mRNA_E-siliculosus-1a_F_contig1174.1127.1 (mRNA) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E-siliculosus-1a_F_contig1174.1127.1
Unique NamemRNA_E-siliculosus-1a_F_contig1174.1127.1
TypemRNA
OrganismEctocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig1174.1127.1 vs. uniprot
Match: D8LBY3_ECTSI (Hypothetical leucine rich repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LBY3_ECTSI)

HSP 1 Score: 749 bits (1934), Expect = 3.510e-264
Identity = 392/438 (89.50%), Postives = 411/438 (93.84%), Query Frame = 1
Query:    1 MSLFCLSGIGWFRRFLVATQLSLLAEALITLTKADYSPVLALVRVIEPLFKSVPQLLLQLHAILWLWTETSFTSSRLAWRVVSVCISAASLAYAATDVSSVERLLTCDGGKDGERFRLCPCFPSLTGLVFGRVPAGGASSLRGLGNVHPRSHVWLCLVYHVLEIVARFVPLAMLVLVVRGWFFFVLVYLWVSRALIVWMTARQALGFRFWVRLVAMPFLDSIVDETTAFGIGLGLTLVEFIVCMVIYHVYKHDDLPSRARLVLVTVASCCMVGKMCLAWVAICPLKVDGDYPESQGDGVLGDGRGSAMTDGCVADVEMSAIEDGKVEGGAEARAVSEAASPKGADGPSVTSAVSTGSVVRGPGDVKVEDETDGVETDGFVEGSDLTRMEDGKIDDGSKDGGGSEVSPPEETHLPPSTHALSTISTVGGPDDAKVEDDL 1314
            MSLFCLSGIGWFRRFLVA QLSLLAEALITLTKADYSPVLALVRVIEPLF+SVPQLLLQLHA+LWLWTETSFTSSRLAWRVVSVCISAASLAYAATDVSSVERL TCDGGKDGERFRLCPCFPSLTGLVF RVPA G SSLRGLGNVHPRSHVWLCLVYHVLEIVARFVPLAML+LVVRGWFFFVLVYLWVSRAL+VWM AR+ LGFRFWVRLVAMPFLDSI+DETTAFGIGLGLTLVEFIVCMV+YHVYKHDDLPSRARLVLVTVASCCMVGKMCLA VAI PLKVDG+Y ESQGDGVLGDGRGSA+TDG VADVEMSAIED KV+GG EA  VSE ASPKGADGPSVTSA+STGSV+RGPGDVK+EDETDG + D   +GS+L RMEDGKI+DGSK  GGSEVSPPE THLPP+TH LST+STVGG DDAKVEDDL
Sbjct:  457 MSLFCLSGIGWFRRFLVAAQLSLLAEALITLTKADYSPVLALVRVIEPLFESVPQLLLQLHAMLWLWTETSFTSSRLAWRVVSVCISAASLAYAATDVSSVERLSTCDGGKDGERFRLCPCFPSLTGLVFSRVPAQGTSSLRGLGNVHPRSHVWLCLVYHVLEIVARFVPLAMLLLVVRGWFFFVLVYLWVSRALMVWMAAREVLGFRFWVRLVAMPFLDSIMDETTAFGIGLGLTLVEFIVCMVVYHVYKHDDLPSRARLVLVTVASCCMVGKMCLALVAISPLKVDGNYSESQGDGVLGDGRGSAVTDGSVADVEMSAIEDSKVDGGVEASVVSEPASPKGADGPSVTSALSTGSVIRGPGDVKLEDETDGADADELEQGSELMRMEDGKIEDGSKAAGGSEVSPPEGTHLPPATHPLSTMSTVGGSDDAKVEDDL 894          
BLAST of mRNA_E-siliculosus-1a_F_contig1174.1127.1 vs. uniprot
Match: A0A6H5JJ93_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJ93_9PHAE)

HSP 1 Score: 664 bits (1713), Expect = 2.470e-236
Identity = 351/405 (86.67%), Postives = 367/405 (90.62%), Query Frame = 1
Query:    1 MSLFCLSGIGWFRRFLVATQLSLLAEALITLTKADYSPVLALVRVIEPLFKSVPQLLLQLHAILWLWTETSFTSSRLAWRVVSVCISAASLAYAATDVSSVERLLTCDGGKDGERFRLCPCFPSLTGLVFGRVPAGGASSLRGLGNVHPRSHVWLCLVYHVLEIVARFVPLAMLVLVVRGWFFFVLVYLWVSRALIVWMTARQALGFRFWVRLVAMPFLDSIVDETTAFGIGLGLTLVEFIVCMVIYHVYKHDDLPSRARLVLVTVASCCMVGKMCLAWVAICPLKVDGDYPESQGDGVLGDGRGSAMTDGCVADVEMSAIEDGKVEGGAEARAVSEAASPKGADGPSVTSAVSTGSVVRGPGDVKVEDETDGVETDGFVEGSDLTRMEDGKIDDGSKDGGGSEV 1215
