mRNA_E-siliculosus-1a_F_contig1175.1134.1 (mRNA) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview


Name	mRNA_E-siliculosus-1a_F_contig1175.1134.1
Unique Name	mRNA_E-siliculosus-1a_F_contig1175.1134.1
Type	mRNA
Organism	Ectocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)

Homology

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BLAST of mRNA_E-siliculosus-1a_F_contig1175.1134.1 vs. uniprot
Match: D7FS59_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FS59_ECTSI)

HSP 1 Score: 598 bits (1543), Expect = 1.000e-211
Identity = 302/306 (98.69%), Postives = 303/306 (99.02%), Query Frame = 1

Query:  142 MGAMRPAPGSGRDSRGSTPPRSGNLARSAAMGSSSTDAFAWTASPCRALSGLAVLQVSCGSRHTLATVEGGEAYSWGWGACGQLGHGDDHSVGSPRVIEALKTGEGDAALGPVSWVSAGGIHSAAVLECGRVFTWGGSSYGQLGLGPAVTTQGMQPLPGKVMLSETESPLGSPRVSATGLTRHSSMTQKAAVLAMETAPKTELLAKTVVCGGMHTAALTSEGVVYCWGRADSGQLGIGAAWVHETSSGVMGVEWPRRVRGLLEGRRTESIACGGFHTAAVTTDGECYTWGKEDFGMLGCSNAALLK 1059
            MGAMRPAPGSGRDSRGSTPPRSGNLARS AMGSSSTDAFAWTASPCRALSGLAVLQVSCGSRHTLATVEGGEAYSWGWGACGQLGHGDDHSVG PRVIEALKTGEGDAALGPVSWVSAGGIHSAAVLE GRVFTWGGSSYGQLGLGPAVTTQGMQPLPGKVMLSETESPLGSPRVSATGLTRHSSMTQKAAVLAMETAPKTELLAKTVVCGGMHTAALT+EGVVYCWGRADSGQLGIGAAWVHETSSGVMGVEWPRRVRGLLEGRRTESIACGGFHTAAVTTDGECYTWGKEDFGMLGCSNAALLK
Sbjct:    1 MGAMRPAPGSGRDSRGSTPPRSGNLARSPAMGSSSTDAFAWTASPCRALSGLAVLQVSCGSRHTLATVEGGEAYSWGWGACGQLGHGDDHSVGCPRVIEALKTGEGDAALGPVSWVSAGGIHSAAVLEGGRVFTWGGSSYGQLGLGPAVTTQGMQPLPGKVMLSETESPLGSPRVSATGLTRHSSMTQKAAVLAMETAPKTELLAKTVVCGGMHTAALTAEGVVYCWGRADSGQLGIGAAWVHETSSGVMGVEWPRRVRGLLEGRRTESIACGGFHTAAVTTDGECYTWGKEDFGMLGCSNAALLK 306

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BLAST of mRNA_E-siliculosus-1a_F_contig1175.1134.1 vs. uniprot
Match: A0A6H5JED5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JED5_9PHAE)

HSP 1 Score: 221 bits (564), Expect = 3.140e-66
Identity = 111/136 (81.62%), Postives = 111/136 (81.62%), Query Frame = 1

Query:  724 METAPKTELLAKTVVCGGMHTAALTSEGVVYCWGRADSGQLGIGAAWVHETSSGVMGVEWPRRVRGLLEGRRT------------------------ESIACGGFHTAAVTTDGECYTWGKEDFGMLGCSNAALLK 1059
            METAPKTELLAKTVVCGGMHTAALTSEGVVYCWGRADSGQLGIGAAWVHETSSGVMGVEWPRRVRGLLEGRRT                        ESIACGGFHTAAVTTDGECYTWGKEDFGMLGCSN ALLK
Sbjct:    1 METAPKTELLAKTVVCGGMHTAALTSEGVVYCWGRADSGQLGIGAAWVHETSSGVMGVEWPRRVRGLLEGRRTVRQRLDDVVVPRLEALVSDNVPSEESIACGGFHTAAVTTDGECYTWGKEDFGMLGCSNEALLK 136

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BLAST of mRNA_E-siliculosus-1a_F_contig1175.1134.1 vs. uniprot
Match: H3GJ83_PHYRM (Uncharacterized protein n=2 Tax=Phytophthora TaxID=4783 RepID=H3GJ83_PHYRM)

HSP 1 Score: 184 bits (468), Expect = 1.170e-52
Identity = 109/251 (43.43%), Postives = 138/251 (54.98%), Query Frame = 1

Query:  286 LSGLAVLQVSCGSRHTLATVEGGEAYSWGWGACGQLGHGDDHSVGSPRVIEALKTGEGDAALGPVSWVSAGGIHSAAVLECGRVFTWGGSSYGQLGLGPAVTTQGMQPLPGKVMLSETESPLGSPRVSATGLTRHSSMTQKAAVLAMETAPKTELLAKTVVCGGMHTAALTSEGVVYCWGRADSGQLGIGAAWVHETSS-GVMGVEWPRRVRGLLEGRRTESIACGGFHTAAVTTDGECYTWGKEDFGMLG 1035
            L+G  ++ VSCGSRHT+A    G  YSWGWG+ GQLGHGD  S+  P+ I   +    D  +  V ++S GG HSAAV   G ++ WG S +GQLGL P       + LP K  + E  +                                 E + K + CGG HTAALTS G VY WGR DSGQLGIGAAW+ +T   G++GV  PR + G   G +   +ACG FH+AAVT +G  Y WGKED+GMLG
Sbjct:   50 LAGEEIIAVSCGSRHTMALTAAGTVYSWGWGSMGQLGHGDLKSINEPQKIAFFEL---DGLV--VDYISCGGCHSAAVTNDGTLYMWGESHWGQLGL-PKEFEAAHESLPVKCPMPEGNA--------------------------------NEKILK-ISCGGTHTAALTSLGRVYVWGRGDSGQLGIGAAWLKDTEDEGLLGVSRPRLLEGF-NGEKVVQVACGAFHSAAVTEEGHVYIWGKEDYGMLG 260

