mRNA_E-siliculosus-1a_F_contig1172.1121.1 (mRNA) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E-siliculosus-1a_F_contig1172.1121.1
Unique NamemRNA_E-siliculosus-1a_F_contig1172.1121.1
TypemRNA
OrganismEctocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig1172.1121.1 vs. uniprot
Match: D8LHX1_ECTSI (N/a n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LHX1_ECTSI)

HSP 1 Score: 634 bits (1635), Expect = 3.300e-216
Identity = 308/326 (94.48%), Postives = 320/326 (98.16%), Query Frame = 1
Query:    1 VIYGCRSGLTFMFVRSLKDAIYGQVWDALEVRLHSGGGVIFYTPVLDERGVPRRFAVKRMPKATIARLLPTMQENPMREAAFLTLVQDPGHPNVVGLAAALEDDTTVYLVTPFVGGVGSGEMFDWVADNYQNPAPEATIMPLLHQIVDGTRYVHSKGICHADMSLENTLVNSAHTEAFIIDFGMALQMPTDEAGQRFMSVPDRRKAKRSYCPPETYKGRQ-YDGVKVDVFSVGCMGFMMFTGIPPFDYASRLDRKFRKVVYEGDLQGYLAEYGMPPLPDPVFQLLRRMMSYQPENRPLPVEVLENPWFAPLGYAQQPQAAAPAMNA 975
            +IYGC SGLTFMFVRSLKDAIYGQVWDA+EVRLHSGGGV FYTPVLDERGVPRRFAVKRMPK TIARLLPTMQENPMREAAFLTLVQDPGHPNVVGLAAAL+DDTTVYLVTPFVGGVGSGEMFDWVADNYQNPAPEATIMPLL+QIVDGTRYVHSKGICHADMSLENTLVNSAHTEAF+IDFGMALQMPTDEAGQRFMSVPDRR+AKRSYCPPETYKGRQ YDGVKVD+FSVGCMGFM+FTGIPPFDYASRLDRKFRKVV++GDLQGYLA+Y MP LPDPVFQLLRRMMSYQPENRPLPVEVLE+PWFAPLGYAQQPQAAAPAMNA
Sbjct:   14 LIYGCSSGLTFMFVRSLKDAIYGQVWDAIEVRLHSGGGVDFYTPVLDERGVPRRFAVKRMPKETIARLLPTMQENPMREAAFLTLVQDPGHPNVVGLAAALQDDTTVYLVTPFVGGVGSGEMFDWVADNYQNPAPEATIMPLLYQIVDGTRYVHSKGICHADMSLENTLVNSAHTEAFMIDFGMALQMPTDEAGQRFMSVPDRRRAKRSYCPPETYKGRQPYDGVKVDMFSVGCMGFMLFTGIPPFDYASRLDRKFRKVVFQGDLQGYLADYEMPLLPDPVFQLLRRMMSYQPENRPLPVEVLEDPWFAPLGYAQQPQAAAPAMNA 339          
BLAST of mRNA_E-siliculosus-1a_F_contig1172.1121.1 vs. uniprot
Match: A0A6H5L877_9PHAE (Protein kinase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L877_9PHAE)

HSP 1 Score: 603 bits (1555), Expect = 3.580e-204
Identity = 297/326 (91.10%), Postives = 309/326 (94.79%), Query Frame = 1
Query:    1 VIYGCRSGLTFMFVRSLKDAIYGQVWDALEVRLHSGGGVIFYTPVLDERGVPRRFAVKRMPKATIARLLPTMQENPMREAAFLTLVQDPGHPNVVGLAAALEDDTTVYLVTPFVGGVGSGEMFDWVADNYQNPAPEATIMPLLHQIVDGTRYVHSKGICHADMSLENTLVNSAHTEAFIIDFGMALQMPTDEAGQRFMSVPDRRKAKRSYCPPETYKGRQ-YDGVKVDVFSVGCMGFMMFTGIPPFDYASRLDRKFRKVVYEGDLQGYLAEYGMPPLPDPVFQLLRRMMSYQPENRPLPVEVLENPWFAPLGYAQQPQAAAPAMNA 975
            V+    SGLTFMFVRSLKDAIYGQVWDALEVRLH+GGGV FYT VLDERGVPRRFAVKRM KATIARL PT+QENPMREAAFLTLVQDPGHPNVVGLAAALEDDTTVYLVTPFVGGVGSGEMFDWVADNYQNPAPEATIMPLL QIVDGTRYVHSKGICHADMSLENTLVNSAHTEAFIIDFGMA QMPT+E GQRFMSVPD R+AKRSYCPPETYKGR+ YDGVKVDVFSVGCMGFMMFTGIPPFDYASRLDRKFR+VV+ GDLQGYLA+YGMPPLPD VF LL+ MMSY+PE+RPLPVEVLENPWFAPLGYAQQPQAAAPAMNA
Sbjct:   17 VVEAHESGLTFMFVRSLKDAIYGQVWDALEVRLHNGGGVTFYTSVLDERGVPRRFAVKRMLKATIARLQPTIQENPMREAAFLTLVQDPGHPNVVGLAAALEDDTTVYLVTPFVGGVGSGEMFDWVADNYQNPAPEATIMPLLRQIVDGTRYVHSKGICHADMSLENTLVNSAHTEAFIIDFGMAQQMPTNEHGQRFMSVPDGRRAKRSYCPPETYKGREPYDGVKVDVFSVGCMGFMMFTGIPPFDYASRLDRKFRRVVFHGDLQGYLADYGMPPLPDQVFGLLQGMMSYRPEDRPLPVEVLENPWFAPLGYAQQPQAAAPAMNA 342          
BLAST of mRNA_E-siliculosus-1a_F_contig1172.1121.1 vs. uniprot
Match: A0A1Z5JDY4_FISSO (Protein kinase domain-containing protein n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JDY4_FISSO)

HSP 1 Score: 143 bits (360), Expect = 6.680e-33
Identity = 104/331 (31.42%), Postives = 161/331 (48.64%), Query Frame = 1
Query:   10 GCRSGLTFMFVRSLKDAIYGQVWDALEVRLHSG---------GGV---IFYTPVLDERGVPRRFAVKRMPKATIARLLPTMQENPMREAAFLTLVQDPGHPNVVGLAAALEDDTTVYLVTPFVGGVGSGEMFDWVADNYQNPAPEATIMPLL-----HQIVDGTRYVHSKGICHADMSLENTLVNSAHTEAFIIDFGMALQMPTDEAGQRFMSV----------PDRRKAKRSYCPPETYKGRQ-YDGVKVDVFSVGCMGFMMFTGIPPFDYASRLDRKFRKVVYEGDLQGYLAEYGMPPLPDPVFQLLRRMMSYQPENRPLPVEVLENPW 918
            G    L +   R L+DAIYG VW  L +R H G          GV       PV+ E    R  AVK +  A + R+   + E+P++E A + ++    HP+V+G    L+D   +Y + P+      G++F  V ++ +    E  +   +      QI+ G  ++ S+GICH D+SLEN LVN       IID GM L++P D+       V          P     K +Y  PE +   + +DG  +D+++ G + ++M TG PP+D ASR D+++  +V  G L   L  + +  L D V  LL+ M+   P+ R    EVLE+PW
