mRNA_E-siliculosus-1a_F_contig1175.1130.1 (mRNA) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E-siliculosus-1a_F_contig1175.1130.1
Unique NamemRNA_E-siliculosus-1a_F_contig1175.1130.1
TypemRNA
OrganismEctocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Homology
[Close]
BLAST of mRNA_E-siliculosus-1a_F_contig1175.1130.1 vs. uniprot
Match: A0A6H5KW77_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KW77_9PHAE)

HSP 1 Score: 1176 bits (3043), Expect = 0.000e+0
Identity = 844/992 (85.08%), Postives = 858/992 (86.49%), Query Frame = 1 
Query:  142 MSRAKGPKTGPXXXXXXXXXXXXXXXXXXXDADKHDPAKPKKARSAYNFYLLKRIAQLKEEGVVEQHRDRFAQAAGEWRDMTFGERIPYEDMAKADKERHQRDLDIATRNLNAALHGTVPKHGQGMCSAIGFPGLKALAANSPHEDVCAVCKEEGDLLCCDFCPSTYHLTCLDPPMLSLPSDDVQWACPACSASVEVAEMSAPQLKPKRERKDGRKRQRTS--TAAVAGSSSPRAGADAGGSFTIPKLKKPGKKRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXASSANSANRNRLVKAPQKAEISPRVGLGLTASTDEMSAATLRYPDLSGSRNNDKSPTKAMMSLAVAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKALGLKKLLHQRVQHDEANSNPAFSPKKLLKHRLLAAQQGTTXXXXXXXXXXXXXXXXXXXXXXXXNSYSRGLDDAGSADRYPGRAGERGASGGGRQDHGDVERQRSGFGGAXXXXXXXXXXXXXXXXXXXXXXXXXXXAKGELNGRVLADGGVHGRRNGTGGMNDNVGGRSDNNRGRHTDGGTAEGSGVGGGDRAALDGERRRRAELGVGGGYDAGRNGGANANGVHGREASRSXXXXXXXXXXXXXXXKGMNNAADKWTGGGESGRMDAPRPHGFSPAGFDEEGGRRQGRQPQYRGDSYASGRGDVTQQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-RSSWRPDRPSEGKREPDGRAQPRESAGRGGFADESRERQRRPRSREGEYANGGPPPPGSCSRSADDERDGRGRPPWGGDALRGGSRSRAADGGGDREKGFSAAGRAGGQHYGSSNGRVGDSAAXXXXXXXXCGRGEGGSYGGAWSDRKRSLERFEGQDWCHGSPKKHAPSPRTADAFRAESRGRPARWDDVRQNSGXXXXXXXRPDTREPSRDSRAPGEGGSRECRGSDARVCGTEASVGRARGS 3108
            MSRAKGPKTGP    XXXXXXXXXXXXXX DADKHDPAKPKKARSAYNFYLLKRIAQLKEEGVVE HRDRFAQAAGEWRDMTFGERIPYEDMAKADKERHQ+DLDIATRN NAALHGTVPKHGQGMCSAIGF GLKALAANSPHEDVCAVCKEEGDLLCCDFCPSTYHLTCLDPPMLSLP DDVQWACPACSA+VEVAEMSAPQLKPKRERKDGRKRQRTS  T AVA SSSPRAGADAGGSFTIPKLKKPGKKR  XXXXXXXXX           XXXXXXXXXXXXXXX SSANSANRNR++KAPQKAEISPRVGLGLTASTDEMSAATLRYPDLSGSRNNDKSPTKAMMSLAVAA XXXXXXXXXXXXXXXXXXXXXXXXXXXXXKALGLKKLLHQRVQHDEANSNPAFSPKKLLKHRLLAAQQ T           XXXXXXXXXXXXXX S SRG DDAGSADRY G+AGERG SGGGRQD GDVER+RSG+GGAXXXXXXXXXXXXXXXXXXXXXXXXXXX                   NGTGGM+ NVGGRSDNNRGRH D GTAEG+GV GGDRAALDGERRRRAE G GGGYDAGRNGG N NGVHGREASRS               KGMNNA DK TGGGESGRM+APR HGFSPA FDEEGGRRQGRQPQ RGDSY+SGRGD TQ XXXXXXXXXXXXXXXXXXXX XXXXXXXXXXXXXXXXXXXXXXXXX RSSWRPDR SEGK EPDGR QPRESAGRGGFADES ERQRRPRSREGE+ANGGPPP GSCSRSA DERDGRGRPPWGGDALRGGSR RAADG  DRE+G SAAGRAGGQHY SS GRVGDSAA         GRGEGGSYGGAWSDRKRSLERFEGQDW HGSPKKHAPSPRTADAFRAESRGR ARWDDVR NSGXXXXXXXRPD REP RDSRAP EGGSRE  GSDARV G     GR  G+
Sbjct:    1 MSRAKGPKTGPGSRGXXXXXXXXXXXXXXGDADKHDPAKPKKARSAYNFYLLKRIAQLKEEGVVELHRDRFAQAAGEWRDMTFGERIPYEDMAKADKERHQKDLDIATRNFNAALHGTVPKHGQGMCSAIGFSGLKALAANSPHEDVCAVCKEEGDLLCCDFCPSTYHLTCLDPPMLSLPPDDVQWACPACSANVEVAEMSAPQLKPKRERKDGRKRQRTSNATVAVAESSSPRAGADAGGSFTIPKLKKPGKKRNKXXXXXXXXXGEAKLSPRIVKXXXXXXXXXXXXXXXXSSANSANRNRMMKAPQKAEISPRVGLGLTASTDEMSAATLRYPDLSGSRNNDKSPTKAMMSLAVAAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKALGLKKLLHQRVQHDEANSNPAFSPKKLLKHRLLAAQQATITTSSDPAPSPXXXXXXXXXXXXXX-SLSRGSDDAGSADRYAGQAGERGGSGGGRQDDGDVERRRSGYGGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNGTGGMDGNVGGRSDNNRGRHADDGTAEGTGVAGGDRAALDGERRRRAEPG-GGGYDAGRNGGVNTNGVHGREASRSGWGSGSSGERNGRFAKGMNNATDKCTGGGESGRMEAPRHHGFSPAAFDEEGGRRQGRQPQRRGDSYSSGRGDATQXXXXXXXXXXXXXXXXXXXXXNXXXXXXXXXXXXXXXXXXXXXXXXXXRSSWRPDRLSEGKLEPDGRTQPRESAGRGGFADESCERQRRPRSREGEHANGGPPP-GSCSRSAGDERDGRGRPPWGGDALRGGSRPRAADGSSDRERGLSAAGRAGGQHYSSSKGRVGDSAAAVAGGG---GRGEGGSYGGAWSDRKRSLERFEGQDWSHGSPKKHAPSPRTADAFRAESRGRAARWDDVRPNSGXXXXXXXRPDNREPFRDSRAPSEGGSREGHGSDARVEGASEVTGRILGA 986
[Close]
BLAST of mRNA_E-siliculosus-1a_F_contig1175.1130.1 vs. uniprot
Match: D7FS64_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FS64_ECTSI)

HSP 1 Score: 1137 bits (2940), Expect = 0.000e+0
Identity = 802/910 (88.13%), Postives = 818/910 (89.89%), Query Frame = 1 
Query:  142 MSRAKGPKTGPXXXXXXXXXXXXXXXXXXXDADKHDPAKPKKARSAYNFYLLKRIAQLKEEGVVEQHRDRFAQAAGEWRDMTFGERIPYEDMAKADKERHQRDLDIATRNLNAALHGTVPKHGQGMCSAIGFPGLKALAANSPHEDVCAVCKEEGDLLCCDFCPSTYHLTCLDPPMLSLPSDDVQWACPACSASVEVAEMSAPQLKPKRERKDGRKRQRTSTAAVAGSSSPRAGADAGGSFTIPKLKKPGKKRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXASSANSANRNRLVKAPQKAEISPRVGLGLTASTDEMSAATLRYPDLSGSRNNDKSPTKAMMSLAVAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKALGLKKLLHQRVQHDEANSNPAFSPKKLLKHRLLAAQQGTTXXXXXXXXXXXXXXXXXXXXXXXXNSYSRGLDDAGSADRYPGRAGERGASGGGRQDHGDVERQRSGFGGAXXXXXXXXXXXXXXXXXXXXXXXXXXXAKGELNGRVLADGGVHGRRNGTGGMNDNVGGRSDNNRGRHTDGGTAEGSGVGGGDRAALDGERRRRAELGVGGGYDAGRNGGANANGVHGREASRSXXXXXXXXXXXXXXXKGMNNAADKWTGGGESGRMDAPRPHGFSPAGFDEEGGRRQGRQPQYRGDSYASGRGDVTQQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRSSWRPDRPSEGKREPDGRAQPRESAGRGGFADESRERQRRPRSREGEYANGGPPPPGSCSRSADDERDGRGRPPWGGDALRGGSRSRAADGGGDREKGFSAAGRAGGQHYGSSNGRVGDSAAXXXXXXXXCGRGEGGSYGGAWSDRKRSLERFEGQDWCHGSPKK 2871
