mRNA_E-siliculosus-1a_F_contig117.1102.1 (mRNA) Ectocarpus siliculosus Ec863f_EcPH12_90f female
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Overview
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig117.1102.1 vs. uniprot
Match: D8LPV1_ECTSI (Dus domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LPV1_ECTSI) HSP 1 Score: 840 bits (2171), Expect = 2.660e-303 Identity = 413/421 (98.10%), Postives = 417/421 (99.05%), Query Frame = 3
Query: 6 DAGTCLDPCIALCGTMREIDESHIGAEALEESGRLGYEFYRSIGSPTRIVAPMVDQSELAFRRLCRRYGSNLCYTPMYNSKCFAVSSAYRKSNFDPHPEDRPLIVQFCGNDPALLLASAKFVEKECDAIDLNLGCPQGIARKGRYGAFLLEEWALLRDIVSTLTKNLSIPVTCKVRLLDSVEDTITMCKMLVAAGARIITVHGRTKEQKSKATAGCNWDAIRRIKEALPVPVFSNGAISSLQDVERCLRETGCDGVMSSEAVLERPGLFSDNVSKVTGLKMSQDDIVLEYIDLAKQSPPHSRGRTSVPCLRGHMFKCLFTAVAVRTDLRARLTKARTLEDMEELALAVREARLADPESFDEEKTWYRRHTMPHTSDEWGTPQALWAAQAEVVAKKRLRDPGPEEVGLGDSIFGEEEGAGDY 1268
D GTCLDPCIALCGTMREIDESHIGAEALEESGRLGYEFYRSIGSPTRIVAPMVDQSELAFRRLCRRYGSNLCYTPMYNSKCFAVSSAYRKSNFDPHPEDRPLIVQFCG+DPALLLASAKFVEKECDAIDLNLGCPQGIARKGRYGAFLLEEWALLRDIVSTL KNLSIPVTCKVRLLDSVEDTITMCKMLVAAGARIITVHGRTKEQKSKATAGCNWDAIRRIKEALPVPVFSNGAISSL+DVERCLRETGCDGVMSSE VLERPGLFSDNVS VTGLKMSQDDIVLEYIDLAKQSPPHSRGRTSVPCLRGHMFKCLFTAVAVRTDLRARLTKARTLE+MEELALAVREARLADPESFDEEKTWYRRHTMPHTSDEWGTPQALWAAQAEVVA+KRLRDPGPEEVGLGDSIFGEEEGAGDY
Sbjct: 41 DVGTCLDPCIALCGTMREIDESHIGAEALEESGRLGYEFYRSIGSPTRIVAPMVDQSELAFRRLCRRYGSNLCYTPMYNSKCFAVSSAYRKSNFDPHPEDRPLIVQFCGHDPALLLASAKFVEKECDAIDLNLGCPQGIARKGRYGAFLLEEWALLRDIVSTLAKNLSIPVTCKVRLLDSVEDTITMCKMLVAAGARIITVHGRTKEQKSKATAGCNWDAIRRIKEALPVPVFSNGAISSLEDVERCLRETGCDGVMSSEGVLERPGLFSDNVSTVTGLKMSQDDIVLEYIDLAKQSPPHSRGRTSVPCLRGHMFKCLFTAVAVRTDLRARLTKARTLEEMEELALAVREARLADPESFDEEKTWYRRHTMPHTSDEWGTPQALWAAQAEVVAEKRLRDPGPEEVGLGDSIFGEEEGAGDY 461
BLAST of mRNA_E-siliculosus-1a_F_contig117.1102.1 vs. uniprot
Match: A0A835Z5Z1_9STRA (Putative tRNA-dihydrouridine synthase (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z5Z1_9STRA) HSP 1 Score: 357 bits (917), Expect = 1.480e-115 Identity = 180/324 (55.56%), Postives = 229/324 (70.68%), Query Frame = 3