Sbjct:   65 GSSEALAYWPQRRLQDAIYGSVWACLVLRRHFGVAADDAARAAGVQPGSPNAPVVWEITEGRHVAVKMVEWARVHRMRGRLLEDPVKEVAAMQMLGSTPHPHVLGTMEVLQDGECLYSIMPYCR---DGDLFGVVVEHAEENGGEIGMAEPVARYWFRQILWGLHHLQSEGICHRDLSLENVLVNG--DVCMIIDMGMCLRVPYDDGAGAVTDVHKGVIRRLIKPQGVCGKHNYMSPEVFANAEDFDGFAIDLWAAGVVLYIMLTGFPPYDQASRADKRYELIV-TGKLVEQLRNWDIY-LSDEVGHLLQAMLQEDPKKRLTLAEVLEHPW 388          
BLAST of mRNA_E-siliculosus-1a_F_contig1172.1121.1 vs. uniprot
Match: A0A7S2UUC5_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UUC5_9STRA)

HSP 1 Score: 140 bits (352), Expect = 2.190e-32
Identity = 103/322 (31.99%), Postives = 163/322 (50.62%), Query Frame = 1
Query:   19 SGLTFMFVRSLKDAIYGQVWDALEVRLHSGGGVIFYTPVLDERGVPRRF-AVKRMPKATIARLLPTMQENPMREAA---FLTLVQDP---------------GHPNVVGLAAALEDDTTVYLVTPFVGGVGSGEMFDWVADNYQNPAPEATIMPLLHQIVDGTRYVHSKGICHADMSLENTLVNSAHTEAFIIDFGMALQMPTDEA-GQRFMSVPDRRKAKRSYCPPETYKG-RQYDGVKVDVFSVGCMGFMMFTGIPPFDYASRLDRKFRKVVYEGDLQGYLAEYGMPPLPDPVFQLLRRMMSYQPENRPLPVEVLENPWF 921
            SG  ++ VR+L++ IYG+V  A+ + +  G GV  Y          R + A+K M K  I  L     E+P++E A   FL+   +                GHPNV+ L   ++D+  VY V P+ G     E+F +V    Q    E        +I+ GT Y+HS+G+CH D+SLEN LV+       IID GM L+MP D+  G+  +  P  +  KR+Y  PE +   R + G  +D ++ G + F+M TG+PPF+ A+ +D +F+ ++    L   L+ + +   P+ V  LL RM+   P+ R    E++ +PW 
Sbjct:   44 SGNVYLLVRTLRECIYGKVKHAIRI-VDVGNGVYEYG---------REYVAIKVMFKRKIQELRGRHNEDPIKEIAAMQFLSTAPEGVEGTKQGEGESTHQGGHPNVLPLLECVQDEDLVYCVMPYCGA----ELFSFVEQ--QGAFLEDRARQYFREILCGTNYLHSRGVCHRDLSLENVLVSQ--NTCIIIDMGMCLRMPVDQTTGKHLLINPQGQCGKRNYMSPEIFLNKRPFSGEAIDFWACGIILFIMLTGVPPFETATEVDPRFQ-MISSWRLSEMLSLWEINLSPEAV-DLLSRMLRPNPQERLKYEEIMAHPWM 345          
BLAST of mRNA_E-siliculosus-1a_F_contig1172.1121.1 vs. uniprot
Match: A0A7S0CIM8_9STRA (Hypothetical protein n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0CIM8_9STRA)

HSP 1 Score: 130 bits (327), Expect = 9.920e-29
Identity = 104/317 (32.81%), Postives = 156/317 (49.21%), Query Frame = 1
Query:   31 FMFVRSLKDAIYGQVWDALEVRLHSGGGVIFYTPVLDERGV-PRRFAVKRMPKATIARLLPTMQENPMREAA---FLTLVQD---PGHPNVVGLAAALEDDTTVYLVTPFVGGVGSGEMFDWVADNYQNPAPEATIMPLLHQIVDGTRYVHSKGICHADMSLENTLVNSAHTEAFIIDFGMALQMP----------TDEAGQ--RFMSVPDRRKAKRSYCPPETYKGR-QYDGVKVDVFSVGCMGFMMFTGIPPFDYASRLDRKFRKVVYEGDLQGYLAEYGMPPLPDPVFQLLRRMMSYQPENRPLPVEVLENPWF 921
            F   R LK AIYG V     +RL          PV     + P+  AVK M +  + +L     E+P++E +   FL+L +D     HPNV+   A L+DD  +Y   PF      GE+F +V  + +   P A       QI+ G  Y+  KG+CH DMSLEN LV+  H  A +ID GM L++P           D +G   R +  P     K +Y  PE    +  +DG  +DV++ G + F+M  G+PPFD+AS  D +FR +   G L   + ++G   + +    LL+RM++  P  R   +EV+++ W 
Sbjct:   73 FWIGRKLKKAIYGCVRSCTILRLRD--------PVNQTWEITPQMAAVKLMDRNIVNQLRGRHIEDPIKELSCSQFLSLGEDGEPQRHPNVMSSLAVLQDDQYIYFFMPFCN---CGELFGYVERDGRFAEPVARHW--FRQILGGIYYLQKKGVCHRDMSLENLLVDR-HALALVIDMGMCLRVPFGSEDGSEPAIDVSGNTLRRLISPQTACGKPNYISPEVLSSQVPFDGFAIDVWAAGVILFIMLIGLPPFDWASDDDPRFRMIT-NGRLVAMVRQWGRD-ISEDAGDLLQRMLTRDPSERLSLMEVMDHRWI 373          
BLAST of mRNA_E-siliculosus-1a_F_contig1172.1121.1 vs. uniprot
Match: B7G286_PHATC (Predicted protein n=3 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7G286_PHATC)

HSP 1 Score: 130 bits (326), Expect = 2.630e-28
Identity = 95/322 (29.50%), Postives = 156/322 (48.45%), Query Frame = 1
Query:   43 RSLKDAIYGQVWDALEVRLHSG---------GGV---IFYTPVLDERGVPRRFAVKRMPKATIARLLPTMQENPMREAAFLTLVQDPGHPNVVGLAAALEDDTTVYLVTPFVGGVGSGEMFDWVADNYQNPA-----PEATIMPLLHQIVDGTRYVHSKGICHADMSLENTLVNSAHTEAFIIDFGMALQMPTDE------------AGQRFMSVPDRRKAKRSYCPPETYKGRQ-YDGVKVDVFSVGCMGFMMFTGIPPFDYASRLDRKFRKVVYEGDLQGYLAEYGMPPLPDPVFQLLRRMMSYQPENRPLPVEVLENPW 918
            R L+DAIYG VW  L +R H G          GV       P++ E    +  A+K +  A +  +   + E+P++E A + L+    HPNV+G    L+D   +Y + P+      G++F  V    ++       PE        QI+ G  ++ ++G+CH D+SLEN LV+       IID GM L++P ++               R +  P     K +Y  PE +     +DG  +D+++ G + ++M TG PP+D ASR D++F +++  G L   L  + +  L +    LL+RM++  P  RP   E+L +PW
Sbjct:  101 RRLQDAIYGSVWACLVLRRHHGIAADDAARAAGVEPGSASAPIVWEIS-GQHVAIKMVEWARVHHMRGRLLEDPVKEVAAMQLL-GARHPNVLGSTEVLQDGDFLYSIMPYCR---DGDLFGVVVQYAEDSGGESGMPEPVARFWFRQILWGLHHLQTQGVCHRDLSLENILVDG--DRCMIIDMGMCLRVPYNDPHKPGAVTDVTRGSTRRLMRPQGVCGKHNYMSPEVFANTDSFDGFAIDLWAAGVILYIMLTGFPPYDQASRTDQRF-ELIATGRLMEQLRNWNIQ-LSEEAGNLLQRMLTLDPRERPTLAEILADPW 413          