            MSRAKGPKTGP    XXXXXXXXXXXXXX DADKHDPAKPKKARSAYNFYLLKRIAQLKEEGVVEQHRDRFAQAAGEWRDMTFGERIPYEDMAKADKERHQ+DLDIATRNLNAALHGTVPKHGQGMCSAIGFPGLKALAANSPHEDVCAVCKEEGDLLCCDFC STYHLTCLDPPMLSLPSDDVQWACPACSAS+EVAEMSAPQLKPKRERKDGRKRQRTSTAAVAGSSSPRAGADAGG+FTIPKLKKPGKKR XXXXXXXXXX           XXXXXXXXXXXXXX ASSANSANRNR+VKAPQKAEISPRVGLGLTASTDEMSAATLRYPDLSGSRNNDKSPTKAMMSLAVAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXX KALGLKKLLHQRVQHDEANSNPAFSPKKLLKHRLLAAQQ   XXXXXXXXXXXXXXXXXXXXXXX NSYSRG DDAGSADRY G++GERGASG         + +RSGF GA                           A+GELNGRVLADG  +GRRNGTGGMNDNVGGRS+NNRGRH D GTAEGSGVGGGDRAALDGERRRRAELG GGGYDAGRNG ANANGVHGREASRSXXXXXXXXXXXXXXX  MNN  DKWTGGGESGRMDAPR HGFSPAGF+EEGGRRQGRQPQYRGDSY+SG+GD TQQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX RSSWRPDRPSEGKREPDGR Q RESAGRGGF DESRERQRRPRSREGEYANG  P PGSCSRS DDERDGRGRPPWGG+ALRGGSRSRAADGGGDRE+GFSAAGRAGGQHYGSSNGRVGDSAA    XX   GRGEGGSYGGAWSDRKRSLERFEGQDW HGSPKK
Sbjct:    1 MSRAKGPKTGPGSRGXXXXXXXXXXXXXXGDADKHDPAKPKKARSAYNFYLLKRIAQLKEEGVVEQHRDRFAQAAGEWRDMTFGERIPYEDMAKADKERHQKDLDIATRNLNAALHGTVPKHGQGMCSAIGFPGLKALAANSPHEDVCAVCKEEGDLLCCDFCTSTYHLTCLDPPMLSLPSDDVQWACPACSASIEVAEMSAPQLKPKRERKDGRKRQRTSTAAVAGSSSPRAGADAGGNFTIPKLKKPGKKRNXXXXXXXXXXGEAKLSPRIVKXXXXXXXXXXXXXXLASSANSANRNRMVKAPQKAEISPRVGLGLTASTDEMSAATLRYPDLSGSRNNDKSPTKAMMSLAVAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-KALGLKKLLHQRVQHDEANSNPAFSPKKLLKHRLLAAQQAXXXXXXXXXXXXXXXXXXXXXXXXX-NSYSRGSDDAGSADRYAGQSGERGASG--------AKWRRSGFAGAYAGDSGRNAGPYGGREARGSDERDRIAAEGELNGRVLADGAGYGRRNGTGGMNDNVGGRSENNRGRHADDGTAEGSGVGGGDRAALDGERRRRAELG-GGGYDAGRNGDANANGVHGREASRSXXXXXXXXXXXXXXXXXMNNPTDKWTGGGESGRMDAPRHHGFSPAGFEEEGGRRQGRQPQYRGDSYSSGQGDATQQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-RSSWRPDRPSEGKREPDGRTQLRESAGRGGFTDESRERQRRPRSREGEYANG-VPQPGSCSRSVDDERDGRGRPPWGGNALRGGSRSRAADGGGDRERGFSAAGRAGGQHYGSSNGRVGDSAAAVAGXX---GRGEGGSYGGAWSDRKRSLERFEGQDWSHGSPKK 894
[Close]
BLAST of mRNA_E-siliculosus-1a_F_contig1175.1130.1 vs. uniprot
Match: UPI000852357D (chromodomain-helicase-DNA-binding protein Mi-2 homolog n=1 Tax=Cyphomyrmex costatus TaxID=456900 RepID=UPI000852357D)

HSP 1 Score: 70.9 bits (172), Expect = 3.990e-11
Identity = 31/67 (46.27%), Postives = 40/67 (59.70%), Query Frame = 1 
Query:  520 CSAIGFPGLKALAANSP-HEDVCAVCKEEGDLLCCDFCPSTYHLTCLDPPMLSLPSDDVQWACPACS 717
            C+  G  G+   A +   H + C VCK+ G+LLCCD C S YH  CL+PP+  +P DD  W CP CS
Sbjct:   11 CAHCGGEGIAGAAEDDDEHMEFCRVCKDGGELLCCDSCTSAYHTHCLNPPLSEIPDDD--WKCPRCS 75
[Close]
BLAST of mRNA_E-siliculosus-1a_F_contig1175.1130.1 vs. uniprot
Match: A0A1B6FPQ0_9HEMI (PHD-type domain-containing protein (Fragment) n=1 Tax=Cuerna arida TaxID=1464854 RepID=A0A1B6FPQ0_9HEMI)

HSP 1 Score: 69.7 bits (169), Expect = 2.610e-10
Identity = 27/49 (55.10%), Postives = 34/49 (69.39%), Query Frame = 1 
Query:  571 HEDVCAVCKEEGDLLCCDFCPSTYHLTCLDPPMLSLPSDDVQWACPACS 717
            H++ C VCK+ G+LLCCD CPS YH  CL+PP+  +P  D  W CP CS
Sbjct:   25 HQEFCRVCKDGGELLCCDSCPSAYHTFCLNPPLKEIPDGD--WKCPRCS 71
[Close]
BLAST of mRNA_E-siliculosus-1a_F_contig1175.1130.1 vs. uniprot
Match: A0A1W4VIZ2_DROFC (chromodomain-helicase-DNA-binding protein 3 n=1 Tax=Drosophila ficusphila TaxID=30025 RepID=A0A1W4VIZ2_DROFC)

HSP 1 Score: 76.3 bits (186), Expect = 4.480e-10
Identity = 33/59 (55.93%), Postives = 38/59 (64.41%), Query Frame = 1 
Query:  538 PGLKALAANSPHEDVCAVCKEEGDLLCCDFCPSTYHLTCLDPPMLSLPSDDVQWACPAC 714
            P  KA  +    E+ C VCK+ GDLLCCD CP  YHLTCLDPP+ S+P  D  W CP C
Sbjct:   14 PQNKAKKSKLSDEEFCRVCKDGGDLLCCDSCPLVYHLTCLDPPLKSIPKGD--WTCPRC 70
[Close]
BLAST of mRNA_E-siliculosus-1a_F_contig1175.1130.1 vs. uniprot
Match: A0A161MDI2_TRIIF (Chromodomain-helicase-dna-binding protein mi-2-like protein isoform x2 (Fragment) n=1 Tax=Triatoma infestans TaxID=30076 RepID=A0A161MDI2_TRIIF)

HSP 1 Score: 71.6 bits (174), Expect = 1.180e-9
Identity = 28/50 (56.00%), Postives = 35/50 (70.00%), Query Frame = 1 
Query:  571 HEDVCAVCKEEGDLLCCDFCPSTYHLTCLDPPMLSLPSDDVQWACPACSA 720
            H++ C VCK+ G+LLCCD CPS YH  CL+PP+  +P  D  W CP CSA
Sbjct:    6 HQEFCRVCKDGGELLCCDSCPSAYHTFCLNPPLTDIPDGD--WKCPRCSA 53