Query: 81 AEALEESGRLGYEFYRSIGSPTRIVAPMVDQSELAFRRLCRRYGSNLCYTPMYNSKCFAVSSAYRKSNFDPH-PEDRPLIVQFCGNDPALLLASAKFVEKECDAIDLNLGCPQGIARKGRYGAFLLEEWALLRDIVSTLTKNLSIPVTCKVRLL-DSVEDTITMCKMLVAAGARIITVHGRTKEQKSKATAGCNWDAIRRIKEALPVPVFSNGAISSLQDVERCLRETGCDGVMSSEAVLERPGLFSDNVSKVTGLKMSQDDIVLEYIDLAKQSPPHSRGRTSVPCLRGHMFKCLFTAVAVRTDLRARLTKARTLEDMEELALA 1046
AEA+ +SG G+ YR +GSP +IVAPMVDQSELAFR L R+YG+ LCYTPM NSK YR +N D PEDRPLIVQFCGNDP ++ A+A+ V++ CDA+D+NLGCPQ IAR+GRYGAFLLEEW LL+D+V + + +PVTCKVRLL +SVEDTI +CK+LV AGA ++TVHGRT+ Q CNWDAIRRI+EA+PVPVF+NG I ++D E CLR TG GVM SE VL P F+ N G+ + + + EY+ LA++ PP R LRGH+FK LFTA++ DLR L + +LED+E ++ A
Sbjct: 1 AEAMRQSGERGWALYRKMGSPRKIVAPMVDQSELAFRMLARKYGAELCYTPMINSKILLEDHTYRSTNLDLECPEDRPLIVQFCGNDPGVMAAAAQLVDRRCDAVDINLGCPQNIARRGRYGAFLLEEWDLLQDMVWAMHCSAKVPVTCKVRLLQESVEDTIELCKLLVGAGAAMLTVHGRTRMQVGCLAGVCNWDAIRRIREAVPVPVFANGGIGCIEDFEECLRVTGAAGVMVSEVVLSNPAFFAPNAPGPCGVAPTSESMCREYLALARRFPPK---RYVSGILRGHVFKLLFTALSRCEDLRPVLAVSHSLEDVERVSRA 321
BLAST of mRNA_E-siliculosus-1a_F_contig117.1102.1 vs. uniprot
Match: A0A6G0WW03_9STRA (tRNA-dihydrouridine synthase n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WW03_9STRA) HSP 1 Score: 345 bits (885), Expect = 5.420e-110 Identity = 167/334 (50.00%), Postives = 229/334 (68.56%), Query Frame = 3
Query: 111 GYEFYRSIGSPTRIVAPMVDQSELAFRRLCRRYGSNLCYTPMYNSKCFAVSSAYRKSNFDPHPEDRPLIVQFCGNDPALLLASAKFVEKECDAIDLNLGCPQGIARKGRYGAFLLEEWALLRDIVSTLTKNLSIPVTCKVRLLDSVEDTITMCKMLVAAGARIITVHGRTKEQKSKATAGCNWDAIRRIKEALPVPVFSNGAISSLQDVERCLRETGCDGVMSSEAVLERPGLFSDNVSKVTGLKMSQDDIVLEYIDLAKQSPPHSRGRTSVPCLRGHMFKCLFTAVAVRTDLRARLTKARTLEDMEELALAVREARLADPESFDEEKTWYRRH 1112
G++ Y + P RIVAPMVDQSELAFR L R+YG++LCYTPM++++ F + YR + + P DRPL VQFCGN+P ++L +A++VE ECDA+DLNLGCPQGIA+KGRYGAFL+ E ++R IV L+ NLS+PV+CK+RLL EDT+ C ML+ AG + VHGRTKE C+W I R+K+ LP+PVF+NG I + DV RC+ ET +GVMSSEA+LERP LF+ + K G ++ Q D+ +EY++LAKQ PP + LR H+FK LF + V TDLR + A+T +++ + + ++ + A P F E +WYRRH
Sbjct: 19 GWKLYNDLHQPKRIVAPMVDQSELAFRMLARKYGADLCYTPMFHARMFQEDATYRATAWQVEPSDRPLFVQFCGNNPDVVLNAARYVENECDAVDLNLGCPQGIAKKGRYGAFLMHEPEVVRSIVEKLSANLSVPVSCKIRLLPKYEDTLAFCNMLIDAGCCWLVVHGRTKEMNKHLVRECDWATIARLKKELPIPVFANGGIETDDDVVRCMEETNVEGVMSSEAILERPALFAGDKDK-DGQRIRQIDLAMEYMELAKQFPPPEK------FLRAHLFKILFQDLKVHTDLREQTGLAQTHDELLAICVELKSRQEAAPVPFTTEDSWYRRH 345
