mRNA_E-siliculosus-1a_F_contig11681.1095.1 (mRNA) Ectocarpus siliculosus Ec863f_EcPH12_90f female
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Overview
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig11681.1095.1 vs. uniprot
Match: A0A6H5KKZ1_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KKZ1_9PHAE) HSP 1 Score: 258 bits (658), Expect = 4.970e-77 Identity = 124/131 (94.66%), Postives = 125/131 (95.42%), Query Frame = 1
Query: 25 SEADPTSPGTDKDVDYYQHKSNNHNNFMPWRTGWEAASDTKL---GMNPPPTVTPVPGEGYLCPPGEERNTLEWELARWIVENKVVEEIFGDSIHREVVGRSAKLLRFLSSMEDALTTEHLDLIWSSCVGK 408
SEADPTSPGTDKDVDYYQHKSNN NNFMPWRTGWEAASDTKL GMNPPPTVTPVP EGYLCPPGEE NTLEWELARWIVENKVVEEIFGDSIHREVVGRSAKLL+FLSSMEDALTTEHLDLIWSSCVGK
Sbjct: 388 SEADPTSPGTDKDVDYYQHKSNNQNNFMPWRTGWEAASDTKLLVKGMNPPPTVTPVPSEGYLCPPGEELNTLEWELARWIVENKVVEEIFGDSIHREVVGRSAKLLQFLSSMEDALTTEHLDLIWSSCVGK 518
BLAST of mRNA_E-siliculosus-1a_F_contig11681.1095.1 vs. uniprot
Match: D7G2G5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2G5_ECTSI) HSP 1 Score: 164 bits (414), Expect = 1.500e-45 Identity = 75/83 (90.36%), Postives = 77/83 (92.77%), Query Frame = 1
Query: 31 ADPTSPGTDKDVDYYQHKSNNHNNFMPWRTGWEAASDTKL---GMNPPPTVTPVPGEGYLCPPGEERNTLEWELARWIVENKV 270
ADPTSPGTDKDVDYYQHKSNNHNNFMPWRTGWEAASDTKL G+NPPPTVTPVP EGYLCPP EE NTLEWELARWIVENK+
Sbjct: 359 ADPTSPGTDKDVDYYQHKSNNHNNFMPWRTGWEAASDTKLLVKGVNPPPTVTPVPSEGYLCPPREEYNTLEWELARWIVENKL 441
BLAST of mRNA_E-siliculosus-1a_F_contig11681.1095.1 vs. uniprot
Match: A0A7S2XLE7_9STRA (Hypothetical protein (Fragment) n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2XLE7_9STRA) HSP 1 Score: 124 bits (310), Expect = 3.520e-30 Identity = 65/142 (45.77%), Postives = 82/142 (57.75%), Query Frame = 1
Query: 25 SEADPTSPGTDKDVDYYQHKSNNHNNFMPWRTGWEAASDTKLGMNPPPTVTPVPGEGYLCPPGEERNTLEWELARWIVENKVVEEIFGDSIHREVVGRSAKLLRFLSSMED--------------ALTTEHLDLIWSSCVGK 408
SEAD PGTDKD+DYYQHKS H P GW ++ G+ PPPT+ G G + P GEE NTLE +LA+W ++N ++E + GDS+HREVV RS L+RFL+SM D L HL L W +C K
Sbjct: 405 SEADEEQPGTDKDIDYYQHKSKQHEEAEPPANGWVTCRNS--GIEPPPTLR---GIGLVVPTGEEFNTLEHQLAKWAIDNGIIELVLGDSVHREVVARSTPLIRFLASMCDNGETVDTALHRNTYCLQASHLQLAWKTCTSK 541
BLAST of mRNA_E-siliculosus-1a_F_contig11681.1095.1 vs. uniprot
Match: B8C8H1_THAPS (USP domain-containing protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8C8H1_THAPS) HSP 1 Score: 119 bits (299), Expect = 1.100e-28 Identity = 60/111 (54.05%), Postives = 75/111 (67.57%), Query Frame = 1
Query: 25 SEADPTSPGTDKDVDYYQHKSNNHNNFMPWRTGWEAASDTKLGMNPPPTVTPVPGEGYLCPPGEERNTLEWELARWIVENKVVEEIFGDSIHREVVGRSAKLLRFLSSMED 357
SEAD PGTDKD+DYYQHKS H P +GW + G++PPPT+ PV G+ P GEE NTLE LA+W +EN V+E + GDSIHRE+V RS L++FL+SM D
Sbjct: 555 SEADLDQPGTDKDIDYYQHKSKPHEEAKPSPSGWATC---RSGIDPPPTLRPV---GFQVPEGEEYNTLEHNLAKWAIENGVIELVLGDSIHREIVARSTALIKFLASMCD 659