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BLAST of mRNA_E-siliculosus-1a_F_contig1175.1134.1 vs. uniprot
Match: W2PSP6_PHYPN (Uncharacterized protein n=5 Tax=Phytophthora parasitica TaxID=4792 RepID=W2PSP6_PHYPN)

HSP 1 Score: 183 bits (464), Expect = 1.290e-51
Identity = 108/251 (43.03%), Postives = 138/251 (54.98%), Query Frame = 1

Query:  301 VLQVSCGSRHTLATVEGGEAYSWGWGACGQLGHGDDHSVGSPRVIEALKTGEGDAALGPVSWVSAGGIHSAAVLECGRVFTWGGSSYGQLGLGPAVTTQGMQPLPGKVMLSETESPLGSPRVSATGLTRHSSMTQKAAVLAMETAPKTELLAKTVVCGGMHTAALTSEGVVYCWGRADSGQLGIGAAWVHETSS-GVMGVEWPRRVRGLLEGRRTESIACGGFHTAAVTTDGECYTWGKEDFGMLGCSNAA 1050
            V+ VSCGSRHT+A    G  YSWGWG+ GQLGHGD  S+  P+ I+  +  EG      V ++S GG HSAAV   G ++ WG S +GQLGL P       + LP K  + E E+                                 E++ K V CGG HTAALTS G VY WGR DSGQLGIG+AW+ +  +  +MG   P  V+G  +G +   +ACG FH+AAVT  G  Y WGKED+GMLG   ++
Sbjct:   76 VVAVSCGSRHTMALTASGAVYSWGWGSMGQLGHGDLKSINEPQKIDFFEK-EGHM----VDYISCGGCHSAAVTNDGTLYMWGESHWGQLGL-PKEYDAAHESLPVKCPMPEGEAD--------------------------------EVIVK-VSCGGTHTAALTSLGHVYVWGRGDSGQLGIGSAWLKDPENESLMGASRPHLVKGF-DGEKVVQVACGAFHSAAVTEQGHVYIWGKEDYGMLGVGQSS 286

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BLAST of mRNA_E-siliculosus-1a_F_contig1175.1134.1 vs. uniprot
Match: A0A067CET3_SAPPC (Uncharacterized protein n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067CET3_SAPPC)

HSP 1 Score: 185 bits (469), Expect = 2.400e-51
Identity = 108/255 (42.35%), Postives = 134/255 (52.55%), Query Frame = 1

Query:  283 ALSGLAVLQVSCGSRHTLATVEGGEAYSWGWGACGQLGHGDDHSVGSPRVIEALKTGEGDAALGPVSWVSAGGIHSAAVLECGRVFTWGGSSYGQLGLGPAVTTQGMQPLPGKVMLSETESPLGSPRVSATGLTRHSSMTQKAAVLAMETAPKTELLAKTVVCGGMHTAALTSEGVVYCWGRADSGQLGIGAAWVH---ETSSGVMGVEWPRRVR-GLLEGRRTESIACGGFHTAAVTTDGECYTWGKEDFGMLG 1035
            AL GL +  +SCGSRH+LA    G+ +SWGWG  GQLGHG+  S+  P  I        DAA   +++VSAGG HS AV   GRVF WG + +GQLGL P  T                                H +M  +  VL     P T+     + CGG HTAAL++ G VY WGR D+GQLG+G  WVH   E + G  G   P R+     +  R   ++CG FHTAAVT  G  YTWGKED+GMLG
Sbjct:   47 ALRGLDITAISCGSRHSLALASTGDVFSWGWGQMGQLGHGNHKSLNLPTPIVYF-----DAANIKIAYVSAGGCHSGAVSTDGRVFMWGEAHWGQLGLSPDYTDV------------------------------HQAMPAECKVLP----PNTDEKIVAISCGGTHTAALSNHGYVYTWGRRDNGQLGLGRDWVHMEPEAADGTCGTSIPTRIDPAQFDNERVIQVSCGAFHTAAVTESGHVYTWGKEDYGMLG 262

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BLAST of mRNA_E-siliculosus-1a_F_contig1175.1134.1 vs. uniprot
Match: W2PSP2_PHYPN (Uncharacterized protein n=12 Tax=Phytophthora parasitica TaxID=4792 RepID=W2PSP2_PHYPN)

HSP 1 Score: 183 bits (464), Expect = 1.190e-50
Identity = 108/251 (43.03%), Postives = 138/251 (54.98%), Query Frame = 1

Query:  301 VLQVSCGSRHTLATVEGGEAYSWGWGACGQLGHGDDHSVGSPRVIEALKTGEGDAALGPVSWVSAGGIHSAAVLECGRVFTWGGSSYGQLGLGPAVTTQGMQPLPGKVMLSETESPLGSPRVSATGLTRHSSMTQKAAVLAMETAPKTELLAKTVVCGGMHTAALTSEGVVYCWGRADSGQLGIGAAWVHETSS-GVMGVEWPRRVRGLLEGRRTESIACGGFHTAAVTTDGECYTWGKEDFGMLGCSNAA 1050
            V+ VSCGSRHT+A    G  YSWGWG+ GQLGHGD  S+  P+ I+  +  EG      V ++S GG HSAAV   G ++ WG S +GQLGL P       + LP K  + E E+                                 E++ K V CGG HTAALTS G VY WGR DSGQLGIG+AW+ +  +  +MG   P  V+G  +G +   +ACG FH+AAVT  G  Y WGKED+GMLG   ++
Sbjct:   76 VVAVSCGSRHTMALTASGAVYSWGWGSMGQLGHGDLKSINEPQKIDFFEK-EGHM----VDYISCGGCHSAAVTNDGTLYMWGESHWGQLGL-PKEYDAAHESLPVKCPMPEGEAD--------------------------------EVIVK-VSCGGTHTAALTSLGHVYVWGRGDSGQLGIGSAWLKDPENESLMGASRPHLVKGF-DGEKVVQVACGAFHSAAVTEQGHVYIWGKEDYGMLGVGQSS 286

