mRNA_E-siliculosus-1a_F_contig1169.1099.1 (mRNA) Ectocarpus siliculosus Ec863f_EcPH12_90f female
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Overview
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig1169.1099.1 vs. uniprot
Match: A0A6H5KBP4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KBP4_9PHAE) HSP 1 Score: 579 bits (1492), Expect = 1.010e-196 Identity = 458/572 (80.07%), Postives = 466/572 (81.47%), Query Frame = 1
Query: 517 MSKILVGRSENAIKNRFNSLNAKGLAEMRANELMSKLAPEEKAALLNIDSDPPAPPRPCSSSTANKKRAGVNSTHVGKEKVSXXXXXXXXXXXXXXXXXKVKGGDVDGAPGRSKAGSGRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--VEGRDDRTREGSNALSATGFGTAAGXXXXXXXXXXXXXXXXXXXXXXXXXDAGVGRSAAMEALMVAARGERTACGGSGDEGHDGGDPWNNSNCNRGGAEAGARWKRGWTPAAGEGAERRGRQETAGGSGGGAVAEPGRKAAKRPKGGQARRKTDMARAEAGMSVLAQAAGLLDIEDSVEAADGKSNS--GGGGGDARRNGPDANGMLATDLVDCRSXXXXXXXXXRYPGQY---YGRLQTIGHNGAAFIDHGSTPPGSAXXXXXXXXXXXXXXXXXXXXX---------------------------------------YGXTGXGCGGRTAGTADAFPVGARGASSAGDATSIGRNSEYYHVGGKSSYGXXXXGGERASWGGLPSSSSSWSSSQRWSLHSVPGPWRPYLTGQDGG 2094
MSKILVGRSENAIKNRFNSLNAKGLAEMRANELMSKLAPEEKAALLNIDSDP APPRPCSSS+A KK+AG NSTHVGKEK XXXXXXXXXXXXXXXX KVKGGDVDG GRSK GSGR XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX V+GRDDRTR+GSNA SATGFGTAAGXXXXXXXXXXXXXXXXXXX DAG GRSAAMEALMVAARGERTACGGSGDEGHDGGDPWN SNC R GAEAGARWKRGWTP GEGAERRGRQETAGGSGGGAVAEPGRKAAKRPKGGQARRKTD+ARAEAGMSVLAQAAGLLDIEDSVEAADG SN+ GGGG DA +NG DAN MLA DLVDCRS XXX YGR QT GHNGAA+IDHGSTP XXXXXXXXXXXXXXXXXXXXX YG T X CGGRTA ADAFPVGARGASSA DATSIGRNSEYYHVGGKSSYG GGERASWGGLP SSSS SS QRWSLHSVPGPWRPYLTGQDGG
Sbjct: 1 MSKILVGRSENAIKNRFNSLNAKGLAEMRANELMSKLAPEEKAALLNIDSDPLAPPRPCSSSSATKKKAGANSTHVGKEKXXXXXXXXXXXXXXXXXXSKVKGGDVDGTGGRSKVGSGRKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVDGRDDRTRKGSNASSATGFGTAAGXXXXXXXXXXXXXXXXXXX------DAGFGRSAAMEALMVAARGERTACGGSGDEGHDGGDPWNTSNCKRDGAEAGARWKRGWTPVGGEGAERRGRQETAGGSGGGAVAEPGRKAAKRPKGGQARRKTDIARAEAGMSVLAQAAGLLDIEDSVEAADGNSNNIGGGGGCDAGQNGLDANVMLAIDLVDCRSNFGGSGXXXXXXXXXXXXYGRHQTSGHNGAAYIDHGSTPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGGXXXAAGRASSYGGTXXXCGGRTAENADAFPVGARGASSASDATSIGRNSEYYHVGGKSSYGGESGGGERASWGGLPWSSSSSSSPQRWSLHSVPGPWRPYLTGQDGG 566
BLAST of mRNA_E-siliculosus-1a_F_contig1169.1099.1 vs. uniprot
Match: D7FZ02_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZ02_ECTSI) HSP 1 Score: 452 bits (1162), Expect = 1.860e-148 Identity = 328/616 (53.25%), Postives = 339/616 (55.03%), Query Frame = 1