BLAST of mRNA_E-siliculosus-1a_F_contig11681.1095.1 vs. uniprot
Match: A0A7S2ES67_9STRA (Hypothetical protein (Fragment) n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S2ES67_9STRA) HSP 1 Score: 114 bits (284), Expect = 1.100e-26 Identity = 65/150 (43.33%), Postives = 81/150 (54.00%), Query Frame = 1
Query: 25 SEADPTSPGTDKDVDYYQHKSNNHNNFM-PWRTGWEAASDTKLGMNPPPTVTPVPGEGYLCPPGEERNTLEWELARWIVENKVVEEIFGDSIHREVVGRSAKLLRFLSSM---------------------EDALTTEHLDLIWSSCVGK 408
SEAD PGTDKD+DYYQHK N P GW + S K G +PPP + + G + P GEE NTLE +LA+W +ENKV++ + GDS HRE+V RS L+RFL+ M E L EHL L W +C K
Sbjct: 258 SEADEEQPGTDKDIDYYQHKPTTQNEEAEPPACGW-STSPNKSGEDPPPNLQAI---GLVVPNGEEYNTLEHQLAKWAIENKVIKLVLGDSAHREIVSRSTDLIRFLAGMCEKDEPLEDNSIVSKAGVTPNEYCLKAEHLLLAWKTCTSK 403
BLAST of mRNA_E-siliculosus-1a_F_contig11681.1095.1 vs. uniprot
Match: A0A7S3Q2Z7_9STRA (Hypothetical protein (Fragment) n=2 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3Q2Z7_9STRA) HSP 1 Score: 114 bits (284), Expect = 1.150e-26 Identity = 63/147 (42.86%), Postives = 85/147 (57.82%), Query Frame = 1
Query: 25 SEADPTSPGTDKDVDYYQHKSNNHNNFMPWRTGWEAASDTKLGMNPPPTVTPVPGEGYLCPPGEERNTLEWELARWIVENKVVEEIFGDSIHREVVGRSAKLLRFLSSM--ED-----------------ALTTEHLDLIWSSCVGK 408
SEAD PGTDKD+DYYQ KS + P TGW G++PPP + G+G + P GEE NT+E +LA+W ++NKVVE + G+SIHRE+V RS +L+ FL+SM +D L + HL+L W +C K
Sbjct: 415 SEADEHQPGTDKDIDYYQQKSKKNEETYPPSTGWMTCKSA--GIDPPPFLE---GKGVVAPVGEEFNTMEHQLAQWAIDNKVVELVLGNSIHREIVARSVRLICFLASMCTKDEPVEHVPAGKTMIPNAYCLNSSHLELAWKTCESK 556
BLAST of mRNA_E-siliculosus-1a_F_contig11681.1095.1 vs. uniprot
Match: A0A7R9VSJ1_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9VSJ1_9STRA) HSP 1 Score: 113 bits (282), Expect = 1.930e-26 Identity = 65/150 (43.33%), Postives = 81/150 (54.00%), Query Frame = 1
Query: 25 SEADPTSPGTDKDVDYYQHKSNNHNNFMPWRTGWEAASDTKLGMNPPPTVTPVPGEGYLCPPGEERNTLEWELARWIVENKVVEEIFGDSIHREVVGRSAKLLRFLSSM--------EDA--------------LTTEHLDLIWSSCVGK 408
SEAD PGTDKDVDYYQHKSN P +GW G+ PPPT+ G + P GEE NTLE +LA+W +EN ++E + GDS+HRE+V RS +L+ FL+SM DA L HL L W +C K
Sbjct: 272 SEADEEQPGTDKDVDYYQHKSNKKEEATPPLSGWVTCRSA--GVEPPPTLE---SSGIVVPRGEEYNTLEHQLAKWALENNLIELVLGDSVHREIVARSKELIEFLASMCALDKPLEGDATESVEVGMVANRYCLKPSHLLLAWKTCTSK 416
BLAST of mRNA_E-siliculosus-1a_F_contig11681.1095.1 vs. uniprot
Match: A0A448ZQF1_9STRA (Uncharacterized protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448ZQF1_9STRA) HSP 1 Score: 113 bits (282), Expect = 2.090e-26 Identity = 61/160 (38.12%), Postives = 86/160 (53.75%), Query Frame = 1
Query: 25 SEADPTSPGTDKDVDYYQHKSNNHNNFMPWRTGWEAASDTKLGMNPPPTVTPVPGEGYLCPPGEERNTLEWELARWIVENKVVEE-IFGDSIHREVVGRSAKLLRFLSSMED-------------------------------ALTTEHLDLIWSSCVGK 408
SEAD PGTD+D+DYYQHKS H P TGW + G++P P + + G + PPGEERNTLE +LA+W ++NK+++ + GDS+HRE+V RS L++FL+SM + L + HL L W +C+ K
