mRNA_E-siliculosus-1a_F_contig1174.1127.1 (mRNA) Ectocarpus siliculosus Ec863f_EcPH12_90f female
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Overview
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig1174.1127.1 vs. uniprot
Match: D8LBY3_ECTSI (Hypothetical leucine rich repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LBY3_ECTSI) HSP 1 Score: 749 bits (1934), Expect = 3.510e-264 Identity = 392/438 (89.50%), Postives = 411/438 (93.84%), Query Frame = 1
Query: 1 MSLFCLSGIGWFRRFLVATQLSLLAEALITLTKADYSPVLALVRVIEPLFKSVPQLLLQLHAILWLWTETSFTSSRLAWRVVSVCISAASLAYAATDVSSVERLLTCDGGKDGERFRLCPCFPSLTGLVFGRVPAGGASSLRGLGNVHPRSHVWLCLVYHVLEIVARFVPLAMLVLVVRGWFFFVLVYLWVSRALIVWMTARQALGFRFWVRLVAMPFLDSIVDETTAFGIGLGLTLVEFIVCMVIYHVYKHDDLPSRARLVLVTVASCCMVGKMCLAWVAICPLKVDGDYPESQGDGVLGDGRGSAMTDGCVADVEMSAIEDGKVEGGAEARAVSEAASPKGADGPSVTSAVSTGSVVRGPGDVKVEDETDGVETDGFVEGSDLTRMEDGKIDDGSKDGGGSEVSPPEETHLPPSTHALSTISTVGGPDDAKVEDDL 1314
MSLFCLSGIGWFRRFLVA QLSLLAEALITLTKADYSPVLALVRVIEPLF+SVPQLLLQLHA+LWLWTETSFTSSRLAWRVVSVCISAASLAYAATDVSSVERL TCDGGKDGERFRLCPCFPSLTGLVF RVPA G SSLRGLGNVHPRSHVWLCLVYHVLEIVARFVPLAML+LVVRGWFFFVLVYLWVSRAL+VWM AR+ LGFRFWVRLVAMPFLDSI+DETTAFGIGLGLTLVEFIVCMV+YHVYKHDDLPSRARLVLVTVASCCMVGKMCLA VAI PLKVDG+Y ESQGDGVLGDGRGSA+TDG VADVEMSAIED KV+GG EA VSE ASPKGADGPSVTSA+STGSV+RGPGDVK+EDETDG + D +GS+L RMEDGKI+DGSK GGSEVSPPE THLPP+TH LST+STVGG DDAKVEDDL
Sbjct: 457 MSLFCLSGIGWFRRFLVAAQLSLLAEALITLTKADYSPVLALVRVIEPLFESVPQLLLQLHAMLWLWTETSFTSSRLAWRVVSVCISAASLAYAATDVSSVERLSTCDGGKDGERFRLCPCFPSLTGLVFSRVPAQGTSSLRGLGNVHPRSHVWLCLVYHVLEIVARFVPLAMLLLVVRGWFFFVLVYLWVSRALMVWMAAREVLGFRFWVRLVAMPFLDSIMDETTAFGIGLGLTLVEFIVCMVVYHVYKHDDLPSRARLVLVTVASCCMVGKMCLALVAISPLKVDGNYSESQGDGVLGDGRGSAVTDGSVADVEMSAIEDSKVDGGVEASVVSEPASPKGADGPSVTSALSTGSVIRGPGDVKLEDETDGADADELEQGSELMRMEDGKIEDGSKAAGGSEVSPPEGTHLPPATHPLSTMSTVGGSDDAKVEDDL 894
BLAST of mRNA_E-siliculosus-1a_F_contig1174.1127.1 vs. uniprot
Match: A0A6H5JJ93_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJ93_9PHAE) HSP 1 Score: 664 bits (1713), Expect = 2.470e-236 Identity = 351/405 (86.67%), Postives = 367/405 (90.62%), Query Frame = 1
Query: 1 MSLFCLSGIGWFRRFLVATQLSLLAEALITLTKADYSPVLALVRVIEPLFKSVPQLLLQLHAILWLWTETSFTSSRLAWRVVSVCISAASLAYAATDVSSVERLLTCDGGKDGERFRLCPCFPSLTGLVFGRVPAGGASSLRGLGNVHPRSHVWLCLVYHVLEIVARFVPLAMLVLVVRGWFFFVLVYLWVSRALIVWMTARQALGFRFWVRLVAMPFLDSIVDETTAFGIGLGLTLVEFIVCMVIYHVYKHDDLPSRARLVLVTVASCCMVGKMCLAWVAICPLKVDGDYPESQGDGVLGDGRGSAMTDGCVADVEMSAIEDGKVEGGAEARAVSEAASPKGADGPSVTSAVSTGSVVRGPGDVKVEDETDGVETDGFVEGSDLTRMEDGKIDDGSKDGGGSEV 1215