            MS FCLSG+GWFRRFLVATQLSLLAEALITL KADYSPVLALVRVI PLF+SVPQLLLQLHA+LWLWTETSF SSRLAWRVVSVCISAASLAYAATDVSSVERL TCDGG DGERFRLCPCFPSLTG+VF RVPA G SSLRG+G+VHPRSHVWLCLVYHVLEI ARFVPLAMLV VVRGWFFFVLVYLWV R LIVWMTAR+ LGFRFWVRLVAMPFLDSI+DETTAFGIGL LTLVEFIVCMVIYHVY +DDLPSRARLVLVTVASCCMVGKMCLAWVAI PLKVDG Y ESQGD VLGDGRGSA+TDG VADVEMSA+ED KV  GAEA   SEAASP G DGPS TSAVSTGS +R PGDV+VEDETDGVE D F +GSDLTRMEDG ++DGSK  GGSEV
Sbjct:  110 MSAFCLSGVGWFRRFLVATQLSLLAEALITLQKADYSPVLALVRVIGPLFESVPQLLLQLHAMLWLWTETSFASSRLAWRVVSVCISAASLAYAATDVSSVERLSTCDGGMDGERFRLCPCFPSLTGVVFSRVPAEGTSSLRGVGDVHPRSHVWLCLVYHVLEIFARFVPLAMLVQVVRGWFFFVLVYLWVGRGLIVWMTAREVLGFRFWVRLVAMPFLDSIMDETTAFGIGLVLTLVEFIVCMVIYHVYMNDDLPSRARLVLVTVASCCMVGKMCLAWVAISPLKVDGHYSESQGDSVLGDGRGSAVTDGSVADVEMSAVEDSKVGDGAEASVTSEAASPHGEDGPSATSAVSTGSEIRSPGDVQVEDETDGVEADEFEQGSDLTRMEDGVVEDGSKAAGGSEV 514          
BLAST of mRNA_E-siliculosus-1a_F_contig1174.1127.1 vs. uniprot
Match: A0A6H5JL60_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JL60_9PHAE)

HSP 1 Score: 565 bits (1456), Expect = 1.190e-198
Identity = 317/405 (78.27%), Postives = 340/405 (83.95%), Query Frame = 1
Query:    1 MSLFCLSGIGWFRRFLVATQLSLLAEALITLTKADYSPVLALVRVIEPLFKSVPQLLLQLHAILWLWTETSFTSSRLAWRVVSVCISAASLAYAATDVSSVERLLTCDGGKDGERFRLCPCFPSLTGLVFGRVPAGGASSLRGLGNVHPRSHVWLCLVYHVLEIVARFVPLAMLVLVVRGWFFFVLVYLWVSRALIVWMTARQALGFRFWVRLVAMPFLDSIVDETTAFGIGLGLTLVEFIVCMVIYHVYKHDDLPSRARLVLVTVASCCMVGKMCLAWVAICPLKVDGDYPESQGDGVLGDGRGSAMTDGCVADVEMSAIEDGKVEGGAEARAVSEAASPKGADGPSVTSAVSTGSVVRGPGDVKVEDETDGVETDGFVEGSDLTRMEDGKIDDGSKDGGGSEV 1215
            ++LF LSG+G FRRFLVATQLSLLAEA  T+    YSPVLALVRV+EPLF+SVPQLLLQL+A+L LW ETS +SSRLAWR VSVCIS ASLAYAATDVSSVERLLTC GG D ERFRL PC  SLTGLVF RVPA G SSL+G+GNVHPRSHVWLC VYHVLEIVARFVPLAMLVLVVRGWF  VLVYLWVSR L+V +T R+ L FRF VRLVAMPFLDSI+DETTAFG GL LTLVEFI+C+VIYHVYKHDDLPS ARLVLVTVASCCMVGKMCLAWV I PLKVDG+Y  SQGDGVLGDGRGSA+TDG VADV        KVEGG EA   SEAASPKGADGPS TS V+ GSV R PGDVK+EDETDGVE   FV  SDLTR EDG I+DG+K  GGSEV
Sbjct:   23 VALFVLSGVGPFRRFLVATQLSLLAEAWNTVGGQVYSPVLALVRVVEPLFESVPQLLLQLYAMLRLWPETSSSSSRLAWREVSVCISVASLAYAATDVSSVERLLTCGGGSDCERFRLGPCCSSLTGLVFSRVPAQGTSSLKGVGNVHPRSHVWLCFVYHVLEIVARFVPLAMLVLVVRGWFLLVLVYLWVSRVLMVRVT-REGLDFRFGVRLVAMPFLDSIMDETTAFGTGLVLTLVEFILCVVIYHVYKHDDLPSGARLVLVTVASCCMVGKMCLAWVTISPLKVDGNYSGSQGDGVLGDGRGSAVTDGSVADVXXXXXXXXKVEGGVEASVTSEAASPKGADGPSATSVVA-GSVARSPGDVKLEDETDGVEAGEFVHESDLTRTEDGNIEDGAKAAGGSEV 425          
BLAST of mRNA_E-siliculosus-1a_F_contig1174.1127.1 vs. uniprot
Match: D8LFI4_ECTSI (Leucine Rich Repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LFI4_ECTSI)

HSP 1 Score: 327 bits (837), Expect = 4.350e-99
Identity = 185/290 (63.79%), Postives = 218/290 (75.17%), Query Frame = 1
Query:   37 RRFLVATQLSLLAEALITLTKADYSPVLALVRVIEPLFKSVPQLLLQLHAILWLWTETSFTSSRLAWRVVSVCISAASLAYAATDVSSVERLL-TCDGGKDG-ERFRLCPCFPSLTGLVFGRVPAGGASSLRG-LGNVHPRSHVWLCLVYHVLEIVARFVPLAMLVLVVRGWFFFVLVYLWVSRALIVWMTA---RQALGFRFWVRLVAMPFLDSIVDETTAFGIGLGLTLVEFIVCMVIYHVYKHDDLPSRARLVLVTVASCCMVGKMCLAWVAICPLKVDGDYPESQG 888