BLAST of mRNA_E-siliculosus-1a_F_contig1172.1121.1 vs. uniprot
Match: A0A812Z8L4_9DINO (Hypothetical protein n=1 Tax=Symbiodinium sp. KB8 TaxID=230985 RepID=A0A812Z8L4_9DINO)

HSP 1 Score: 121 bits (304), Expect = 1.940e-25
Identity = 101/335 (30.15%), Postives = 159/335 (47.46%), Query Frame = 1
Query:   13 CRSGLTFMFVRSLKDAIYGQVWDALEVRLHSGGGVIFYTPVLDERGVPRRFAVKRMPKATIARLLPT----MQENPMREAAFLTLVQDPGHPNVVGLAAALEDDTTVYLVTPFVGGVGSGEMFDWVADNYQNPAPEATIMPLLHQIVDGTRYVHSKGICHADMSLENTLVNSAHTEAFIIDFGMALQMPTDEAGQRFMSVPDRRKAKRSYCPPETY-KGRQYDGVKVDVFSVGCMGFMMFTGIPPFDYASRLDRKFRKVVYEGDLQGYLAEYGMPPLPD-PVFQLLRRMMSYQPENRPLPVEVLENPWFAPLGYAQQPQAAAPAMNA*QSVAARL 999
            C +G ++  V++L+D + G+V  A +V L    GV+        R   +  A+K + K+ I          +QE+PM+E A L  +Q  GHP+V+ L   +EDD  V+ V  F GG   G+MF  VA+       EA      +Q++ G  ++HSKG+ H D+SLEN L+ +      IID G+A ++P  +       +P +R  K  Y  PE Y +    DG  VD +  G M F+M  G+PP+        +    + +G L   +  +G           L+ R++  Q   R +  ++L +PW A   Y  Q +AA  A     +V  RL
Sbjct:    9 CGAGTSYELVKTLRDCLMGKV-KAAKVWLPGADGVL--------RDTGKVVAIKILLKSCIQSGTTMDCRPVQEDPMQEMAALRYLQ--GHPHVLELLDLMEDDEHVFEVMEFAGG---GDMFSRVAEAPGGHLSEAEAQRYFYQLITGLHFMHSKGVVHRDLSLENALL-AGDDVLKIIDMGLATELPVPDHSP----IPRQRVGKTGYMSPEVYDRSEVQDGRLVDTWCTGIMLFIMLFGVPPYRVPCARSCRLFGFLQKGRLLDLVKHWGKDGNASVEAKDLVSRLLHPQAAQRLVCEDILAHPWLAT--YHAQHKAAVFADPDYDAVIQRL 322          
BLAST of mRNA_E-siliculosus-1a_F_contig1172.1121.1 vs. uniprot
Match: A0A7S2WT96_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WT96_9STRA)

HSP 1 Score: 117 bits (292), Expect = 3.020e-23
Identity = 102/345 (29.57%), Postives = 162/345 (46.96%), Query Frame = 1
Query:    4 IYGCRSGLTFMFVRSLKDAIYGQVWDALEVRLHSGGGVIFYTPVLDERGV--PRRF-------AVKRMPKATIARLLPT---MQENPMREAAFLTLVQDP----------GHP-NVVGLAAALEDDTTVYLVTPFVGGVGSGEMFDWVADNYQ---NPAPEATIMPLLHQIVDGTRYVHSKGICHADMSLENTLVNSAHT-EAFIIDFGMALQMPTDEAGQRFMSVPDR----RKAKRSYCPPETYK-GRQYDGVKVDVFSVGCMGFMMFTGIPPFDYASR---LDRKFRKVVYEGDLQGYLAEYGMPPLPDPVFQLLRRMMSYQPENRPLPVEVLENPWFAPLG 933
            ++   +G T+ F+R LK  IYG V      RL     V+   P   E+ +   RRF       AVK + K  +  ++     M ENP++E   +  + D           G P  V+ +   +EDD  +Y++ P +      E+F  V D  +      PE+ +     Q++DG   +HS G+ H DMSLEN +++  HT    IID GMA+++P  E        PD     R  K  Y  PE  +  R +D  K+D++++G M F++ TG+PP+D  +     DR+F+ V+  G L   L  + +   P     L++R++   P  RP   E+  +PWF   G
Sbjct:  258 VHSTGTGRTYGFIRKLKKCIYGSV------RL---AAVLEPLPDSPEQHLMASRRFTMSEERVAVKCIEKQRVDYMMQQGRRMNENPLKEIGTMQYLTDRMQGLVPADIRGDPARVLPMIECIEDDQFLYMIMPCL----PEELFHRVEDRSEAGLGAFPESEVFQYFSQLLDGLEALHSVGLVHHDMSLENVMLD--HTGRCVIIDMGMAVKVPMPEVAPPVKLAPDAGWPGRCGKNLYLAPEILEPNRSFDPFKLDIWAMGIMMFILITGVPPWDVKTGPFPTDRRFQLVI-TGQLDQLLRAWNIVISPS-AQDLVQRLLLENPAQRPTIEEIRAHPWFVSRG 585          
BLAST of mRNA_E-siliculosus-1a_F_contig1172.1121.1 vs. uniprot
Match: A0A7S2P167_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2P167_9STRA)

HSP 1 Score: 110 bits (276), Expect = 3.780e-22
Identity = 91/316 (28.80%), Postives = 149/316 (47.15%), Query Frame = 1
Query:   43 RSLKDAIYGQVWDALEVRLHSGGGVIFYTPVLDERGVPRR----------FAVKRMPKATIARLLPTMQENPMREAAFLTLVQDP--GHPNVVGLAAALEDDTTVYLVTPFVGGVGSGEMFDWVADNYQNPAPEATIMPLLHQIVDGTRYVHSKGICHADMSLENTLVNSAHTEAFIIDFGMALQMP--TDEAGQ---------RFMSVPDRRKAKRSYCPPETYKGRQ-YDGVKVDVFSVGCMGFMMFTGIPPFDYASRLDRKFRKVVYEGDLQGYLAEYGMPPLPDPVFQLLRRMMSYQPENRPLPVEVLENPW 918
            R LK AIYG V   + ++L          P   +    RR           AVK M    I +L    +E P++E A +  +++     P+V+     + D   +Y   P+  G   GE+F +V  + + P P A       Q+V G  ++   GICH DMSLEN LV+     A +ID GM L++P   D+ G          R +  P  +  K +Y  PE  +  + +DG  VDV++VG + F M  G+PP+D+A++ D +F+ +  +G L   L ++G    P     LL+ ++   P +R    +++++ W
Sbjct:   75 RKLKKAIYGCVRSCMLLKLCQD------MPYQTDPSTGRRNIIWEITGKFVAVKIMDWDLIRKLSGVHKEEPLKEIAAMQSLRNTLDACPHVMPTLDVMTDQQYLYSFMPYCSG---GELFSYVQRDGRFPEPLARFW--FRQLVQGIFHLQKAGICHRDMSLENVLVDG--NNAVVIDLGMCLRIPFSDDDTGGVTDVTAYTLRRLMPPQGQCGKPNYMSPEVLENSEPFDGFGVDVWAVGIILFTMLVGLPPWDWATKEDLRFKMIAIDGQLGEMLRQWGRSVSPLAT-DLLQGILRAHPRDRLTFGQIMDHEW 376          