MS FCLSG+GWFRRFLVATQLSLLAEALITL KADYSPVLALVRVI PLF+SVPQLLLQLHA+LWLWTETSF SSRLAWRVVSVCISAASLAYAATDVSSVERL TCDGG DGERFRLCPCFPSLTG+VF RVPA G SSLRG+G+VHPRSHVWLCLVYHVLEI ARFVPLAMLV VVRGWFFFVLVYLWV R LIVWMTAR+ LGFRFWVRLVAMPFLDSI+DETTAFGIGL LTLVEFIVCMVIYHVY +DDLPSRARLVLVTVASCCMVGKMCLAWVAI PLKVDG Y ESQGD VLGDGRGSA+TDG VADVEMSA+ED KV GAEA SEAASP G DGPS TSAVSTGS +R PGDV+VEDETDGVE D F +GSDLTRMEDG ++DGSK GGSEV
Sbjct: 110 MSAFCLSGVGWFRRFLVATQLSLLAEALITLQKADYSPVLALVRVIGPLFESVPQLLLQLHAMLWLWTETSFASSRLAWRVVSVCISAASLAYAATDVSSVERLSTCDGGMDGERFRLCPCFPSLTGVVFSRVPAEGTSSLRGVGDVHPRSHVWLCLVYHVLEIFARFVPLAMLVQVVRGWFFFVLVYLWVGRGLIVWMTAREVLGFRFWVRLVAMPFLDSIMDETTAFGIGLVLTLVEFIVCMVIYHVYMNDDLPSRARLVLVTVASCCMVGKMCLAWVAISPLKVDGHYSESQGDSVLGDGRGSAVTDGSVADVEMSAVEDSKVGDGAEASVTSEAASPHGEDGPSATSAVSTGSEIRSPGDVQVEDETDGVEADEFEQGSDLTRMEDGVVEDGSKAAGGSEV 514
BLAST of mRNA_E-siliculosus-1a_F_contig1174.1127.1 vs. uniprot
Match: A0A6H5JL60_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JL60_9PHAE) HSP 1 Score: 565 bits (1456), Expect = 1.190e-198 Identity = 317/405 (78.27%), Postives = 340/405 (83.95%), Query Frame = 1
Query: 1 MSLFCLSGIGWFRRFLVATQLSLLAEALITLTKADYSPVLALVRVIEPLFKSVPQLLLQLHAILWLWTETSFTSSRLAWRVVSVCISAASLAYAATDVSSVERLLTCDGGKDGERFRLCPCFPSLTGLVFGRVPAGGASSLRGLGNVHPRSHVWLCLVYHVLEIVARFVPLAMLVLVVRGWFFFVLVYLWVSRALIVWMTARQALGFRFWVRLVAMPFLDSIVDETTAFGIGLGLTLVEFIVCMVIYHVYKHDDLPSRARLVLVTVASCCMVGKMCLAWVAICPLKVDGDYPESQGDGVLGDGRGSAMTDGCVADVEMSAIEDGKVEGGAEARAVSEAASPKGADGPSVTSAVSTGSVVRGPGDVKVEDETDGVETDGFVEGSDLTRMEDGKIDDGSKDGGGSEV 1215
++LF LSG+G FRRFLVATQLSLLAEA T+ YSPVLALVRV+EPLF+SVPQLLLQL+A+L LW ETS +SSRLAWR VSVCIS ASLAYAATDVSSVERLLTC GG D ERFRL PC SLTGLVF RVPA G SSL+G+GNVHPRSHVWLC VYHVLEIVARFVPLAMLVLVVRGWF VLVYLWVSR L+V +T R+ L FRF VRLVAMPFLDSI+DETTAFG GL LTLVEFI+C+VIYHVYKHDDLPS ARLVLVTVASCCMVGKMCLAWV I PLKVDG+Y SQGDGVLGDGRGSA+TDG VADV KVEGG EA SEAASPKGADGPS TS V+ GSV R PGDVK+EDETDGVE FV SDLTR EDG I+DG+K GGSEV
Sbjct: 23 VALFVLSGVGPFRRFLVATQLSLLAEAWNTVGGQVYSPVLALVRVVEPLFESVPQLLLQLYAMLRLWPETSSSSSRLAWREVSVCISVASLAYAATDVSSVERLLTCGGGSDCERFRLGPCCSSLTGLVFSRVPAQGTSSLKGVGNVHPRSHVWLCFVYHVLEIVARFVPLAMLVLVVRGWFLLVLVYLWVSRVLMVRVT-REGLDFRFGVRLVAMPFLDSIMDETTAFGTGLVLTLVEFILCVVIYHVYKHDDLPSGARLVLVTVASCCMVGKMCLAWVTISPLKVDGNYSGSQGDGVLGDGRGSAVTDGSVADVXXXXXXXXKVEGGVEASVTSEAASPKGADGPSATSVVA-GSVARSPGDVKLEDETDGVEAGEFVHESDLTRTEDGNIEDGAKAAGGSEV 425