            RRFLVATQLSLL EA+ +     YSPVLALVRVIEPLF+SVPQLLLQL+A+L LW+ETS ++S L  RV+SVCIS  SLAYAATDVSSVERLL T   G+ G ERFR+CP  PS+T LVF RVP  G S L G +G VHPR+HVW C +YHVLEIV+RFVPL M+ LV+R WFF VL YLW+SR L+VW  A      +GFRF VR+VAMPF+DSI+D T AFG GL LTLVEF+ C+V YH++  D LP  AR  L  ++ CCMVGKM LA +AI PLK +    +SQG
Sbjct:  253 RRFLVATQLSLLLEAVFSAASRTYSPVLALVRVIEPLFESVPQLLLQLYAMLLLWSETSLSNSDLNGRVISVCISTVSLAYAATDVSSVERLLNTRLSGEGGTERFRMCPDCPSVTALVFSRVPEKGVSRLAGRMGWVHPRTHVWFCFLYHVLEIVSRFVPLTMIALVLRKWFFLVLPYLWISRCLVVWAAAYSGEATMGFRFRVRIVAMPFIDSILDGTRAFGAGLVLTLVEFVACIVTYHLFSSDHLPPHARWTLTIISICCMVGKMRLALLAIIPLKANERGLQSQG 542          
BLAST of mRNA_E-siliculosus-1a_F_contig1174.1127.1 vs. uniprot
Match: A0A6H5K7Q2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K7Q2_9PHAE)

HSP 1 Score: 321 bits (822), Expect = 1.180e-97
Identity = 183/290 (63.10%), Postives = 216/290 (74.48%), Query Frame = 1
Query:   37 RRFLVATQLSLLAEALITLTKADYSPVLALVRVIEPLFKSVPQLLLQLHAILWLWTETSFTSSRLAWRVVSVCISAASLAYAATDVSSVERLL-TCDGGKDG-ERFRLCPCFPSLTGLVFGRVPAGGASSLRG-LGNVHPRSHVWLCLVYHVLEIVARFVPLAMLVLVVRGWFFFVLVYLWVSRALIVWMTA---RQALGFRFWVRLVAMPFLDSIVDETTAFGIGLGLTLVEFIVCMVIYHVYKHDDLPSRARLVLVTVASCCMVGKMCLAWVAICPLKVDGDYPESQG 888
            RRFLVATQLSLL EA+ +     YSPVLALVRVIEPLF+SVPQLLLQL+A+L LW+ETS ++S L  RV+SVCIS  SLAYAATDVSSVERLL T   G+ G ER R+CP  P +TGLVF RVP  G S L G +G VHPR+HVW C +YHVLEIV+RFVPL M+ LV+R WFF VL YLW+SR L+VW  A      +GFRF VR+VAMPF+DSI+D T AFG GL LTLV+F+ C+V YH++    LP  AR  L  +A CCMVGKM LA +AI PLK +    +SQG
Sbjct:  158 RRFLVATQLSLLLEAVFSAASRTYSPVLALVRVIEPLFESVPQLLLQLYAMLLLWSETSLSNSDLNGRVISVCISTVSLAYAATDVSSVERLLNTRLSGEGGTERSRMCPDCPFITGLVFSRVPEKGVSRLAGRMGWVHPRTHVWFCFLYHVLEIVSRFVPLTMIALVLRKWFFLVLPYLWISRCLVVWAAAYWGEATMGFRFRVRIVAMPFIDSILDGTRAFGAGLVLTLVKFVACIVTYHLFSSGHLPPHARWTLTIIAICCMVGKMRLALLAILPLKANEHGFQSQG 447          
BLAST of mRNA_E-siliculosus-1a_F_contig1174.1127.1 vs. uniprot
Match: A0A6H5KD04_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KD04_9PHAE)

HSP 1 Score: 290 bits (743), Expect = 2.560e-89
Identity = 203/444 (45.72%), Postives = 255/444 (57.43%), Query Frame = 1
Query:   25 IGWFRRFLVATQLSLLAEALITLTKADYSPVLALVRVIEPLFKSVPQLLLQLHAILWLWTETSFTSSRLAWRVVSVCISAASLAYAATDVSSVERLLTCDGGKDGERFRLCPCFPSLTGLVFGRVPAGGASSLRGLGNVHPRSHVWLCLVYHVLEIVARFVPLAMLVLVVRGWFFFVLVYLWVSRALI-----VWMTA----------RQALGFRFWVRLVAMPFLDSIVDETTAFGIGLGLTLVEFIVCMVIYHVYKHDDLPSRARLVLVTVASCCMVGKMCLAWVAICPLKVDGDYPESQGDGVLGDGRGSAM----------TDGCVADVEMSAIEDGKVEGGAEARAVSEAASPKGADGPSVTSAVSTGSVVRGPGDVKVEDETDGVETDGFVEGSDLTRMEDGKIDDGSKDGGGSEVSPPEETHLPPSTHALSTISTVG 1281