Query: 94 MNGSRTTSAELWSRDTDLVLRDLVLRSSEEINWNQIATAIEWDSGAVTPSECRERWDYVKETPVKGPWSSEEDDHLKRLVDEFGSKKWNLLARAFPGRSGKQCRERWHNHVDGRVKKGEWSAEEDQILCEAQRQLGNKWSEMSKILVGRSENAIKNRFNSLNAKGLAEMRANELMSKLAPEEKAALLNIDSDPPAPPRPCSSSTANKKRAGVNSTHVGKEKVSXXXXXXXXXXXXXXXXXKVKGGDVDGAPGRSKAGSGRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVEGRDDRTREGSNALSATGFGTAAGXXXXXXXXXXXXXXXXXXXXXXXXXDAGVGRSAAMEALMVAARGERTACGGSGDEGHDGGDPWNNSNCNRGGAEAGARWKRGWTPAAGEGAERRGRQETAGGSGGGAVAEPGRKAAKRPKGGQARRKTDMARAEAGMSVLAQAAGLLDIEDSVEAADGKSNSGGGGGDARRNGPDANGMLATDLVDCRSXXXXXXXXXRYPGQYYGRLQTIGHNGAAFIDHGSTPPGSAXXXXXXXXXXXXXXXXXXXXXYGXTGXGCGGRTAGTADAFPVGARGASSAGDATSIGRNSEYYHVGG 1941
M+GSRTTSAELWSRDTDLVLRDLVLRSSEEINWNQIATAIEWDSGAVTPSECRERW+YVKETPVKGPWSSEEDDHLKRLVDEFGSKKWNLLARAFPGRSGKQCRERWHNHVDGRVKKGEWSAEEDQILCEAQRQLGNKWSEMSKILVGRSENAIKNRFNSLNAKGLAEMRANELMSKLAPEEKAALLNIDSDPPAPPRPC+SSTAN XXX AP + R L A G A AA A RG G+G RRGR + GG RR+ + V AA +S GG RR G+ LV R+ XXXXX RY GQYYGRLQT GHNGAAFIDHGSTPPGSA XXXXXXXXXXX XTG GCGGRTAGTADAFPVGARGASSAGDATSIGRNSEYYHVGG
Sbjct: 1 MSGSRTTSAELWSRDTDLVLRDLVLRSSEEINWNQIATAIEWDSGAVTPSECRERWNYVKETPVKGPWSSEEDDHLKRLVDEFGSKKWNLLARAFPGRSGKQCRERWHNHVDGRVKKGEWSAEEDQILCEAQRQLGNKWSEMSKILVGRSENAIKNRFNSLNAKGLAEMRANELMSKLAPEEKAALLNIDSDPPAPPRPCTSSTANXXXXXXXXXXXXXXXXXXXXMPE------------------SAAP-------------------------------------------------RQWRRSWLPLGARGPPVEA---------------------------------AAERVTTAATRGTIAIATGAG--------------------------------------RRRGRTGSEGGP---------------------RRQ----------EXXXXXXXXXXPREEVAAAPSQSR----GGKRRR------GLRGGRLVGKRNFGXXXXX--RYAGQYYGRLQTNGHNGAAFIDHGSTPPGSASPLPSGPASGXXXXXXXXXXXXXXTGGGCGGRTAGTADAFPVGARGASSAGDATSIGRNSEYYHVGG 435
BLAST of mRNA_E-siliculosus-1a_F_contig1169.1099.1 vs. uniprot
Match: A0A835Z962_9STRA (Homeodomain-like protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z962_9STRA) HSP 1 Score: 161 bits (408), Expect = 2.290e-42 Identity = 79/156 (50.64%), Postives = 110/156 (70.51%), Query Frame = 1
Query: 127 WSRDTDLVLRDLVLRSSEEINWNQIATAIEWDSGA---VTPSECRERWDYVKETPVKGPWSSEEDDHLKRLVDEFGSKKWNLLARAFPGRSGKQCRERWHNHVDGRVKKGEWSAEEDQILCEAQRQLGNKWSEMSKILVGRSENAIKNRFNSLNAK 585
W++D D LR+ VLR W ++ ++ S V EC +RW + + PVKGPW+SEEDD L+ LV ++G+KKW+ +A PGR+GKQCRERW NH+D RV K W+ EED++L +AQR+LGN+WS++S++L GR+ENA+KNRFNSL K