Sbjct: 440 SEADKEQPGTDRDIDYYQHKSKEHEETEPPLTGWLTCRNA--GVDPSPKLKRI---GLMVPPGEERNTLEHQLAKWAIDNKIIDTLVLGDSVHREIVSRSVPLIKFLASMCERDFGTRTNIDGDRTAVPEESVDGKVDQDTKYCLQSSHLQLAWKTCIRK 594
BLAST of mRNA_E-siliculosus-1a_F_contig11681.1095.1 vs. uniprot
Match: A0A1Z5K2Z6_FISSO (Ubiquitin carboxyl-terminal hydrolase 9/24 n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5K2Z6_FISSO) HSP 1 Score: 112 bits (281), Expect = 2.930e-26 Identity = 59/138 (42.75%), Postives = 85/138 (61.59%), Query Frame = 1
Query: 25 SEADPTSPGTDKDVDYYQHKSNNHNNFMPWRTGWEAASDTKLGMNPPPTVTPVPGEGYLCPPGEERNTLEWELARWIVENKVVEEIFGDS-IHREVVGRSAKLLRFLSSM---------EDALTTEHLDLIWSSCVGK 408
SEAD PGTD+D+DYYQH++ ++ + P GW A ++ G+ PPP + +G L PPG E TLE +LA+W +EN++VE++ GD+ IHREVV RS L++FL++M + L T HL W +C K
Sbjct: 385 SEADEEQPGTDRDIDYYQHRAKDYGDPYPPEQGWVACKNS--GIEPPPILK---AQGLLVPPGAEFETLEHQLAKWAIENEIVEQVLGDTTIHREVVSRSTGLIKFLAAMCARVPPSGNQYCLQTSHLLFAWKTCTRK 517
BLAST of mRNA_E-siliculosus-1a_F_contig11681.1095.1 vs. uniprot
Match: A0A7S2PAR4_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2PAR4_9STRA) HSP 1 Score: 105 bits (263), Expect = 7.350e-24 Identity = 56/128 (43.75%), Postives = 78/128 (60.94%), Query Frame = 1
Query: 25 SEADPTSPGTDKDVDYYQHKSNNHNNFMPWRTGWEAASDTKLGMNPPPTVTPVPGEGYLCPPGEERNTLEWELARWIVENKVVEEIFGDSIHREVVGRSAKLLRFLSSMEDALTTEHLDLIWSSCVGK 408
SEAD PGTDKDVDYYQHKS H+ +P + GW +++ +P PT+ + G + P G+E TLE +LA W ++ V+E + GDS+HREVV RS LL+FL+ + L ++ L W C K
Sbjct: 523 SEADEDQPGTDKDVDYYQHKSKQHDEAIPPQYGWTTCRNSR---DPAPTLLSM---GVMVPHGQEHGTLEHQLANWAMQCGVIELVLGDSVHREVVARSQPLLKFLAQKQ-VLQSKQLLAAWRVCTSK 643 The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig11681.1095.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-siliculosus-1a_F_contig11681.1095.1 >prot_E-siliculosus-1a_F_contig11681.1095.1 ID=prot_E-siliculosus-1a_F_contig11681.1095.1|Name=mRNA_E-siliculosus-1a_F_contig11681.1095.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=136bp MRLSPCAYSEADPTSPGTDKDVDYYQHKSNNHNNFMPWRTGWEAASDTKLback to top mRNA from alignment at E-siliculosus-1a_F_contig11681:375..1801+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-siliculosus-1a_F_contig11681.1095.1 ID=mRNA_E-siliculosus-1a_F_contig11681.1095.1|Name=mRNA_E-siliculosus-1a_F_contig11681.1095.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=1427bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig11681:375..1801+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top Coding sequence (CDS) from alignment at E-siliculosus-1a_F_contig11681:375..1801+ >mRNA_E-siliculosus-1a_F_contig11681.1095.1 ID=mRNA_E-siliculosus-1a_F_contig11681.1095.1|Name=mRNA_E-siliculosus-1a_F_contig11681.1095.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=816bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig11681:375..1801+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top |