mRNA_E-siliculosus-1a_F_contig1165.1080.1 (mRNA) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E-siliculosus-1a_F_contig1165.1080.1
Unique NamemRNA_E-siliculosus-1a_F_contig1165.1080.1
TypemRNA
OrganismEctocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig1165.1080.1 vs. uniprot
Match: A0A2A5GF86_9FLAO (Uncharacterized protein n=1 Tax=Flavobacteriaceae bacterium TaxID=1871037 RepID=A0A2A5GF86_9FLAO)

HSP 1 Score: 414 bits (1065), Expect = 4.920e-141
Identity = 199/373 (53.35%), Postives = 259/373 (69.44%), Query Frame = 1
Query:    7 ITIKLDLRKSGKTANGFPIIVYATQNYKHISIRIGYYAKVTQWSQRLATPKSNHPKYYELLDVLNLLKSNIESIVIRTKREAVALSQLKVLLFKKDYTVFYDAAIDFLGETSRSTKWSAVQSFNKHYPNAGIDMIDRNTAANYIKILLKAGNKPAGVDSYIRSLRALWNKITDKPNPFAKHSIEIPEKVNRMPTIKDIEILENADLTYRGAVGGAGRYRDYWLLMFYLGGIDPEVLSKLRYDVNVSNGRILFNRDKGRSKVACNNVIPPQALKILAKYECRPYLVPIFKAANYETFRGNFERRFKVVCNNLALSELLRPKGARYFFINRAQQLLIDERITAQIVGHRRKTTTSLYTNSFTLEVQDKAHLKIIS 1125
            I++KLD RK+G T  G+PIIVY +  YK + IR+GY++    W+Q LA PK +HPKYYELLD ++L+K  I  I+    R+A+ +S +K +LFKK  ++FY   +    E  R T WSA++SFNK +PN   D ID  T   Y   LL+ GNK  GVDSY+RSLRA+WN++    NPF    IEIPEK+N + T +++  L + DL Y    G  G +RDY+LLMFYLGGIDPEV++KLRYD ++   RI FNRDKG+SK  CNN++P QA +IL KY C+PY VPI +A  Y+T  GNF++RF+++C  +     L PK  RY FI+RAQQLLIDERI +QIVGH+R T TSLY+N F LEVQDKAHL IIS
Sbjct:    3 ISLKLDRRKNGLTTEGYPIIVYVSHQYKQMYIRLGYWSSDKNWNQSLAVPKKSHPKYYELLDYVDLIKERISEIIKENHRKAILVSDIKDMLFKKKSSIFYIEGMMLYDENYRGTDWSALRSFNKMFPNRVYDDIDTKTVQKYADNLLRRGNKARGVDSYVRSLRAVWNRLDKPDNPFRGIRIEIPEKINPIATTEELIRLRDLDLPYSDGYGSLGNFRDYFLLMFYLGGIDPEVIAKLRYDKHLIGNRIQFNRDKGKSKTFCNNIVPEQAWEILRKYHCKPYFVPIHQATQYKTLMGNFQKRFRLICARVGAEMHLIPKSGRYTFIDRAQQLLIDERIASQIVGHKRTTVTSLYSNDFPLEVQDKAHLSIIS 375          
BLAST of mRNA_E-siliculosus-1a_F_contig1165.1080.1 vs. uniprot
Match: A0A1M5P7D1_9FLAO (Site-specific recombinase XerD n=1 Tax=Muricauda flava TaxID=570519 RepID=A0A1M5P7D1_9FLAO)

HSP 1 Score: 400 bits (1028), Expect = 2.160e-135
Identity = 196/377 (51.99%), Postives = 261/377 (69.23%), Query Frame = 1
Query:    1 LNITIKLDLRKSGKTANGFPIIVYATQNYKHISIRIGYYAKVTQWSQRLATPKSNHPKYYELLDVLNLLKSNIESIVIRTKREAVALSQLKVLLFKKDYTVFYDAAIDFLGETSRSTKWSAVQSFNKHYPNAGIDMIDRNTAANYIKILLKAGNKPAGVDSYIRSLRALWNKITDKPNPFAKHSIEIPEKVNRMPTIKDIEILENADLTYRGAVGGAGRYRDYWLLMFYLGGIDPEVLSKLRYDVNVSNGRILFNRDKGRSKVACNNVIPPQALKILAKYECR--PYLVPIFKAANYETFRGNFERRFKVVCNNLALSELLRPKGARYFFINRAQQLLIDERITAQIVGHRRKTTTSLYTNSFTLEVQDKAHLKIIS 1125
            + I+IKL+ RK+ KT  G+P+IVY T NY+    R G+Y++ + W+++ A P S HP+YY LLD L +LK+ +  + + + +  ++  + K  +F  +   FYD A++   E  R T WSA++ FNK YP++  + +   +A ++   LLK GNKP+GVDSYIRSL++LWNK++DKPNPF     EIP+ +  + +  D+  L  AD  +     G   YR+YWLLMFYLGGIDPEVLSKLRYD ++ NGRI+FNRDKGRSK  CNNVIP +AL IL  Y+    P+ VPI++A NY TF GNF RR + +   L LS  LRPK ARY FI+RAQQLLIDERITAQIVGH+RKTTTS+YTN F L+ QD AHLKII+