BLAST of mRNA_E-siliculosus-1a_F_contig1172.1121.1 vs. uniprot
Match: B8BR32_THAPS (Protein kinase domain-containing protein (Fragment) n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8BR32_THAPS)

HSP 1 Score: 104 bits (260), Expect = 3.050e-21
Identity = 77/247 (31.17%), Postives = 127/247 (51.42%), Query Frame = 1
Query:  220 ENPMRE-AAFLTLVQDPGHPNVVGLAAALEDDTTVYLVTPFVGGVGSGEMFDWVADNYQNPAPEATIMPLLHQIVDGTRYVHSKGICHADMSLENTLVNSAHTEAFIIDFGMALQMPTDE-----------AGQ-RFMSVPDRRKAKRSYCPPETYKGRQ-YDGVKVDVFSVGCMGFMMFTGIPPFDYASRLDRKFRKVVYEGDLQGYLAEYGMPPLPDPVFQLLRRMMSYQPENRPLPVEVLENPW 918
            E+P++E AA   +  D   PNV+      +D+  +YL  PF     SGE+F ++  N +    E        Q+++   ++  KGICH D+SLEN LV+  +T+A +ID GM L++P +            AG  R +  P  +  K +Y  PE     + +DG  VD+++ G + F+M  G+PPF++AS  D ++R +V  G L G L +     +      LL++M+   P +R    +V+ +PW
Sbjct:    7 EDPLKEVAAMQFMCSDGAKPNVLPCWDLFKDEKYIYLCMPFCS---SGELFGYIERNGR--FDECVAKFWFRQLLNALYHLQKKGICHRDISLENILVDQ-NTKALVIDMGMCLRVPFNSPTGCESVYDSSAGTLRKLIYPAGQCGKPNYISPEVLLNNEPFDGFAVDLWAAGIVLFIMLIGLPPFEWASNDDPRYR-LVCRGGL-GQLIQQWHRQISPLAADLLQKMLREHPTDRLTLFDVMNHPW 245          
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig1172.1121.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LHX1_ECTSI3.300e-21694.48N/a n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepI... [more]
A0A6H5L877_9PHAE3.580e-20491.10Protein kinase domain-containing protein n=1 Tax=E... [more]
A0A1Z5JDY4_FISSO6.680e-3331.42Protein kinase domain-containing protein n=2 Tax=F... [more]
A0A7S2UUC5_9STRA2.190e-3231.99Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A7S0CIM8_9STRA9.920e-2932.81Hypothetical protein n=1 Tax=Proboscia inermis Tax... [more]
B7G286_PHATC2.630e-2829.50Predicted protein n=3 Tax=Phaeodactylum tricornutu... [more]
A0A812Z8L4_9DINO1.940e-2530.15Hypothetical protein n=1 Tax=Symbiodinium sp. KB8 ... [more]
A0A7S2WT96_9STRA3.020e-2329.57Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A7S2P167_9STRA3.780e-2228.80Hypothetical protein n=1 Tax=Leptocylindrus danicu... [more]
B8BR32_THAPS3.050e-2131.17Protein kinase domain-containing protein (Fragment... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_F_contig1172contigE-siliculosus-1a_F_contig1172:25823..35101 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef902022-09-19
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female2021-02-24
Properties
Property NameValue
Start1
Stop1
Cds size945
Model size3610
Exons8
Hectar predicted targeting categoryother localisation
BRITEko00000,ko00001,ko01000
Best eggNOG OGNA|NA|NA
Best tax levelEukaryota
COG Functional cat.G
EC2.8.1.8
EggNOG OGsKOG0583@1,KOG0583@2759
EggNOG free text desc.protein serine/threonine kinase activity
KEGG Pathwayko00785,ko01100,map00785,map01100
KEGG ReactionR07767,R07768
KEGG koko:K03644
KEGG rclassRC01978
Seed eggNOG ortholog112098.XP_008617645.1
Seed ortholog evalue3.8e-35
Seed ortholog score155.6
Taxonomic scopeEukaryota
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_F_contig1172.1121.1prot_E-siliculosus-1a_F_contig1172.1121.1Ectocarpus siliculosus Ec863f_EcPH12_90f femalepolypeptideE-siliculosus-1a_F_contig1172 28455..35068 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927693.7199047-UTR-E-siliculosus-1a_F_contig1172:25822..284541622927693.7199047-UTR-E-siliculosus-1a_F_contig1172:25822..28454Ectocarpus siliculosus Ec863f_EcPH12_90f femaleUTRE-siliculosus-1a_F_contig1172 25823..28454 -
1696318640.7549648-UTR-E-siliculosus-1a_F_contig1172:25822..284541696318640.7549648-UTR-E-siliculosus-1a_F_contig1172:25822..28454Ectocarpus siliculosus Ec863f_EcPH12_90f femaleUTRE-siliculosus-1a_F_contig1172 25823..28454 -
1622927693.9075835-UTR-E-siliculosus-1a_F_contig1172:35068..351011622927693.9075835-UTR-E-siliculosus-1a_F_contig1172:35068..35101Ectocarpus siliculosus Ec863f_EcPH12_90f femaleUTRE-siliculosus-1a_F_contig1172 35069..35101 -