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BLAST of mRNA_E-siliculosus-1a_F_contig1175.1134.1 vs. uniprot
Match: K3W6X4_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3W6X4_GLOUD)

HSP 1 Score: 182 bits (462), Expect = 3.370e-50
Identity = 108/248 (43.55%), Postives = 135/248 (54.44%), Query Frame = 1

Query:  295 LAVLQVSCGSRHTLATVEGGEAYSWGWGACGQLGHGDDHSVGSPRVIEALKTGEGDAALGPVSWVSAGGIHSAAVLECGRVFTWGGSSYGQLGLGPAVTTQGMQPLPGKVMLSETESPLGSPRVSATGLTRHSSMTQKAAVLAMETAPKTELLAKTVVCGGMHTAALTSEGVVYCWGRADSGQLGIGAAWVHETS-SGVMGVEWPRRVRGLLEGRRTESIACGGFHTAAVTTDGECYTWGKEDFGMLG 1035
            L +  VSCGSRHT+     GE YSWGWG+ GQLGHGD  S   PR IE   T +G      V ++S GG HSAAV + G V+TWG + +GQLGL P   +   Q LP K  + +  S     ++S                                 CGG H AALT +G VY WGR D+GQLGIG AW+H++   G++GV  P RV G  +  +   +ACG FH+AAVT  G  Y WGKED+GMLG
Sbjct:   53 LDIAAVSCGSRHTMVLTTQGEVYSWGWGSMGQLGHGDLKSSNFPRKIEFFAT-QGLV----VEYISCGGCHSAAVTKDGAVYTWGEAHWGQLGL-PKEFSDLHQSLPAKCPILQDGSEEKVVKIS---------------------------------CGGAHMAALTDKGHVYMWGRCDNGQLGIGQAWLHDSDCEGLLGVSHPHRVEGFGD-EKVVQVACGAFHSAAVTEAGSVYIWGKEDYGMLG 260

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BLAST of mRNA_E-siliculosus-1a_F_contig1175.1134.1 vs. uniprot
Match: A0A0W8C445_PHYNI (E3 ubiquitin-protein ligase HERC2 n=7 Tax=Phytophthora TaxID=4783 RepID=A0A0W8C445_PHYNI)

HSP 1 Score: 183 bits (464), Expect = 1.790e-49
Identity = 108/251 (43.03%), Postives = 138/251 (54.98%), Query Frame = 1

Query:  301 VLQVSCGSRHTLATVEGGEAYSWGWGACGQLGHGDDHSVGSPRVIEALKTGEGDAALGPVSWVSAGGIHSAAVLECGRVFTWGGSSYGQLGLGPAVTTQGMQPLPGKVMLSETESPLGSPRVSATGLTRHSSMTQKAAVLAMETAPKTELLAKTVVCGGMHTAALTSEGVVYCWGRADSGQLGIGAAWVHETSS-GVMGVEWPRRVRGLLEGRRTESIACGGFHTAAVTTDGECYTWGKEDFGMLGCSNAA 1050
            V+ VSCGSRHT+A    G  YSWGWG+ GQLGHGD  S+  P+ I+  +  EG      V ++S GG HSAAV   G ++ WG S +GQLGL P       + LP K  + E E+                                 E++ K V CGG HTAALTS G VY WGR DSGQLGIG+AW+ +  +  +MG   P  V+G  +G +   +ACG FH+AAVT  G  Y WGKED+GMLG   ++
Sbjct:  170 VVAVSCGSRHTMALTASGAVYSWGWGSMGQLGHGDLKSINEPQKIDFFEK-EGHM----VDYISCGGCHSAAVTNDGTLYMWGESHWGQLGL-PKEYDAAHESLPVKCPMPEGEAD--------------------------------EVIVK-VSCGGTHTAALTSLGHVYVWGRGDSGQLGIGSAWLKDPENESLMGASRPHLVKGF-DGEKVVQVACGAFHSAAVTEQGHVYIWGKEDYGMLGVGQSS 380

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BLAST of mRNA_E-siliculosus-1a_F_contig1175.1134.1 vs. uniprot
Match: A0A0W8DLB9_PHYNI (Uncharacterized protein n=1 Tax=Phytophthora nicotianae TaxID=4790 RepID=A0A0W8DLB9_PHYNI)

HSP 1 Score: 183 bits (464), Expect = 3.660e-49
Identity = 108/251 (43.03%), Postives = 138/251 (54.98%), Query Frame = 1

Query:  301 VLQVSCGSRHTLATVEGGEAYSWGWGACGQLGHGDDHSVGSPRVIEALKTGEGDAALGPVSWVSAGGIHSAAVLECGRVFTWGGSSYGQLGLGPAVTTQGMQPLPGKVMLSETESPLGSPRVSATGLTRHSSMTQKAAVLAMETAPKTELLAKTVVCGGMHTAALTSEGVVYCWGRADSGQLGIGAAWVHETSS-GVMGVEWPRRVRGLLEGRRTESIACGGFHTAAVTTDGECYTWGKEDFGMLGCSNAA 1050
            V+ VSCGSRHT+A    G  YSWGWG+ GQLGHGD  S+  P+ I+  +  EG      V ++S GG HSAAV   G ++ WG S +GQLGL P       + LP K  + E E+                                 E++ K V CGG HTAALTS G VY WGR DSGQLGIG+AW+ +  +  +MG   P  V+G  +G +   +ACG FH+AAVT  G  Y WGKED+GMLG   ++
Sbjct:  301 VVAVSCGSRHTMALTASGAVYSWGWGSMGQLGHGDLKSINEPQKIDFFEK-EGHM----VDYISCGGCHSAAVTNDGTLYMWGESHWGQLGL-PKEYDAAHESLPVKCPMPEGEAD--------------------------------EVIVK-VSCGGTHTAALTSLGHVYVWGRGDSGQLGIGSAWLKDPENESLMGASRPHLVKGF-DGEKVVQVACGAFHSAAVTEQGHVYIWGKEDYGMLGVGQSS 511