Sbjct:    1 MKISIKLNKRKNKKTPKGYPVIVYVTNNYQEKEWRTGFYSESSSWNKQRAVPTSKHPQYYHLLDYLAVLKARLNEVSLESAKRPISFEEAKEWIFNTNRDSFYDLAMNTFKEGYRGTDWSAIRRFNKFYPDSTFNNVTYQSAIDFRNALLKQGNKPSGVDSYIRSLKSLWNKLSDKPNPFKGVVTEIPDTIKTVASKDDLVKLIQADFPFNNGFSGFYHYRNYWLLMFYLGGIDPEVLSKLRYDRHLVNGRIIFNRDKGRSKTLCNNVIPEKALAILETYKDASFPFFVPIYEATNYRTFSGNFSRRMRELSRKLHLSVELRPKSARYTFIDRAQQLLIDERITAQIVGHKRKTTTSIYTNDFPLKFQDNAHLKIIA 377          
BLAST of mRNA_E-siliculosus-1a_F_contig1165.1080.1 vs. uniprot
Match: UPI00082ADAF3 (site-specific integrase n=2 Tax=unclassified Muricauda TaxID=2615049 RepID=UPI00082ADAF3)

HSP 1 Score: 387 bits (995), Expect = 2.170e-130
Identity = 193/377 (51.19%), Postives = 259/377 (68.70%), Query Frame = 1
Query:    1 LNITIKLDLRKSGKTANGFPIIVYATQNYKHISIRIGYYAKVTQWSQRLATPKSNHPKYYELLDVLNLLKSNIESIVIRTKREAVALSQLKVLLFKKDYTVFYDAAIDFLGETSRSTKWSAVQSFNKHYPNAGIDMIDRNTAANYIKILLKAGNKPAGVDSYIRSLRALWNKITDKPNPFAKHSIEIPEKVNRMPTIKDIEILENADLTYRGAVGGAGRYRDYWLLMFYLGGIDPEVLSKLRYDVNVSNGRILFNRDKGRSKVACNNVIPPQALKILAKYEC--RPYLVPIFKAANYETFRGNFERRFKVVCNNLALSELLRPKGARYFFINRAQQLLIDERITAQIVGHRRKTTTSLYTNSFTLEVQDKAHLKIIS 1125
            +N++I ++ RKS KT  G+PIIVYA+QNY+    R GYY +++ W+ + + PK+ HP+YY LLD LN LK  +  I + + +  ++  + K  +F ++   FY +AI    +  R T WSA++ FNK YP +    +    A  +   LLK GNKP+GVDSYIRSL+ALWN++++KPNPF     EIP+ V R+ + +D+  L  +++       G   YR+YWLLMFYLGGIDPEVL+KLRYD ++ NGRI+FNRDKGRSK ACNN+I  QA  IL +Y+    PY VPI  ++NY+TF GNF RR + +   L LS  LRPK ARY FI+RAQQLLIDER+TAQIVGH+R+TTTS+YTN F L  QD AHLKII+
Sbjct:    1 MNLSITVNKRKSKKTKKGYPIIVYASQNYQDKEWRTGYYTELSDWNSQRSVPKAKHPQYYFLLDYLNALKVRLNEISLESTKRPLSFEEAKTWVFNENRDSFYHSAIKLFEDDYRGTDWSAIRRFNKFYPYSSFTNVSHEIAIGFRDELLKQGNKPSGVDSYIRSLKALWNRLSNKPNPFKGVVTEIPDTVKRVASHQDLLKLIQSEIPNNSGFSGFYHYRNYWLLMFYLGGIDPEVLAKLRYDKHLINGRIVFNRDKGRSKTACNNLIAEQAWTILEQYKKPDSPYFVPIHLSSNYKTFSGNFCRRLRELSMKLDLSIELRPKSARYTFIDRAQQLLIDERVTAQIVGHKRRTTTSIYTNDFPLNFQDDAHLKIIT 377          
BLAST of mRNA_E-siliculosus-1a_F_contig1165.1080.1 vs. uniprot
Match: UPI0013D569F7 (tyrosine-type recombinase/integrase n=1 Tax=Flagellimonas sp. CMM7 TaxID=2654676 RepID=UPI0013D569F7)

HSP 1 Score: 300 bits (768), Expect = 2.890e-96
Identity = 170/375 (45.33%), Postives = 226/375 (60.27%), Query Frame = 1
Query:    1 LNITIKLDLRKSGKTANGFPIIVYATQNYKHISIRIGYYAKVTQWSQRLATPKSNHPKYYELLDVLNLLKSNIESIVIRTKREAVALSQLKVLLFKKDYTVFYDAAIDFLGETSRSTKWSAVQSFNKHYPNAGIDMIDRNTAANYIKILLKAGNKPAGVDSYIRSLRALWNKITDKPNPFAKHSIEIPEKVNRMPTIKDIEILENADLTYRGAVGGAGRYRDYWLLMFYLGGIDPEVLSKLRYDVNVSNGRILFNRDKGRSKVACNNVIPPQALKILAKYECRPYLVPIFKAANYETFRGNFERRFKVVCNNLALSELLRPKGARYFFINRAQQLLIDERITAQIVGHRRKTTTSLYTNSFTLEVQDKAHLKIIS 1125