Sbjct: 6 WTKDMDDTLREGVLRYGMS-EWPKVMAHMQVQSHVLEDVESLECHQRWQIICDLPVKGPWASEEDDVLRALVKQYGNKKWSHVATGLPGRTGKQCRERWLNHLDIRVMKTSWTPEEDELLFDAQRELGNQWSKISRMLPGRAENAVKNRFNSLITK 160
BLAST of mRNA_E-siliculosus-1a_F_contig1169.1099.1 vs. uniprot
Match: D8LKP8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKP8_ECTSI) HSP 1 Score: 177 bits (448), Expect = 2.530e-42 Identity = 91/161 (56.52%), Postives = 111/161 (68.94%), Query Frame = 1
Query: 127 WSRDTDLVLRDLVLRSSEEINWNQIATAIEWDSGAVTPSEC-----RERWDYVKETPVKGPWSSEEDDHLKRLVDEFGSKKWNLLARAFPGRSGKQCRERWHNHVDGRVKKGEWSAEEDQILCEAQRQLGNKWSEMSKILVGRSENAIKNRFNSLNAKGLA 594
W R+ D +LR+ VLR + W +++T + P EC +RW VK PVKGPWS EED LK LVDE+G KKW+L+A FPGRSGKQCRERW NH+D RVKK W+ ED LCEAQ +LGNKWSE+SK+L GR+ENA+KNRFNS+ K LA
Sbjct: 83 WDREMDEMLREGVLRYGAD--WEEVSTHM-------APHECPKEEVEKRWQMVKANPVKGPWSPEEDSLLKVLVDEYGRKKWSLIATQFPGRSGKQCRERWLNHLDTRVKKSAWTGAEDMKLCEAQGRLGNKWSEISKLLPGRAENAVKNRFNSIITKRLA 234
BLAST of mRNA_E-siliculosus-1a_F_contig1169.1099.1 vs. uniprot
Match: F0YHL4_AURAN (Uncharacterized protein (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YHL4_AURAN) HSP 1 Score: 152 bits (384), Expect = 2.510e-39 Identity = 78/159 (49.06%), Postives = 108/159 (67.92%), Query Frame = 1
Query: 127 WSRDTDLVLRDLVLR---SSEEINWNQIATAIEWDSGAVTPSECRERWD-YVKETPVKGPWSSEEDDHLKRLVDEFGSKKWNLLARAFPGRSGKQCRERWHNHVDGRVKKGEWSAEEDQILCEAQRQLGNKWSEMSKILVGRSENAIKNRFNSLNAKGL 591
W+ + D VLR+ VLR S+ E + ++ EC RW+ V+ T VKGPW EED L++LV++FG K+W L+A PGR+GKQCRERW NH+D RV K +W+ +ED +L EAQ+++GNKWSE++++L GR+ENA+KNRFNSL K L
Sbjct: 1 WTEEEDAVLREGVLRFGTSAWEDVSRHLLPPVQGGPQKRQAPECEARWEAVVRHTAVKGPWLPEEDSLLRQLVNKFGPKRWALIASHIPGRAGKQCRERWLNHLDTRVIKSDWTPDEDAVLLEAQQRVGNKWSEIARLLPGRAENAVKNRFNSLITKRL 159
BLAST of mRNA_E-siliculosus-1a_F_contig1169.1099.1 vs. uniprot
Match: W7TQR3_9STRA (Myb-related protein a n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TQR3_9STRA) HSP 1 Score: 162 bits (411), Expect = 2.170e-38 Identity = 92/196 (46.94%), Postives = 124/196 (63.27%), Query Frame = 1
Query: 127 WSRDTDLVLRDLVLRSSEEINWNQIATAIEWDSGAVTPSECRERWDYVKETPVKGPWSSEEDDHLKRLVDEFGS--KKWNLLARAFPGRSGKQCRERWHNHVDGRVKKGEWSAEEDQILCEAQRQLGNKWSEMSKILVGRSENAIKNRFNSLNAKGLAEMRANELMSKLAPEEKAALLNIDSDPPAPPRPCSSSTA 708
W+ + D +LR+ +LR+ + W I + S + EC RWD +K+ PVKGPWS EED L+ LV +G KKW++LA+ PGR+GKQCRERW NH+D VKKGEW ED ILC+AQR+LGNKWSE++K+L GR+EN++KNRFNSL + + L E + +L S PP+ P S +TA