[Close]
BLAST of mRNA_E-siliculosus-1a_F_contig1175.1130.1 vs. uniprot
Match: B3NID0_DROER (Chd3 n=2 Tax=Drosophila erecta TaxID=7220 RepID=B3NID0_DROER)

HSP 1 Score: 74.3 bits (181), Expect = 1.780e-9
Identity = 31/59 (52.54%), Postives = 38/59 (64.41%), Query Frame = 1 
Query:  538 PGLKALAANSPHEDVCAVCKEEGDLLCCDFCPSTYHLTCLDPPMLSLPSDDVQWACPAC 714
            P +KA+      E+ C VC++ GDLLCCD CPS YH TCL PP+ S+P  D  W CP C
Sbjct:   30 PKVKAMKRKFREEEYCRVCRDGGDLLCCDSCPSVYHRTCLTPPLKSIPKGD--WICPRC 86
[Close]
BLAST of mRNA_E-siliculosus-1a_F_contig1175.1130.1 vs. uniprot
Match: A0A8J1XQY5_OWEFU (Ofus.G053349 protein (Fragment) n=1 Tax=Owenia fusiformis TaxID=6347 RepID=A0A8J1XQY5_OWEFU)

HSP 1 Score: 67.0 bits (162), Expect = 2.120e-9
Identity = 27/49 (55.10%), Postives = 33/49 (67.35%), Query Frame = 1 
Query:  571 HEDVCAVCKEEGDLLCCDFCPSTYHLTCLDPPMLSLPSDDVQWACPACS 717
            H + C VCK+ G+LLCCD CPS YH  CL+PP+  LP  D  W CP C+
Sbjct:   35 HMEFCRVCKDGGELLCCDSCPSAYHTHCLNPPITGLP--DGTWVCPRCN 81
[Close]
BLAST of mRNA_E-siliculosus-1a_F_contig1175.1130.1 vs. uniprot
Match: UPI001885BB48 (autoimmune regulator n=1 Tax=Syngnathus acus TaxID=161584 RepID=UPI001885BB48)

HSP 1 Score: 72.0 bits (175), Expect = 2.130e-9
Identity = 30/60 (50.00%), Postives = 40/60 (66.67%), Query Frame = 1 
Query:  544 LKALAANSPHEDVCAVCKEEGDLLCCDFCPSTYHLTCLDPPMLSLPSDDVQWACPACSAS 723
            + A   N  ++D CAVCK+ G+L+CCD CP  +HLTCLDPP+ S+PS    W C  CS +
Sbjct:  158 IAASGQNHHNDDDCAVCKDGGELICCDGCPRAFHLTCLDPPLASVPSGS--WCCKDCSGT 215
[Close]
BLAST of mRNA_E-siliculosus-1a_F_contig1175.1130.1 vs. uniprot
Match: A0A811KH98_9BILA (Hypothetical protein n=1 Tax=Bursaphelenchus okinawaensis TaxID=465554 RepID=A0A811KH98_9BILA)

HSP 1 Score: 74.3 bits (181), Expect = 2.240e-9
Identity = 30/67 (44.78%), Postives = 40/67 (59.70%), Query Frame = 1 
Query:  520 CSAIGFPGLKALAANSPHEDVCAVCKEEGDLLCCDFCPSTYHLTCLDPPMLSLPSDDVQWACPACSA 720
            C   G P  K +     + + C  CKE G +LCCD CPS+YH+ C+DPP+  LP  +  WACP C+A
Sbjct:  273 CETEGVP-KKEIEEKKGNMEYCRACKEGGSILCCDSCPSSYHVYCIDPPLEELPPSEEHWACPRCTA 338
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig1175.1130.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KW77_9PHAE0.000e+085.08Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FS64_ECTSI0.000e+088.13Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
UPI000852357D3.990e-1146.27chromodomain-helicase-DNA-binding protein Mi-2 hom... [more]
A0A1B6FPQ0_9HEMI2.610e-1055.10PHD-type domain-containing protein (Fragment) n=1 ... [more]
A0A1W4VIZ2_DROFC4.480e-1055.93chromodomain-helicase-DNA-binding protein 3 n=1 Ta... [more]
A0A161MDI2_TRIIF1.180e-956.00Chromodomain-helicase-dna-binding protein mi-2-lik... [more]
B3NID0_DROER1.780e-952.54Chd3 n=2 Tax=Drosophila erecta TaxID=7220 RepID=B3... [more]
A0A8J1XQY5_OWEFU2.120e-955.10Ofus.G053349 protein (Fragment) n=1 Tax=Owenia fus... [more]
UPI001885BB482.130e-950.00autoimmune regulator n=1 Tax=Syngnathus acus TaxID... [more]
A0A811KH98_9BILA2.240e-944.78Hypothetical protein n=1 Tax=Bursaphelenchus okina... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_F_contig1175contigE-siliculosus-1a_F_contig1175:1051..9111 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef902022-09-19
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female2021-02-24
Properties
Property NameValue
Start1
Stop1
Cds size4728
Model size4728
Exons6
Hectar predicted targeting categoryother localisation
Best eggNOG OGNA|NA|NA
Best tax levelEukaryota
COG Functional cat.KL
EggNOG OGsCOG0553@1,KOG0383@2759
EggNOG free text desc.peripheral T cell tolerance induction
Seed eggNOG ortholog2880.D7FS64
Seed ortholog evalue0.0
Seed ortholog score1157.1
Taxonomic scopeEukaryota
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_F_contig1175.1130.1prot_E-siliculosus-1a_F_contig1175.1130.1Ectocarpus siliculosus Ec863f_EcPH12_90f femalepolypeptideE-siliculosus-1a_F_contig1175 1051..9111 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927695.4138157-CDS-E-siliculosus-1a_F_contig1175:1050..29071622927695.4138157-CDS-E-siliculosus-1a_F_contig1175:1050..2907Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1175 1051..2907 -
1696318641.4250383-CDS-E-siliculosus-1a_F_contig1175:1050..29071696318641.4250383-CDS-E-siliculosus-1a_F_contig1175:1050..2907Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1175 1051..2907 -
1622927695.4293575-CDS-E-siliculosus-1a_F_contig1175:3325..55121622927695.4293575-CDS-E-siliculosus-1a_F_contig1175:3325..5512Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1175 3326..5512 -