            + ++IKLD  +      G PII+Y T NY    +R GY  +   W+++L+ P   HP YY L   +  LKS I  I   + R  + +     +LF+K    F++  I+  G    STK SA++SF K  P+  +  +       Y K  LK    P GVDSY RSL+A+WN I+++PNPF   +I+IP+K NR+ T +DI+IL NA+L      G +  YRD WLLMFYLGGID EVL +L+ + N+   R+ FNR KG S+  C+N+I P+A  I+ KY+   Y VPI K   Y  FR NF RRF+ VC  L L+  L PK  R+ FI+RAQ LLIDERI  QIVGH+ KTTTSLYTN F   VQD+AH KII+
Sbjct:    1 MKLSIKLDKSQRALNPYGHPIIIYITSNYGEKKVRTGYRTEKNHWNEKLSEPNKKHPDYYNLFRYIEELKSKISKIGFESTRTNLTIEDAVSMLFRKSSDSFFEMGIE--GIDKYSTKASALKSFCKKNPDIKMHEVTSKVVEKYFKNELK-NRSPRGVDSYKRSLKAIWNSISNEPNPF-NVTIKIPDKENRVATTEDIKILVNAELE-----GMSAFYRDCWLLMFYLGGIDLEVLVRLKSE-NIVGDRVNFNRGKGNSEAFCSNIILPEAKAIIDKYK-EDYFVPIHKYI-YREFRSNFSRRFRPVCKKLGLTVELTPKNVRHTFIDRAQNLLIDERIVGQIVGHKFKTTTSLYTNQFPKVVQDEAHAKIIA 363          
BLAST of mRNA_E-siliculosus-1a_F_contig1165.1080.1 vs. uniprot
Match: A0A3A9W9N2_9FLAO (Uncharacterized protein n=1 Tax=Aquimarina sp. AD1 TaxID=1714848 RepID=A0A3A9W9N2_9FLAO)

HSP 1 Score: 184 bits (467), Expect = 8.370e-53
Identity = 103/228 (45.18%), Postives = 138/228 (60.53%), Query Frame = 1
Query:  451 KAGNKPAGVDSYIRSLRALWNKITDKPNPFAKHSIEIPEKVNRMPTIKDIEILENAD----LTYRGAVGGAGRYRDYWLLMFYLGGIDPEVLSKLRYDVNVSNGRILFNRDKGRSKVACNNVIPPQALKILAKYECRPYLVPIFKAANYETFRGNFERRFKVVCNNLALSELLRPKGARYFFINRAQQLLIDERITAQIVGHRRKTTTSLYTNSFTLEVQDKAHLKII 1122
            K    P GV SY+ SL  +WNK TD  NPF+    +  +  ++  T+ D+  ++N D    +  RG  GG   Y +Y +L FYLG ID   L  LRYD +VSNGRI FNR KG + V  +N I P+A ++L KY+C+PYL+P+    NY TF  N  R F  +   L LS+    K  RY FI RAQQ+LIDERIT +IVGH +++T S+Y + F   V+D+AH KII
Sbjct:    4 KKTRSPNGVISYLNSLITIWNKSTDHKNPFSGVKPKKQKTKSKALTVDDLLKIKNNDYASHMNARG--GGIKNYLNYLMLCFYLGRIDLGDLVNLRYDEHVSNGRIEFNRFKGGTNVLVSNYIFPEAWELLQKYDCKPYLIPLALTNNYNTFIPNMSRYFASIQEKLKLSKKPYSKAPRYSFITRAQQILIDERITIKIVGHSQQSTHSIYKDEFPFHVRDEAHKKII 229          
BLAST of mRNA_E-siliculosus-1a_F_contig1165.1080.1 vs. uniprot
Match: UPI001BCE6055 (phage integrase SAM-like domain-containing protein n=1 Tax=Flavobacterium sp. CYK-55 TaxID=2835529 RepID=UPI001BCE6055)

HSP 1 Score: 158 bits (399), Expect = 5.730e-41
Identity = 123/396 (31.06%), Postives = 189/396 (47.73%), Query Frame = 1
Query:    7 ITIKLDLRKSGKTAN-GFPIIVYATQNYKHISIRIGYYAKVTQWSQRLATPKSNHPKYYELLDVLNLLKSNIESIVIRTKREAVALSQLKVLLFK---KDYTVFYDAAIDFLGETSRSTKWSAVQSFN---KHYPNAGIDMIDRNTAANYIKILLKAGNKPAGVDSYIRSLRALWNKITD----KPNPFAKHSIEIPEKVNRMPT----IKDIEIL-ENADLTYRGAVGGAGRYRDYWLLMFYLGGIDPEVLSKLRYDVNVSNGRILFNRDKGRSKVACNNVIPPQALKILAKYECR-PYLVPIFKAANYETFRGNFERRFKVVCNNL-------ALSELLRPKGARYFFINRAQQLLIDERITAQIVGHRRKTTTSLYTNSFTLEVQDKAHLKII 1122
            +TI+  L  S K +  GF +I+Y   N K   I   Y+ K+  W   L  PK  HP Y++LL+ +   K  I +I+ + K + V+++Q++  L     + +  F     D L    R T  +   ++N   K+        I+ N    +    LK G K  GV  Y+R++RA +N+       KP  F      I  KV +       + +++ L  N     +G       Y +Y+LL FYLGGID   L+ LRYD++V NGRI F R KG +    +N I P+AL+IL  Y+   PYL+ I K   Y + R N+ +RF     ++        +      K ARY FIN  +QL ++  +  ++ GH R    S+Y  S++ E +D  H KII