BLAST of mRNA_E-siliculosus-1a_F_contig117.1102.1 vs. uniprot
Match: A0A2D4BU30_PYTIN (Dus domain-containing protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BU30_PYTIN) HSP 1 Score: 343 bits (881), Expect = 4.130e-109 Identity = 175/357 (49.02%), Postives = 238/357 (66.67%), Query Frame = 3
Query: 54 REIDESHIGAEALEESGRLGYEFYRSIGSPTRIVAPMVDQSELAFRRLCRRYGSNLCYTPMYNSKCFAVSSAYRKSNFDPHPEDRPLIVQFCGNDPALLLASAKFVEKECDAIDLNLGCPQGIARKGRYGAFLLEEWALLRDIVSTLTKNLSIPVTCKVRLLDSVEDTITMCKMLVAAGARIITVHGRTKEQKSKATAGCNWDAIRRIKEALPVPVFSNGAISSLQDVERCLRETGCDGVMSSEAVLERPGLFSDNVSKVTGLKMSQDDIVLEYIDLAKQSPPHSRGRTSVPCLRGHMFKCLFTAVAVRTDLRARLTKARTLEDMEELALAVREARLAD----PESFDEEKTWYRRH 1112
R DE ++ ++ S G++F+R+IGSP R+VAPMVDQSELAFR L R +G+ LCYTPM++S+ F+ S+ YR F+ H DRPL+VQFCGNDP +LA+A+ VE CDA+DLNLGCPQGIARKGRYG+FL++E ++R IVSTL++NLSIPVT K+R+ ++T+ C ML +AG ++ VHGRTKE A +WD IR IK+ L +PV +NG I +DV+RCL TGCDGVMSSEA+LE P LF + S ++ +Y+D A++ PP S ++ H+FK LF + V TDLR L K+ +DM + +A +ARL+ P + E +WYRRH
Sbjct: 24 RSRDEFPRESKRVKMSKLRGFDFFRAIGSPKRVVAPMVDQSELAFRMLTRHHGAELCYTPMFHSRLFSESAEYRAKMFEKHMNDRPLVVQFCGNDPQTVLAAARHVEAHCDAVDLNLGCPQGIARKGRYGSFLMKEKDVVRSIVSTLSENLSIPVTVKIRVFPDRQETLEFCDMLQSAGCDLLVVHGRTKEMNKTAVREVDWDIIREIKQRLTIPVLANGGIEVPEDVDRCLEATGCDGVMSSEAILENPALFGSE-------RPSFMEMAKQYLDFAREYPPASE-----KIIKAHLFKILFQDLRVHTDLRTELAKSPNRDDMARI-VAELDARLSSDAFPPVVYSAETSWYRRH 367
BLAST of mRNA_E-siliculosus-1a_F_contig117.1102.1 vs. uniprot
Match: A0A8K1CA77_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CA77_PYTOL) HSP 1 Score: 342 bits (877), Expect = 9.400e-109 Identity = 180/356 (50.56%), Postives = 240/356 (67.42%), Query Frame = 3
Query: 51 MREIDESHIGAEALEESGRLGYEFYRSIGSPTRIVAPMVDQSELAFRRLCRRYGSNLCYTPMYNSKCFAVSSAYRKSNFDPHPEDRPLIVQFCGNDPALLLASAKFVEKECDAIDLNLGCPQGIARKGRYGAFLLEEWALLRDIVSTLTKNLSIPVTCKVRLLDSVEDTITMCKMLVAAGARIITVHGRTKEQKSKATAGCNWDAIRRIKEALPVPVFSNGAISSLQDVERCLRETGCDGVMSSEAVLERPGLFS-DNVSKVTGLKMSQDDIVLEYIDLAKQSPPHSRGRTSVPCLRGHMFKCLFTAVAVRTDLRARLTKARTLEDMEELALAVREARLAD-PESFDEEKTWYRRH 1112