1696318641.4360461-CDS-E-siliculosus-1a_F_contig1175:3325..55121696318641.4360461-CDS-E-siliculosus-1a_F_contig1175:3325..5512Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1175 3326..5512 -
1622927695.4397714-CDS-E-siliculosus-1a_F_contig1175:5892..60681622927695.4397714-CDS-E-siliculosus-1a_F_contig1175:5892..6068Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1175 5893..6068 -
1696318641.446688-CDS-E-siliculosus-1a_F_contig1175:5892..60681696318641.446688-CDS-E-siliculosus-1a_F_contig1175:5892..6068Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1175 5893..6068 -
1622927695.4536474-CDS-E-siliculosus-1a_F_contig1175:6365..65611622927695.4536474-CDS-E-siliculosus-1a_F_contig1175:6365..6561Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1175 6366..6561 -
1696318641.4547732-CDS-E-siliculosus-1a_F_contig1175:6365..65611696318641.4547732-CDS-E-siliculosus-1a_F_contig1175:6365..6561Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1175 6366..6561 -
1622927695.4683752-CDS-E-siliculosus-1a_F_contig1175:7097..73521622927695.4683752-CDS-E-siliculosus-1a_F_contig1175:7097..7352Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1175 7098..7352 -
1696318641.462704-CDS-E-siliculosus-1a_F_contig1175:7097..73521696318641.462704-CDS-E-siliculosus-1a_F_contig1175:7097..7352Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1175 7098..7352 -
1622927695.4799008-CDS-E-siliculosus-1a_F_contig1175:9054..91111622927695.4799008-CDS-E-siliculosus-1a_F_contig1175:9054..9111Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1175 9055..9111 -
1696318641.4743042-CDS-E-siliculosus-1a_F_contig1175:9054..91111696318641.4743042-CDS-E-siliculosus-1a_F_contig1175:9054..9111Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1175 9055..9111 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E-siliculosus-1a_F_contig1175.1130.1

>prot_E-siliculosus-1a_F_contig1175.1130.1 ID=prot_E-siliculosus-1a_F_contig1175.1130.1|Name=mRNA_E-siliculosus-1a_F_contig1175.1130.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=1576bp
MDDEETQFLLDDEDEKPRKEKNQKKTPASPKSKDKETAAVVQAGTAGMSR
AKGPKTGPGSRGGKGGKGAKVGAGAKGDADKHDPAKPKKARSAYNFYLLK
RIAQLKEEGVVEQHRDRFAQAAGEWRDMTFGERIPYEDMAKADKERHQRD
LDIATRNLNAALHGTVPKHGQGMCSAIGFPGLKALAANSPHEDVCAVCKE
EGDLLCCDFCPSTYHLTCLDPPMLSLPSDDVQWACPACSASVEVAEMSAP
QLKPKRERKDGRKRQRTSTAAVAGSSSPRAGADAGGSFTIPKLKKPGKKR
NKAAAAAAGEESEAKLSPRIVKREEEKDELTTAAAVLASSANSANRNRLV
KAPQKAEISPRVGLGLTASTDEMSAATLRYPDLSGSRNNDKSPTKAMMSL
AVAAASVAANEAAIAAAVAAAAAAAPAAAPPPPPKALGLKKLLHQRVQHD
EANSNPAFSPKKLLKHRLLAAQQGTTTTSSSDPAPSPSPPASSPSTGGGG
NSYSRGLDDAGSADRYPGRAGERGASGGGRQDHGDVERQRSGFGGAYAGE
SGRSAGPYGGREARGSDERDRIAAKGELNGRVLADGGVHGRRNGTGGMND
NVGGRSDNNRGRHTDGGTAEGSGVGGGDRAALDGERRRRAELGVGGGYDA
GRNGGANANGVHGREASRSGWGAGSSGERNGRFAKGMNNAADKWTGGGES
GRMDAPRPHGFSPAGFDEEGGRRQGRQPQYRGDSYASGRGDVTQQRRDDG
GGERRDSSSSGGRGYNNKASALAPPPPPPHCWDGGGGGGGGRSSWRPDRP
SEGKREPDGRAQPRESAGRGGFADESRERQRRPRSREGEYANGGPPPPGS
CSRSADDERDGRGRPPWGGDALRGGSRSRAADGGGDREKGFSAAGRAGGQ
HYGSSNGRVGDSAAAAAAAGGGCGRGEGGSYGGAWSDRKRSLERFEGQDW
CHGSPKKHAPSPRTADAFRAESRGRPARWDDVRQNSGGGGGGGGRPDTRE
PSRDSRAPGEGGSRECRGSDARVCGTEASVGRARGSGGGGGGEQTAAPWV
GRGGERSDRRDSGGSSTRAPEHGGARDGPSSSRGGSEGAAWQDAAGGRGG
HHNHHRQGGGGGGGGGGVGARGRGAVRGHWKARLAGGRGGSDFAQRGHQV
EGDRAREPSIAAQQSGGRDNGWPERAGGGSASRNDGNGGDPAAGSRQAGR
SEEPRAGGGRSGERGREAGASVHAPGSRYDSQARGSSAGPGGVGADRRTK
GPTDFRYGQAAAANGGAGGGGGGRGAGSRKEKDYSGFALPKPGAPPHASS
SAGPPASSSAATTTTSASVSVSRPDRSARSQEFGQDNHQQQQQQQQNRSM
ARPNGGGRGGGNGGGSQSSFRPRGMSERVGGRGFRQEGDGGGGVAKDFQA
SRGDGVNGRGNYSRSSARSLSPPAASRSARRSSASPNGRQQGYKRQGNSG
PDAYSPSGGGGDDAYQRSGKPRPGWESSGMGRGGAGGRRPWKGRGEYHHH
SNGGKEEERYGNNSGRASNNSNGRFQNSDHRSRGNFPGRGEGGGFGGRGR
GWGGGGGGGGGGGRFDNRSDNGSNS*
back to top

mRNA from alignment at E-siliculosus-1a_F_contig1175:1051..9111-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E-siliculosus-1a_F_contig1175.1130.1 ID=mRNA_E-siliculosus-1a_F_contig1175.1130.1|Name=mRNA_E-siliculosus-1a_F_contig1175.1130.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=8061bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1175:1051..9111- (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
ATGGACGACGAAGAGACGCAGTTTTTGCTCGACGACGAGGACGAAAAGCC
CAGGAAGGTGGGACTCCTCGCCTGCCCTTTTATCTTACTTTATTTTGGCG
CAGGGGGTGGGGGCGTTTTGGTTGGTTTTGCTCGGAGCAGAGATCAGAGG
TGTCGGAGAGTGCCCTTGACCATGCAACTGGTGATCGGGAGGTGCAAAAC
CTAGAGTCGTATGCCGACAGACTCGCGAGCTTTGGTAATGGCGCCGCCTG
CGAGAGGAGTAGAGTATGTTGTCGTGGTTGTCGGCGTCGTCCCGATTCTC