Sbjct:    1 MTIEFKLNTSNKESKKGFALIIYVYLN-KVQKIPTSYHCKIDDWDDMLKEPKRTHPFYFDLLEYVLKTKIKINTILGKPK-DYVSINQVESFLANDNPESFLNFLKNYCDELKANDRKTWVNYNDAYNVMKKYQDEVYFSEINYNFLTRFRDFKLKNGCKAGGVHYYLRTIRATYNEAVKRGAYKPESFVSPFKGIMPKVGKTQDKHFMLSEMKTLFSNLPPKIKGVRPEDYHYHNYFLLCFYLGGIDFIDLANLRYDLHVKNGRIKFTRFKGGTTEFIDNYIIPEALEILEIYKDNSPYLINIHKY-QYISLRNNYIKRFSKFIYSINDENKRPLIESYFTSKTARYTFINLGKQLELNRDVIMELTGHSRGDVHSIYEGSYSYEAKDAVHRKII 393          
BLAST of mRNA_E-siliculosus-1a_F_contig1165.1080.1 vs. uniprot
Match: UPI0012AEACBD (site-specific integrase n=3 Tax=Riemerella anatipestifer TaxID=34085 RepID=UPI0012AEACBD)

HSP 1 Score: 139 bits (349), Expect = 6.000e-34
Identity = 98/386 (25.39%), Postives = 192/386 (49.74%), Query Frame = 1
Query:    1 LNITIKLDLRKSGKTANGFPIIVYATQNYKHISIRIGYYAKVTQWSQRLATPKSNHPKYYELLDVLNLLKSNIESIVIRTKREAVALSQLKVLLFKKD---YTVFYDAAIDFLGETSRSTKWSAVQSFNKHYPNAGIDMIDRNTAANYIKILLKAGNKPAGVDSYIRSLRALWNKITD----KPNPFAKHSIEIPEKVNRMP----TIKDI-EILENADLTYRGAVGGAGRYRDYWLLMFYLGGIDPEVLSKLRYDVNVSNGRILFNRDKGRSKVACNNVIPPQALKILAKYECRPYLVPIFKAANYETFRGNFERRFKVVCNNLALSELLRPKGARYFFINRAQQLLIDERITAQIVGHRRKTTTSLYTNSFTLEVQDKAHLKII 1122
            + ITIK+D +++ K  +   + +Y ++  K ++   GYY+    W      PK  HP +  ++D L L K  I   ++ +++   A  Q+K  L K     Y  + +  ++   + ++ +  + +  F         + ID N   N  K   K      G++SY+++++A++N+       KP+ F     ++ E+  +      TI+++ +I+   + T         +Y  Y+LL FYLGG+D   ++ L+ + ++  GRI F R KG +    +N I P+A +I+  +    YL  I+K ++ +T RGNF +R++    ++ ++     K  RY FIN  ++LL++  +  ++ GH R    S+Y   ++ +++D+ H KII
Sbjct:    1 MTITIKIDTKQTKKQGHPIILYIYVSKTDK-MTKYTGYYSTADNWDFEKEEPKRTHPLFVAIMDYL-LEKRRIILNILNSRKRYTA-EQIKNQLLKNSTSLYDFWEERILEIENKGTQDSYRNTLSVFRAFRKEILFEDIDYNLL-NSFKQFKKGTCSNNGINSYLKNIKAVYNEGIRRGLYKPDTFISPFSQVMERAEKTRDKYFTIEELRKIVSKKEKT---------KYDYYFLLSFYLGGLDFIDIASLKKE-HIVGGRIKFERFKGGTNEIIDNFIFPEAYEIINYFNDGEYLTDIYKYSDVKTARGNFNKRYRKQLEHIGINSYFSSKTGRYSFINVGKELLLNRDVIMELTGHSRGDVHSIYEGKYSNKIKDEVHRKII 372          
BLAST of mRNA_E-siliculosus-1a_F_contig1165.1080.1 vs. uniprot
Match: UPI001B387C0E (phage integrase SAM-like domain-containing protein n=1 Tax=Flavobacterium erciyesense TaxID=2825842 RepID=UPI001B387C0E)

HSP 1 Score: 131 bits (329), Expect = 7.230e-31
Identity = 106/406 (26.11%), Postives = 185/406 (45.57%), Query Frame = 1
Query:    1 LNITIKLDLRKSGKTANGFPIIVYA-TQNYKHISIRIGYYAKVTQWSQRLATPKSNHPKYYELLDVLNLLKSNIESIVIRTKREAVALSQLKVLLFKKDYTVFYDAAIDFLGETSRSTK-----WSAVQSFNKHYPN-AGIDMIDRNTAANYIKILLKAGNKPAGVDSYIRSLRALWNKITDK----PNPFAKHSIEIPEKVNR-------MPTIKDIEILENADLTYRG-AVGGAGR----------YRDYWLLMFYLGGIDPEVLSKLRYDVNVSNGRILFNRDKGRSKVA-CNNVIPPQALKILAKYECRP-YLVPIFKAANYETFRGNFERRFKVVCNNLALSELLRPKGARYFFINRAQQLLIDERITAQIVGHRRKTTTSLYTNSFTLEVQDKAHLKIIS 1125