Sbjct: 149 WTSEQDDLLREAILRNGTD-KWAAITEHMLPFS--FSSDECAVRWDEIKDVPVKGPWSVEEDALLQLLVGRYGPRPKKWSMLAQHIPGRAGKQCRERWLNHLDRSVKKGEWEEGEDAILCDAQRRLGNKWSEIAKLLPGRAENSVKNRFNSLITRRNSHRYG---PGPLGVGELSTILPSSSAPPSAPCTPSKTTA 338
BLAST of mRNA_E-siliculosus-1a_F_contig1169.1099.1 vs. uniprot
Match: A0A7S2WV82_9STRA (Hypothetical protein n=2 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WV82_9STRA) HSP 1 Score: 162 bits (410), Expect = 7.790e-38 Identity = 84/175 (48.00%), Postives = 117/175 (66.86%), Query Frame = 1
Query: 121 ELWSRDTDLVLRDLVLRSSEEINWNQIATAIEWDSGAVTPSECRERWDYVKETPVKGPWSSEEDDHLKRLVDEFGSKKWNLLARAFPGRSGKQCRERWHNHVDGRVKKGEWSAEEDQILCEAQRQLGNKWSEMSKILVGRSENAIKNRFNSLNAKGLAEMRANELMSKLAPEEKA 645
+ W + D VLR+ VLR NW +++ + S + +C RW VK PVKGPW EED L+ LV +FG K+W+ +A PGR+GKQCRERW NH+D VKK +W+ EED+IL EAQR++GN+WSE++++L GR+ENA+KNR+NSL K L M A + + A EE++
Sbjct: 135 QAWGEEEDAVLREAVLRFGVS-NWPAVSSHM-LPSCHRSADQCEIRWRVVKNNPVKGPWLPEEDQLLRDLVGQFGPKQWSKIAEKIPGRAGKQCRERWLNHLDSSVKKSDWTPEEDKILLEAQRRVGNRWSEIARMLPGRAENAVKNRYNSLITKKLT-MLATQEEQRGAAEERS 306
BLAST of mRNA_E-siliculosus-1a_F_contig1169.1099.1 vs. uniprot
Match: A0A196SGZ8_BLAHN (Transcriptional activator Myb n=1 Tax=Blastocystis sp. subtype 1 (strain ATCC 50177 / NandII) TaxID=478820 RepID=A0A196SGZ8_BLAHN) HSP 1 Score: 156 bits (395), Expect = 3.200e-37 Identity = 85/197 (43.15%), Postives = 124/197 (62.94%), Query Frame = 1
Query: 94 MNGSRTTSAELWSRDTDLVLRDLVLRSSEEINWNQIATAIEWDSGAVTPSECRERWDYV-KETPVKGPWSSEEDDHLKRLVDEFGSKKWNLLARAFPGRSGKQCRERWHNHVDGRVKKGEWSAEEDQILCEAQRQLGNKWSEMSKILVGRSENAIKNRFNSLNAK-GLAEMRANELMSKLAPEEKAALLNIDSDPPA 678
M R + LW+R+ D ++R+ V R +W ++ + + +TP +C+ERW+ V ++ VKGPWS EED L+ LV++FG KKW+ +A GR GKQCRERW NH+ V K W+ EED+IL AQ Q+GNKWS +SK+L GRSENA+KNR+NS+ ++ G+ + R +++ KA LL + P A
Sbjct: 1 MQDQRQADSSLWTRELDEMIREAVARYGSN-DWVKVCQKLR--NQHITPEQCQERWETVLRDQTVKGPWSEEEDAILRSLVEKFGPKKWSTIASYINGRIGKQCRERWLNHLSPTVTKDVWTEEEDEILINAQIQMGNKWSYISKLLPGRSENAVKNRYNSIASRNGVRKKRLGTFVTR--GNSKANLLRLQVPPKA 192
BLAST of mRNA_E-siliculosus-1a_F_contig1169.1099.1 vs. uniprot
Match: A0A8J2SUI4_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SUI4_9STRA) HSP 1 Score: 157 bits (396), Expect = 8.860e-37 Identity = 87/187 (46.52%), Postives = 121/187 (64.71%), Query Frame = 1
Query: 118 AELWSRDTDLVLRDLVLRSSEEINWNQIAT----AIEWDSGAVTPSECRERWDY-VKETPVKGPWSSEEDDHLKRLVDEFGSKKWNLLARAFPGRSGKQCRERWHNHVDGRVKKGEWSAEEDQILCEAQRQLGNKWSEMSKILVGRSENAIKNRFNSLNAKGL-----AEMRANELMSKLAPEEKAA 648