1696318640.838374-UTR-E-siliculosus-1a_F_contig1172:35068..351011696318640.838374-UTR-E-siliculosus-1a_F_contig1172:35068..35101Ectocarpus siliculosus Ec863f_EcPH12_90f femaleUTRE-siliculosus-1a_F_contig1172 35069..35101 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927693.7363038-CDS-E-siliculosus-1a_F_contig1172:28454..285951622927693.7363038-CDS-E-siliculosus-1a_F_contig1172:28454..28595Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1172 28455..28595 -
1696318640.7688508-CDS-E-siliculosus-1a_F_contig1172:28454..285951696318640.7688508-CDS-E-siliculosus-1a_F_contig1172:28454..28595Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1172 28455..28595 -
1622927693.7566082-CDS-E-siliculosus-1a_F_contig1172:29176..293531622927693.7566082-CDS-E-siliculosus-1a_F_contig1172:29176..29353Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1172 29177..29353 -
1696318640.7788587-CDS-E-siliculosus-1a_F_contig1172:29176..293531696318640.7788587-CDS-E-siliculosus-1a_F_contig1172:29176..29353Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1172 29177..29353 -
1622927693.77642-CDS-E-siliculosus-1a_F_contig1172:30185..302581622927693.77642-CDS-E-siliculosus-1a_F_contig1172:30185..30258Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1172 30186..30258 -
1696318640.78874-CDS-E-siliculosus-1a_F_contig1172:30185..302581696318640.78874-CDS-E-siliculosus-1a_F_contig1172:30185..30258Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1172 30186..30258 -
1622927693.8047135-CDS-E-siliculosus-1a_F_contig1172:31046..311801622927693.8047135-CDS-E-siliculosus-1a_F_contig1172:31046..31180Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1172 31047..31180 -
1696318640.7996242-CDS-E-siliculosus-1a_F_contig1172:31046..311801696318640.7996242-CDS-E-siliculosus-1a_F_contig1172:31046..31180Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1172 31047..31180 -
1622927693.817463-CDS-E-siliculosus-1a_F_contig1172:32089..322321622927693.817463-CDS-E-siliculosus-1a_F_contig1172:32089..32232Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1172 32090..32232 -
1696318640.8076162-CDS-E-siliculosus-1a_F_contig1172:32089..322321696318640.8076162-CDS-E-siliculosus-1a_F_contig1172:32089..32232Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1172 32090..32232 -
1622927693.8344846-CDS-E-siliculosus-1a_F_contig1172:32581..326691622927693.8344846-CDS-E-siliculosus-1a_F_contig1172:32581..32669Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1172 32582..32669 -
1696318640.8155775-CDS-E-siliculosus-1a_F_contig1172:32581..326691696318640.8155775-CDS-E-siliculosus-1a_F_contig1172:32581..32669Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1172 32582..32669 -
1622927693.8533533-CDS-E-siliculosus-1a_F_contig1172:33572..337041622927693.8533533-CDS-E-siliculosus-1a_F_contig1172:33572..33704Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1172 33573..33704 -
1696318640.8230257-CDS-E-siliculosus-1a_F_contig1172:33572..337041696318640.8230257-CDS-E-siliculosus-1a_F_contig1172:33572..33704Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1172 33573..33704 -
1622927693.8888648-CDS-E-siliculosus-1a_F_contig1172:35011..350681622927693.8888648-CDS-E-siliculosus-1a_F_contig1172:35011..35068Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1172 35012..35068 -
1696318640.8307474-CDS-E-siliculosus-1a_F_contig1172:35011..350681696318640.8307474-CDS-E-siliculosus-1a_F_contig1172:35011..35068Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1172 35012..35068 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E-siliculosus-1a_F_contig1172.1121.1

>prot_E-siliculosus-1a_F_contig1172.1121.1 ID=prot_E-siliculosus-1a_F_contig1172.1121.1|Name=mRNA_E-siliculosus-1a_F_contig1172.1121.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=315bp
MFVRSLKDAIYGQVWDALEVRLHSGGGVIFYTPVLDERGVPRRFAVKRMP
KATIARLLPTMQENPMREAAFLTLVQDPGHPNVVGLAAALEDDTTVYLVT
PFVGGVGSGEMFDWVADNYQNPAPEATIMPLLHQIVDGTRYVHSKGICHA
DMSLENTLVNSAHTEAFIIDFGMALQMPTDEAGQRFMSVPDRRKAKRSYC
PPETYKGRQYDGVKVDVFSVGCMGFMMFTGIPPFDYASRLDRKFRKVVYE
GDLQGYLAEYGMPPLPDPVFQLLRRMMSYQPENRPLPVEVLENPWFAPLG
YAQQPQAAAPAMNA*
back to top