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BLAST of mRNA_E-siliculosus-1a_F_contig1175.1134.1 vs. uniprot
Match: G4YIM6_PHYSP (Uncharacterized protein n=4 Tax=Phytophthora TaxID=4783 RepID=G4YIM6_PHYSP)

HSP 1 Score: 178 bits (452), Expect = 9.860e-49
Identity = 111/256 (43.36%), Postives = 136/256 (53.12%), Query Frame = 1

Query:  286 LSGLAVLQVSCGSRHTLATVEGGEAYSWGWGACGQLGHGDDHSVGSPRVI-----EALKTGEGDAALGPVSWVSAGGIHSAAVLECGRVFTWGGSSYGQLGLGPAVTTQGMQPLPGKVMLSETESPLGSPRVSATGLTRHSSMTQKAAVLAMETAPKTELLAKTVVCGGMHTAALTSEGVVYCWGRADSGQLGIGAAWVHETS-SGVMGVEWPRRVRGLLEGRRTESIACGGFHTAAVTTDGECYTWGKEDFGMLG 1035
            L G  ++ VSCGSRHT+A    G  YSWGWG+ GQLGHGD  S+  P+ I     E LK          V +VS GG HSAAV   G ++ WG + +GQLGL P       +  P K  L E                           +A E+  K       V CGG HTAALT+ G VY WGR DSGQLGIG+AW+ +T  +G++GV  P  V G   G +   +ACG FH+AAVT  G  Y WGKED+GMLG
Sbjct:   50 LLGEEIVAVSCGSRHTMALTASGAVYSWGWGSMGQLGHGDLKSINVPQKIAFFEQEGLK----------VDYVSCGGCHSAAVTNDGTLYMWGETHWGQLGL-PKEFEAAHESFPVKCPLLEG--------------------------VADESVVK-------VSCGGTHTAALTNLGRVYVWGRGDSGQLGIGSAWLKDTDDNGLLGVSRPHLVEGF-NGEKVVQVACGAFHSAAVTEQGHVYIWGKEDYGMLG 260

The following BLAST results are available for this feature:

BLAST of mRNA_E-siliculosus-1a_F_contig1175.1134.1 vs. uniprot

BLAST of mRNA_E-siliculosus-1a_F_contig1175.1134.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
D7FS59_ECTSI	1.000e-211	98.69	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]
A0A6H5JED5_9PHAE	3.140e-66	81.62	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
H3GJ83_PHYRM	1.170e-52	43.43	Uncharacterized protein n=2 Tax=Phytophthora TaxID...	[more]
W2PSP6_PHYPN	1.290e-51	43.03	Uncharacterized protein n=5 Tax=Phytophthora paras...	[more]
A0A067CET3_SAPPC	2.400e-51	42.35	Uncharacterized protein n=2 Tax=Saprolegnia TaxID=...	[more]
W2PSP2_PHYPN	1.190e-50	43.03	Uncharacterized protein n=12 Tax=Phytophthora para...	[more]
K3W6X4_GLOUD	3.370e-50	43.55	Uncharacterized protein n=1 Tax=Globisporangium ul...	[more]
A0A0W8C445_PHYNI	1.790e-49	43.03	E3 ubiquitin-protein ligase HERC2 n=7 Tax=Phytopht...	[more]
A0A0W8DLB9_PHYNI	3.660e-49	43.03	Uncharacterized protein n=1 Tax=Phytophthora nicot...	[more]
G4YIM6_PHYSP	9.860e-49	43.36	Uncharacterized protein n=4 Tax=Phytophthora TaxID...	[more]

Pages

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
E-siliculosus-1a_F_contig1175	contig	E-siliculosus-1a_F_contig1175:28456..35943 +

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90	2022-09-19
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female	2021-02-24

Properties


Property Name	Value
Start	1
Stop	0
Cds size	1059
Model size	1059
Exons	9
Ec32 ortholog	Ec-01_000660.1
Ec32 ortholog description	Regulator of chromosome condensation 1/beta-lactamase-inhibitor protein II
Hectar predicted targeting category	other localisation
Best eggNOG OG	NA\|NA\|NA
Best tax level	Eukaryota
COG Functional cat.	DZ
EggNOG OGs	COG5184@1,KOG1426@2759
EggNOG free text desc.	guanyl-nucleotide exchange factor activity
Seed eggNOG ortholog	2880.D7FS59
Seed ortholog evalue	5e-169
Seed ortholog score	600.5
Taxonomic scope	Eukaryota

Relationships

The following CDS feature(s) are a part of this mRNA:

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type	Position
mRNA_E-siliculosus-1a_F_contig1175.1134.1	prot_E-siliculosus-1a_F_contig1175.1134.1	Ectocarpus siliculosus Ec863f_EcPH12_90f female	polypeptide	E-siliculosus-1a_F_contig1175 28456..35943 +

