mRNA_E-siliculosus-1a_F_contig1165.1080.1 (mRNA) Ectocarpus siliculosus Ec863f_EcPH12_90f female
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Overview
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig1165.1080.1 vs. uniprot
Match: A0A2A5GF86_9FLAO (Uncharacterized protein n=1 Tax=Flavobacteriaceae bacterium TaxID=1871037 RepID=A0A2A5GF86_9FLAO) HSP 1 Score: 414 bits (1065), Expect = 4.920e-141 Identity = 199/373 (53.35%), Postives = 259/373 (69.44%), Query Frame = 1
Query: 7 ITIKLDLRKSGKTANGFPIIVYATQNYKHISIRIGYYAKVTQWSQRLATPKSNHPKYYELLDVLNLLKSNIESIVIRTKREAVALSQLKVLLFKKDYTVFYDAAIDFLGETSRSTKWSAVQSFNKHYPNAGIDMIDRNTAANYIKILLKAGNKPAGVDSYIRSLRALWNKITDKPNPFAKHSIEIPEKVNRMPTIKDIEILENADLTYRGAVGGAGRYRDYWLLMFYLGGIDPEVLSKLRYDVNVSNGRILFNRDKGRSKVACNNVIPPQALKILAKYECRPYLVPIFKAANYETFRGNFERRFKVVCNNLALSELLRPKGARYFFINRAQQLLIDERITAQIVGHRRKTTTSLYTNSFTLEVQDKAHLKIIS 1125
I++KLD RK+G T G+PIIVY + YK + IR+GY++ W+Q LA PK +HPKYYELLD ++L+K I I+ R+A+ +S +K +LFKK ++FY + E R T WSA++SFNK +PN D ID T Y LL+ GNK GVDSY+RSLRA+WN++ NPF IEIPEK+N + T +++ L + DL Y G G +RDY+LLMFYLGGIDPEV++KLRYD ++ RI FNRDKG+SK CNN++P QA +IL KY C+PY VPI +A Y+T GNF++RF+++C + L PK RY FI+RAQQLLIDERI +QIVGH+R T TSLY+N F LEVQDKAHL IIS
Sbjct: 3 ISLKLDRRKNGLTTEGYPIIVYVSHQYKQMYIRLGYWSSDKNWNQSLAVPKKSHPKYYELLDYVDLIKERISEIIKENHRKAILVSDIKDMLFKKKSSIFYIEGMMLYDENYRGTDWSALRSFNKMFPNRVYDDIDTKTVQKYADNLLRRGNKARGVDSYVRSLRAVWNRLDKPDNPFRGIRIEIPEKINPIATTEELIRLRDLDLPYSDGYGSLGNFRDYFLLMFYLGGIDPEVIAKLRYDKHLIGNRIQFNRDKGKSKTFCNNIVPEQAWEILRKYHCKPYFVPIHQATQYKTLMGNFQKRFRLICARVGAEMHLIPKSGRYTFIDRAQQLLIDERIASQIVGHKRTTVTSLYSNDFPLEVQDKAHLSIIS 375
BLAST of mRNA_E-siliculosus-1a_F_contig1165.1080.1 vs. uniprot
Match: A0A1M5P7D1_9FLAO (Site-specific recombinase XerD n=1 Tax=Muricauda flava TaxID=570519 RepID=A0A1M5P7D1_9FLAO) HSP 1 Score: 400 bits (1028), Expect = 2.160e-135 Identity = 196/377 (51.99%), Postives = 261/377 (69.23%), Query Frame = 1
Query: 1 LNITIKLDLRKSGKTANGFPIIVYATQNYKHISIRIGYYAKVTQWSQRLATPKSNHPKYYELLDVLNLLKSNIESIVIRTKREAVALSQLKVLLFKKDYTVFYDAAIDFLGETSRSTKWSAVQSFNKHYPNAGIDMIDRNTAANYIKILLKAGNKPAGVDSYIRSLRALWNKITDKPNPFAKHSIEIPEKVNRMPTIKDIEILENADLTYRGAVGGAGRYRDYWLLMFYLGGIDPEVLSKLRYDVNVSNGRILFNRDKGRSKVACNNVIPPQALKILAKYECR--PYLVPIFKAANYETFRGNFERRFKVVCNNLALSELLRPKGARYFFINRAQQLLIDERITAQIVGHRRKTTTSLYTNSFTLEVQDKAHLKIIS 1125