M E D+ + + + GYEF+R+IGSP R+VAPMVDQSELAFR L RR+G+ LCYTPM++S+ FA S+ YR F+ H +DRPLIVQFCGNDP +LA+A+ VE CDA+DLNLGCPQGIARKGRYG+FL++E +RDIV+TL++NLSIPVT K+R+ ++T+ M+ AAGA ++ VHGRTKE A +WD IR IKE L +PV +NG I +DVERCL+ T DGVMSSEA+LE P LFS D + + ++M++ +Y+D + PP S +R H+FK +F + V TDLR L KA + M ++ + E RLA+ P + E +WYRRH
Sbjct: 6 MAESDDETRQEKRMRMTRLRGYEFFRAIGSPQRVVAPMVDQSELAFRMLTRRHGAELCYTPMFHSRLFAESAEYRAKMFEKHIKDRPLIVQFCGNDPQTVLAAARHVEGHCDAVDLNLGCPQGIARKGRYGSFLMKEKDTVRDIVTTLSQNLSIPVTVKIRIFPDRQETLEFADMIQAAGADLLCVHGRTKEMNKTAVKEADWDIIREIKERLSIPVIANGGIELPEDVERCLQVTKADGVMSSEAILENPALFSTDKEASYSFVEMAK-----QYLDATLEYPP-----ASDKIIRAHLFKIIFQDLCVHTDLRTDLAKAPNRDAMVKIVEEL-EKRLAEKPGEYKVETSWYRRH 350
BLAST of mRNA_E-siliculosus-1a_F_contig117.1102.1 vs. uniprot
Match: A0A024TEX3_9STRA (Dus domain-containing protein n=2 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024TEX3_9STRA) HSP 1 Score: 341 bits (875), Expect = 4.350e-108 Identity = 172/336 (51.19%), Postives = 231/336 (68.75%), Query Frame = 3
Query: 111 GYEFYRSIGSPTRIVAPMVDQSELAFRRLCRRYGSNLCYTPMYNSKCFAVSSAYRKSNFDPHPEDRPLIVQFCGNDPALLLASAKFVEKECDAIDLNLGCPQGIARKGRYGAFLLEEWALLRDIVSTLTKNLSIPVTCKVRLLDSVEDTITMCKMLVAAGARIITVHGRTKEQKSKATAGCNWDAIRRIKEALPVPVFSNGAISSLQDVERCLRETGCDGVMSSEAVLERPGLFSDNVSKVTGLKMSQDDIVLEYIDLAKQSPPHSRGRTSVPCLRGHMFKCLFTAVAVRTDLRARLTKARTLEDMEELALAVREARL--ADPESFDEEKTWYRRH 1112
G++ Y + P RIVAPMVDQSELAFR L R+YG++LCYTPM++++ F + YR++ + P DRPL VQFCGN+P +L +A++VE CDAIDLNLGCPQGIA+KGRYGAFL+ E ++R IVS L+ NLS+PVTCK+RLL EDT+ C ML+ AG + VHGRTKE C+WD+I R+K+ALP+PVF+NG I + DV RC+ ETG +GVMSSE +LERP LF+++ K G+ + Q D+ +EY+ LAK PP + LR H+FK LF + V TDLR ++ A+T + + + ++ ARL A P E +WYRRH
Sbjct: 47 GWKLYNDLNQPKRIVAPMVDQSELAFRMLTRKYGADLCYTPMFHARMFQEDATYRETAWQVEPTDRPLFVQFCGNNPDTVLHAARYVESHCDAIDLNLGCPQGIAKKGRYGAFLMHEPDVVRSIVSKLSSNLSVPVTCKIRLLPKYEDTLAFCNMLIDAGCCWLVVHGRTKEMNKHLVRECDWDSIARLKKALPIPVFANGGIETDDDVVRCMLETGVNGVMSSEGILERPALFANDRDK-HGVPIRQIDVAIEYLQLAKTFPPPEK------FLRAHLFKILFQELKVHTDLREQIGLAQTHDVLWAITKELK-ARLDAAAPVPTSVEGSWYRRH 374
BLAST of mRNA_E-siliculosus-1a_F_contig117.1102.1 vs. uniprot
Match: A0A1V9Z9A1_9STRA (tRNA-dihydrouridine synthase n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9Z9A1_9STRA) HSP 1 Score: 337 bits (865), Expect = 4.200e-107 Identity = 168/346 (48.55%), Postives = 230/346 (66.47%), Query Frame = 3