GCTTGCCCAGTGGCGCGGGGTCATGAGGAGCACAGCCAGGCAATAGGTGT
GCTGACTGGGTTTGCAGCGCGCCCCGTCTGTTGGTACGCACGACAGGCAG
GGATCACCGGGGAGGCAGAATGCTGTTGCCGACCTATGCTTTTCTAGGGT
CTTTCTGCATCGCAGTGATGGAGGTGTTGGTTGAATAGAAGTGCCTCCAT
ATGGGGAGGGTCAATGATGCCCTCTCAATTTTTCAATCAAAGCCATCAAC
AGACAGCGATGATGCCACGTTTGCTCCACACGACAACTACGAACTCCCAT
TAGCAGTCGGTTGCCCCATAGGCTGCTTGTGAGGTGAACTCTCTCGTGTT
ATAGGTAGAGCTGCAGAGAGGGGAGTATCCCCCATTCGATATCCTGACGA
CTCCTGCTGTGTGGCTGCAGACATAGAGCCGGGACATACAAGTAGGACCA
CGGACCACGCAAAATGGAACCTGACGGATGGTACTCCATGTACTGCTGTA
ACGTATGTAGTACCAGGTTTGTTGGCGCCACCCGTAAAACCCGACCCATG
ACACGAGCACGCACCAGCTCTGCCTAGCCCGTCGCAGGGTAGCGTAGGCA
TACCGTTTAGAACAGCCTCATTCTCGAGGAAAGGCATGGATGCACCAGCA
TGATGTAGAATCCCGCAGTGCGCACAACTCCTCTCGAACAGGTATAGTAG
CAGTTACCCCCGAGCAGCGACGACGAGATCAAATACAGCAGTAACCCCTC
TACAATAGCAGCCCCCGATTCGAGCGGTGATGGGGAGGGACGCACGTTAT
TTGGAGATGGGACAAGCGACGACGGCGCAGCGTCACGAGTATGTCAAAGT
TCCGTTCTCGACTTCATATATATTTTTCCTCTCACATTCACACTACCAGA
TACAGCAGTATTAAGGAAACAGCGTGGGAACGTATGATACGGACACATGC
CAGTTATGTATTTATTTTTCCTACAGCAGTAGTGCCAGTTTTGACGGGTT
TGTTTACTTCTACGCATCTACGCATGCCATAACTTTCGCTTTGCCCTTCG
CATGGCCTTGTCTGAGACAACGTGTGTACAATATGACGATCACATCGAGC
TGTGGGTGGTTCAAGATAACCTTGACCGAAAACAATCCGCCTTCAATATC
GTGGCGCCCCCTCGCCTTGGCAACAACCTTCGCCAAAGTATTCTGTAAAA
CGGGTGTTGCTTGTATCGTCATTTGACTGTTGTTAATTTTGAGATATGTT
ACCGAGTACATAGTCCGCGGCTCATATGCATAGACATCGGAAGGAAAATG
CGAACTATTACAACGAAGAAATCGCCGTAGTACCCCACTTGCCAAAACGT
ACCTCGAAGTACAGCAACATCACATGGTCACGTCTCCGTCCATGAGTCCA
CGAGCACCACCTATCCTACCACAAATATTTATTTACTATCTGCGACCCAT
CCGCCCCAGGAAAAGAATCAGAAGAAGACCCCGGCATCTCCGAAGTCGAA
GGACAAAGAGACGGCCGCTGTAGTTCAGGCGGGAACAGCAGGAATGAGCC
GAGCGAAGGGGCCAAAGACCGGGCCAGGTAGCCGGGGGGGAAAGGGCGGC
AAGGGGGCCAAGGTCGGGGCGGGGGCGAAGGGAGATGCGGACAAGCACGA
CCCAGCTAAACCGAAGAAGGCTCGGAGCGCTTACAACTTTTATCTGCTCA
AGCGGATAGCCCAGGTATGTAGGCGCCGTTGATTGTTGTTGTCGTCGTCG
TTTGGTGGAGAGGGCGCCGTGTTGATGCCGTCGCTGCGCCTGCCGTTAGT
GTCGGTGTTTTGTCATATGGCTCCCGACCACTACTGTGTGGGGTTGCGGT
GCTTGTTGCTTTCAGGCGCGCAGACGCCGGTATAGCGTCGACGCTCCCTT
TGTTAGGTCTTGTCTGTTTTTCGCTGCTCTTTGGTCGTGCGCGTCGCTCT
CAAAGGTTGGACTCGGTGCAGTTTCGTCCCGGTACAGAGTGTTTGTGTTG
TACACCGAGGCGCGCAGGGTTACGCGATATCTTCTTCGCACGTAAATACA
TCCACGGTTGAAAGGTGCTTACGTGCTGTGCACAGATACCATGCGAATCA
GAGAATGACAAATTGTTTGTAGTGGTCGTATCGCCCTTCCTTCCAAACTC
CACCAACGGTGCGTCGGATGCTTGTTGGTACGACCACCGTACGACATGTA
CAATGCACGTCATTCTGAAACCGCTATGTACCGATACGTTTCGCCATCAG
CTTAAGGAGGAGGGTGTGGTGGAGCAGCACCGGGACCGTTTCGCCCAGGC
GGCCGGCGAATGGCGGGACATGACCTTCGGCGAGCGGATCCCGTACGAGG
ATATGGCAAAGGCGGACAAGGAGCGGCACCAGAGGGACCTAGACATCGCC
ACCAGGAACCTTAACGCGGCACTTCATGGCACCGTTCCGAAGCACGGTCA
GTGTGCGGGTGCCTTGCCGTGACGCTCGACCTTGGCGCTTTTTTTATTTT
TTCATTGTCCTTGATTTCAATCGTGTTCATCCTCGCTTGAACCCACAGGC
GGTCTCTGTTGTCTAAGACGTTCTTTGCTTTTGAACGTCGTCTGCGCGTA
GGTATTGCGCTACAGCGCCACTCCGACTCGTCTAGTTTTATGACTGTTGA
GTTCGATCGATTTTTGTGGCACGTGTCCCCCTACCACGATCTCGATCTCG
TGTTTGTTGCAATTTTCCTGCTTGTCGACGACAAATGTTTCAGGGCAGGG
AATGTGCTCCGCCATCGGCTTCCCAGGGCTTAAGGCGCTGGCCGCGAACT
CCCCTCACGAAGACGTGTGCGCGGTGTGCAAGGAGGAAGGGGACCTCCTT
TGCTGCGACTTTTGCCCCTCCACGTACCACCTGACCTGTCTGGACCCTCC
CATGCTATCCCTGCCCTCGGTGAGTGCGTTTTTTGTGCTTTCTCGCTTCA
TATGTTAGCACGACGGCGCGTTGTGTTCAACGCGTAGCATTGTTTTGGGC
GGAACCGTTGATTTCCCTTGCTGTCTTGGTATAGACGGAATGTGCGTTGG
CGTCAGATACTGCTGTGACGTTGTTGCTGACATCGTCTGGTGTTTTTCTC
TCTGCGCGGTCATCCTCGTGGGCCAGCCATATGTCGCAGCCGGGCTGACC
TTAATGGGTGTAAACCATTGCTGCCCACAAACCTCTTCGCATCCATTTAC
GGCCAATTGATGAAACTCTTTCCAGGACATTGTTTCCACGTGCTGAGTGG
TCCACACCACGTTTTTTTTTGCATGTTTTTGTTTCTGCCGCTGTTGCAGG
ACGATGTCCAGTGGGCGTGCCCCGCTTGCTCCGCGAGCGTCGAGGTCGCC
GAGATGTCTGCGCCGCAGCTGAAGCCGAAAAGGGAGCGCAAGGACGGGCG
GAAGCGGCAGCGGACGAGCACCGCCGCGGTGGCGGGGTCGTCATCGCCCA
GAGCCGGCGCTGATGCCGGCGGCAGCTTCACCATCCCGAAGCTCAAGAAG
CCAGGGAAGAAACGGAACAAGGCGGCGGCTGCGGCGGCCGGCGAAGAGAG
TGAAGCGAAGTTGTCGCCGAGGATAGTAAAGCGGGAGGAGGAGAAGGACG
AGCTGACGACGGCAGCGGCGGTCCTTGCATCGAGCGCCAACTCGGCGAAC
AGGAACCGGTTGGTGAAGGCTCCCCAGAAGGCGGAAATCTCGCCGCGGGT
GGGGCTCGGGCTGACGGCTTCTACGGACGAGATGTCGGCGGCGACGCTAC
GCTACCCGGACTTGAGCGGGAGCCGGAACAATGACAAGAGCCCGACGAAG
GCGATGATGTCTCTTGCCGTGGCTGCGGCGTCTGTGGCCGCGAACGAGGC
GGCGATCGCGGCGGCGGTGGCAGCGGCGGCGGCGGCTGCGCCGGCGGCCG
CCCCGCCCCCGCCGCCCAAGGCCCTCGGCCTCAAGAAGTTGCTCCACCAG
CGTGTCCAGCACGACGAGGCTAACTCCAATCCCGCCTTCTCGCCCAAGAA
GCTGCTCAAGCACCGCCTGCTGGCAGCGCAGCAAGGTACTACTACTACGT
CTTCCTCCGACCCGGCGCCTTCCCCTTCCCCCCCGGCGTCCAGTCCTAGC
ACGGGAGGAGGAGGAAATAGCTACAGCCGTGGTTTGGATGACGCTGGTTC
TGCTGACAGGTACCCGGGGCGAGCCGGCGAGCGAGGGGCAAGCGGCGGTG
GGCGGCAAGACCACGGAGACGTGGAGCGGCAGCGGTCGGGCTTTGGCGGT
GCGTATGCGGGGGAATCGGGCCGGAGTGCTGGGCCTTACGGCGGACGCGA
GGCAAGAGGCAGTGACGAAAGGGACAGGATCGCCGCCAAGGGCGAATTGA
ACGGCAGGGTGCTGGCGGACGGCGGGGTGCACGGCAGGCGGAATGGCACG