mRNA from alignment at E-siliculosus-1a_F_contig1172:25823..35101-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E-siliculosus-1a_F_contig1172.1121.1 ID=mRNA_E-siliculosus-1a_F_contig1172.1121.1|Name=mRNA_E-siliculosus-1a_F_contig1172.1121.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=9279bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1172:25823..35101- (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
GTCATCTATGGGTGCCGCAGCGGGCTGACGTTCATGTTCGTCCGGAGCTT GAAGGATGCCATTTACGGACAAGTGTGGGACGCGCTAGAGGTGTGCATGC ATGTGTACGACGTGTGTCTTGTTGTTTAATTTCACGGTACGGTTTGGTCC CATCCGGTACCGGGTGTCCCGTTATGTCGTCGGCGGTTACACCGAGTTTG AAGGAAGCATTTTACAGTTTTACAAACTAGTTGTGGGATGCGTTTTGAGG TGTGTATGCATATCCATATGGACGGTGTTGCGTTGTTGTATGCTTTCACG GTATGTACACGGTTGGTTCCATCCGGGAGCGGACGTCCCGGCTTGTCCTT TCTTTTGGCGGAGGTCTGCGTATTGTTGCGTTTTCTGGGCATGAGGAGTG CCGTTCTTGAAATGTGTGTTCAATGAATTCGTCCCGTCTACCCTGGGCGC CAGTCCTTTTTCGTTGCGGCATGTGTTGCGCGCACCAGTCGGAGGTCAAG ACAGGAGGGAGTTAAACACTGGATATATTTTTGGTTTCTCCGCGTTTCCT CGTGTGCGGTGCTTCTCTTCGATCTTCTACTACTGTTTTCGCCGTAAGGG TCCTCGATTCCCAGCAATCTCTTTCTGGCATTCTTTTGTGGGTACTCCCG ACCATGCGCTTTCGTTCATTTCTAAAGTGTGGATTCACTCCGCAGAGCTT CGAACTCACAGCCTAGAGCCAGAAGGTTTTACGAGGATGTCGACCATAAT ACCACAGATATAGGTGGCACATTGTATGTATCACACCCCCTGGCCCAGTT TTCACAGCTCGATTGCTCCACGAACAAGGATGTATGTATCAAACGATAGG TTTTCGGCAAAATCCTGACGACACGGTTCCGCCGCAGTTGTGTTCGGCTC CGCCGCTCTTTCTGCTGTGGAAAGTCGGTCCAGGGGGTGTGATATCTCAC GTCACGTCTCCTACTGTGAACCACCCAGCCACGGGGTGTGTGACTAGTGA CTAAACGCAATGCCACTCAGCAAACACGCGTGACGTCCACAAACACTTAC GGGCTCGGAGAGCGCAAGAAAAAAACACGTTACTTCACGGAAGACTACCG GTTCGAAGAGAATCCCCCCCAGGCGGGATGGCGGTGTTGAACTCTTACCC GCGTGAGAGTTTCGTGTAGCAACATCTGGGTGGATTGCTGTTTTGTTCAG TTTACCTCGTGGATACTGGAATACCGTTTGTAGTAGCTGCTGCTGCTGTT TTATATCAACCGACTCGATCTATCTATGATACGGTGGGTATGCATGACTG CTACGGTACACTGCTGCTATTGTTTGTTTATATTCCACTGCGTCTCTCTG TCATACGGTACGCACTACACTGCTGTCGTCCCGCCTTCCTCTGGAAGGTG AGGCTGCACAGCGGGGGCGGCGTAATCTTCTATACTCCGGTGCTCGACGA GAGAGGCGTGCCGCGGCGGTTTGCCGTGAAAAGGATGCCGAAGGCAACTA TTGCCAGGTTGCTGCCGACCATGCAGGAGGTGAGATGGGTCGCGTGTGGT ATGCAGGGAGGCGTTTTTTTTTTTTTTCTGGTATTTGTTGCCTAACGCGG TGGGTCGGTCCACTCGCGTGATTGGCTTGGCTGTGGCGGTGGGTATACCA GCGCGGACCTTTGTGTTTTCCCCGGCCCACGAAAATCAATCGCAGTCGAG AGTCTGTGCACGTTCGTTCGGTGCTTGTCGTATGTTTAGGCTCTCGTTCT TTGGTGGATTGTTCACCGACCCCAAACATAGTGTCAGTGATGGTATGGAT ACAATATCTCTCCCCCAAACCCAAAATTTATAGTATTCTACATGGTATAT GTTTACTCCGGAGTACCATCTGTTATCACAAGAAAGTAAACAGCCACGCA CACCCTCTGCTCTTGTTTTTCATGCATTTGCGGAGAATTCGGGGCTCTGA TTGTGTGTTGGTGTGGTCGCTCATGGGGTAAACGTGAAGTACATGTATCA CGTTGGTTGGAGAATGAGAGGACTATGTGCAACGGTCGGTTCTCTGAATT ACATTTGGCAATGTTAGAAGATTCACGTCCGGCGACGAGCGTTGGGCACA GATTGAACTTTTGTTGTTGTCGTCGAAAGCCGCGATTGTAGTTCAGGTTT CTTGCTTGTTGTTATCTCCTTCGCACGCCGTGATTTTGGTCGTAACCAGC TACGGGTACGCTTACAAGTAGGCACACCCCGCCCCCTCGTGTACTAGCAT TTTCTTTGTTTGTTTTTCATACTGAAGCTAAAACAAATCCATATTTTTTC ATTGCGTTTTCCCGCAGCAATAACATCCTTCTAACATTTCGTTACGGTAT CTGGTGAGCACGCCTGAAAAAGCTCTAACATTGGTCCCACCCTGTTTTCT GTTCTGCTTGGGATGCCGTTTTTCGAGGATAGAACCCGATGAGAGAAGCG GCATTTTTGACCTTGGTGCAAGATCCAGGACACCCCAACGTTGTCGGCCT GGCGGCGGCTCTAGAAGACGGTAGGTTCCTGTTGGCTCTCGCTGGCGGTT TGCTATATATATATATTTTTTTTTCTTCTTAATGTGACCCAATGAATCCG TATCGATCTATCGATCTATAGAAAAGGGTCTCAGCTAACTTAGTTTTTTC GCATGTGTGTGCTGGGGGGTACATGTGCCACGCAATTCCGCCTTGTCTCC CAACACCCCCGGCTTTTTTTTTGCTACATAAGAGGTGTAGGAACCACACC GTTTTTTTTATTACCAACCTCACCCCCCCCCATATTATTTTGGTGTGGTA GAGGGAGTTTCAACACCGTTTTCTTACCACTCTCGCCCACCCCCCCGTTT TTTTTCCGAACCAACACAGATACTACGGTGTACTTGGTGACGCCTTTCGT TGGCGGAGTGGGGAGCGGAGAGATGTTCGACTGGGTCGCGGATAACTACC AGAATCCGGCGCCGGAGGCAACTATCATGCCGCTTTTGCACCAAATCGTC GATGGCACGAGGGTGAGGAGTGCCGCCGAGGCGATCGATTCTCTCCGTCG AGTCGCGTTTTTCTTGATGCTGCTTGGCCACTCTGTATGGGTATTTGCGT CCCCAAAACTGAAAATTAAAAAATCCCGAAACAAACCACGAAAAAAAACA AAGCACGTAACGCCATCACGTGATCATTTTTTTATGTTCATGTTTGATGT TCACGTTTGGATACGAATGGCCCTATTTTTTTCAAGCTGAGTTGTATGCG GACAGCTTGTGAGTGACTTCGTAGTCATGCCGCAGTGTGTGTGGGGGGGG GGGAGGAGGGGGGTCGTCCAACGGCGCCGCCCGATGTGGCGGGGTGCAGT TCTTTTTCTTGTCTGCGGTCCCCCTCCAGTGCACCTTGTGGTGTCGCACG CAAGATGTTCGGTGCTCTCTGAGCTCGTGGTTCGATAGTACACGCGTTGG AGACTTTGCCCTCCGGAACTGCTGCCCAACGCACTAATTCCACAGATGTC CCGTGACTGGGACTTCGGCAAAACACGTTGTGGTTAAAATACGGTGCGCT ATTTTGCTCGTGTATTGCCGCCAGCACCTCACACAACGGCGTTTTTCCTT CGGGCAAGTAGAGATGACGTAACCCGCCGTGGCGCGGATGAAACCGTCAC