPVRSEGGDRQRSTSPSNPKback to top mRNA from alignment at E-siliculosus-1a_F_contig1176:32927..36048- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-siliculosus-1a_F_contig1176.1141.1 ID=mRNA_E-siliculosus-1a_F_contig1176.1141.1|Name=mRNA_E-siliculosus-1a_F_contig1176.1141.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=3122bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1176:32927..36048- (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top Coding sequence (CDS) from alignment at E-siliculosus-1a_F_contig1176:32927..36048- >mRNA_E-siliculosus-1a_F_contig1176.1141.1 ID=mRNA_E-siliculosus-1a_F_contig1176.1141.1|Name=mRNA_E-siliculosus-1a_F_contig1176.1141.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=2526bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1176:32927..36048- (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top |