            + I +KLD RK   T+ G+PI +Y   +      I+  +YA + +++     P   HP +  L + +   K  +  +     +E  ++ +++  L  ++   F     D   E  R+ K     ++   S  K + N      I+ N   +Y    L+ G    G++ Y+R++RA++N+   +    P  F K  + + +K  +       +  +K +    N +  Y G  + G             Y +Y+LL FYLGG+D   ++ L+Y  +V NGRI+F R KG S     NN I P+A  IL  Y+    YL  I++  +Y+ +R N+  +FK     + +      K ARY FI+  ++L ++  +  ++ GH R    S+Y   F    QD  H KII+
Sbjct:    1 MKIELKLDKRKI--TSKGYPIKIYVYLKKGSEKWIQTDHYAFLEEFNTETFEPNKKHPNFLFLYEWIATKKVELIKLKNTAAQEKWSMQKIETTLKNENSESFLKFGFDLAAEYKRNEKKVHKTYTLHLSILKQFKNDIAFSDINYNFLISYRDYKLQNGCTTNGINVYLRTMRAIYNEGIKREAFTPTSFKKPFLGVMKKNEKTKDKYFSIDEMKSVIKNLNTNNPYNGPTIKGWNNTEKTKSREYHYHNYFLLCFYLGGLDFIDIANLKYSEHVKNGRIIFKRFKGGSTYEWINNKIFPEAQSILDLYKDESDYLTNIWRKTDYDNYRKNYNLQFKKWLKAIGIESYFTTKTARYTFIDIGKKLELNRDVIMELTGHTRGDVHSVYEGDFLDTTQDDVHFKIIN 404          
BLAST of mRNA_E-siliculosus-1a_F_contig1165.1080.1 vs. uniprot
Match: UPI001BA61754 (site-specific integrase n=1 Tax=Carboxylicivirga linearis TaxID=1628157 RepID=UPI001BA61754)

HSP 1 Score: 99.8 bits (247), Expect = 1.450e-19
Identity = 110/409 (26.89%), Postives = 189/409 (46.21%), Query Frame = 1
Query:    4 NITIKLDLRKSGKTANGFPIIVYATQNYKHISIRIGYYAKVTQWSQRLATPKSNHPKYYELLDVLNLL---KSN-IESI-VIRTKREAVALSQLKV---LLFKKDYTVFY---DAAIDFLGE-----TSRSTKWSAVQSFNK--HYPNAGIDMIDRNTAANYIKILLKAGNKPAGVDSYIRSLRALWNK-----ITDKPN-PFAKHSIEIPEKVNRMPTIKDIEILENADLTYRGAVGGAGRYRDYWLLMFYLGGIDPEVLSKLRYDVNVSNGRILFNRDKGRSKVACNNVIPPQALKILAKYEC----RPYLVPIFKAANYET-------FRGNFERRFKVVCNNLALSELLRPKGARYFFINRAQQLLIDERITAQIVGHRRKTTTSLYTNSFTLEVQDKAHLKIIS 1125
            +I I LD R+  K    +PII     N K I I  GY      W +     KS++     ++ V N L   K+N I+ I V++ K+E   LS  ++   L  KK+Y  F+   +  I+ L E     T+RS K +AV S  K  +  +   + ++     NY    LK G    G  S++R++RA++NK     + +K   PF + +I       R  +++ I+ + N  L Y+ +     + R+Y++L FYL G     L+ L+   N+ +GR+ + R K          I PQ   IL  Y        Y++P+ ++ + +         R  + +R +++  +  +   L    AR+ F + A  L I     +Q++GH++ +TT +Y  S   +V D  + K+IS
Sbjct:    4 SIVITLDTRREKKDGT-YPIIFRLCHNQKTIPISTGYSVPKKYWDENNRRIKSSYKGISNVMRVNNFLEKEKANYIDKITVLKDKKELAYLSIQEIKNKLSPKKNYETFFCYSEHLIESLIEQNRIGTARSYK-TAVNSVKKFRNQKDFTFNELNYRFLQNYEAYFLKNGYSLNGFASFMRTVRAIYNKAIKDGVAEKDGYPFDRFTIRTEPTKKRAISLESIQKIAN--LKYKPS-SALFKSRNYFMLSFYLMGASFTDLAHLQLK-NIVDGRVQYKRQKTGKHYDIK--ISPQLQPILDYYTQGKTKEDYILPVIRSKDSKEQYKHIVRARKKYNKRLRLIAEDAEIDTQLTSYVARHTFASLANNLAIPVTAISQMLGHQKLSTTQIYLASLNKKVIDNYNDKVIS 404          
BLAST of mRNA_E-siliculosus-1a_F_contig1165.1080.1 vs. uniprot
Match: A0A077KG33_9FLAO (Site-specific recombinase n=1 Tax=Chryseobacterium sp. StRB126 TaxID=878220 RepID=A0A077KG33_9FLAO)

HSP 1 Score: 97.8 bits (242), Expect = 6.280e-19
Identity = 99/410 (24.15%), Postives = 184/410 (44.88%), Query Frame = 1