Sequences

The following sequences are available for this feature:

protein sequence
mRNA from alignment at E-siliculosus-1a_F_contig1175:28456..35943+
coding sequence from alignment at E-siliculosus-1a_F_contig1175:28456..35943+

protein sequence of mRNA_E-siliculosus-1a_F_contig1175.1134.1

>prot_E-siliculosus-1a_F_contig1175.1134.1 ID=prot_E-siliculosus-1a_F_contig1175.1134.1|Name=mRNA_E-siliculosus-1a_F_contig1175.1134.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=353bp
MASTMLLLWGKNDDGQLGSTCKSLSRGHLEDESAKVSTPLSPSAPTRMGA
MRPAPGSGRDSRGSTPPRSGNLARSAAMGSSSTDAFAWTASPCRALSGLA
VLQVSCGSRHTLATVEGGEAYSWGWGACGQLGHGDDHSVGSPRVIEALKT
GEGDAALGPVSWVSAGGIHSAAVLECGRVFTWGGSSYGQLGLGPAVTTQG
MQPLPGKVMLSETESPLGSPRVSATGLTRHSSMTQKAAVLAMETAPKTEL
LAKTVVCGGMHTAALTSEGVVYCWGRADSGQLGIGAAWVHETSSGVMGVE
WPRRVRGLLEGRRTESIACGGFHTAAVTTDGECYTWGKEDFGMLGCSNAA
LLK