            + W RR LVATQLSLL EA   + K  ++P+L +VR+IE LF+SVPQLLLQL+A L LW+       R   R+ SVCISA SLAY ATD+ S +RL  C    +G    +CPC   LTGL F RVP  G+S L G G+VHPR+HVWLCL+YH+LEIV+RFVPLAML LV+R WFF VL YLW SR  +      W             R+++  R  V+LVAMPFLDS++D + AFG+GL +TLVEFIVC+VIYH+Y HDDLP+  RL L  VAS CMVGK+ LA +AI PL+ D D P   G  V     GSA+           +G VA   +  I++GKV+         E   P G      ++A  + +V  G               DG VE + +                 SE +P E   LPP+THALST S  G
Sbjct:  124 VPWVRRVLVATQLSLLVEAWRNVAKRRFTPILEVVRLIEALFESVPQLLLQLYAALLLWSSPE----RNVLRLGSVCISAGSLAYNATDLFSAKRLERCSDPLEGG---ICPCCSWLTGLPFSRVPEKGSSRLNGWGDVHPRTHVWLCLLYHILEIVSRFVPLAMLALVMRKWFFLVLPYLWWSRYAVRKKAAAWTRKSTRETDKARPRKSVTERVRVKLVAMPFLDSVMDGSAAFGLGLVVTLVEFIVCVVIYHLYNHDDLPTNLRLGLYVVASSCMVGKLLLAALAIFPLRADEDGPGIFGSAVASS-SGSALGGPSETVGDVDEGVVALANVMEIDEGKVD---------ELERPSGTPLAGASAAAVSEAVEGG--------------LDGDVENALI-----------------SERAPSEGMRLPPTTHALSTPSPNG 519          
BLAST of mRNA_E-siliculosus-1a_F_contig1174.1127.1 vs. uniprot
Match: A0A6H5JCI0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCI0_9PHAE)

HSP 1 Score: 194 bits (493), Expect = 4.830e-54
Identity = 130/297 (43.77%), Postives = 172/297 (57.91%), Query Frame = 1
Query:    4 SLFCLSGIGWFRRFLVATQLSLLAEALITLTKADYSPVLALVRVIEPLFKSVPQLLLQLHAILWLWTETSFTSSRLAWRVVSVCISAASLAYAATDVSSVERLLTCDGGKDGERFRLCP-------CFP-----SLTGLVFGRVPAGGASSLRGLGNVHPRSHVWLCLVYHVLEIVARFVPLAMLVLVVRGWFFFVLVYLWVSRALIV----WMT---------ARQALG-FRFWVRLVAMPFLDSIVDETTAFGIGLGLTLVEFIVCMVIYHVYKHDDLPSRARLVLVTVASCCMV 816
            +LF LSG+G+ RR LV  QLS+L EA  T T   YS  L  VRV+EPLF++   LLLQLHAIL  W E   + +       SV IS  S +YA TD SSVE L        G+    C        C+P     S T L F R P  G  +L  LG +HP++ VW+C +YH++E+V+RF+PLA L+L+ R WF  VLVY W+S+A +V    W T         AR      RF VR+VAMPFLDSI+ +  AF +GL LT +EF+V   +YHVY  D++ S  +LV   +A+ C++
Sbjct:   56 ALFFLSGVGFVRRLLVVLQLSVLVEAFSTATGEVYSRKLGFVRVVEPLFEAALHLLLQLHAILVPWNEEPPSPNTFLAPFRSVFISVGSQSYAVTDNSSVEGLKAA-ATPVGDVSNWCSRCSRPSCCWPTWCPWSGTRLPFSRAPTKGELNLGCLGKMHPQTQVWVCFLYHIVEVVSRFIPLAFLILLTRPWFIGVLVYFWLSQAALVGWMAWQTDDRRSRLNAARDEFSSLRFKVRVVAMPFLDSIISQEEAFVVGLWLTDLEFVVYTTLYHVYPSDEVASHDQLVFTIIAAICLL 351          
BLAST of mRNA_E-siliculosus-1a_F_contig1174.1127.1 vs. uniprot
Match: A0A6H5K6W6_9PHAE (HTH psq-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K6W6_9PHAE)

HSP 1 Score: 184 bits (468), Expect = 4.640e-49
Identity = 133/298 (44.63%), Postives = 157/298 (52.68%), Query Frame = 1
Query:    4 SLFCLSGIGWFRRFLVATQLSLLAEALITLTKADYSPVLALVRVIEPLFKSVPQLLLQLHAILWLWTETSFTSSRLAWR-------------------------VVSVCISAASLAYAATDVSSVERLLTCDGGKDGERFRLCPCFPSLTGLVFGRVPAGGASSLRGLGNVHPRSHVWLCLVYHVLEIVARFVPLAMLVLVVRGWFFFVLVYLWVSRALIVWMTA-RQALGFRFWVRLVAMPFLDSIVDETTAFGIGLGLTLVEFIVCMVIYHVYKHDDLPSRARLVLVTVASCCMVG 819