GGCGGGATGAACGACAACGTGGGTGGTCGGAGCGACAACAACCGTGGGCG
ACACACGGATGGTGGCACCGCCGAGGGCAGTGGTGTTGGCGGCGGCGACC
GCGCTGCTTTGGACGGCGAGCGGCGTCGCAGAGCGGAACTTGGCGTCGGC
GGTGGGTATGACGCGGGAAGGAATGGGGGTGCCAATGCTAACGGGGTACA
TGGGAGGGAAGCTTCCCGCAGCGGTTGGGGGGCGGGGTCGTCCGGAGAGA
GAAATGGGAGGTTCGCCAAGGGCATGAACAACGCCGCCGACAAGTGGACG
GGCGGGGGGGAGTCAGGAAGGATGGACGCACCGCGGCCTCACGGTTTCAG
CCCCGCTGGTTTCGACGAAGAGGGCGGCCGTAGACAAGGCAGACAGCCGC
AATACCGCGGCGATTCTTACGCGAGTGGCCGGGGAGATGTCACACAGCAG
CGCCGCGATGACGGAGGAGGGGAGCGGCGTGACAGTAGCAGTTCCGGTGG
GAGAGGCTACAACAACAAGGCTTCGGCCTTGGCGCCGCCGCCGCCGCCAC
CCCACTGCTGGGACGGCGGCGGCGGCGGCGGCGGCGGCCGGAGCAGTTGG
CGACCCGACCGTCCGTCCGAGGGCAAACGAGAACCGGACGGGAGAGCACA
GCCGAGGGAATCAGCAGGCAGGGGGGGCTTTGCAGACGAGAGCCGTGAGC
GTCAACGGAGGCCCCGTAGCCGAGAAGGAGAGTACGCTAACGGCGGGCCG
CCGCCGCCTGGCTCGTGCTCCAGGTCTGCCGACGACGAGCGGGACGGGAG
AGGCCGGCCGCCGTGGGGGGGCGACGCGCTTAGGGGTGGCAGCCGCTCCC
GTGCGGCCGATGGCGGCGGCGACAGGGAGAAAGGGTTTTCCGCTGCCGGG
AGGGCGGGCGGTCAACACTACGGCAGCAGCAACGGGAGGGTTGGAGATTC
CGCCGCCGCCGCCGCCGCCGCCGGTGGTGGTTGTGGCCGTGGAGAGGGCG
GGTCGTACGGCGGCGCGTGGTCCGATCGGAAGCGCTCTCTGGAGAGGTTT
GAGGGCCAGGACTGGTGTCACGGCTCCCCGAAGAAGGTGATGCAACGCGG
TCCGGTTGGTTAGCTTGTGTAAACAGCTTTGGAGGGACGCCGTACCTCGC
GAATGGGATGCACGCGTACGTGCGTGCCGTGTGGGCGACGACGCTGTTTT
TTTTTACGCGTAATGCGCTGGTGCTGTGTCGTGTGCACGGGGTGCCATGA
AGCCATGTTTGGACGTGGGCTGCGCAATCATCAAACAGCCTACGATCGTT
GCGTCATGAACTCAGACTTATTAGCCTTCATCACGGATGATTTGGACGGG
GTGGAAGAACGCCGTTATTGCAACGAACGGAGCACGACAGAGTGTACATG
ACAGCAACTCCGTGACGCCACCACTCTCATCGCCGCGCCTTTCTCCCTCC
GCCCCCAATATACGCCCCTCGCGTGATCTCTCGGACCCGCCAATCAAAAC
ACAGCACGCTCCAAGCCCGCGGACAGCGGATGCTTTTCGAGCGGAGAGCC
GAGGTCGGCCTGCCCGCTGGGACGACGTGCGGCAGAACTCGGGCGGAGGC
GGCGGCGGCGGAGGTCGACCAGACACCAGAGAACCTTCCCGGGATTCCCG
CGCCCCGGGCGAGGGTGGGTCAAGGGAATGCCGCGGCAGCGACGCGCGGG
TCTGCGGTACGGAGGCGTCCGTCGGAAGGGCTCGCGGGAGCGGCGGCGGC
GGCGGCGGCGAGCAGACGGCTGCCCCTTGGGTAGGTCGAGGGGGAGAGCG
AAGTGATCGGAGGGATTCTGGGGGCAGTAGCACAAGGGCGCCCGAACACG
GCGGCGCCAGGGACGGTCCGTCGTCTAGCAGGGGCGGCTCGGAAGGGGCA
GCGTGGCAGGACGCCGCGGGCGGCAGGGGGGGGCACCACAATCACCACCG
ACAGGGCGGCGGCGGCGGCGGCGGCGGCGGCGGGGTCGGGGCGCGGGGTC
GGGGCGCCGTCCGGGGGCACTGGAAGGCTCGGCTGGCGGGGGGGCGTGGT
GGCAGCGATTTCGCGCAGCGAGGCCACCAGGTTGAAGGAGACCGTGCGCG
TGAACCTTCTATCGCCGCGCAGCAGAGCGGAGGGCGCGACAACGGGTGGC
CGGAGCGAGCCGGGGGGGGCAGCGCAAGCAGGAACGACGGCAACGGCGGG
GACCCCGCGGCCGGGTCGAGACAGGCAGGGAGGTCGGAAGAGCCGAGGGC
TGGTGGCGGCCGATCAGGGGAGAGGGGGCGCGAGGCGGGTGCTAGCGTCC
ACGCGCCGGGGAGCAGGTACGACTCGCAGGCGAGGGGATCGAGCGCGGGT
CCTGGCGGAGTAGGAGCGGACCGACGCACGAAGGGGCCGACAGATTTTCG
TTACGGGCAAGCGGCTGCCGCTAACGGGGGGGCGGGTGGTGGTGGCGGTG
GCCGCGGTGCGGGGTCTCGAAAAGAGAAGGACTATTCTGGGTTCGCCCTC
CCAAAACCGGGGGCGCCGCCGCATGCTTCTTCTTCTGCGGGACCCCCGGC
CTCGTCATCGGCAGCGACGACCACGACAAGTGCATCCGTGTCCGTGTCCA
GGCCAGACCGCTCGGCGAGGTCGCAAGAATTTGGCCAGGACAACCACCAG
CAGCAGCAGCAGCAACAACAAAATCGATCCATGGCTCGCCCGAACGGCGG
CGGAAGGGGCGGCGGGAACGGCGGCGGCTCTCAGTCTTCTTTCCGCCCTC
GCGGGATGTCCGAGAGAGTGGGGGGCAGGGGGTTTCGACAAGAAGGTGAC
GGCGGTGGTGGCGTTGCCAAAGATTTTCAGGCGTCGCGCGGCGACGGCGT
CAACGGCCGCGGCAACTACAGCAGGTCGTCGGCCCGCAGCCTTTCGCCCC
CGGCGGCTTCGCGGTCCGCGCGCCGCAGCAGCGCTTCGCCGAACGGCCGG
CAGCAAGGCTACAAGAGGCAGGGCAACAGCGGCCCCGATGCATATTCTCC
AAGCGGCGGCGGGGGCGACGACGCCTACCAACGGTCCGGGAAACCTCGTC
CTGGCTGGGAGTCTTCGGGGATGGGACGGGGAGGGGCAGGAGGGCGAAGG
CCTTGGAAAGGAAGGGGCGAATACCACCACCACAGCAACGGCGGCAAGGA
GGAAGAACGGTATGGCAATAATAGTGGACGTGCAAGCAACAACAGCAACG
GCAGATTTCAGAACTCGGACCATCGCAGCAGAGGGAACTTTCCCGGCCGG
GGGGAAGGGGGCGGGTTTGGTGGGCGAGGGAGGGGTTGGGGTGGGGGGGG
GGGGGGGGGGGGGGGGGGGGGACGGTTTGACAACAGGAGCGACAACGGAA
GCAATAGCTGA
back to top

Coding sequence (CDS) from alignment at E-siliculosus-1a_F_contig1175:1051..9111-

>mRNA_E-siliculosus-1a_F_contig1175.1130.1 ID=mRNA_E-siliculosus-1a_F_contig1175.1130.1|Name=mRNA_E-siliculosus-1a_F_contig1175.1130.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=9456bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1175:1051..9111- (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
ATGGACGACGAAGAGACGCAGTTTTTGCTCGACGACGAGGACGAAAAGCC
CAGGAAGATGGACGACGAAGAGACGCAGTTTTTGCTCGACGACGAGGACG
AAAAGCCCAGGAAGGAAAAGAATCAGAAGAAGACCCCGGCATCTCCGAAG
TCGAAGGACAAAGAGACGGCCGCTGTAGTTCAGGCGGGAACAGCAGGAAT
GAGCCGAGCGAAGGGGCCAAAGACCGGGCCAGGTAGCCGGGGGGGAAAGG
GCGGCAAGGGGGCCAAGGTCGGGGCGGGGGCGAAGGGAGATGCGGACAAG
CACGACCCAGCTAAACCGAAGAAGGCTCGGAGCGCTTACAACTTTTATCT
GCTCAAGCGGATAGCCCAGGAAAAGAATCAGAAGAAGACCCCGGCATCTC
CGAAGTCGAAGGACAAAGAGACGGCCGCTGTAGTTCAGGCGGGAACAGCA
GGAATGAGCCGAGCGAAGGGGCCAAAGACCGGGCCAGGTAGCCGGGGGGG
AAAGGGCGGCAAGGGGGCCAAGGTCGGGGCGGGGGCGAAGGGAGATGCGG
ACAAGCACGACCCAGCTAAACCGAAGAAGGCTCGGAGCGCTTACAACTTT
TATCTGCTCAAGCGGATAGCCCAGCTTAAGGAGGAGGGTGTGGTGGAGCA