mRNA from alignment at E-siliculosus-1a_F_contig1175:28456..35943+

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

>mRNA_E-siliculosus-1a_F_contig1175.1134.1 ID=mRNA_E-siliculosus-1a_F_contig1175.1134.1|Name=mRNA_E-siliculosus-1a_F_contig1175.1134.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=7488bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1175:28456..35943+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
ATGGCCTCCACCATGCTATTGCTTTGGGGCAAAAACGATGATGGTAAGAC
TCTGGCAGCGCGTTGGTATGTCTTTGAGCGTTTTGATCCGCAACTCGGCT
GTTGCACAACCAACTTTTGCGCCTGCACTCGGCGTACGGTCCGCCCCTCA
TGATCTCACCATTCTAGACCAAGAACAGCGACATGTGGCGCCTGCCATTG
TTGTCTGCGACAGGTCAGCTCGGCAGCACTTGCAAAAGCCTGTCTCGAGG
GCATCTGGAGGATGAGAGCGCCAAGGTGGGCAAAGTTTCGTTCGTCGTGA
CCGGTGTATCCATGGTCGCAGCAGTGTAGTCTAAAACGGTAATGACCTAC
GATACCTCATGGAAGATCTTGTGTAGGACACCGCACCGGCTTATTGCTTT
TGCACGCTTCATGCCACGTGTGCTGACCGCATATGCATGCACAAACGTGT
GTTTTTGGTAGGAGAGAGGACGCCAGACCGCGATGAGGAGCAATTGTAAT
GGATACACATGCCGTAAGTGACGTAAGATATCACGCCCCCGGACCGATTT
TCAGAGCTCGATTTCCCCACAGCACCAAGAGTTGAAGCGCCGCAAAACGG
CGGCGTCTCGTCGAGAGCTTTCCGAAAACGTGTGGGATGATTGATGCATC
CTCTTCATCGTTGAGTATTCCAACTTTAAAAATGGGTCAAGGGGTGTGGT
ATCTTGTGTCACCGACGGTACGCACATGTATGCATACACATGTACACATG
CCTATGTATTACAGCGTACAGCAGGCCAGAGTTTGTTTCCAGGATACCAC
ACAGCAGAACGCCAGACAAAAGCTGCGTAAAATAAGCGGCGAAAAATGGT
AAATATAGCATTGGTGGTATAGGGGATTCGTGGGTTTGTCCAACCTCAGC
ATGACTCTCCTTCGGGGTCGAATCCTTCGTACTACCTTTTGGGCCACCGA
AATCCCCGCCGGTACACCGTTTTCTGTCATTTTCTCAATTTTTTCGCAAC
CCACTTTGTTCTCTGGATTTGACGGTTAAATTTAGGGCCCTTCGCAATCA
CTCTACTCCGCAAAGGTACAGGCTGTCCATGGTGTGTTAGAATAGTAGAA
GAATGTGCGCAGGACATCTCAGGCAATCGCAGTTACAGCAGTACAACGAC
TATGCGGCCGGTTGGTGAGTCTGCCTCTGATTGCGCACAGGCGGGGTACA
GGCATCTGTGGTTGGGTATAGGAGAGAGCAAATATATCCAGCCGGTTTCC
TTCCCAATAGCTTCAAAGACTTTAGTGTATACAACCGCGAACGGGTGCTC
TTTCTTTAATGGAATAGTATGAGACGGTTGTCTCCAGGTTCACGTGTGAG
CAAGTTCCCTTTGGGATGTGTGGTGATTACTCCACGACGAATAGGACGTC
ACCTCAAAATGGTACGTTTTCGGAAAGCTCTCGACGAGACGGTTCCGGCG
CCGGCATTTCGGCACCGTTACTGTTTATACAGCAAAGTAATCGAGCTTTG
AAAATCGATCCCAAGGGAGGTGATATCTTGTGCGATCTACGGTATATTCG
ACGTATCAACGCGCCACTTGTCCGCAGAATCCTTTGGGCCGCTCAAATAA
GGCCAGTCGCCCTGAATAATGCCGGCGAAAATCGCGTGACACGAATCAAG
TATTCAAGTTATCTCATGCTTTGAATATTGCCCGGGTGCTTGGTGTAAGG
CCAGTCATACCCCTTGGCACTATGCTTTACGGTGAGTTCGCGTTGCTGTG
GACGACCAGAGAAATGCGCCGCCCATCGGAGTAGCTCTGCACCAAGTTGT
CGCTCTCCGAAAGCTCCAAGACTGACCACACGTTCAAAAAAAAGGGTGTT
GTTCAGCACAGAGGCGTCCTTGGACGCTCTCCCAAAAAAAAATGCTTTTT
TGAAGCTGCTCCGCACACCGATACGACAAGTACCGTAGGTTGCACAAGAC
ATCACACCCCCTGGACCGATTTTCAAAGCTCGATTTCTCGGTAGAAGGAG
CAGCAACAGGTGCCGAAAATGGCGGGGTTGGAGCCGTCTCGTCGAGAGCT
TTCCGAAAACGTTTTATTTGAGTTTAGCATACTCTTCCTTGTGGAGTAAT
CACGCTTTGAAAATCGGTCCAGGGGGTGTGGTATCTTACGTGATGTCACC
TACGGCAGTATGTACTTCTTGACGGTCATGAAAACTAGAGACCTGGCGAC
CAACCCCCTTCGTCTGATCCCCCTCGACACCACCCGAGGAATGCCTCAAT
GCCATGTCCAACCGAGCTTGCTGCTGCACGTAGGCCGGGGGCGGAACCCG
TCTCAATGGAGGACAACCGCAACGTTTTTCGCGCTCTCTACATAGCTATG
TACGCGTCAGCGTTGCCGTTGTCTGGACGACAAGATGGCGTTACACGTGT
ACTGTAATTTCGATCGGCTACACTATGATGCTGACGCCTGTGCCCCAAGT
ACAACGCAAGCTTCGTCTCGTGGTGTGCTGACTGCGCGAGGTGGAAGTTC
TGAACTCCCCCCCTCCCTTCCGCTTCGCGCTTGGTGATGATTGAAAGCCT
GGTCCGGTGAGAACCCGGCGTGCTCCGTCCCGGCTTTGTAGGGATGCGAG
GTCAATGGTCTAACGACCACGGCATGCACGACTATGAGTACACCCCCCCC
CCAGGTCTTCATCCCCCAGCCACGAACACCGTTCCCACCAGGTGTCAACG
CCACTGTCTCCTTCAGCACCCACGAGGATGGGCGCCATGCGACCGGCGCC
GGGCAGCGGCCGCGACTCGCGTGGCTCCACACCCCCACGCTCGGGCAACT
TGGCCAGGTCCGCCGCAATGGGCAGCAGTTCTACGGACGCCTTCGCCTGG
ACGGCCTCGCCTTGCAGGTGCACGCGGTATATAATTTATTGTGGAGATAC
GTGTTTTTTTTTTCTTTTCTTTCCCCAGACTGGTGTGTGTTCGATCGTGA
TTCACGTGTTCGTTTTTTTCTATTTTTCCCAGACTGTTGGATCGTGGTTC
ATGTTTTTCGTCTATTTTTTTCCCAGGCTAGATTGTATTGGGTTGTGGTC
GTAATTGCGGCGTTTCGTAAAAAGAAACGCCGTTACCTTTACGTTTAACC
CCTAGATCTCGTGTCGCAGGAGGCGACAGGTGACTCGGTGCTCTCTTTCG
TTGTCTTTTTATCCTCATCATGTTGCTGCCGTAGTTCCCACACATGCTGA
AACGAACGTATCTGGTTCTTAGCCAACAGCTGCCAGCAGCGTGTCGGCAC
ACGTAATTACCACCCCACCGACCGTGCTATTCCAAGCATCTTCCTCTTCA
TCACCTGCCCCCGTGTGTGCATGTATCCCCCCTCTACCCTCACGCAAGGA
TGATGACCAGCGCCTGGTTCCATCCTTCTTCCTTGTGAGACGTAGCCTGG
GCCGGCGAAAAACCGGCATTTCGTTCCGTCCCGGCATTGCAGGAATACGA
GGCCAACCATCTACCAACTACGGCATGCGTTTACATGAGTACACCCCCCC
CCCCCGTACGTCATTTTCACTTTCTCCCCTCTTCAGAGCCCTCTCGGGCC