Query:    1 LNITIKLDLRKSGKTANGFPIIVYATQNYKHISIRIGYYAK-VTQWSQRLATPKSNHPKYYELLD--------VLNLLKSN-------IESIVIRTKREAVALS----QLKVLLFKKDYTVFYDAAIDFLGETSRSTKWSA-VQSFNKHYPNAGIDMIDRNTAANYIKILLKAGNKPAGVDSYIRSLRALWNKITD----KP----NPFAKHSIEIPEK--VNRMPTIKDIEILENADLTYRGAVGGAGRYRDYWLLMFYLGGIDPEVLSKLRYDVNVSNGRILFNRDKGRSKVACNNVIPPQALKILAKYE--CRPYLVPIFKAANYETFRGNFERRFKVVCNNLALSELLRPKGARYFFIN-RAQQLLIDERITAQIVGHRRKTTTSLYTNSFTLEVQDKAHLKIISN 1128
            + I   LD + + KT    P+ +Y   + K        Y+  V  W  +   PK +HP Y  + D        +LNL+ S        IESI++  +           ++K L   +D T   D     +     +TK++  +  F  +        ID N    + ++      K  G+++YI +LRA++N+       KP    +PF  H I+   K   ++  ++K+++I+    + +         Y  Y++L FYLGG+D   ++ L+ + ++ + R+ F R KG ++   +N I  +A +I+  ++     ++ PI K   Y+ +R  +   F+ +  +L +      K  RY FIN   ++L ++  I  +I GH +  T S+Y   F   ++DK H +II +
Sbjct:    1 MKIRFYLDTKTTLKTTGEHPLRLYIYISAKDRKYPFTQYSSLVKDWDFKKEMPKKSHPLYIAISDFLLEKDRKILNLINSRDKRTAPEIESIILGKETSDSVYDFWDVRIKELEIHRDNTSKTD-----IKTGGTATKYTDNLNVFKSYKKTLKFSEIDYNFLYKF-RLEKSKKCKDGGINAYIANLRAVYNQAVKRGIYKPETSVSPF--HGIKTSSKNTKDKYLSLKEMKIIAGNQVDHN--------YYRYFMLCFYLGGLDFIDIASLKKE-HIKDNRVKFIRFKGNTQEVIDNYIFEEAQEIIDYFDEPGSEFITPIHKYV-YKPYRQKYIDGFRKIAEDLKIKTETFSKSPRYSFINIGGKELYLNRDIIKEITGHAQNDTHSIYEGRFPDHIKDKVHKEIIDS 392          
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig1165.1080.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2A5GF86_9FLAO4.920e-14153.35Uncharacterized protein n=1 Tax=Flavobacteriaceae ... [more]
A0A1M5P7D1_9FLAO2.160e-13551.99Site-specific recombinase XerD n=1 Tax=Muricauda f... [more]
UPI00082ADAF32.170e-13051.19site-specific integrase n=2 Tax=unclassified Muric... [more]
UPI0013D569F72.890e-9645.33tyrosine-type recombinase/integrase n=1 Tax=Flagel... [more]
A0A3A9W9N2_9FLAO8.370e-5345.18Uncharacterized protein n=1 Tax=Aquimarina sp. AD1... [more]
UPI001BCE60555.730e-4131.06phage integrase SAM-like domain-containing protein... [more]
UPI0012AEACBD6.000e-3425.39site-specific integrase n=3 Tax=Riemerella anatipe... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_F_contig1165contigE-siliculosus-1a_F_contig1165:33373..34503 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef902022-09-19
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female2021-02-24
Properties
Property NameValue
Start0
Stop1
Cds size1131
Model size1131
Exons1
Hectar predicted targeting categoryother localisation
Best eggNOG OGNA|NA|NA
Best tax levelBacteria
COG Functional cat.L
EggNOG OGsCOG0582@1,COG0582@2
EggNOG free text desc.DNA integration
Seed eggNOG ortholog1250232.JQNJ01000001_gene2860
Seed ortholog evalue7.6e-14
Seed ortholog score85.1
Taxonomic scopeBacteria
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927684.024154-CDS-E-siliculosus-1a_F_contig1165:33372..345031622927684.024154-CDS-E-siliculosus-1a_F_contig1165:33372..34503Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1165 33373..34503 -