Query: 87 ALEESGRLGYEFYRSIGSPTRIVAPMVDQSELAFRRLCRRYGSNLCYTPMYNSKCFAVSSAYRKSNFDPHPEDRPLIVQFCGNDPALLLASAKFVEKECDAIDLNLGCPQGIARKGRYGAFLLEEWALLRDIVSTLTKNLSIPVTCKVRLLDSVEDTITMCKMLVAAGARIITVHGRTKEQKSKATAGCNWDAIRRIKEALPVPVFSNGAISSLQDVERCLRETGCDGVMSSEAVLERPGLFSDNVSKVTGLKMSQDDIVLEYIDLAKQSPPHSRGRTSVPCLRGHMFKCLFTAVAVRTDLRARLTKARTLEDMEELALAVREARLADPE----SFDEEKTWYRRH 1112
A E + G++ Y +G P I+APMVDQSELA+R L R+YG +LCYTPM +++ F S+YR S + EDRPL VQFCGNDP +LASAK V+ CDA+DLNLGCPQGIARKGRYGAFL+ E ++R+IVSTL+ NL +PV+CK+RLL EDT+ C MLV AG + +HGRTKE + C+W++IRR+++ LP+PVF+NG I ++ DV+ CL T +GVMSSE +LE P LF+ N VT + Q D+ LEY+D A + PP + +R H+FK LF + TDLR + A++ +++ ++ L + RL P+ + E +WYRRH
Sbjct: 3 ARERAAMRGWKLYNELGKPKTILAPMVDQSELAYRMLVRKYGVDLCYTPMIHARMFRDDSSYRASAWQVVKEDRPLFVQFCGNDPQTVLASAKLVQDNCDAVDLNLGCPQGIARKGRYGAFLMHEPDVVREIVSTLSTNLKVPVSCKIRLLPKYEDTLAFCNMLVDAGCCWLVIHGRTKEMNKQLVRECDWESIRRLRKELPIPVFANGGIENVDDVKACLEATEAEGVMSSEGILEWPALFTGNKDPVTQKPLRQVDVALEYLDWAAKYPPPEK------FIRAHLFKLLFQELKAFTDLREAIGVAQSHKELLDITLEAKR-RLESPDYPTIPYSIEDSWYRRH 341
BLAST of mRNA_E-siliculosus-1a_F_contig117.1102.1 vs. uniprot
Match: A0A1V9ZQY0_9STRA (tRNA-dihydrouridine synthase n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9ZQY0_9STRA) HSP 1 Score: 336 bits (862), Expect = 3.130e-106 Identity = 165/344 (47.97%), Postives = 231/344 (67.15%), Query Frame = 3
Query: 93 EESGRLGYEFYRSIGSPTRIVAPMVDQSELAFRRLCRRYGSNLCYTPMYNSKCFAVSSAYRKSNFDPHPEDRPLIVQFCGNDPALLLASAKFVEKECDAIDLNLGCPQGIARKGRYGAFLLEEWALLRDIVSTLTKNLSIPVTCKVRLLDSVEDTITMCKMLVAAGARIITVHGRTKEQKSKATAGCNWDAIRRIKEALPVPVFSNGAISSLQDVERCLRETGCDGVMSSEAVLERPGLFSDNVSKVTGLKMSQDDIVLEYIDLAKQSPPHSRGRTSVPCLRGHMFKCLFTAVAVRTDLRARLTKARTLEDMEELALAVREARLADPES----FDEEKTWYRRH 1112
E + G+E YRS+G P I+APMVDQSELA+R L R+YG +LCYTPM +++ F + YR + + PEDRPL VQFCGNDP +LL SA++V+ CDA+DLNLGCPQGIARKGRYGAFL+ E ++R+IV TL++ L++PV+CK+RL + EDT+ C MLV AG + +HGRTKE + C+WD I+R+++ LP+PVF+NG I + DV CL T +GVMSSE +LE P LF+ N + TG+ +SQ D+ LEY+D A + PP + +R H+FK LF + V TDLR + + +T ++ + ++ RL P++ + +WYRRH