+ I+IKL+ RK+ KT G+P+IVY T NY+ R G+Y++ + W+++ A P S HP+YY LLD L +LK+ + + + + + ++ + K +F + FYD A++ E R T WSA++ FNK YP++ + + +A ++ LLK GNKP+GVDSYIRSL++LWNK++DKPNPF EIP+ + + + D+ L AD + G YR+YWLLMFYLGGIDPEVLSKLRYD ++ NGRI+FNRDKGRSK CNNVIP +AL IL Y+ P+ VPI++A NY TF GNF RR + + L LS LRPK ARY FI+RAQQLLIDERITAQIVGH+RKTTTS+YTN F L+ QD AHLKII+
Sbjct: 1 MKISIKLNKRKNKKTPKGYPVIVYVTNNYQEKEWRTGFYSESSSWNKQRAVPTSKHPQYYHLLDYLAVLKARLNEVSLESAKRPISFEEAKEWIFNTNRDSFYDLAMNTFKEGYRGTDWSAIRRFNKFYPDSTFNNVTYQSAIDFRNALLKQGNKPSGVDSYIRSLKSLWNKLSDKPNPFKGVVTEIPDTIKTVASKDDLVKLIQADFPFNNGFSGFYHYRNYWLLMFYLGGIDPEVLSKLRYDRHLVNGRIIFNRDKGRSKTLCNNVIPEKALAILETYKDASFPFFVPIYEATNYRTFSGNFSRRMRELSRKLHLSVELRPKSARYTFIDRAQQLLIDERITAQIVGHKRKTTTSIYTNDFPLKFQDNAHLKIIA 377
BLAST of mRNA_E-siliculosus-1a_F_contig1165.1080.1 vs. uniprot
Match: UPI00082ADAF3 (site-specific integrase n=2 Tax=unclassified Muricauda TaxID=2615049 RepID=UPI00082ADAF3) HSP 1 Score: 387 bits (995), Expect = 2.170e-130 Identity = 193/377 (51.19%), Postives = 259/377 (68.70%), Query Frame = 1
Query: 1 LNITIKLDLRKSGKTANGFPIIVYATQNYKHISIRIGYYAKVTQWSQRLATPKSNHPKYYELLDVLNLLKSNIESIVIRTKREAVALSQLKVLLFKKDYTVFYDAAIDFLGETSRSTKWSAVQSFNKHYPNAGIDMIDRNTAANYIKILLKAGNKPAGVDSYIRSLRALWNKITDKPNPFAKHSIEIPEKVNRMPTIKDIEILENADLTYRGAVGGAGRYRDYWLLMFYLGGIDPEVLSKLRYDVNVSNGRILFNRDKGRSKVACNNVIPPQALKILAKYEC--RPYLVPIFKAANYETFRGNFERRFKVVCNNLALSELLRPKGARYFFINRAQQLLIDERITAQIVGHRRKTTTSLYTNSFTLEVQDKAHLKIIS 1125
+N++I ++ RKS KT G+PIIVYA+QNY+ R GYY +++ W+ + + PK+ HP+YY LLD LN LK + I + + + ++ + K +F ++ FY +AI + R T WSA++ FNK YP + + A + LLK GNKP+GVDSYIRSL+ALWN++++KPNPF EIP+ V R+ + +D+ L +++ G YR+YWLLMFYLGGIDPEVL+KLRYD ++ NGRI+FNRDKGRSK ACNN+I QA IL +Y+ PY VPI ++NY+TF GNF RR + + L LS LRPK ARY FI+RAQQLLIDER+TAQIVGH+R+TTTS+YTN F L QD AHLKII+
Sbjct: 1 MNLSITVNKRKSKKTKKGYPIIVYASQNYQDKEWRTGYYTELSDWNSQRSVPKAKHPQYYFLLDYLNALKVRLNEISLESTKRPLSFEEAKTWVFNENRDSFYHSAIKLFEDDYRGTDWSAIRRFNKFYPYSSFTNVSHEIAIGFRDELLKQGNKPSGVDSYIRSLKALWNRLSNKPNPFKGVVTEIPDTVKRVASHQDLLKLIQSEIPNNSGFSGFYHYRNYWLLMFYLGGIDPEVLAKLRYDKHLINGRIVFNRDKGRSKTACNNLIAEQAWTILEQYKKPDSPYFVPIHLSSNYKTFSGNFCRRLRELSMKLDLSIELRPKSARYTFIDRAQQLLIDERVTAQIVGHKRRTTTSIYTNDFPLNFQDDAHLKIIT 377