            S+F LSG  W+RR LVAT LSL+ EA  T+    YSPVLALVRV+EPLF+SVPQLLLQL+A+L LWTET  +  RL WR                         V SVCIS ASLAYAATDVSSVE L T    + GE                                                  V+ FV LAM   V+R W   VL+YLW+SR +IV + A + +L FRF VRLVAMPF DSIVD    F   L  TL+EF++C+ +YH Y  DDL + AR  L  V   CMVG
Sbjct:  108 SIFFLSGFQWYRRVLVATHLSLIYEAWTTVGDEQYSPVLALVRVVEPLFESVPQLLLQLYAMLILWTETMLSHGRLVWRXXXXXXXXXXXXXXXXXXXXXXXXXVGSVCISVASLAYAATDVSSVEFLAT----QTGE--------------------------------------------------VSYFVSLAMFFTVIRKWSSLVLLYLWMSRGVIVXIWASKTSLDFRFRVRLVAMPFTDSIVDGAVVFRGALVWTLLEFMLCLALYHAYAQDDLSASARRALTIVVCSCMVG 351          
BLAST of mRNA_E-siliculosus-1a_F_contig1174.1127.1 vs. uniprot
Match: A0A6H5JX78_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JX78_9PHAE)

HSP 1 Score: 159 bits (402), Expect = 1.060e-42
Identity = 106/221 (47.96%), Postives = 137/221 (61.99%), Query Frame = 1
Query:  421 LRGLGNVHPRSHVWLCLVYHVLEIVARFVPLAMLVLVVRGWFFFVLVYLWVSRALIVWMTARQAL-GFRFWVRLVAMPFLDSIVDETTAFGIGLGLTLVEFIVCMVIYHVYKHDDLPSRARLVLVTVASCCMVGKMCLAWVAICPLKVDGDYPESQGDGV-LGDGRGSAMTDGCVADVEMSAIEDGKVEGGA-EARAVSEAASPKGADGPSVTSAVSTGSV 1074
            +RG G+VH R+HV  C VYHVLEI  RF+PL ML++++R WF  VL YLW++R ++V  + R+A+  FRF VR VAMPFLDSI+D   AF  G  LTLV+ IV M  +  + HDDL    RL+LV V++ CM+GKM LAWVAI  LK      E   DG  + D RG     G  AD +M+ +EDG   G   EA  +SE    +G + P  T+  S GSV
Sbjct:    1 MRGSGDVHARTHVRFCFVYHVLEIGHRFLPLVMLLVLIRWWFILVLAYLWIARGVVVQWSDRKAVRAFRFRVRFVAMPFLDSILDGAAAFKAGFVLTLVKSIVFMASFLKFSHDDLSDSLRLMLVVVSAGCMLGKMFLAWVAIPLLK------EKDSDGAAVEDERG-----GEAADSDMTGVEDGTANGEVKEASTLSELGPKEGTNVPPATNGRSAGSV 210          
BLAST of mRNA_E-siliculosus-1a_F_contig1174.1127.1 vs. uniprot
Match: A0A6H5JIQ5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JIQ5_9PHAE)

HSP 1 Score: 166 bits (421), Expect = 3.130e-42
Identity = 115/282 (40.78%), Postives = 164/282 (58.16%), Query Frame = 1
Query:   31 WFRRFLVATQLSLLAEALITLTKADYSPVLALVRVIEPLFKSVPQLLLQLHAILWLWTETSFTSSRLAWRVVSVCISAASLAYAATDVSSVERLLTCDGGKDGERFRLCPCFPSLTGLVFGRVPAGGASSL-RGLGNVHPRSHVWLCLVYHVLEIVARFVPLAMLVLVVRGWFFFVLVYLWVSRALIV--WMTARQALGFRFWVRLVAMPFLDSIVDETTAFGIGLGLTLVEFIVCMVIYHVYKHDD---LPSRARLVLVTVASCCMVGKMCLAWVAICPLK 858
            W RR LVA QL +L  AL++   + YSPVLA +RV+EPL++SVPQL+LQL+ +L  W      +  L+ R++S+  S  SLAYA T + + + L       D        C P LTGLVFG VPA  + ++ R   N   +  VW  L Y VLEI A+F+ L +L LV R +FF  L +LW SRA ++   +    +L  R   RLV MPF+DS++D    + +G  LT VEF+ C+ I +++  D+   LP+    V   VA+ CMVGK+CL ++ + P K
Sbjct:  120 WLRRVLVALQLGMLFGALVSWGTSSYSPVLASLRVMEPLYESVPQLMLQLYGLLLEWDNDG--TMWLSRRLLSILFSCFSLAYATTGLVAEQALSRLAPTADAAS---ASC-PGLTGLVFGAVPANSSVAVYRSRWN--SQKFVWAFLFYQVLEIGAKFISLGLLALVWRAYFFLALFWLWGSRAYVLRRLIAGEHSLRVRSQFRLVGMPFMDSVMDVLQTYDVGCALTTVEFVFCLTIGNMFYTDEGGQLPTDVGRVWTYVAAVCMVGKLCLGYLIVRPFK 393          