TGGCGGTGTTGCAAGTTTCCTGCGGGTCGAGACACACCCTGGCGACGGTT
GAGGGGGGCGAGGCGTACAGCTGGGGTTGGGGGGCCTGCGGACAGGTGTG
ACAGAGGGGGGGGGGGGTACTTGGTAAATGCTCGCGCGTTGCAAGTGGTC
TCTTCGGCCAAACATCTTTGATGAAAACTGCTGGTGAAAACTACTACAAC
AAAGAAGAGGGTGGTGCGCGAGAGTTCATTTTCTGCTCGCCTCAGTCATT
CCAGGACCATTGACCACGCTCACGTCAGTGTCAGTGGCATCGTTGTGAGC
ATGAGCGCGTGTGCGTGCTCATTGCCATGTACGATTGTCTGTACCGTTAA
ACCAGAATGGCAACACAACTACACGCCAAGCACCGAACAGGAAGGCTGGG
GGGTATGATGATGAACCCATTTGTTGAGACACAACAGCAGCAGTAGCACT
GCTGACTCGATTTCTCAATTATGGGGAGGTCCTTGACCAGGTGTACTTGG
GAGGTGGTTAGTCTTTCGTTGTGCGTGTCTTCTGACACGCCGATGTTGTT
ATCCATACCACCGTACGGCAATATTATCGGACTATCCTAGCGTATTTTTC
GTGCCTCTTTCCGCCGCCCCCACCCCCTCCGCAACCGTTACCAAACCCGT
CCGGACCCCCGTCTGACCCAGCGACCCATGAATCCCAACTCAACCCAACC
TTTGTTTGCTACCGTTCCCCCTGACGGTTCTTGTCTCATTCCATAATTTT
CTCGGCTGCCCAAACCGTCACTGGGACACCGCACGAAAACCCACTAAGCT
GGGGCATGGTGACGACCACAGCGTCGGTTCTCCTAGAGTGATCGAGGCCC
TGAAGACGGGAGAGGGTGATGCGGCCCTCGGACCCGTTTCCTGGGTTTCC
GCAGGAGGCATACATTCGGCGGCTGTGTTGGAGTGTGGGCGCGTTTTCAC
GTGGGGGGGGAGCAGCTACGGTCAGGTCTGCTGCTAGCTACTGGTATTGT
GGTGTTGAAGAGATGTAAGTTTGCCTGCTCTATCGCTCCTCTGTTATAGA
TCCCATTCACGCATCAAGCAGTACTCGTAACATCGAAAAGAGGTTCGCCT
GAGATTCCCGCAATTTTGATATGCGACGTTTCTTCATCATTACGGTAGCA
GCATCGACTGGAGCCTTGCCAGCCCACCAGTGGCATTGCTTCAGTGCAGC
AGCCTCAGTTGTTGGAAACGAACCTCCGATGAACAATAGCTTTGGACCTC
ATTCCCAACCAGAACAGAAGTTTTGATGGTAAGGTCTACAGACTGAAGGA
CGTCAGTCACGGTGCTTCGCGCTAATTGTGAGAGCCTGGTCCGGTGAGAA
CCCGGTGTGCTCCGTCCCGGCTTTGTAGGGATGCGAGGTCAAATGTCTAA
CGACTACGACATGGACCCCCACCTCCTTGCCCATGCATGACTGCGACAAC
CCCGTGCCCTCCTCGTCGCCACAGCTCGGGCTAGGCCCAGCGGTTACTAC
GCAGGGGATGCAGCCGTTGCCAGGGAAAGTGATGCTTTCGGAGACCGAAA
GTCCGCTTGGCTCCCCTCGCGTTAGCGCCACCGGGCTCACGAGGCACTCG
AGCATGACGCAGAAGGCGGCGGTTTTGGCGGTGAGAGGAGAGAAGAAATA
ACGGGCAGACAAAAGACGCTGTTGTTGTGACTTACGTCTTTGTGCTTGCT
GCGTGTCTGCTGTGCTCGTCGATGTTGTGCTATAGCCTTTATGATTGTTG
TGTGTCTGCTGAGGTCGTCGATGTTGTCTCGACGCCTTTGTGATTGATGT
GTGTCTACGGAGGTTGGTATCTACTGTCATTTGTCTTCGGGCAAGTCAGC
ACAATGATCCAGGACAGCTGTTCCGATACATGCTCTGTGTTGATGTGCCG
GAGTGCACGCTCCAAAGCTTGGCAAGGTCAAAGCCCGACTCAAACTCGCC
GTCGATGTTTGGGATCGGACTCTCTTGTCTGCGCCTTCGTTGTGGACACA
GCCTCCAAAGGAGAATAAACAGAGGAACAACAAGTTGCAGGAGTGAGATA
AGAAGATACAGAAAGAAAGAGAATCGAGACAGAGATATGCAGACAAGTCG
AAGAGAGAGGAGGGGGGGCGAGGGAGAGAGAGAACACGCGTTGCAGCGAA
GGTTGTTTGATAGACAACGCACCAGCGAACATCCACCCAGCTGTGTTGAG
AGGGAAGTTTAGTTTAGCTTTTCTGGGACGACATAAACTATTCTAACTTG
GGGGCTCTCACCGCTTCTTTAGCTTGTTCGACTTCTCCCCATCGACGCTA
CGCCTGTTTCTATCACTGGGTCATTTTTTATGTCAACTCACTCTACGTTG
CCTGGGGTACCTACCTTCCCGCCGCCGTGTTTCTTTTTTGTGACATGTCG
CGACGTTGCGTTGCCCTGCGCTGCCTCAGATGGAGACAGCCCCCAAGACA
GAGCTGCTGGCCAAGACTGTGGTCTGCGGAGGAATGCACACGGCCGCTCT
TACCTCCGAGGTGTTAACTCTTTGTCTTTAGTCGCGCTCTCGGGACGAAT
TTCTCCTCCTTGACCTTGTTCTGCTTACAGCACACGTCTTGTCTGCAAAA
CGCGCCGCTACCTAAGCACAATCTGGGAGGGAGTTGAGAAATGCAGGCTC
AAGAGGAGATAAAACTAACGAACTTGATAGTAGGAACAGGAGCTCAGTCA
AGAACCCTGCTGTATACTGAAACCTACTTACCTGTTCGGAAATATAGGGA
CAATTGTGGTATTCGCGCTTGTATCCGAATGGCCCTTACATTTTCATATT
GAGTGATATATAGTCGCTGTTGGTTTGCCGTATGGAGGAAATAAGAAGAT
GAGCCTCGGGTAACAAAAGTGGTTGTTAAATGAGTGGCGTGTGCTGTGCT
GTTCTGCCTGTAGTTCAGCTATAGTTTTTCGTACCCATGCCTCTAACCGC
GGAACATACCCTCCTCTATTTCGTCTTGTCCATGGAGTCGTTCGTAACTG
CTGCGGGACACGTGACACAGCATGTTGTTCACCAGAGACCTTAAGGGCGT
CTCTACCCTCTCTAGAAAGAACGACTGATCCCACCTTATTGTTTCCCAGG
ATCGATGTTCTCCCGGTCTAATGCGCACCTCCCTCCTAGAATACTGCTGT
AGTCCTAGAATAATTGTTTGCTAGCGCATCATCCTCTCGCAGCATTCAGG
AAGCCAGCTTGCGCTGCCCCTGTGCGCTGACTACTCAATTGTCCGTGACT
CTGGTGTAGGGAGTTGTGTACTGCTGGGGGCGTGCGGACAGCGGGCAGCT
GGGGATCGGCGCGGCATGGGTTCACGAGACTTCGTCGGGGGTGATGGGCG
TCGAGTGGCCGAGGAGGGTTCGCGGGTTGCTCGAAGGCCGCCGCACGGTG
AGGCGTCGCCTTGATGGTGTTGTTGTCCCGCGTTTGGAAGCCTTTGTAAT
CGACGGAGAAGCTGGTGAGATTTGTGTTTTGTGGGCACGCCACAAAGGTC
TCAGAGACAAAGCTATGAGGTAATTTCGGGAAAAAAATGGCTTGAAGCGT
GGGTAAGTTTACGTCTTTGTTTTTTCTATTGCGTGGTTTTGTCAAAGACA
TTTCGTGGTGCGGGCCGCGCGAGGGCAGTCAGGAGGAGCTTTGACGTGTG
TAGGTTATTCTTCTGTGGTGTTGTTGTTTTTTGTTGTTGTTGTTGTTGTT
GGTGGTGGTGGTGCTGCTGCTGCTGCTGCTGCTGCTGTTGTTGTTGTTGT
ACATGGATATGCATGACACCGACTAGTACCCTCCCGACCCCCCACGCCAA
TCATTTTCCCCGAAAAAAAAGGAATCGATCGCGTGCGGTGGTTTTCACAC
GGCGGCGGTGACCACGGATGGGGAGTGCTACACGTGGGGCAAGGAAGACT
TCGGGATGCTTGGCTGCAGCAACGCAGCCCTTCTGAAG