BLAST of mRNA_E-siliculosus-1a_F_contig1174.1127.1 vs. uniprot
Match: D8LFI4_ECTSI (Leucine Rich Repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LFI4_ECTSI) HSP 1 Score: 327 bits (837), Expect = 4.350e-99 Identity = 185/290 (63.79%), Postives = 218/290 (75.17%), Query Frame = 1
Query: 37 RRFLVATQLSLLAEALITLTKADYSPVLALVRVIEPLFKSVPQLLLQLHAILWLWTETSFTSSRLAWRVVSVCISAASLAYAATDVSSVERLL-TCDGGKDG-ERFRLCPCFPSLTGLVFGRVPAGGASSLRG-LGNVHPRSHVWLCLVYHVLEIVARFVPLAMLVLVVRGWFFFVLVYLWVSRALIVWMTA---RQALGFRFWVRLVAMPFLDSIVDETTAFGIGLGLTLVEFIVCMVIYHVYKHDDLPSRARLVLVTVASCCMVGKMCLAWVAICPLKVDGDYPESQG 888
RRFLVATQLSLL EA+ + YSPVLALVRVIEPLF+SVPQLLLQL+A+L LW+ETS ++S L RV+SVCIS SLAYAATDVSSVERLL T G+ G ERFR+CP PS+T LVF RVP G S L G +G VHPR+HVW C +YHVLEIV+RFVPL M+ LV+R WFF VL YLW+SR L+VW A +GFRF VR+VAMPF+DSI+D T AFG GL LTLVEF+ C+V YH++ D LP AR L ++ CCMVGKM LA +AI PLK + +SQG
Sbjct: 253 RRFLVATQLSLLLEAVFSAASRTYSPVLALVRVIEPLFESVPQLLLQLYAMLLLWSETSLSNSDLNGRVISVCISTVSLAYAATDVSSVERLLNTRLSGEGGTERFRMCPDCPSVTALVFSRVPEKGVSRLAGRMGWVHPRTHVWFCFLYHVLEIVSRFVPLTMIALVLRKWFFLVLPYLWISRCLVVWAAAYSGEATMGFRFRVRIVAMPFIDSILDGTRAFGAGLVLTLVEFVACIVTYHLFSSDHLPPHARWTLTIISICCMVGKMRLALLAIIPLKANERGLQSQG 542
BLAST of mRNA_E-siliculosus-1a_F_contig1174.1127.1 vs. uniprot
Match: A0A6H5K7Q2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K7Q2_9PHAE) HSP 1 Score: 321 bits (822), Expect = 1.180e-97 Identity = 183/290 (63.10%), Postives = 216/290 (74.48%), Query Frame = 1
Query: 37 RRFLVATQLSLLAEALITLTKADYSPVLALVRVIEPLFKSVPQLLLQLHAILWLWTETSFTSSRLAWRVVSVCISAASLAYAATDVSSVERLL-TCDGGKDG-ERFRLCPCFPSLTGLVFGRVPAGGASSLRG-LGNVHPRSHVWLCLVYHVLEIVARFVPLAMLVLVVRGWFFFVLVYLWVSRALIVWMTA---RQALGFRFWVRLVAMPFLDSIVDETTAFGIGLGLTLVEFIVCMVIYHVYKHDDLPSRARLVLVTVASCCMVGKMCLAWVAICPLKVDGDYPESQG 888
RRFLVATQLSLL EA+ + YSPVLALVRVIEPLF+SVPQLLLQL+A+L LW+ETS ++S L RV+SVCIS SLAYAATDVSSVERLL T G+ G ER R+CP P +TGLVF RVP G S L G +G VHPR+HVW C +YHVLEIV+RFVPL M+ LV+R WFF VL YLW+SR L+VW A +GFRF VR+VAMPF+DSI+D T AFG GL LTLV+F+ C+V YH++ LP AR L +A CCMVGKM LA +AI PLK + +SQG
Sbjct: 158 RRFLVATQLSLLLEAVFSAASRTYSPVLALVRVIEPLFESVPQLLLQLYAMLLLWSETSLSNSDLNGRVISVCISTVSLAYAATDVSSVERLLNTRLSGEGGTERSRMCPDCPFITGLVFSRVPEKGVSRLAGRMGWVHPRTHVWFCFLYHVLEIVSRFVPLTMIALVLRKWFFLVLPYLWISRCLVVWAAAYWGEATMGFRFRVRIVAMPFIDSILDGTRAFGAGLVLTLVKFVACIVTYHLFSSGHLPPHARWTLTIIAICCMVGKMRLALLAILPLKANEHGFQSQG 447