Sbjct: 35 ERAAARGWELYRSLGEPKTILAPMVDQSELAYRMLVRKYGVDLCYTPMIHARMFRDDATYRATAWQVVPEDRPLFVQFCGNDPDILLTSARYVQDNCDAVDLNLGCPQGIARKGRYGAFLMHEPEVVREIVETLSRELTVPVSCKIRLFPNYEDTLAFCNMLVDAGCCWLVIHGRTKEMNKQLVRECDWDTIKRLRKELPIPVFANGGIENDADVVACLAATEAEGVMSSEGILECPALFTGNKNPFTGIPVSQIDLALEYMDWAAKFPPPEK------FIRAHLFKMLFQELKVFTDLREAIGQGQTHAELLAIVHEMK-VRLEAPDAPEIPYSVADSWYRRH 371
BLAST of mRNA_E-siliculosus-1a_F_contig117.1102.1 vs. uniprot
Match: W7TDH4_9STRA (Dihydrouridine synthase n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TDH4_9STRA) HSP 1 Score: 337 bits (863), Expect = 5.250e-106 Identity = 185/398 (46.48%), Postives = 253/398 (63.57%), Query Frame = 3
Query: 90 LEESGRLGYEFYRSIGSPTRIVAPMVDQSELAFRRLCRRYGSNLCYTPMYNSKCFAVSSAYRKSNF---DPHPEDRPLIVQFCGNDPALLLASAKFV---EKECDAIDLNLGCPQGIARKGRYGAFLLEEWALLRDIVSTLTKNLSIPVTCKVRLLDSVEDTITMCKMLVAAGARIITVHGRTKEQKSKATAGCNWDAIRRIKEALPVPVFSNGAISSLQDVERCLRETGCDGVMSSEAVLERPGLFSDNVSKVTGLKMSQDDIVLEYIDLAKQSPPHSRGRTSVPCLRGHMFKCLFTAVAVRTDLRARLTKARTLEDMEELALAVREARLADPESFDE----EKTWYRRHTMPHTSDEWGTPQALWAAQAEVVAKKRLRDPGPEEVGLGDSIFGEEE 1253
LE + +YRS+GSP + APMVDQSELAFR LCRRYG+ L ++PM ++ C+ +++ + +P+D PLIVQ CGNDP +LLA+AK + E C A+DLNLGCPQGIARKG+YGAFLL + L+ IVSTL++ L PVTCK+RLL + +T+ +C+ LV AG ++TVHGRTKEQ C+W+AIR+IK A+PVPVF+NG I+ L DVE+CL T DGVMSSEA+LE PGLFS NV+ VTG + +Q D+ EY++LA Q PP + C+R H+FK +FT V + DLR L A +++M + +R L + D E++WY RH +D+ Q + K+R + G E G+G +FG E+
Sbjct: 38 LEAHVARAWRWYRSMGSPRYVCAPMVDQSELAFRLLCRRYGTQLAFSPMVHAACYLREKRSKRNEVFFCNTNPQDWPLIVQLCGNDPGVLLAAAKEICRIEGVC-AVDLNLGCPQGIARKGKYGAFLLHQADLVVRIVSTLSRELDKPVTCKIRLLPTFSETLALCQALVGAGCSLLTVHGRTKEQNKHLVGSCDWEAIRKIKAAVPVPVFANGGIADLDDVEKCLSFTKVDGVMSSEALLENPGLFSRNVNVVTGHRANQLDLAEEYLELAAQHPPDR-----LKCVRAHVFKLVFTGVQLFEDLRDALVAAENVKEMRWVVGEIRRRALERAQGRDVGSAGERSWYWRHWHKGVTDKGSE----LPRQGKEGGKRRGEEGGVESEGMG-CLFGAED 424
BLAST of mRNA_E-siliculosus-1a_F_contig117.1102.1 vs. uniprot
Match: A0A5D6XL89_9STRA (tRNA-dihydrouridine synthase n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XL89_9STRA) HSP 1 Score: 334 bits (857), Expect = 7.030e-106 Identity = 175/344 (50.87%), Postives = 225/344 (65.41%), Query Frame = 3