BLAST of mRNA_E-siliculosus-1a_F_contig1165.1080.1 vs. uniprot
Match: UPI0013D569F7 (tyrosine-type recombinase/integrase n=1 Tax=Flagellimonas sp. CMM7 TaxID=2654676 RepID=UPI0013D569F7) HSP 1 Score: 300 bits (768), Expect = 2.890e-96 Identity = 170/375 (45.33%), Postives = 226/375 (60.27%), Query Frame = 1
Query: 1 LNITIKLDLRKSGKTANGFPIIVYATQNYKHISIRIGYYAKVTQWSQRLATPKSNHPKYYELLDVLNLLKSNIESIVIRTKREAVALSQLKVLLFKKDYTVFYDAAIDFLGETSRSTKWSAVQSFNKHYPNAGIDMIDRNTAANYIKILLKAGNKPAGVDSYIRSLRALWNKITDKPNPFAKHSIEIPEKVNRMPTIKDIEILENADLTYRGAVGGAGRYRDYWLLMFYLGGIDPEVLSKLRYDVNVSNGRILFNRDKGRSKVACNNVIPPQALKILAKYECRPYLVPIFKAANYETFRGNFERRFKVVCNNLALSELLRPKGARYFFINRAQQLLIDERITAQIVGHRRKTTTSLYTNSFTLEVQDKAHLKIIS 1125
+ ++IKLD + G PII+Y T NY +R GY + W+++L+ P HP YY L + LKS I I + R + + +LF+K F++ I+ G STK SA++SF K P+ + + Y K LK P GVDSY RSL+A+WN I+++PNPF +I+IP+K NR+ T +DI+IL NA+L G + YRD WLLMFYLGGID EVL +L+ + N+ R+ FNR KG S+ C+N+I P+A I+ KY+ Y VPI K Y FR NF RRF+ VC L L+ L PK R+ FI+RAQ LLIDERI QIVGH+ KTTTSLYTN F VQD+AH KII+
Sbjct: 1 MKLSIKLDKSQRALNPYGHPIIIYITSNYGEKKVRTGYRTEKNHWNEKLSEPNKKHPDYYNLFRYIEELKSKISKIGFESTRTNLTIEDAVSMLFRKSSDSFFEMGIE--GIDKYSTKASALKSFCKKNPDIKMHEVTSKVVEKYFKNELK-NRSPRGVDSYKRSLKAIWNSISNEPNPF-NVTIKIPDKENRVATTEDIKILVNAELE-----GMSAFYRDCWLLMFYLGGIDLEVLVRLKSE-NIVGDRVNFNRGKGNSEAFCSNIILPEAKAIIDKYK-EDYFVPIHKYI-YREFRSNFSRRFRPVCKKLGLTVELTPKNVRHTFIDRAQNLLIDERIVGQIVGHKFKTTTSLYTNQFPKVVQDEAHAKIIA 363
BLAST of mRNA_E-siliculosus-1a_F_contig1165.1080.1 vs. uniprot
Match: A0A3A9W9N2_9FLAO (Uncharacterized protein n=1 Tax=Aquimarina sp. AD1 TaxID=1714848 RepID=A0A3A9W9N2_9FLAO) HSP 1 Score: 184 bits (467), Expect = 8.370e-53 Identity = 103/228 (45.18%), Postives = 138/228 (60.53%), Query Frame = 1
Query: 451 KAGNKPAGVDSYIRSLRALWNKITDKPNPFAKHSIEIPEKVNRMPTIKDIEILENAD----LTYRGAVGGAGRYRDYWLLMFYLGGIDPEVLSKLRYDVNVSNGRILFNRDKGRSKVACNNVIPPQALKILAKYECRPYLVPIFKAANYETFRGNFERRFKVVCNNLALSELLRPKGARYFFINRAQQLLIDERITAQIVGHRRKTTTSLYTNSFTLEVQDKAHLKII 1122
K P GV SY+ SL +WNK TD NPF+ + + ++ T+ D+ ++N D + RG GG Y +Y +L FYLG ID L LRYD +VSNGRI FNR KG + V +N I P+A ++L KY+C+PYL+P+ NY TF N R F + L LS+ K RY FI RAQQ+LIDERIT +IVGH +++T S+Y + F V+D+AH KII