BLAST of mRNA_E-siliculosus-1a_F_contig1174.1127.1 vs. uniprot
Match: A0A6H5KD04_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KD04_9PHAE) HSP 1 Score: 290 bits (743), Expect = 2.560e-89 Identity = 203/444 (45.72%), Postives = 255/444 (57.43%), Query Frame = 1
Query: 25 IGWFRRFLVATQLSLLAEALITLTKADYSPVLALVRVIEPLFKSVPQLLLQLHAILWLWTETSFTSSRLAWRVVSVCISAASLAYAATDVSSVERLLTCDGGKDGERFRLCPCFPSLTGLVFGRVPAGGASSLRGLGNVHPRSHVWLCLVYHVLEIVARFVPLAMLVLVVRGWFFFVLVYLWVSRALI-----VWMTA----------RQALGFRFWVRLVAMPFLDSIVDETTAFGIGLGLTLVEFIVCMVIYHVYKHDDLPSRARLVLVTVASCCMVGKMCLAWVAICPLKVDGDYPESQGDGVLGDGRGSAM----------TDGCVADVEMSAIEDGKVEGGAEARAVSEAASPKGADGPSVTSAVSTGSVVRGPGDVKVEDETDGVETDGFVEGSDLTRMEDGKIDDGSKDGGGSEVSPPEETHLPPSTHALSTISTVG 1281
+ W RR LVATQLSLL EA + K ++P+L +VR+IE LF+SVPQLLLQL+A L LW+ R R+ SVCISA SLAY ATD+ S +RL C +G +CPC LTGL F RVP G+S L G G+VHPR+HVWLCL+YH+LEIV+RFVPLAML LV+R WFF VL YLW SR + W R+++ R V+LVAMPFLDS++D + AFG+GL +TLVEFIVC+VIYH+Y HDDLP+ RL L VAS CMVGK+ LA +AI PL+ D D P G V GSA+ +G VA + I++GKV+ E P G ++A + +V G DG VE + + SE +P E LPP+THALST S G
Sbjct: 124 VPWVRRVLVATQLSLLVEAWRNVAKRRFTPILEVVRLIEALFESVPQLLLQLYAALLLWSSPE----RNVLRLGSVCISAGSLAYNATDLFSAKRLERCSDPLEGG---ICPCCSWLTGLPFSRVPEKGSSRLNGWGDVHPRTHVWLCLLYHILEIVSRFVPLAMLALVMRKWFFLVLPYLWWSRYAVRKKAAAWTRKSTRETDKARPRKSVTERVRVKLVAMPFLDSVMDGSAAFGLGLVVTLVEFIVCVVIYHLYNHDDLPTNLRLGLYVVASSCMVGKLLLAALAIFPLRADEDGPGIFGSAVASS-SGSALGGPSETVGDVDEGVVALANVMEIDEGKVD---------ELERPSGTPLAGASAAAVSEAVEGG--------------LDGDVENALI-----------------SERAPSEGMRLPPTTHALSTPSPNG 519
BLAST of mRNA_E-siliculosus-1a_F_contig1174.1127.1 vs. uniprot
Match: A0A6H5JCI0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCI0_9PHAE) HSP 1 Score: 194 bits (493), Expect = 4.830e-54 Identity = 130/297 (43.77%), Postives = 172/297 (57.91%), Query Frame = 1
Query: 4 SLFCLSGIGWFRRFLVATQLSLLAEALITLTKADYSPVLALVRVIEPLFKSVPQLLLQLHAILWLWTETSFTSSRLAWRVVSVCISAASLAYAATDVSSVERLLTCDGGKDGERFRLCP-------CFP-----SLTGLVFGRVPAGGASSLRGLGNVHPRSHVWLCLVYHVLEIVARFVPLAMLVLVVRGWFFFVLVYLWVSRALIV----WMT---------ARQALG-FRFWVRLVAMPFLDSIVDETTAFGIGLGLTLVEFIVCMVIYHVYKHDDLPSRARLVLVTVASCCMV 816
+LF LSG+G+ RR LV QLS+L EA T T YS L VRV+EPLF++ LLLQLHAIL W E + + SV IS S +YA TD SSVE L G+ C C+P S T L F R P G +L LG +HP++ VW+C +YH++E+V+RF+PLA L+L+ R WF VLVY W+S+A +V W T AR RF VR+VAMPFLDSI+ + AF +GL LT +EF+V +YHVY D++ S +LV +A+ C++