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig1174.1127.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 12
Match NameE-valueIdentityDescription
D8LBY3_ECTSI3.510e-26489.50Hypothetical leucine rich repeat protein n=1 Tax=E... [more]
A0A6H5JJ93_9PHAE2.470e-23686.67Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JL60_9PHAE1.190e-19878.27Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LFI4_ECTSI4.350e-9963.79Leucine Rich Repeat protein n=1 Tax=Ectocarpus sil... [more]
A0A6H5K7Q2_9PHAE1.180e-9763.10Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KD04_9PHAE2.560e-8945.72Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JCI0_9PHAE4.830e-5443.77Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K6W6_9PHAE4.640e-4944.63HTH psq-type domain-containing protein n=1 Tax=Ect... [more]
A0A6H5JX78_9PHAE1.060e-4247.96Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JIQ5_9PHAE3.130e-4240.78Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_F_contig1174contigE-siliculosus-1a_F_contig1174:10727..12043 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef902022-09-19
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female2021-02-24
Properties
Property NameValue
Start1
Stop1
Cds size1317
Model size1317
Exons1
Ec32 orthologEc-20_003745.1
Ec32 ortholog descriptionhypothetical protein
Hectar predicted targeting categorysignal peptide
Best eggNOG OGNA|NA|NA
Best tax levelEukaryota
COG Functional cat.S
EggNOG OGs2R960@2759,COG4886@1
EggNOG free text desc.regulation of response to stimulus
Seed eggNOG ortholog2880.D8LBY3
Seed ortholog evalue4e-216
Seed ortholog score757.3
Taxonomic scopeEukaryota
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927694.912829-CDS-E-siliculosus-1a_F_contig1174:10726..120431622927694.912829-CDS-E-siliculosus-1a_F_contig1174:10726..12043Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1174 10727..12043 -
1696318641.220637-CDS-E-siliculosus-1a_F_contig1174:10726..120431696318641.220637-CDS-E-siliculosus-1a_F_contig1174:10726..12043Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1174 10727..12043 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_F_contig1174.1127.1prot_E-siliculosus-1a_F_contig1174.1127.1Ectocarpus siliculosus Ec863f_EcPH12_90f femalepolypeptideE-siliculosus-1a_F_contig1174 10727..12043 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E-siliculosus-1a_F_contig1174.1127.1

>prot_E-siliculosus-1a_F_contig1174.1127.1 ID=prot_E-siliculosus-1a_F_contig1174.1127.1|Name=mRNA_E-siliculosus-1a_F_contig1174.1127.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=439bp
MSLFCLSGIGWFRRFLVATQLSLLAEALITLTKADYSPVLALVRVIEPLF