Sbjct: 4 KKTRSPNGVISYLNSLITIWNKSTDHKNPFSGVKPKKQKTKSKALTVDDLLKIKNNDYASHMNARG--GGIKNYLNYLMLCFYLGRIDLGDLVNLRYDEHVSNGRIEFNRFKGGTNVLVSNYIFPEAWELLQKYDCKPYLIPLALTNNYNTFIPNMSRYFASIQEKLKLSKKPYSKAPRYSFITRAQQILIDERITIKIVGHSQQSTHSIYKDEFPFHVRDEAHKKII 229
BLAST of mRNA_E-siliculosus-1a_F_contig1165.1080.1 vs. uniprot
Match: UPI001BCE6055 (phage integrase SAM-like domain-containing protein n=1 Tax=Flavobacterium sp. CYK-55 TaxID=2835529 RepID=UPI001BCE6055) HSP 1 Score: 158 bits (399), Expect = 5.730e-41 Identity = 123/396 (31.06%), Postives = 189/396 (47.73%), Query Frame = 1
Query: 7 ITIKLDLRKSGKTAN-GFPIIVYATQNYKHISIRIGYYAKVTQWSQRLATPKSNHPKYYELLDVLNLLKSNIESIVIRTKREAVALSQLKVLLFK---KDYTVFYDAAIDFLGETSRSTKWSAVQSFN---KHYPNAGIDMIDRNTAANYIKILLKAGNKPAGVDSYIRSLRALWNKITD----KPNPFAKHSIEIPEKVNRMPT----IKDIEIL-ENADLTYRGAVGGAGRYRDYWLLMFYLGGIDPEVLSKLRYDVNVSNGRILFNRDKGRSKVACNNVIPPQALKILAKYECR-PYLVPIFKAANYETFRGNFERRFKVVCNNL-------ALSELLRPKGARYFFINRAQQLLIDERITAQIVGHRRKTTTSLYTNSFTLEVQDKAHLKII 1122
+TI+ L S K + GF +I+Y N K I Y+ K+ W L PK HP Y++LL+ + K I +I+ + K + V+++Q++ L + + F D L R T + ++N K+ I+ N + LK G K GV Y+R++RA +N+ KP F I KV + + +++ L N +G Y +Y+LL FYLGGID L+ LRYD++V NGRI F R KG + +N I P+AL+IL Y+ PYL+ I K Y + R N+ +RF ++ + K ARY FIN +QL ++ + ++ GH R S+Y S++ E +D H KII
Sbjct: 1 MTIEFKLNTSNKESKKGFALIIYVYLN-KVQKIPTSYHCKIDDWDDMLKEPKRTHPFYFDLLEYVLKTKIKINTILGKPK-DYVSINQVESFLANDNPESFLNFLKNYCDELKANDRKTWVNYNDAYNVMKKYQDEVYFSEINYNFLTRFRDFKLKNGCKAGGVHYYLRTIRATYNEAVKRGAYKPESFVSPFKGIMPKVGKTQDKHFMLSEMKTLFSNLPPKIKGVRPEDYHYHNYFLLCFYLGGIDFIDLANLRYDLHVKNGRIKFTRFKGGTTEFIDNYIIPEALEILEIYKDNSPYLINIHKY-QYISLRNNYIKRFSKFIYSINDENKRPLIESYFTSKTARYTFINLGKQLELNRDVIMELTGHSRGDVHSIYEGSYSYEAKDAVHRKII 393
BLAST of mRNA_E-siliculosus-1a_F_contig1165.1080.1 vs. uniprot
Match: UPI0012AEACBD (site-specific integrase n=3 Tax=Riemerella anatipestifer TaxID=34085 RepID=UPI0012AEACBD) HSP 1 Score: 139 bits (349), Expect = 6.000e-34 Identity = 98/386 (25.39%), Postives = 192/386 (49.74%), Query Frame = 1