Sbjct: 56 ALFFLSGVGFVRRLLVVLQLSVLVEAFSTATGEVYSRKLGFVRVVEPLFEAALHLLLQLHAILVPWNEEPPSPNTFLAPFRSVFISVGSQSYAVTDNSSVEGLKAA-ATPVGDVSNWCSRCSRPSCCWPTWCPWSGTRLPFSRAPTKGELNLGCLGKMHPQTQVWVCFLYHIVEVVSRFIPLAFLILLTRPWFIGVLVYFWLSQAALVGWMAWQTDDRRSRLNAARDEFSSLRFKVRVVAMPFLDSIISQEEAFVVGLWLTDLEFVVYTTLYHVYPSDEVASHDQLVFTIIAAICLL 351
BLAST of mRNA_E-siliculosus-1a_F_contig1174.1127.1 vs. uniprot
Match: A0A6H5K6W6_9PHAE (HTH psq-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K6W6_9PHAE) HSP 1 Score: 184 bits (468), Expect = 4.640e-49 Identity = 133/298 (44.63%), Postives = 157/298 (52.68%), Query Frame = 1
Query: 4 SLFCLSGIGWFRRFLVATQLSLLAEALITLTKADYSPVLALVRVIEPLFKSVPQLLLQLHAILWLWTETSFTSSRLAWR-------------------------VVSVCISAASLAYAATDVSSVERLLTCDGGKDGERFRLCPCFPSLTGLVFGRVPAGGASSLRGLGNVHPRSHVWLCLVYHVLEIVARFVPLAMLVLVVRGWFFFVLVYLWVSRALIVWMTA-RQALGFRFWVRLVAMPFLDSIVDETTAFGIGLGLTLVEFIVCMVIYHVYKHDDLPSRARLVLVTVASCCMVG 819
S+F LSG W+RR LVAT LSL+ EA T+ YSPVLALVRV+EPLF+SVPQLLLQL+A+L LWTET + RL WR V SVCIS ASLAYAATDVSSVE L T + GE V+ FV LAM V+R W VL+YLW+SR +IV + A + +L FRF VRLVAMPF DSIVD F L TL+EF++C+ +YH Y DDL + AR L V CMVG
Sbjct: 108 SIFFLSGFQWYRRVLVATHLSLIYEAWTTVGDEQYSPVLALVRVVEPLFESVPQLLLQLYAMLILWTETMLSHGRLVWRXXXXXXXXXXXXXXXXXXXXXXXXXVGSVCISVASLAYAATDVSSVEFLAT----QTGE--------------------------------------------------VSYFVSLAMFFTVIRKWSSLVLLYLWMSRGVIVXIWASKTSLDFRFRVRLVAMPFTDSIVDGAVVFRGALVWTLLEFMLCLALYHAYAQDDLSASARRALTIVVCSCMVG 351
BLAST of mRNA_E-siliculosus-1a_F_contig1174.1127.1 vs. uniprot
Match: A0A6H5JX78_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JX78_9PHAE) HSP 1 Score: 159 bits (402), Expect = 1.060e-42 Identity = 106/221 (47.96%), Postives = 137/221 (61.99%), Query Frame = 1
Query: 421 LRGLGNVHPRSHVWLCLVYHVLEIVARFVPLAMLVLVVRGWFFFVLVYLWVSRALIVWMTARQAL-GFRFWVRLVAMPFLDSIVDETTAFGIGLGLTLVEFIVCMVIYHVYKHDDLPSRARLVLVTVASCCMVGKMCLAWVAICPLKVDGDYPESQGDGV-LGDGRGSAMTDGCVADVEMSAIEDGKVEGGA-EARAVSEAASPKGADGPSVTSAVSTGSV 1074
+RG G+VH R+HV C VYHVLEI RF+PL ML++++R WF VL YLW++R ++V + R+A+ FRF VR VAMPFLDSI+D AF G LTLV+ IV M + + HDDL RL+LV V++ CM+GKM LAWVAI LK E DG + D RG G AD +M+ +EDG G EA +SE +G + P T+ S GSV
Sbjct: 1 MRGSGDVHARTHVRFCFVYHVLEIGHRFLPLVMLLVLIRWWFILVLAYLWIARGVVVQWSDRKAVRAFRFRVRFVAMPFLDSILDGAAAFKAGFVLTLVKSIVFMASFLKFSHDDLSDSLRLMLVVVSAGCMLGKMFLAWVAIPLLK------EKDSDGAAVEDERG-----GEAADSDMTGVEDGTANGEVKEASTLSELGPKEGTNVPPATNGRSAGSV 210
BLAST of mRNA_E-siliculosus-1a_F_contig1174.1127.1 vs. uniprot