TATTTTTTCGTTCATTCAAACCATCGTTTTCAGACGCAAAATACGAGCAC GTCTTGCCAACGCCAAGCTGCATATGTAATATATATATATGCATGTAGTA TACCTCCTGAGTTTTCTGTCCCCACCCGCGGGTATATAAAAGCATTATTG AGAATACTCCTTGTTCGATGTTCGACTTACTCCTCGTTCGATGTTCGGCT TGTGAAACGCGTGCATGCATGTACGCCTGCGGGTGGCAAACCCCGGTCCC GACGACAAAAAAAAAAAAAAGTACGTGCACTCGAAGGGGATCTGCCACGC GGACATGTCGCTCGAGAACACCTTGGTCAACTCGGCGCACACCGAGGCTT TCATCATCGACTTCGGCATGGCCCTCCAGATGCCGACCGACGAGGCTGGA CAACGGTGAGAGAGAGGGCGGTGGGCTGTTACAGGACGCCCCCCCCCCCC CCCCCCCCCCCACCCCCACAACACAAAAAAACAAAAAAAAAAAAAAACCA AGAACCAAGAAACTATTTTTTTTTTTTCNNNNNNNNNNCCCCCCCCAAAT CGCGCCCGCGTACGGTTGAAAAGGGGGAGGGGGAGGGGGGGGGGGTGTTC AGGGCCCCCCCCCCCCCCCCCCCCGCAATTTCAGAAAAGAAAAAAAAAGT CGTTACAAATATACTGAAGAGGCTAATTCTTTTTTTTCACGATTAGGACC ATAAGCTTGAGAAGCACGGCCCAGCCGTGGATCCTGCACTAAACTGTTAC CACTGTCGGTACCCATATGTCAAACTCTTACCGCTACTGGTGCTCATATG TCGACAACGATGGAAGCGTAAAAGAAATTGTTGTGGTTTTATCTGGAAGG AGTGGTCTTCTTTGATTGTATGTATATTGTCTAAGAAATTGAGCCCCGAC TTGAATTCGACGTTTCTTATGCGAATTTTCTACAATGAATAAATAAGTGT GTGGGTGTTCATGTGTAGACGTTTTGTTTGTTTTGTTCGGAGTATTCCGT TCACGACCTGGCCAGTTTTTTTTTTTGTTCCCAAGGTTGCTGCACCACTA CCGTGCTCTCTGTGCCTGTGCATGAGTGTTTTCCATTTCCCATGGACTGC TGCGCTACAAAACCGAACACCGGAGGAATACCCGACCGACCAATGCGTGT TTGTAAAGTCTTCTCATCGTTGCTGCCCCCAACCTTTCAATAGGTTCATG TCCGTGCCGGATCGCCGAAAAGCCAAGAGGTCCTACTGCCCGCCCGAGAC CTACAAAGGCCGACAGGTGAGAAAGTTGTCTTGCTGCCCTTCTCCCCCCA CCCCCTCTCCCATGGAACAACGGCGAGAATATGGTAGCTGTGCTGGGGCA TAGGGTGGGGGGTGAAGAGGCGGGGGAAGTAGCATCGATGGGATAGGTAG AATACGGGAAGCGCGTTTGGGCCACCTTTGGCAAAGTAGGAAGGCCATCG GTGATCGGTCCTGTGGGAACAATGCTCCGTCCTCTCCCGAGGACGCGTGG TGTATGGCCTAACAGCTGAGGCATGCGACACACGAGTACCCCTCCGATCC CTCGCTCGCCTCCACTGGGGAAAGTCGCACCGAGCATGGTAAAAGGTACA CCTGCAGGACTTGGACGGATCTATCTATCGCCATCATTTTCCCCTCGACG GTCAGGACGTACGTAGCGTATTAGGCTCTGGAGGCGGAAACGATTTTCGA GCGGCGGCAGATTCAAAGCCCTTGCCCGTGATGGCTATATGTTGAGATGC CACTTGGCGTGGTTACCGTTGAGTGTTTTGACAATGTGTTCCGGGTTGGC TCCTTCGCTGTAGAAAACAGACTCCAACAAGTCAAGTGTGCGGCAACCCG TTCTTCATTTGTTGGGGGGCGCGCGCAGGCAAATTCGGGGGAGGCGGGAT CCGTTTTTATTTGCTTCCGGTAACTCTGCCTGCCAGAGTAGGTTTTTTTA TCATCCCTCTGAATCCTATGGTTGATTCCTACCGACGCTGTTGTTCGTTT GCTGCCTTATTTCCCCCCGTGCCGCCCCCTCCGTCATCACGGAACTACGG TAAAAACCGTTACCATACCTTGCGATCCACGAACATGAACATGGCCAGTA CGACGGTGTCAAGGTGGATGTGTTCTCCGTGGGCTGCATGGGGTTCATGA TGTTCACCGGCATCCCTCCCTTCGACTACGCCTCGCGACTCGACAGAAAG TTTCGGAAAGTGGTGTATGAGGGGGACCTGCAGGGCTACCTTGCAGAGTA TGGGATGCCCCCCCTACCAGACCCGGTAAGAGGTAGCAAAAAGTTTGCAA ACAACCATGGTTAATAGTATGTGGATGTGCGAAATCGTAACCCTAGCCAT AGGTTACTTCTCTATTTAGTGTACTGGATAACAGGGGGTGCCAATAAGTA CTGAAAAATGCGTGGCTGTACGATGTGTATCTCCCCGAAAACGGAAAAAA AAAGTTGAATGAAGAAGAAATAAACGAAGTTTATGGACACGTCCACACAC GCACATGTAAGTGTTTTTTTTTTTTTTCGTTTTCCGTGTCAAACGCCACC CATATCGAAGAAAATAGTAATATTCTGCTGTGGGCAAGAAGACTTGCTTG GAAAATCGATTGATGGTGGCGGCTGTAACCGGTCGTGATAAATCGAAACG GTCGGTTCCCCGGAACCTTCCCTGTCAGTGTAAAGCTGCTTGCGGGGGTG TACAAGTTCCTGGGGGAAGGAGCGCCATTCTGCACTTGTAGCACCGCACC GAACATGGCCGTCGCTTTGGTGCTTTGGTTACTCCCTCTGCCAAACGAGT TCATACATTATACCGGCCAACTTACTTGCTTGTTGTGACGCGGTCGCTAA CGCCAGGTGTTTCAACTACTGCGGAGGATGATGTCCTACCAGCCGGAGAA CAGGCCGTTGCCCGTGGAGGTCCTGGAGAACCCCTGGTTTGCTCCCTTGG GGTACGCACAGCAACCCCAGGCGGCGGCGCCAGCCATGAACGCATGACAA TCAGTCGCGGCAAGGCTTTGGAGGAGGTGGTTCCGAGGCCGGGACAGCGG GGGCAGGGGACCGTAGGCCGCCACCGCGGCGACACAGCAGTATTCGGTGC AGGCTATTGGCCGAAGCGGGTTTTGGCGGCGTGTTAAGAAGTGTGATTTG GAACGCCAATCCCTCGCCGATTATGTGTAGAGAGTTGGGCGCGGTGTTGC TCGTTGTTCGGAATGACCGACTTGCGCGCTGAATTGGCGTGCCTGGTGAG CGCGTGTTTGTGAAGGTTGCCGGTGGATGTTGAGGCACCGCTGGCTGGCT GTGGGTTCGCCCTTGCACGAGCGATCCTAGCCCCAGGCGTGCATGCCTTC AGTGGCGGCACGGCGGTTCTGTTTTTTTCGTTGACTAATGTTAACATTCA TCATATTGTTGTCGACTATTTGCCGAGAAAGAAAAAAAACACGCGGCGTG GCGACGACGCGACGTGCGTAAGAGGACACCCGCCTGACCCTTTCCTATAG CTGAGTGGCGATATAAGTCGCGGCCCACACGACGGGCCTTTCATCCCATG TAAGGACACAAGGCACCGCTTGGCGTGCGGAGTAGAGAATATTCCGGGTA TCCGTTTGCGCGAACCATGGACTCTTGAGAGTAAAGGAGTCCCTAGGGTA ACCCACGCAAAGCGGGTCCCGGAATTTGGGCGCCCAGAACGGGGCGGTTC GCTACGGGATTTCCAGATCACGCTTGCGATATTTCTTTTCTTTGTATTGT GTTTTTATTTTTTTCGTTGCTGTAGTTGCGATGTCCACGAGTGTGGATGT CGAGATCTCGAGCTCCTTGTCCAGGAGGGAGCCCCTGTTGTGCTCCTCAG GCATCACCCGGTGTGTGTGTGCCGCGCGTGCGGAGTTGCAGGCTGACACC GATGTACCACGTGTGCACATGTGCGGCAACATTAGAGGTGCAGTGCGTAG