Query: 1 LNITIKLDLRKSGKTANGFPIIVYATQNYKHISIRIGYYAKVTQWSQRLATPKSNHPKYYELLDVLNLLKSNIESIVIRTKREAVALSQLKVLLFKKD---YTVFYDAAIDFLGETSRSTKWSAVQSFNKHYPNAGIDMIDRNTAANYIKILLKAGNKPAGVDSYIRSLRALWNKITD----KPNPFAKHSIEIPEKVNRMP----TIKDI-EILENADLTYRGAVGGAGRYRDYWLLMFYLGGIDPEVLSKLRYDVNVSNGRILFNRDKGRSKVACNNVIPPQALKILAKYECRPYLVPIFKAANYETFRGNFERRFKVVCNNLALSELLRPKGARYFFINRAQQLLIDERITAQIVGHRRKTTTSLYTNSFTLEVQDKAHLKII 1122
+ ITIK+D +++ K + + +Y ++ K ++ GYY+ W PK HP + ++D L L K I ++ +++ A Q+K L K Y + + ++ + ++ + + + F + ID N N K K G++SY+++++A++N+ KP+ F ++ E+ + TI+++ +I+ + T +Y Y+LL FYLGG+D ++ L+ + ++ GRI F R KG + +N I P+A +I+ + YL I+K ++ +T RGNF +R++ ++ ++ K RY FIN ++LL++ + ++ GH R S+Y ++ +++D+ H KII
Sbjct: 1 MTITIKIDTKQTKKQGHPIILYIYVSKTDK-MTKYTGYYSTADNWDFEKEEPKRTHPLFVAIMDYL-LEKRRIILNILNSRKRYTA-EQIKNQLLKNSTSLYDFWEERILEIENKGTQDSYRNTLSVFRAFRKEILFEDIDYNLL-NSFKQFKKGTCSNNGINSYLKNIKAVYNEGIRRGLYKPDTFISPFSQVMERAEKTRDKYFTIEELRKIVSKKEKT---------KYDYYFLLSFYLGGLDFIDIASLKKE-HIVGGRIKFERFKGGTNEIIDNFIFPEAYEIINYFNDGEYLTDIYKYSDVKTARGNFNKRYRKQLEHIGINSYFSSKTGRYSFINVGKELLLNRDVIMELTGHSRGDVHSIYEGKYSNKIKDEVHRKII 372
BLAST of mRNA_E-siliculosus-1a_F_contig1165.1080.1 vs. uniprot
Match: UPI001B387C0E (phage integrase SAM-like domain-containing protein n=1 Tax=Flavobacterium erciyesense TaxID=2825842 RepID=UPI001B387C0E) HSP 1 Score: 131 bits (329), Expect = 7.230e-31 Identity = 106/406 (26.11%), Postives = 185/406 (45.57%), Query Frame = 1
Query: 1 LNITIKLDLRKSGKTANGFPIIVYA-TQNYKHISIRIGYYAKVTQWSQRLATPKSNHPKYYELLDVLNLLKSNIESIVIRTKREAVALSQLKVLLFKKDYTVFYDAAIDFLGETSRSTK-----WSAVQSFNKHYPN-AGIDMIDRNTAANYIKILLKAGNKPAGVDSYIRSLRALWNKITDK----PNPFAKHSIEIPEKVNR-------MPTIKDIEILENADLTYRG-AVGGAGR----------YRDYWLLMFYLGGIDPEVLSKLRYDVNVSNGRILFNRDKGRSKVA-CNNVIPPQALKILAKYECRP-YLVPIFKAANYETFRGNFERRFKVVCNNLALSELLRPKGARYFFINRAQQLLIDERITAQIVGHRRKTTTSLYTNSFTLEVQDKAHLKIIS 1125
+ I +KLD RK T+ G+PI +Y + I+ +YA + +++ P HP + L + + K + + +E ++ +++ L ++ F D E R+ K ++ S K + N I+ N +Y L+ G G++ Y+R++RA++N+ + P F K + + +K + + +K + N + Y G + G Y +Y+LL FYLGG+D ++ L+Y +V NGRI+F R KG S NN I P+A IL Y+ YL I++ +Y+ +R N+ +FK + + K ARY FI+ ++L ++ + ++ GH R S+Y F QD H KII+