GCACCGGGACCGTTTCGCCCAGGCGGCCGGCGAATGGCGGGACATGACCT
TCGGCGAGCGGATCCCGTACGAGGATATGGCAAAGGCGGACAAGGAGCGG
CACCAGAGGGACCTAGACATCGCCACCAGGAACCTTAACGCGGCACTTCA
TGGCACCGTTCCGAAGCACGCTTAAGGAGGAGGGTGTGGTGGAGCAGCAC
CGGGACCGTTTCGCCCAGGCGGCCGGCGAATGGCGGGACATGACCTTCGG
CGAGCGGATCCCGTACGAGGATATGGCAAAGGCGGACAAGGAGCGGCACC
AGAGGGACCTAGACATCGCCACCAGGAACCTTAACGCGGCACTTCATGGC
ACCGTTCCGAAGCACGGGCAGGGAATGTGCTCCGCCATCGGCTTCCCAGG
GCTTAAGGCGCTGGCCGCGAACTCCCCTCACGAAGACGTGTGCGCGGTGT
GCAAGGAGGAAGGGGACCTCCTTTGCTGCGACTTTTGCCCCTCCACGTAC
CACCTGACCTGTCTGGACCCTCCCATGCTATCCCTGCCCTCGGGCAGGGA
ATGTGCTCCGCCATCGGCTTCCCAGGGCTTAAGGCGCTGGCCGCGAACTC
CCCTCACGAAGACGTGTGCGCGGTGTGCAAGGAGGAAGGGGACCTCCTTT
GCTGCGACTTTTGCCCCTCCACGTACCACCTGACCTGTCTGGACCCTCCC
ATGCTATCCCTGCCCTCGGACGATGTCCAGTGGGCGTGCCCCGCTTGCTC
CGCGAGCGTCGAGGTCGCCGAGATGTCTGCGCCGCAGCTGAAGCCGAAAA
GGGAGCGCAAGGACGGGCGGAAGCGGCAGCGGACGAGCACCGCCGCGGTG
GCGGGGTCGTCATCGCCCAGAGCCGGCGCTGATGCCGGCGGCAGCTTCAC
CATCCCGAAGCTCAAGAAGCCAGGGAAGAAACGGAACAAGGCGGCGGCTG
CGGCGGCCGGCGAAGAGAGTGAAGCGAAGTTGTCGCCGAGGATAGTAAAG
CGGGAGGAGGAGAAGGACGAGCTGACGACGGCAGCGGCGGTCCTTGCATC
GAGCGCCAACTCGGCGAACAGGAACCGGTTGGTGAAGGCTCCCCAGAAGG
CGGAAATCTCGCCGCGGGTGGGGCTCGGGCTGACGGCTTCTACGGACGAG
ATGTCGGCGGCGACGCTACGCTACCCGGACTTGAGCGGGAGCCGGAACAA
TGACAAGAGCCCGACGAAGGCGATGATGTCTCTTGCCGTGGCTGCGGCGT
CTGTGGCCGCGAACGAGGCGGCGATCGCGGCGGCGGTGGCAGCGGCGGCG
GCGGCTGCGCCGGCGGCCGCCCCGCCCCCGCCGCCCAAGGCCCTCGGCCT
CAAGAAGTTGCTCCACCAGCGTGTCCAGCACGACGAGGCTAACTCCAATC
CCGCCTTCTCGCCCAAGAAGCTGCTCAAGCACCGCCTGCTGGCAGCGCAG
CAAGGTACTACTACTACGTCTTCCTCCGACCCGGCGCCTTCCCCTTCCCC
CCCGGCGTCCAGTCCTAGCACGGGAGGAGGAGGAAATAGCTACAGCCGTG
GTTTGGATGACGCTGGTTCTGCTGACAGGTACCCGGGGCGAGCCGGCGAG
CGAGGGGCAAGCGGCGGTGGGCGGCAAGACCACGGAGACGTGGAGCGGCA
GCGGTCGGGCTTTGGCGGTGCGTATGCGGGGGAATCGGGCCGGAGTGCTG
GGCCTTACGGCGGACGCGAGGCAAGAGGCAGTGACGAAAGGGACAGGATC
GCCGCCAAGGGCGAATTGAACGGCAGGGTGCTGGCGGACGGCGGGGTGCA
CGGCAGGCGGAATGGCACGGGCGGGATGAACGACAACGTGGGTGGTCGGA
GCGACAACAACCGTGGGCGACACACGGATGGTGGCACCGCCGAGGGCAGT
GGTGTTGGCGGCGGCGACCGCGCTGCTTTGGACGGCGAGCGGCGTCGCAG
AGCGGAACTTGGCGTCGGCGGTGGGTATGACGCGGGAAGGAATGGGGGTG
CCAATGCTAACGGGGTACATGGGAGGGAAGCTTCCCGCAGCGGTTGGGGG
GCGGGGTCGTCCGGAGAGAGAAATGGGAGGTTCGCCAAGGGCATGAACAA
CGCCGCCGACAAGTGGACGGGCGGGGGGGAGTCAGGAAGGATGGACGCAC
CGCGGCCTCACGGTTTCAGCCCCGCTGGTTTCGACGAAGAGGGCGGCCGT
AGACAAGGCAGACAGCCGCAATACCGCGGCGATTCTTACGCGAGTGGCCG
GGGAGATGTCACACAGCAGCGCCGCGATGACGGAGGAGGGGAGCGGCGTG
ACAGTAGCAGTTCCGGTGGGAGAGGCTACAACAACAAGGCTTCGGCCTTG
GCGCCGCCGCCGCCGCCACCCCACTGCTGGGACGGCGGCGGCGGCGGCGG
CGGCGGCCGGAGCAGTTGGCGACCCGACCGTCCGTCCGAGGGCAAACGAG
AACCGGACGGGAGAGCACAGCCGAGGGAATCAGCAGGCAGGGGGGGCTTT
GCAGACGAGAGCCGTGAGCGTCAACGGAGGCCCCGTAGCCGAGAAGGAGA
GTACGCTAACGGCGGGCCGCCGCCGCCTGGCTCGTGCTCCAGGTCTGCCG
ACGACGAGCGGGACGGGAGAGGCCGGCCGCCGTGGGGGGGCGACGCGCTT
AGGGGTGGCAGCCGCTCCCGTGCGGCCGATGGCGGCGGCGACAGGGAGAA
AGGGTTTTCCGCTGCCGGGAGGGCGGGCGGTCAACACTACGGCAGCAGCA
ACGGGAGGGTTGGAGATTCCGCCGCCGCCGCCGCCGCCGCCGGTGGTGGT
TGTGGCCGTGGAGAGGGCGGGTCGTACGGCGGCGCGTGGTCCGATCGGAA
GCGCTCTCTGGAGAGGTTTGAGGGCCAGGACTGGTGTCACGGCTCCCCGA
AGAAGGACGATGTCCAGTGGGCGTGCCCCGCTTGCTCCGCGAGCGTCGAG
GTCGCCGAGATGTCTGCGCCGCAGCTGAAGCCGAAAAGGGAGCGCAAGGA
CGGGCGGAAGCGGCAGCGGACGAGCACCGCCGCGGTGGCGGGGTCGTCAT
CGCCCAGAGCCGGCGCTGATGCCGGCGGCAGCTTCACCATCCCGAAGCTC
AAGAAGCCAGGGAAGAAACGGAACAAGGCGGCGGCTGCGGCGGCCGGCGA
AGAGAGTGAAGCGAAGTTGTCGCCGAGGATAGTAAAGCGGGAGGAGGAGA
AGGACGAGCTGACGACGGCAGCGGCGGTCCTTGCATCGAGCGCCAACTCG
GCGAACAGGAACCGGTTGGTGAAGGCTCCCCAGAAGGCGGAAATCTCGCC
GCGGGTGGGGCTCGGGCTGACGGCTTCTACGGACGAGATGTCGGCGGCGA
CGCTACGCTACCCGGACTTGAGCGGGAGCCGGAACAATGACAAGAGCCCG
ACGAAGGCGATGATGTCTCTTGCCGTGGCTGCGGCGTCTGTGGCCGCGAA
CGAGGCGGCGATCGCGGCGGCGGTGGCAGCGGCGGCGGCGGCTGCGCCGG
CGGCCGCCCCGCCCCCGCCGCCCAAGGCCCTCGGCCTCAAGAAGTTGCTC
CACCAGCGTGTCCAGCACGACGAGGCTAACTCCAATCCCGCCTTCTCGCC
CAAGAAGCTGCTCAAGCACCGCCTGCTGGCAGCGCAGCAAGGTACTACTA
CTACGTCTTCCTCCGACCCGGCGCCTTCCCCTTCCCCCCCGGCGTCCAGT
CCTAGCACGGGAGGAGGAGGAAATAGCTACAGCCGTGGTTTGGATGACGC
TGGTTCTGCTGACAGGTACCCGGGGCGAGCCGGCGAGCGAGGGGCAAGCG
GCGGTGGGCGGCAAGACCACGGAGACGTGGAGCGGCAGCGGTCGGGCTTT
GGCGGTGCGTATGCGGGGGAATCGGGCCGGAGTGCTGGGCCTTACGGCGG
ACGCGAGGCAAGAGGCAGTGACGAAAGGGACAGGATCGCCGCCAAGGGCG
AATTGAACGGCAGGGTGCTGGCGGACGGCGGGGTGCACGGCAGGCGGAAT
GGCACGGGCGGGATGAACGACAACGTGGGTGGTCGGAGCGACAACAACCG
TGGGCGACACACGGATGGTGGCACCGCCGAGGGCAGTGGTGTTGGCGGCG
GCGACCGCGCTGCTTTGGACGGCGAGCGGCGTCGCAGAGCGGAACTTGGC
GTCGGCGGTGGGTATGACGCGGGAAGGAATGGGGGTGCCAATGCTAACGG
GGTACATGGGAGGGAAGCTTCCCGCAGCGGTTGGGGGGCGGGGTCGTCCG
GAGAGAGAAATGGGAGGTTCGCCAAGGGCATGAACAACGCCGCCGACAAG
TGGACGGGCGGGGGGGAGTCAGGAAGGATGGACGCACCGCGGCCTCACGG
TTTCAGCCCCGCTGGTTTCGACGAAGAGGGCGGCCGTAGACAAGGCAGAC