KSVPQLLLQLHAILWLWTETSFTSSRLAWRVVSVCISAASLAYAATDVSS
VERLLTCDGGKDGERFRLCPCFPSLTGLVFGRVPAGGASSLRGLGNVHPR
SHVWLCLVYHVLEIVARFVPLAMLVLVVRGWFFFVLVYLWVSRALIVWMT
ARQALGFRFWVRLVAMPFLDSIVDETTAFGIGLGLTLVEFIVCMVIYHVY
KHDDLPSRARLVLVTVASCCMVGKMCLAWVAICPLKVDGDYPESQGDGVL
GDGRGSAMTDGCVADVEMSAIEDGKVEGGAEARAVSEAASPKGADGPSVT
SAVSTGSVVRGPGDVKVEDETDGVETDGFVEGSDLTRMEDGKIDDGSKDG
GGSEVSPPEETHLPPSTHALSTISTVGGPDDAKVEDDL*
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mRNA from alignment at E-siliculosus-1a_F_contig1174:10727..12043-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E-siliculosus-1a_F_contig1174.1127.1 ID=mRNA_E-siliculosus-1a_F_contig1174.1127.1|Name=mRNA_E-siliculosus-1a_F_contig1174.1127.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=1317bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1174:10727..12043- (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
ATGTCCTTGTTCTGTCTCTCCGGCATTGGGTGGTTCCGTCGTTTCTTGGT GGCGACCCAGTTGAGCTTGCTAGCCGAAGCCTTGATAACTCTTACAAAGG CGGACTATTCCCCAGTTCTGGCGCTTGTGCGCGTCATTGAGCCACTTTTT AAATCGGTGCCCCAGTTGTTGCTCCAGCTGCATGCAATTCTTTGGCTCTG GACCGAGACATCGTTCACCTCTAGCCGCTTGGCATGGCGTGTGGTCTCCG TGTGCATCTCGGCGGCCAGCCTGGCGTATGCCGCCACCGATGTTTCCAGC GTAGAGAGGCTTTTGACTTGCGATGGCGGTAAGGATGGTGAGAGGTTTAG GCTTTGCCCATGCTTTCCTTCCCTGACGGGACTAGTGTTCGGTCGGGTGC CAGCGGGAGGAGCCTCCAGTTTGAGAGGGTTGGGCAACGTTCATCCGCGC AGTCACGTGTGGCTCTGCCTCGTGTACCACGTCCTCGAGATTGTTGCTCG CTTCGTCCCCCTGGCCATGCTAGTACTAGTGGTACGTGGGTGGTTTTTTT TTGTGTTGGTGTATCTGTGGGTAAGCCGGGCCTTGATAGTTTGGATGACA GCCAGACAAGCTCTGGGGTTTCGATTTTGGGTGAGGCTGGTGGCCATGCC CTTCTTGGACTCCATCGTGGACGAGACGACAGCGTTTGGAATTGGCCTGG GTTTGACGCTTGTGGAGTTCATCGTGTGCATGGTGATCTATCACGTGTAC AAGCACGATGACCTTCCCTCCCGCGCGAGGTTAGTGTTGGTTACAGTAGC CAGCTGCTGCATGGTCGGCAAGATGTGCTTGGCGTGGGTAGCAATATGCC CACTCAAGGTGGATGGGGATTATCCCGAAAGTCAAGGTGACGGTGTTCTT GGAGATGGACGAGGCAGCGCAATGACGGACGGATGTGTAGCAGACGTGGA GATGTCGGCGATCGAAGATGGCAAGGTGGAGGGCGGAGCAGAGGCGAGAG CGGTTTCTGAGGCCGCATCTCCGAAGGGAGCAGACGGGCCATCCGTCACC TCTGCCGTTTCGACGGGTTCGGTAGTACGCGGCCCGGGAGATGTCAAGGT AGAGGATGAAACGGATGGTGTCGAGACGGACGGGTTCGTAGAAGGGTCGG ATTTGACGAGAATGGAAGATGGCAAGATTGACGATGGGTCCAAGGATGGA GGAGGTTCTGAAGTGTCACCTCCTGAGGAAACGCATCTTCCGCCCTCAAC GCATGCTTTGTCCACGATTTCGACAGTAGGTGGCCCCGACGATGCTAAGG TGGAAGATGATTTGTAG
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Coding sequence (CDS) from alignment at E-siliculosus-1a_F_contig1174:10727..12043-

>mRNA_E-siliculosus-1a_F_contig1174.1127.1 ID=mRNA_E-siliculosus-1a_F_contig1174.1127.1|Name=mRNA_E-siliculosus-1a_F_contig1174.1127.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=2634bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1174:10727..12043- (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