1696318637.1831188-CDS-E-siliculosus-1a_F_contig1165:33372..345031696318637.1831188-CDS-E-siliculosus-1a_F_contig1165:33372..34503Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1165 33373..34503 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_F_contig1165.1080.1prot_E-siliculosus-1a_F_contig1165.1080.1Ectocarpus siliculosus Ec863f_EcPH12_90f femalepolypeptideE-siliculosus-1a_F_contig1165 33373..34503 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E-siliculosus-1a_F_contig1165.1080.1

>prot_E-siliculosus-1a_F_contig1165.1080.1 ID=prot_E-siliculosus-1a_F_contig1165.1080.1|Name=mRNA_E-siliculosus-1a_F_contig1165.1080.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=377bp
LNITIKLDLRKSGKTANGFPIIVYATQNYKHISIRIGYYAKVTQWSQRLA
TPKSNHPKYYELLDVLNLLKSNIESIVIRTKREAVALSQLKVLLFKKDYT
VFYDAAIDFLGETSRSTKWSAVQSFNKHYPNAGIDMIDRNTAANYIKILL
KAGNKPAGVDSYIRSLRALWNKITDKPNPFAKHSIEIPEKVNRMPTIKDI
EILENADLTYRGAVGGAGRYRDYWLLMFYLGGIDPEVLSKLRYDVNVSNG
RILFNRDKGRSKVACNNVIPPQALKILAKYECRPYLVPIFKAANYETFRG
NFERRFKVVCNNLALSELLRPKGARYFFINRAQQLLIDERITAQIVGHRR
KTTTSLYTNSFTLEVQDKAHLKIISN*
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mRNA from alignment at E-siliculosus-1a_F_contig1165:33373..34503-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E-siliculosus-1a_F_contig1165.1080.1 ID=mRNA_E-siliculosus-1a_F_contig1165.1080.1|Name=mRNA_E-siliculosus-1a_F_contig1165.1080.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=1131bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1165:33373..34503- (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
TTGAATATTACCATTAAATTAGACCTTAGAAAGTCAGGGAAAACGGCAAA TGGTTTTCCAATAATAGTATATGCTACCCAAAACTACAAGCATATATCAA TAAGAATTGGGTATTATGCAAAGGTTACGCAATGGAGCCAAAGGCTTGCA ACCCCTAAAAGTAATCACCCTAAATACTATGAGCTTTTAGATGTGCTCAA TCTCTTAAAAAGCAATATTGAATCTATTGTAATAAGAACAAAGCGTGAAG CTGTTGCGCTTTCTCAATTAAAAGTATTATTATTTAAAAAAGATTATACG GTATTCTATGATGCGGCAATTGATTTTTTAGGAGAAACAAGTAGAAGTAC GAAATGGTCTGCAGTACAAAGTTTTAATAAGCATTACCCTAATGCTGGTA TTGATATGATTGACCGCAATACTGCTGCTAACTATATAAAAATACTTTTA AAAGCTGGCAATAAACCGGCTGGGGTAGATAGCTATATACGTTCGTTGCG GGCTTTATGGAACAAAATAACCGATAAACCCAACCCATTTGCAAAGCATA GTATAGAGATACCTGAAAAGGTAAACAGAATGCCCACAATAAAAGATATT GAGATTTTAGAAAATGCTGATTTAACTTACCGTGGGGCTGTTGGTGGTGC TGGCCGTTATCGTGATTATTGGTTATTAATGTTCTACCTTGGCGGTATTG ACCCAGAAGTGCTTTCTAAGCTGCGTTATGATGTTAATGTGAGTAATGGC CGTATTTTATTTAATCGTGATAAGGGTAGGTCTAAGGTTGCATGTAATAA CGTGATACCGCCCCAGGCATTAAAGATTTTAGCTAAATATGAATGTAGGC CCTACCTGGTTCCAATTTTTAAAGCTGCGAATTACGAAACCTTTAGGGGT AATTTTGAACGCCGTTTTAAGGTGGTTTGTAATAATTTAGCACTTAGTGA ACTATTAAGGCCTAAAGGAGCTAGGTACTTTTTTATTAACCGCGCGCAAC AATTATTGATTGATGAGCGTATTACAGCGCAAATTGTAGGGCATAGAAGA AAGACCACAACAAGTTTGTACACCAATAGCTTTACTTTAGAGGTGCAAGA TAAGGCCCACCTTAAAATTATTTCAAATTAA