Coding sequence (CDS) from alignment at E-siliculosus-1a_F_contig1175:28456..35943+

>mRNA_E-siliculosus-1a_F_contig1175.1134.1 ID=mRNA_E-siliculosus-1a_F_contig1175.1134.1|Name=mRNA_E-siliculosus-1a_F_contig1175.1134.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=2118bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1175:28456..35943+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
ATGGCCTCCACCATGCTATTGCTTTGGGGCAAAAACGATGATGATGGCCT
CCACCATGCTATTGCTTTGGGGCAAAAACGATGATGGTCAGCTCGGCAGC
ACTTGCAAAAGCCTGTCTCGAGGGCATCTGGAGGATGAGAGCGCCAAGGT
CAGCTCGGCAGCACTTGCAAAAGCCTGTCTCGAGGGCATCTGGAGGATGA
GAGCGCCAAGGTGTCAACGCCACTGTCTCCTTCAGCACCCACGAGGATGG
GCGCCATGCGACCGGCGCCGGGCAGCGGCCGCGACTCGCGTGGCTCCACA
CCCCCACGCTCGGGCAACTTGGCCAGGTCCGCCGCAATGGGCAGCAGTTC
TACGGACGCCTTCGCCTGGACGGCCTCGCCTTGCAGGTGTCAACGCCACT
GTCTCCTTCAGCACCCACGAGGATGGGCGCCATGCGACCGGCGCCGGGCA
GCGGCCGCGACTCGCGTGGCTCCACACCCCCACGCTCGGGCAACTTGGCC
AGGTCCGCCGCAATGGGCAGCAGTTCTACGGACGCCTTCGCCTGGACGGC
CTCGCCTTGCAGAGCCCTCTCGGGCCTGGCGGTGTTGCAAGTTTCCTGCG
GGTCGAGACACACCCTGGCGACGGTTGAGGGGGGCGAGGCGTACAGCTGG
GGTTGGGGGGCCTGCGGACAGAGCCCTCTCGGGCCTGGCGGTGTTGCAAG
TTTCCTGCGGGTCGAGACACACCCTGGCGACGGTTGAGGGGGGCGAGGCG
TACAGCTGGGGTTGGGGGGCCTGCGGACAGCTGGGGCATGGTGACGACCA
CAGCGTCGGTTCTCCTAGAGTGATCGAGGCCCTGAAGACGGGAGAGGGTG
ATGCGGCCCTCGGACCCGTTTCCTGGGTTTCCGCAGGAGGCATACATTCG
GCGGCTGTGTTGGAGTGTGGGCGCGTTTTCACGTGGGGGGGGAGCAGCTA
CGGTCAGCTGGGGCATGGTGACGACCACAGCGTCGGTTCTCCTAGAGTGA
TCGAGGCCCTGAAGACGGGAGAGGGTGATGCGGCCCTCGGACCCGTTTCC
TGGGTTTCCGCAGGAGGCATACATTCGGCGGCTGTGTTGGAGTGTGGGCG
CGTTTTCACGTGGGGGGGGAGCAGCTACGGTCAGCTCGGGCTAGGCCCAG
CGGTTACTACGCAGGGGATGCAGCCGTTGCCAGGGAAAGTGATGCTTTCG
GAGACCGAAAGTCCGCTTGGCTCCCCTCGCGTTAGCGCCACCGGGCTCAC
GAGGCACTCGAGCATGACGCAGAAGGCGGCGGTTTTGGCGCTCGGGCTAG
GCCCAGCGGTTACTACGCAGGGGATGCAGCCGTTGCCAGGGAAAGTGATG
CTTTCGGAGACCGAAAGTCCGCTTGGCTCCCCTCGCGTTAGCGCCACCGG
GCTCACGAGGCACTCGAGCATGACGCAGAAGGCGGCGGTTTTGGCGATGG
AGACAGCCCCCAAGACAGAGCTGCTGGCCAAGACTGTGGTCTGCGGAGGA
ATGCACACGGCCGCTCTTACCTCCGAGATGGAGACAGCCCCCAAGACAGA
GCTGCTGGCCAAGACTGTGGTCTGCGGAGGAATGCACACGGCCGCTCTTA
CCTCCGAGGGAGTTGTGTACTGCTGGGGGCGTGCGGACAGCGGGCAGCTG
GGGATCGGCGCGGCATGGGTTCACGAGACTTCGTCGGGGGTGATGGGCGT
CGAGTGGCCGAGGAGGGTTCGCGGGTTGCTCGAAGGCCGCCGCACGGGAG
TTGTGTACTGCTGGGGGCGTGCGGACAGCGGGCAGCTGGGGATCGGCGCG
GCATGGGTTCACGAGACTTCGTCGGGGGTGATGGGCGTCGAGTGGCCGAG
GAGGGTTCGCGGGTTGCTCGAAGGCCGCCGCACGGAATCGATCGCGTGCG
GTGGTTTTCACACGGCGGCGGTGACCACGGATGGGGAGTGCTACACGTGG
GGCAAGGAAGACTTCGGGATGCTTGGCTGCAGCAACGCAGCCCTTCTGAA
GGAATCGATCGCGTGCGGTGGTTTTCACACGGCGGCGGTGACCACGGATG
GGGAGTGCTACACGTGGGGCAAGGAAGACTTCGGGATGCTTGGCTGCAGC
AACGCAGCCCTTCTGAAG