GCAAGCCCCACTTGATGAACGCCGGTTAGAACGCGGTGAGTCAGTTTAAT TCTGATCTTGGTGGTGGTGGTGCTTGATTCAGTGATTCGCTGTCAGCGTG TGGGGGCTCCTCTCTAAGTGGCGTGTGGTGTGCGCATGTGGGATACGGGT CACGTCGCCGACTCACGGCTATCAGCAGGGGCCCTGTGCAAGTCGTCGTC GTTTTTCATTTCTGGGGGGGCGCTGGATGGTACTGTAAATCGGAGAGGGG GGGGTGGGCGGTTCTTGGAGGTGATTCTTGGCGCCTGGGAGTCTCGACAC GACGCTTGTTCGCTTGTAGTCGGCGCATGGGTGCGGCAAACATTAGGTAG GGCCACGGGTTTGCGCGTGATCCATACGAGTCGATCGGTTGGTTGTCATC CCGCTCTGTCCTTGCTGTGCATGAGGGAAAGGCTTTGAAGGAGCCGGAAT TGCGCGTGCAACTTGCTGCTTTCATGGCATGTATCATAAATATAAAGGGC GGAGCCTCGCTAGCGTGCAAGCTCGCTGGTGGGCAGTGGCGCGGGTTACA GTCGTTTCATCCTACGTGGTGGATGTGTGGGTTTACGGTTTATATTCTGA AGGCCTTCCCTTTTCCGTCCCGCCGTTCACGGTACGATTTTTTGTGTTAC ATCAACTTTTTCGTCTATTATAGTGATCTTTTCGTTTGGCGGTGTCGGTG ATTTTTCCGCTCCAGAACTCGGTCGGTCAAAGCTAGATATAACGCGACTG GCTGGTGTGGAAAGTGCTACGGCAACAGCACCGCCTCACGACCCTGTGCG ATTCGTTGTAGACCGATTGGATTACTTTCCTCTGTCGCTATTGACCAACC TCGAGTGTCGATGTAAACTCGTTGCTGGGGGTCTGTGCACTGCATGAATC TTGACAGGCTACAAAGGTTTTTTATTACCCTCTTTTTGTGGTTCGGGTAC AGTGCGTGAAATTGCTCTTTTGGGGGAGGAGGTTCGCCTCCGACATTGTC AGTTAAAGGTTTCGCCGTACGTCGGCTGAGGTATTGGGGGCCTTGGGGAA GGAGATTAGCCTCCGACGTCCTCCGTTAAGGTTTCGCCATCATTCATCAT CGGCTTAGATACTGGGGATTCTTTAAGCTGGTATGCATATGCATATGCAA ATGGCGGTGTAGGGTGACGTGGGGTGCCGATTGTCGATGTGAGTGGGGCA TGAGACGTATCTGCTGTAGGTACAGAGGCAGTATTTTTTGCAGTTAGCGG CCCGCACTTGAGAAACTCTTATATTGGTCCGAGACTCGTTTCTTGTTTTC TCTATGGGGTACGGTTATATATATATAAGTAGGTTTTAGTGTTGGCTTCT TCACGGAGCACCTGTTCTTCTGGCCATGGTCTTGACTGATCTTTTTCTCT TTTGTTGAGCCTGAAGTCCTTAACTCCCAGGTGCTTAAGGCATGGATTGG GTGGTTCGCTATCCTGGAATGCATTTCTGGGTCTTCGCCTGTGTATCCCC CAAAAATATGTGTACCTTGCTTTCACGCCCGCAGAAGATCAGGGAAAAGC GAGAGGCGCCGTCAATCAGTAACACAGCAGCAGTAGTGAATGGCTTCGTA GCAACACGCGCAGAGTCTCGCGCGGTGTTTTTATTGTATTGTAATCGACG AAATAATTTGGATGAACCCCCGACTTGGC
back to top

Coding sequence (CDS) from alignment at E-siliculosus-1a_F_contig1172:25823..35101-

>mRNA_E-siliculosus-1a_F_contig1172.1121.1 ID=mRNA_E-siliculosus-1a_F_contig1172.1121.1|Name=mRNA_E-siliculosus-1a_F_contig1172.1121.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=1890bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1172:25823..35101- (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
ATGTTCGTCCGGAGCTTGAAGGATGCCATTTACGGACAAGTGTGGGACGC
GCTAGAGATGTTCGTCCGGAGCTTGAAGGATGCCATTTACGGACAAGTGT
GGGACGCGCTAGAGGTGAGGCTGCACAGCGGGGGCGGCGTAATCTTCTAT
ACTCCGGTGCTCGACGAGAGAGGCGTGCCGCGGCGGTTTGCCGTGAAAAG
GATGCCGAAGGCAACTATTGCCAGGTTGCTGCCGACCATGCAGGAGGTGA
GGCTGCACAGCGGGGGCGGCGTAATCTTCTATACTCCGGTGCTCGACGAG
AGAGGCGTGCCGCGGCGGTTTGCCGTGAAAAGGATGCCGAAGGCAACTAT
TGCCAGGTTGCTGCCGACCATGCAGGAGAACCCGATGAGAGAAGCGGCAT
TTTTGACCTTGGTGCAAGATCCAGGACACCCCAACGTTGTCGGCCTGGCG
GCGGCTCTAGAAGACGAACCCGATGAGAGAAGCGGCATTTTTGACCTTGG
TGCAAGATCCAGGACACCCCAACGTTGTCGGCCTGGCGGCGGCTCTAGAA
GACGATACTACGGTGTACTTGGTGACGCCTTTCGTTGGCGGAGTGGGGAG
CGGAGAGATGTTCGACTGGGTCGCGGATAACTACCAGAATCCGGCGCCGG
AGGCAACTATCATGCCGCTTTTGCACCAAATCGTCGATGGCACGAGGATA
CTACGGTGTACTTGGTGACGCCTTTCGTTGGCGGAGTGGGGAGCGGAGAG
ATGTTCGACTGGGTCGCGGATAACTACCAGAATCCGGCGCCGGAGGCAAC
TATCATGCCGCTTTTGCACCAAATCGTCGATGGCACGAGGTACGTGCACT
CGAAGGGGATCTGCCACGCGGACATGTCGCTCGAGAACACCTTGGTCAAC
TCGGCGCACACCGAGGCTTTCATCATCGACTTCGGCATGGCCCTCCAGAT
GCCGACCGACGAGGCTGGACAACGTACGTGCACTCGAAGGGGATCTGCCA
CGCGGACATGTCGCTCGAGAACACCTTGGTCAACTCGGCGCACACCGAGG
CTTTCATCATCGACTTCGGCATGGCCCTCCAGATGCCGACCGACGAGGCT
GGACAACGGTTCATGTCCGTGCCGGATCGCCGAAAAGCCAAGAGGTCCTA
CTGCCCGCCCGAGACCTACAAAGGCCGACAGGTTCATGTCCGTGCCGGAT
CGCCGAAAAGCCAAGAGGTCCTACTGCCCGCCCGAGACCTACAAAGGCCG
ACAGTACGACGGTGTCAAGGTGGATGTGTTCTCCGTGGGCTGCATGGGGT
TCATGATGTTCACCGGCATCCCTCCCTTCGACTACGCCTCGCGACTCGAC
AGAAAGTTTCGGAAAGTGGTGTATGAGGGGGACCTGCAGGGCTACCTTGC
AGAGTATGGGATGCCCCCCCTACCAGACCCGTACGACGGTGTCAAGGTGG
ATGTGTTCTCCGTGGGCTGCATGGGGTTCATGATGTTCACCGGCATCCCT
CCCTTCGACTACGCCTCGCGACTCGACAGAAAGTTTCGGAAAGTGGTGTA
TGAGGGGGACCTGCAGGGCTACCTTGCAGAGTATGGGATGCCCCCCCTAC
CAGACCCGGTGTTTCAACTACTGCGGAGGATGATGTCCTACCAGCCGGAG
AACAGGCCGTTGCCCGTGGAGGTCCTGGAGAACCCCTGGTTTGCTCCCTT
GGGGTACGCACAGCAACCCCAGGCGGCGGCGCCAGCCATGAACGCATGAG
TGTTTCAACTACTGCGGAGGATGATGTCCTACCAGCCGGAGAACAGGCCG
TTGCCCGTGGAGGTCCTGGAGAACCCCTGGTTTGCTCCCTTGGGGTACGC
ACAGCAACCCCAGGCGGCGGCGCCAGCCATGAACGCATGA
back to top