ATGTCCTTGTTCTGTCTCTCCGGCATTGGGTGGTTCCGTCGTTTCTTGGT
GGCGACCCAGTTGAGCTTGCTAGCCGAAGCCTTGATAACTCTTACAAAGG
CGGACTATTCCCCAGTTCTGGCGCTTGTGCGCGTCATTGAGCCACTTTTT
AAATCGGTGCCCCAGTTGTTGCTCCAGCTGCATGCAATTCTTTGGCTCTG
GACCGAGACATCGTTCACCTCTAGCCGCTTGGCATGGCGTGTGGTCTCCG
TGTGCATCTCGGCGGCCAGCCTGGCGTATGCCGCCACCGATGTTTCCAGC
GTAGAGAGGCTTTTGACTTGCGATGGCGGTAAGGATGGTGAGAGGTTTAG
GCTTTGCCCATGCTTTCCTTCCCTGACGGGACTAGTGTTCGGTCGGGTGC
CAGCGGGAGGAGCCTCCAGTTTGAGAGGGTTGGGCAACGTTCATCCGCGC
AGTCACGTGTGGCTCTGCCTCGTGTACCACGTCCTCGAGATTGTTGCTCG
CTTCGTCCCCCTGGCCATGCTAGTACTAGTGGTACGTGGGTGGTTTTTTT
TTGTGTTGGTGTATCTGTGGGTAAGCCGGGCCTTGATAGTTTGGATGACA
GCCAGACAAGCTCTGGGGTTTCGATTTTGGGTGAGGCTGGTGGCCATGCC
CTTCTTGGACTCCATCGTGGACGAGACGACAGCGTTTGGAATTGGCCTGG
GTTTGACGCTTGTGGAGTTCATCGTGTGCATGGTGATCTATCACGTGTAC
AAGCACGATGACCTTCCCTCCCGCGCGAGGTTAGTGTTGGTTACAGTAGC
CAGCTGCTGCATGGTCGGCAAGATGTGCTTGGCGTGGGTAGCAATATGCC
CACTCAAGGTGGATGGGGATTATCCCGAAAGTCAAGGTGACGGTGTTCTT
GGAGATGGACGAGGCAGCGCAATGACGGACGGATGTGTAGCAGACGTGGA
GATGTCGGCGATCGAAGATGGCAAGGTGGAGGGCGGAGCAGAGGCGAGAG
CGGTTTCTGAGGCCGCATCTCCGAAGGGAGCAGACGGGCCATCCGTCACC
TCTGCCGTTTCGACGGGTTCGGTAGTACGCGGCCCGGGAGATGTCAAGGT
AGAGGATGAAACGGATGGTGTCGAGACGGACGGGTTCGTAGAAGGGTCGG
ATTTGACGAGAATGGAAGATGGCAAGATTGACGATGGGTCCAAGGATGGA
GGAGGTTCTGAAGTGTCACCTCCTGAGGAAACGCATCTTCCGCCCTCAAC
GCATGCTTTGTCCACGATTTCGACAGTAGGTGGCCCCGACGATGCTAAGG
TGGAAGATGATTTGTAGATGTCCTTGTTCTGTCTCTCCGGCATTGGGTGG
TTCCGTCGTTTCTTGGTGGCGACCCAGTTGAGCTTGCTAGCCGAAGCCTT
GATAACTCTTACAAAGGCGGACTATTCCCCAGTTCTGGCGCTTGTGCGCG
TCATTGAGCCACTTTTTAAATCGGTGCCCCAGTTGTTGCTCCAGCTGCAT
GCAATTCTTTGGCTCTGGACCGAGACATCGTTCACCTCTAGCCGCTTGGC
ATGGCGTGTGGTCTCCGTGTGCATCTCGGCGGCCAGCCTGGCGTATGCCG
CCACCGATGTTTCCAGCGTAGAGAGGCTTTTGACTTGCGATGGCGGTAAG
GATGGTGAGAGGTTTAGGCTTTGCCCATGCTTTCCTTCCCTGACGGGACT
AGTGTTCGGTCGGGTGCCAGCGGGAGGAGCCTCCAGTTTGAGAGGGTTGG
GCAACGTTCATCCGCGCAGTCACGTGTGGCTCTGCCTCGTGTACCACGTC
CTCGAGATTGTTGCTCGCTTCGTCCCCCTGGCCATGCTAGTACTAGTGGT
ACGTGGGTGGTTTTTTTTTGTGTTGGTGTATCTGTGGGTAAGCCGGGCCT
TGATAGTTTGGATGACAGCCAGACAAGCTCTGGGGTTTCGATTTTGGGTG
AGGCTGGTGGCCATGCCCTTCTTGGACTCCATCGTGGACGAGACGACAGC
GTTTGGAATTGGCCTGGGTTTGACGCTTGTGGAGTTCATCGTGTGCATGG
TGATCTATCACGTGTACAAGCACGATGACCTTCCCTCCCGCGCGAGGTTA
GTGTTGGTTACAGTAGCCAGCTGCTGCATGGTCGGCAAGATGTGCTTGGC
GTGGGTAGCAATATGCCCACTCAAGGTGGATGGGGATTATCCCGAAAGTC
AAGGTGACGGTGTTCTTGGAGATGGACGAGGCAGCGCAATGACGGACGGA
TGTGTAGCAGACGTGGAGATGTCGGCGATCGAAGATGGCAAGGTGGAGGG
CGGAGCAGAGGCGAGAGCGGTTTCTGAGGCCGCATCTCCGAAGGGAGCAG
ACGGGCCATCCGTCACCTCTGCCGTTTCGACGGGTTCGGTAGTACGCGGC
CCGGGAGATGTCAAGGTAGAGGATGAAACGGATGGTGTCGAGACGGACGG
GTTCGTAGAAGGGTCGGATTTGACGAGAATGGAAGATGGCAAGATTGACG
ATGGGTCCAAGGATGGAGGAGGTTCTGAAGTGTCACCTCCTGAGGAAACG
CATCTTCCGCCCTCAACGCATGCTTTGTCCACGATTTCGACAGTAGGTGG
CCCCGACGATGCTAAGGTGGAAGATGATTTGTAG
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