Match: A0A6H5JIQ5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JIQ5_9PHAE) HSP 1 Score: 166 bits (421), Expect = 3.130e-42 Identity = 115/282 (40.78%), Postives = 164/282 (58.16%), Query Frame = 1
Query: 31 WFRRFLVATQLSLLAEALITLTKADYSPVLALVRVIEPLFKSVPQLLLQLHAILWLWTETSFTSSRLAWRVVSVCISAASLAYAATDVSSVERLLTCDGGKDGERFRLCPCFPSLTGLVFGRVPAGGASSL-RGLGNVHPRSHVWLCLVYHVLEIVARFVPLAMLVLVVRGWFFFVLVYLWVSRALIV--WMTARQALGFRFWVRLVAMPFLDSIVDETTAFGIGLGLTLVEFIVCMVIYHVYKHDD---LPSRARLVLVTVASCCMVGKMCLAWVAICPLK 858
W RR LVA QL +L AL++ + YSPVLA +RV+EPL++SVPQL+LQL+ +L W + L+ R++S+ S SLAYA T + + + L D C P LTGLVFG VPA + ++ R N + VW L Y VLEI A+F+ L +L LV R +FF L +LW SRA ++ + +L R RLV MPF+DS++D + +G LT VEF+ C+ I +++ D+ LP+ V VA+ CMVGK+CL ++ + P K
Sbjct: 120 WLRRVLVALQLGMLFGALVSWGTSSYSPVLASLRVMEPLYESVPQLMLQLYGLLLEWDNDG--TMWLSRRLLSILFSCFSLAYATTGLVAEQALSRLAPTADAAS---ASC-PGLTGLVFGAVPANSSVAVYRSRWN--SQKFVWAFLFYQVLEIGAKFISLGLLALVWRAYFFLALFWLWGSRAYVLRRLIAGEHSLRVRSQFRLVGMPFMDSVMDVLQTYDVGCALTTVEFVFCLTIGNMFYTDEGGQLPTDVGRVWTYVAAVCMVGKLCLGYLIVRPFK 393 The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig1174.1127.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90) Total hits: 12
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-siliculosus-1a_F_contig1174.1127.1 >prot_E-siliculosus-1a_F_contig1174.1127.1 ID=prot_E-siliculosus-1a_F_contig1174.1127.1|Name=mRNA_E-siliculosus-1a_F_contig1174.1127.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=439bp MSLFCLSGIGWFRRFLVATQLSLLAEALITLTKADYSPVLALVRVIEPLFback to top mRNA from alignment at E-siliculosus-1a_F_contig1174:10727..12043- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-siliculosus-1a_F_contig1174.1127.1 ID=mRNA_E-siliculosus-1a_F_contig1174.1127.1|Name=mRNA_E-siliculosus-1a_F_contig1174.1127.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=1317bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1174:10727..12043- (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top Coding sequence (CDS) from alignment at E-siliculosus-1a_F_contig1174:10727..12043- >mRNA_E-siliculosus-1a_F_contig1174.1127.1 ID=mRNA_E-siliculosus-1a_F_contig1174.1127.1|Name=mRNA_E-siliculosus-1a_F_contig1174.1127.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=2634bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1174:10727..12043- (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top |