Query: 111 GYEFYRSIGSPTRIVAPMVDQSELAFRRLCRRYGSNLCYTPMYNSKCFAVSSAYRKSNFDPHPEDRPLIVQFCGNDPALLLASAKFVEKECDAIDLNLGCPQGIARKGRYGAFLLEEWALLRDIVSTLTKNLSIPVTCKVRLLDSVEDTITMCKMLVAAGARIITVHGRTKEQKSKATAGCNWDAIRRIKEALPVPVFSNGAISSLQDVERCLRETGCDGVMSSEAVLERPGLFS--DNVSKVTGL-KMSQDDIVLEYIDLAKQSPPHSRGRTSVPCLRGHMFKCLFTAVAVRTDLRARLTKARTLEDMEELALAVREARLADPES-------FDEEKTWYRRH 1112
GY+F+ +IG+P RIVAPMVDQSELAFR LCRR+G+ LCYTPM++S+ FA S AYR+ F+ H DRPLIVQFCGNDP +LA+AK VE CDA+DLNLGCPQGIARKGRYG+FL+++ A +R IV TL+ +L++PVT K+R+ ++T+ C ML AAG ++ VHGRTKE A +W ++RIK L +PV +NG I + DV+RCL T DGVMSSEA+LE P LFS D + T +S + EY+ LA+ PP S +R H+FK LF + V TDLR L A+T M + V E R ADP + +WYRRH
Sbjct: 5 GYDFFNAIGAPKRIVAPMVDQSELAFRMLCRRHGAELCYTPMFHSRLFAESPAYREKMFEQHVHDRPLIVQFCGNDPQTMLAAAKLVEGHCDAVDLNLGCPQGIARKGRYGSFLMQDKAAVRAIVETLSAHLAVPVTVKIRVFPDEQETLEFCDMLQAAGCDLLVVHGRTKEMNKTAVRAADWGIVQRIKARLTIPVVANGGIEAPGDVQRCLDATHADGVMSSEAILENPALFSRRDRTTTATATPSLSYVALATEYLALAEDFPP-----ASDKIVRAHLFKLLFQDLRVHTDLRDALAAAKTRVHMAAIVREV-ETRAADPSHPQHRPVVYAAATSWYRRH 342 The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig117.1102.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-siliculosus-1a_F_contig117.1102.1 >prot_E-siliculosus-1a_F_contig117.1102.1 ID=prot_E-siliculosus-1a_F_contig117.1102.1|Name=mRNA_E-siliculosus-1a_F_contig117.1102.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=407bp MREIDESHIGAEALEESGRLGYEFYRSIGSPTRIVAPMVDQSELAFRRLCback to top mRNA from alignment at E-siliculosus-1a_F_contig117:11568..18100+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-siliculosus-1a_F_contig117.1102.1 ID=mRNA_E-siliculosus-1a_F_contig117.1102.1|Name=mRNA_E-siliculosus-1a_F_contig117.1102.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=6533bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig117:11568..18100+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top Coding sequence (CDS) from alignment at E-siliculosus-1a_F_contig117:11568..18100+ >mRNA_E-siliculosus-1a_F_contig117.1102.1 ID=mRNA_E-siliculosus-1a_F_contig117.1102.1|Name=mRNA_E-siliculosus-1a_F_contig117.1102.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=2442bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig117:11568..18100+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top |