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Coding sequence (CDS) from alignment at E-siliculosus-1a_F_contig1165:33373..34503-

>mRNA_E-siliculosus-1a_F_contig1165.1080.1 ID=mRNA_E-siliculosus-1a_F_contig1165.1080.1|Name=mRNA_E-siliculosus-1a_F_contig1165.1080.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=2262bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1165:33373..34503- (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
TTGAATATTACCATTAAATTAGACCTTAGAAAGTCAGGGAAAACGGCAAA
TGGTTTTCCAATAATAGTATATGCTACCCAAAACTACAAGCATATATCAA
TAAGAATTGGGTATTATGCAAAGGTTACGCAATGGAGCCAAAGGCTTGCA
ACCCCTAAAAGTAATCACCCTAAATACTATGAGCTTTTAGATGTGCTCAA
TCTCTTAAAAAGCAATATTGAATCTATTGTAATAAGAACAAAGCGTGAAG
CTGTTGCGCTTTCTCAATTAAAAGTATTATTATTTAAAAAAGATTATACG
GTATTCTATGATGCGGCAATTGATTTTTTAGGAGAAACAAGTAGAAGTAC
GAAATGGTCTGCAGTACAAAGTTTTAATAAGCATTACCCTAATGCTGGTA
TTGATATGATTGACCGCAATACTGCTGCTAACTATATAAAAATACTTTTA
AAAGCTGGCAATAAACCGGCTGGGGTAGATAGCTATATACGTTCGTTGCG
GGCTTTATGGAACAAAATAACCGATAAACCCAACCCATTTGCAAAGCATA
GTATAGAGATACCTGAAAAGGTAAACAGAATGCCCACAATAAAAGATATT
GAGATTTTAGAAAATGCTGATTTAACTTACCGTGGGGCTGTTGGTGGTGC
TGGCCGTTATCGTGATTATTGGTTATTAATGTTCTACCTTGGCGGTATTG
ACCCAGAAGTGCTTTCTAAGCTGCGTTATGATGTTAATGTGAGTAATGGC
CGTATTTTATTTAATCGTGATAAGGGTAGGTCTAAGGTTGCATGTAATAA
CGTGATACCGCCCCAGGCATTAAAGATTTTAGCTAAATATGAATGTAGGC
CCTACCTGGTTCCAATTTTTAAAGCTGCGAATTACGAAACCTTTAGGGGT
AATTTTGAACGCCGTTTTAAGGTGGTTTGTAATAATTTAGCACTTAGTGA
ACTATTAAGGCCTAAAGGAGCTAGGTACTTTTTTATTAACCGCGCGCAAC
AATTATTGATTGATGAGCGTATTACAGCGCAAATTGTAGGGCATAGAAGA
AAGACCACAACAAGTTTGTACACCAATAGCTTTACTTTAGAGGTGCAAGA
TAAGGCCCACCTTAAAATTATTTCAAATTAATTGAATATTACCATTAAAT
TAGACCTTAGAAAGTCAGGGAAAACGGCAAATGGTTTTCCAATAATAGTA
TATGCTACCCAAAACTACAAGCATATATCAATAAGAATTGGGTATTATGC
AAAGGTTACGCAATGGAGCCAAAGGCTTGCAACCCCTAAAAGTAATCACC
CTAAATACTATGAGCTTTTAGATGTGCTCAATCTCTTAAAAAGCAATATT
GAATCTATTGTAATAAGAACAAAGCGTGAAGCTGTTGCGCTTTCTCAATT
AAAAGTATTATTATTTAAAAAAGATTATACGGTATTCTATGATGCGGCAA
TTGATTTTTTAGGAGAAACAAGTAGAAGTACGAAATGGTCTGCAGTACAA
AGTTTTAATAAGCATTACCCTAATGCTGGTATTGATATGATTGACCGCAA
TACTGCTGCTAACTATATAAAAATACTTTTAAAAGCTGGCAATAAACCGG
CTGGGGTAGATAGCTATATACGTTCGTTGCGGGCTTTATGGAACAAAATA
ACCGATAAACCCAACCCATTTGCAAAGCATAGTATAGAGATACCTGAAAA
GGTAAACAGAATGCCCACAATAAAAGATATTGAGATTTTAGAAAATGCTG
ATTTAACTTACCGTGGGGCTGTTGGTGGTGCTGGCCGTTATCGTGATTAT
TGGTTATTAATGTTCTACCTTGGCGGTATTGACCCAGAAGTGCTTTCTAA
GCTGCGTTATGATGTTAATGTGAGTAATGGCCGTATTTTATTTAATCGTG
ATAAGGGTAGGTCTAAGGTTGCATGTAATAACGTGATACCGCCCCAGGCA
TTAAAGATTTTAGCTAAATATGAATGTAGGCCCTACCTGGTTCCAATTTT
TAAAGCTGCGAATTACGAAACCTTTAGGGGTAATTTTGAACGCCGTTTTA
AGGTGGTTTGTAATAATTTAGCACTTAGTGAACTATTAAGGCCTAAAGGA
GCTAGGTACTTTTTTATTAACCGCGCGCAACAATTATTGATTGATGAGCG
TATTACAGCGCAAATTGTAGGGCATAGAAGAAAGACCACAACAAGTTTGT
ACACCAATAGCTTTACTTTAGAGGTGCAAGATAAGGCCCACCTTAAAATT
ATTTCAAATTAA
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