A+ W+ + D VLR+ VLR +W+++A I TP +C+ RWD V+ VKGPW EED+ L++LV +FG K+W L+A PGR+GKQCRERW NH+D RV K +W+ +ED IL +AQ+++GNKWSE+++ L GR+ENA+KNRFNSL K L A+ R + S+ E AA
Sbjct: 57 ADPWTEEEDAVLREGVLRFGTG-DWSKVARHLLPPINGGPQKRTPDDCQARWDAAVRHAAVKGPWLPEEDNLLRQLVAKFGPKRWALIASHIPGRAGKQCRERWLNHLDSRVVKSDWTPDEDAILLDAQQRVGNKWSEIARGLPGRAENAVKNRFNSLITKRLTHGLEAQARRRDRQSESRGEADAA 242
BLAST of mRNA_E-siliculosus-1a_F_contig1169.1099.1 vs. uniprot
Match: K8YTL3_NANGC (V-myb myeloblastosis viral oncogene-like protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=K8YTL3_NANGC) HSP 1 Score: 158 bits (399), Expect = 1.100e-36 Identity = 83/157 (52.87%), Postives = 107/157 (68.15%), Query Frame = 1
Query: 244 ECRERWDYVKETPVKGPWSSEEDDHLKRLVDEFGS--KKWNLLARAFPGRSGKQCRERWHNHVDGRVKKGEWSAEEDQILCEAQRQLGNKWSEMSKILVGRSENAIKNRFNSLNAKGLAEMRANELMSKLAPEEKAALLNIDSDPPAPPRPCSSSTA 708
EC RWD +K+ PVKGPWS EED L++LV +G KKW++LA+ PGR+GKQCRERW NH+D VKKGEW ED ILC+AQR+LGNKWSE++K+L GR+EN++KNRFNSL + + L E + +L S PP+ P S +TA
Sbjct: 56 ECAVRWDEIKDVPVKGPWSVEEDALLQQLVGRYGPRPKKWSMLAQHIPGRAGKQCRERWLNHLDRSVKKGEWEEGEDAILCDAQRRLGNKWSEIAKLLPGRAENSVKNRFNSLITRRNSHRYG---PGPLGVGELSTILPSSSAPPSAPCTPSKTTA 209 The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig1169.1099.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-siliculosus-1a_F_contig1169.1099.1 >prot_E-siliculosus-1a_F_contig1169.1099.1 ID=prot_E-siliculosus-1a_F_contig1169.1099.1|Name=mRNA_E-siliculosus-1a_F_contig1169.1099.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=724bp GDRGQEKRRGGERRTIIPPRGRTSLEDKAASMNGSRTTSAELWSRDTDLVback to top mRNA from alignment at E-siliculosus-1a_F_contig1169:29537..33676+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-siliculosus-1a_F_contig1169.1099.1 ID=mRNA_E-siliculosus-1a_F_contig1169.1099.1|Name=mRNA_E-siliculosus-1a_F_contig1169.1099.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=4140bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1169:29537..33676+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top Coding sequence (CDS) from alignment at E-siliculosus-1a_F_contig1169:29537..33676+ >mRNA_E-siliculosus-1a_F_contig1169.1099.1 ID=mRNA_E-siliculosus-1a_F_contig1169.1099.1|Name=mRNA_E-siliculosus-1a_F_contig1169.1099.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=4344bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1169:29537..33676+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top |