Sbjct: 1 MKIELKLDKRKI--TSKGYPIKIYVYLKKGSEKWIQTDHYAFLEEFNTETFEPNKKHPNFLFLYEWIATKKVELIKLKNTAAQEKWSMQKIETTLKNENSESFLKFGFDLAAEYKRNEKKVHKTYTLHLSILKQFKNDIAFSDINYNFLISYRDYKLQNGCTTNGINVYLRTMRAIYNEGIKREAFTPTSFKKPFLGVMKKNEKTKDKYFSIDEMKSVIKNLNTNNPYNGPTIKGWNNTEKTKSREYHYHNYFLLCFYLGGLDFIDIANLKYSEHVKNGRIIFKRFKGGSTYEWINNKIFPEAQSILDLYKDESDYLTNIWRKTDYDNYRKNYNLQFKKWLKAIGIESYFTTKTARYTFIDIGKKLELNRDVIMELTGHTRGDVHSVYEGDFLDTTQDDVHFKIIN 404
BLAST of mRNA_E-siliculosus-1a_F_contig1165.1080.1 vs. uniprot
Match: UPI001BA61754 (site-specific integrase n=1 Tax=Carboxylicivirga linearis TaxID=1628157 RepID=UPI001BA61754) HSP 1 Score: 99.8 bits (247), Expect = 1.450e-19 Identity = 110/409 (26.89%), Postives = 189/409 (46.21%), Query Frame = 1
Query: 4 NITIKLDLRKSGKTANGFPIIVYATQNYKHISIRIGYYAKVTQWSQRLATPKSNHPKYYELLDVLNLL---KSN-IESI-VIRTKREAVALSQLKV---LLFKKDYTVFY---DAAIDFLGE-----TSRSTKWSAVQSFNK--HYPNAGIDMIDRNTAANYIKILLKAGNKPAGVDSYIRSLRALWNK-----ITDKPN-PFAKHSIEIPEKVNRMPTIKDIEILENADLTYRGAVGGAGRYRDYWLLMFYLGGIDPEVLSKLRYDVNVSNGRILFNRDKGRSKVACNNVIPPQALKILAKYEC----RPYLVPIFKAANYET-------FRGNFERRFKVVCNNLALSELLRPKGARYFFINRAQQLLIDERITAQIVGHRRKTTTSLYTNSFTLEVQDKAHLKIIS 1125
+I I LD R+ K +PII N K I I GY W + KS++ ++ V N L K+N I+ I V++ K+E LS ++ L KK+Y F+ + I+ L E T+RS K +AV S K + + + ++ NY LK G G S++R++RA++NK + +K PF + +I R +++ I+ + N L Y+ + + R+Y++L FYL G L+ L+ N+ +GR+ + R K I PQ IL Y Y++P+ ++ + + R + +R +++ + + L AR+ F + A L I +Q++GH++ +TT +Y S +V D + K+IS
Sbjct: 4 SIVITLDTRREKKDGT-YPIIFRLCHNQKTIPISTGYSVPKKYWDENNRRIKSSYKGISNVMRVNNFLEKEKANYIDKITVLKDKKELAYLSIQEIKNKLSPKKNYETFFCYSEHLIESLIEQNRIGTARSYK-TAVNSVKKFRNQKDFTFNELNYRFLQNYEAYFLKNGYSLNGFASFMRTVRAIYNKAIKDGVAEKDGYPFDRFTIRTEPTKKRAISLESIQKIAN--LKYKPS-SALFKSRNYFMLSFYLMGASFTDLAHLQLK-NIVDGRVQYKRQKTGKHYDIK--ISPQLQPILDYYTQGKTKEDYILPVIRSKDSKEQYKHIVRARKKYNKRLRLIAEDAEIDTQLTSYVARHTFASLANNLAIPVTAISQMLGHQKLSTTQIYLASLNKKVIDNYNDKVIS 404
BLAST of mRNA_E-siliculosus-1a_F_contig1165.1080.1 vs. uniprot
Match: A0A077KG33_9FLAO (Site-specific recombinase n=1 Tax=Chryseobacterium sp. StRB126 TaxID=878220 RepID=A0A077KG33_9FLAO) HSP 1 Score: 97.8 bits (242), Expect = 6.280e-19 Identity = 99/410 (24.15%), Postives = 184/410 (44.88%), Query Frame = 1