AGCCGCAATACCGCGGCGATTCTTACGCGAGTGGCCGGGGAGATGTCACA
CAGCAGCGCCGCGATGACGGAGGAGGGGAGCGGCGTGACAGTAGCAGTTC
CGGTGGGAGAGGCTACAACAACAAGGCTTCGGCCTTGGCGCCGCCGCCGC
CGCCACCCCACTGCTGGGACGGCGGCGGCGGCGGCGGCGGCGGCCGGAGC
AGTTGGCGACCCGACCGTCCGTCCGAGGGCAAACGAGAACCGGACGGGAG
AGCACAGCCGAGGGAATCAGCAGGCAGGGGGGGCTTTGCAGACGAGAGCC
GTGAGCGTCAACGGAGGCCCCGTAGCCGAGAAGGAGAGTACGCTAACGGC
GGGCCGCCGCCGCCTGGCTCGTGCTCCAGGTCTGCCGACGACGAGCGGGA
CGGGAGAGGCCGGCCGCCGTGGGGGGGCGACGCGCTTAGGGGTGGCAGCC
GCTCCCGTGCGGCCGATGGCGGCGGCGACAGGGAGAAAGGGTTTTCCGCT
GCCGGGAGGGCGGGCGGTCAACACTACGGCAGCAGCAACGGGAGGGTTGG
AGATTCCGCCGCCGCCGCCGCCGCCGCCGGTGGTGGTTGTGGCCGTGGAG
AGGGCGGGTCGTACGGCGGCGCGTGGTCCGATCGGAAGCGCTCTCTGGAG
AGGTTTGAGGGCCAGGACTGGTGTCACGGCTCCCCGAAGAAGCACGCTCC
AAGCCCGCGGACAGCGGATGCTTTTCGAGCGGAGAGCCGAGGTCGGCCTG
CCCGCTGGGACGACGTGCGGCAGAACTCGGGCGGAGGCGGCGGCGGCGGA
GGTCGACCAGACACCAGAGAACCTTCCCGGGATTCCCGCGCCCCGGGCGA
GGGTGGGTCAAGGGAATGCCGCGGCAGCGACGCGCGGGTCTGCGGTACGG
AGGCGTCCGTCGGAAGGGCTCGCGGGAGCGGCGGCGGCGGCGGCGGCGAG
CAGACGGCTGCCCCTTGGGTAGGTCGAGGGGGAGAGCGAAGTGATCGGAG
GGATTCTGGGGGCAGTAGCACAAGGGCGCCCGAACACGGCGGCGCCAGGG
ACGGTCCGTCGTCTAGCAGGGGCGGCTCGGAAGGGGCAGCGTGGCAGGAC
GCCGCGGGCGGCAGGGGGGGGCACCACAATCACCACCGACAGGGCGGCGG
CGGCGGCGGCGGCGGCGGCGGGGTCGGGGCGCGGGGTCGGGGCGCCGTCC
GGGGGCACTGGAAGGCTCGGCTGGCGGGGGGGCGTGGTGGCAGCGATTTC
GCGCAGCGAGGCCACCAGGTTGAAGGAGACCGTGCGCGTGAACCTTCTAT
CGCCGCGCAGCAGAGCGGAGGGCGCGACAACGGGTGGCCGGAGCGAGCCG
GGGGGGGCAGCGCAAGCAGGAACGACGGCAACGGCGGGGACCCCGCGGCC
GGGTCGAGACAGGCAGGGAGGTCGGAAGAGCCGAGGGCTGGTGGCGGCCG
ATCAGGGGAGAGGGGGCGCGAGGCGGGTGCTAGCGTCCACGCGCCGGGGA
GCAGGTACGACTCGCAGGCGAGGGGATCGAGCGCGGGTCCTGGCGGAGTA
GGAGCGGACCGACGCACGAAGGGGCCGACAGATTTTCGTTACGGGCAAGC
GGCTGCCGCTAACGGGGGGGCGGGTGGTGGTGGCGGTGGCCGCGGTGCGG
GGTCTCGAAAAGAGAAGGACTATTCTGGGTTCGCCCTCCCAAAACCGGGG
GCGCCGCCGCATGCTTCTTCTTCTGCGGGACCCCCGGCCTCGTCATCGGC
AGCGACGACCACGACAAGTGCATCCGTGTCCGTGTCCAGGCCAGACCGCT
CGGCGAGGTCGCAAGAATTTGGCCAGGACAACCACCAGCAGCAGCAGCAG
CAACAACAAAATCGATCCATGGCTCGCCCGAACGGCGGCGGAAGGGGCGG
CGGGAACGGCGGCGGCTCTCAGTCTTCTTTCCGCCCTCGCGGGATGTCCG
AGAGAGTGGGGGGCAGGGGGTTTCGACAAGAAGGTGACGGCGGTGGTGGC
GTTGCCAAAGATTTTCAGGCGTCGCGCGGCGACGGCGTCAACGGCCGCGG
CAACTACAGCAGGTCGTCGGCCCGCAGCCTTTCGCCCCCGGCGGCTTCGC
GGTCCGCGCGCCGCAGCAGCGCTTCGCCGAACGGCCGGCAGCAAGGCTAC
AAGAGGCAGGGCAACAGCGGCCCCGATGCATATTCTCCAAGCGGCGGCGG
GGGCGACGACGCCTACCAACGGTCCGGGAAACCTCGTCCTGGCTGGGAGT
CTTCGGGGATGGGACGGGGAGGGGCAGGAGGGCGAAGGCCTTGGAAAGGA
AGGGGCGAATACCACCACCACAGCAACGGCGGCAAGGAGGAAGAACGGTA
TGGCAATAATAGTGGACGTGCAAGCAACAACAGCAACGGCAGATTTCAGA
ACTCGGACCATCGCAGCAGAGGGAACTTTCCCGGCCGGGGGGAAGGGGGC
GGGTTTGGTGGGCGAGGGAGGGGTTGGGGTGGGGGGGGGGGGGGGGGGGG
GGGGGGGGGACGGTTTGACAACAGGAGCGACAACGGAAGCAATAGCTGAC
ACGCTCCAAGCCCGCGGACAGCGGATGCTTTTCGAGCGGAGAGCCGAGGT
CGGCCTGCCCGCTGGGACGACGTGCGGCAGAACTCGGGCGGAGGCGGCGG
CGGCGGAGGTCGACCAGACACCAGAGAACCTTCCCGGGATTCCCGCGCCC
CGGGCGAGGGTGGGTCAAGGGAATGCCGCGGCAGCGACGCGCGGGTCTGC
GGTACGGAGGCGTCCGTCGGAAGGGCTCGCGGGAGCGGCGGCGGCGGCGG
CGGCGAGCAGACGGCTGCCCCTTGGGTAGGTCGAGGGGGAGAGCGAAGTG
ATCGGAGGGATTCTGGGGGCAGTAGCACAAGGGCGCCCGAACACGGCGGC
GCCAGGGACGGTCCGTCGTCTAGCAGGGGCGGCTCGGAAGGGGCAGCGTG
GCAGGACGCCGCGGGCGGCAGGGGGGGGCACCACAATCACCACCGACAGG
GCGGCGGCGGCGGCGGCGGCGGCGGCGGGGTCGGGGCGCGGGGTCGGGGC
GCCGTCCGGGGGCACTGGAAGGCTCGGCTGGCGGGGGGGCGTGGTGGCAG
CGATTTCGCGCAGCGAGGCCACCAGGTTGAAGGAGACCGTGCGCGTGAAC
CTTCTATCGCCGCGCAGCAGAGCGGAGGGCGCGACAACGGGTGGCCGGAG
CGAGCCGGGGGGGGCAGCGCAAGCAGGAACGACGGCAACGGCGGGGACCC
CGCGGCCGGGTCGAGACAGGCAGGGAGGTCGGAAGAGCCGAGGGCTGGTG
GCGGCCGATCAGGGGAGAGGGGGCGCGAGGCGGGTGCTAGCGTCCACGCG
CCGGGGAGCAGGTACGACTCGCAGGCGAGGGGATCGAGCGCGGGTCCTGG
CGGAGTAGGAGCGGACCGACGCACGAAGGGGCCGACAGATTTTCGTTACG
GGCAAGCGGCTGCCGCTAACGGGGGGGCGGGTGGTGGTGGCGGTGGCCGC
GGTGCGGGGTCTCGAAAAGAGAAGGACTATTCTGGGTTCGCCCTCCCAAA
ACCGGGGGCGCCGCCGCATGCTTCTTCTTCTGCGGGACCCCCGGCCTCGT
CATCGGCAGCGACGACCACGACAAGTGCATCCGTGTCCGTGTCCAGGCCA
GACCGCTCGGCGAGGTCGCAAGAATTTGGCCAGGACAACCACCAGCAGCA
GCAGCAGCAACAACAAAATCGATCCATGGCTCGCCCGAACGGCGGCGGAA
GGGGCGGCGGGAACGGCGGCGGCTCTCAGTCTTCTTTCCGCCCTCGCGGG
ATGTCCGAGAGAGTGGGGGGCAGGGGGTTTCGACAAGAAGGTGACGGCGG
TGGTGGCGTTGCCAAAGATTTTCAGGCGTCGCGCGGCGACGGCGTCAACG
GCCGCGGCAACTACAGCAGGTCGTCGGCCCGCAGCCTTTCGCCCCCGGCG
GCTTCGCGGTCCGCGCGCCGCAGCAGCGCTTCGCCGAACGGCCGGCAGCA
AGGCTACAAGAGGCAGGGCAACAGCGGCCCCGATGCATATTCTCCAAGCG
GCGGCGGGGGCGACGACGCCTACCAACGGTCCGGGAAACCTCGTCCTGGC
TGGGAGTCTTCGGGGATGGGACGGGGAGGGGCAGGAGGGCGAAGGCCTTG
GAAAGGAAGGGGCGAATACCACCACCACAGCAACGGCGGCAAGGAGGAAG
AACGGTATGGCAATAATAGTGGACGTGCAAGCAACAACAGCAACGGCAGA
TTTCAGAACTCGGACCATCGCAGCAGAGGGAACTTTCCCGGCCGGGGGGA
AGGGGGCGGGTTTGGTGGGCGAGGGAGGGGTTGGGGTGGGGGGGGGGGGG
GGGGGGGGGGGGGGGGACGGTTTGACAACAGGAGCGACAACGGAAGCAAT
AGCTGA
back to top