Query: 1 LNITIKLDLRKSGKTANGFPIIVYATQNYKHISIRIGYYAK-VTQWSQRLATPKSNHPKYYELLD--------VLNLLKSN-------IESIVIRTKREAVALS----QLKVLLFKKDYTVFYDAAIDFLGETSRSTKWSA-VQSFNKHYPNAGIDMIDRNTAANYIKILLKAGNKPAGVDSYIRSLRALWNKITD----KP----NPFAKHSIEIPEK--VNRMPTIKDIEILENADLTYRGAVGGAGRYRDYWLLMFYLGGIDPEVLSKLRYDVNVSNGRILFNRDKGRSKVACNNVIPPQALKILAKYE--CRPYLVPIFKAANYETFRGNFERRFKVVCNNLALSELLRPKGARYFFIN-RAQQLLIDERITAQIVGHRRKTTTSLYTNSFTLEVQDKAHLKIISN 1128
+ I LD + + KT P+ +Y + K Y+ V W + PK +HP Y + D +LNL+ S IESI++ + ++K L +D T D + +TK++ + F + ID N + ++ K G+++YI +LRA++N+ KP +PF H I+ K ++ ++K+++I+ + + Y Y++L FYLGG+D ++ L+ + ++ + R+ F R KG ++ +N I +A +I+ ++ ++ PI K Y+ +R + F+ + +L + K RY FIN ++L ++ I +I GH + T S+Y F ++DK H +II +
Sbjct: 1 MKIRFYLDTKTTLKTTGEHPLRLYIYISAKDRKYPFTQYSSLVKDWDFKKEMPKKSHPLYIAISDFLLEKDRKILNLINSRDKRTAPEIESIILGKETSDSVYDFWDVRIKELEIHRDNTSKTD-----IKTGGTATKYTDNLNVFKSYKKTLKFSEIDYNFLYKF-RLEKSKKCKDGGINAYIANLRAVYNQAVKRGIYKPETSVSPF--HGIKTSSKNTKDKYLSLKEMKIIAGNQVDHN--------YYRYFMLCFYLGGLDFIDIASLKKE-HIKDNRVKFIRFKGNTQEVIDNYIFEEAQEIIDYFDEPGSEFITPIHKYV-YKPYRQKYIDGFRKIAEDLKIKTETFSKSPRYSFINIGGKELYLNRDIIKEITGHAQNDTHSIYEGRFPDHIKDKVHKEIIDS 392 The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig1165.1080.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-siliculosus-1a_F_contig1165.1080.1 >prot_E-siliculosus-1a_F_contig1165.1080.1 ID=prot_E-siliculosus-1a_F_contig1165.1080.1|Name=mRNA_E-siliculosus-1a_F_contig1165.1080.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=377bp LNITIKLDLRKSGKTANGFPIIVYATQNYKHISIRIGYYAKVTQWSQRLAback to top mRNA from alignment at E-siliculosus-1a_F_contig1165:33373..34503- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-siliculosus-1a_F_contig1165.1080.1 ID=mRNA_E-siliculosus-1a_F_contig1165.1080.1|Name=mRNA_E-siliculosus-1a_F_contig1165.1080.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=1131bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1165:33373..34503- (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top Coding sequence (CDS) from alignment at E-siliculosus-1a_F_contig1165:33373..34503- >mRNA_E-siliculosus-1a_F_contig1165.1080.1 ID=mRNA_E-siliculosus-1a_F_contig1165.1080.1|Name=mRNA_E-siliculosus-1a_F_contig1165.1080.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=2262bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1165:33373..34503- (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top |