mRNA_E-siliculosus-1a_F_contig1165.1079.1 (mRNA) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E-siliculosus-1a_F_contig1165.1079.1
Unique NamemRNA_E-siliculosus-1a_F_contig1165.1079.1
TypemRNA
OrganismEctocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig1165.1079.1 vs. uniprot
Match: UPI0013CE83A3 (hypothetical protein n=1 Tax=Mesonia aquimarina TaxID=1504967 RepID=UPI0013CE83A3)

HSP 1 Score: 196 bits (499), Expect = 4.170e-59
Identity = 112/251 (44.62%), Postives = 158/251 (62.95%), Query Frame = 1
Query:   10 MSETKHKFELHSDNNEVIIRTGNAPENFEPRLSIKINGTIDTAFQHLSKPSVTQEYIDEVTKAVALDDIIDVSYLLIDRDEMTIEFVENAGKEFESRYLGSLSLNPDFKKFKINESADYTPLQLAEFIKMNRSFFESKTEAMKLVSTLMNFEAKVNKEVEAKADERANRRVLLAQTVSTNIPESFKLKLPIFKGAEAVAFEVEIGINPVDLSCRLISPDVNDIINSTKNEIINTQKAAIQELYPDLRIFEV 762
            M + K    + +   E+IIR G A +    R    I GTI     HL  PS      D+V      D+++  S + I+R++ +IEF+E+ G+E+ES +LG L     F+KF IN    YT L+L EFIKMNRS FE++ +AMKLV+ L  F+AKV+K++E   D R NR++LLAQ V +NIPESFK+ +PIFKG      +VEI I+  DLSCRLISP+ ND +   ++++I+ +   I+EL+P LRIFEV
Sbjct:    1 MKDQKINVSVENGVKELIIRHGEAEKLPAIRKPAVIEGTISVPRIHLENPS--NWLTDKVENG---DNVLAFSRIEINREKKSIEFIEDEGREWESHFLGVLEFTEIFEKFGINSDKSYTSLELGEFIKMNRSHFETRDKAMKLVNELRKFKAKVDKDIENADDGRGNRKILLAQAVDSNIPESFKITIPIFKGQPKQTLDVEISIDAGDLSCRLISPEANDYVEQMRDKLIDAEIEQIRELHPTLRIFEV 246          
BLAST of mRNA_E-siliculosus-1a_F_contig1165.1079.1 vs. uniprot
Match: A0A519K9V2_FLASP (Uncharacterized protein n=1 Tax=Flavobacterium sp. TaxID=239 RepID=A0A519K9V2_FLASP)

HSP 1 Score: 169 bits (427), Expect = 2.540e-48
Identity = 99/239 (41.42%), Postives = 142/239 (59.41%), Query Frame = 1
Query:   46 DNNEVIIRTGNAPENFEPRLSIKI-NGTIDTAFQHLSKPSVTQEYIDEVTKAVALDDIIDVSYLLIDRDEMTIEFVENAGKEFESRYLGSLSLNPDFKKFKINESADYTPLQLAEFIKMNRSFFESKTEAMKLVSTLMNFEAKVNKEVEAKADERANRRVLLAQTVSTNIPESFKLKLPIFKGAEAVAFEVEIGINPVDLSCRLISPDVNDIINSTKNEIINTQKAAIQELYPDLRIFE 759
            + NEV+IR G A +   P   IKI N TI+   ++L K  ++ + I               S+++   + + ++      +E      G L L+PD   + IN    Y+   LA+FIKMNR +FE+K  AMKLVSTL +F+A ++K++EA  D+RANRRVL+AQ   TNIPE+F L LP+F G E V   VEI IN  DLSC LISPD+  II+    ++I+ +  AI+ LYP+LR+F+
Sbjct:   17 EKNEVVIRRGEAAKIHIP-TGIKIENATINAVQEYLKKNGISADEIQN-------------SFVVFSYENLYLKLSFAHRRENPDSIEGKLKLHPDLSVWDINGKTSYSTFSLADFIKMNRHYFETKDVAMKLVSTLRDFKASIDKKIEAADDKRANRRVLVAQVAETNIPENFALLLPVFVGTEPVKVNVEININADDLSCNLISPDLKQIIDQETKKVIDDELDAIKALYPELRVFQ 241          
BLAST of mRNA_E-siliculosus-1a_F_contig1165.1079.1 vs. uniprot
Match: A0A378RNH7_MYROD (Uncharacterized protein n=2 Tax=Myroides TaxID=76831 RepID=A0A378RNH7_MYROD)

HSP 1 Score: 160 bits (406), Expect = 2.950e-45
Identity = 98/244 (40.16%), Postives = 141/244 (57.79%), Query Frame = 1
Query:   28 KFELHSDNNEVIIRTGNAPENFEPRLSIKINGTIDTAFQHLSKPSVTQEYIDEVTKAVALDDIIDVSYLLIDRDEMTIEFVENAGKEFESRYLGSLSLNPDFKKFKINESADYTPLQLAEFIKMNRSFFESKTEAMKLVSTLMNFEAKVNKEVEAKADERANRRVLLAQTVSTNIPESFKLKLPIFKGAEAVAFEVEIGINPVDLSCRLISPDVNDIINSTKNEIINTQKAAIQELYPDLRIFE 759
            K  + +  NE+++R G+A      R     + TI    + LSK ++T E I        LD ++  S      D+ T+E      +    +   ++ LNPD ++F IN    YT  +LA+FIKMNR +FESK  AM+LVS L NF+AKV+KEVE  +++R NRR+LL Q + +NIPESF L+LP+FKG       VEI IN  D +C LISPD+ + I      +IN Q   I+E++P LRI++
Sbjct:    5 KINVENGVNELVVRQGDASAVHTGRNVNVDSVTIPAVAEFLSKENITTEII--------LDSVLSFSI-----DKRTMELRYGVTQRHPYQINSAIELNPDLERFGINSGNSYTTFELADFIKMNRHYFESKPVAMQLVSELKNFKAKVDKEVENSSNDRGNRRMLLNQVIDSNIPESFVLELPVFKGQPKARVVVEININD-DFTCTLISPDLKEFILLESETLINQQLDLIKEIHPQLRIYQ 234          
BLAST of mRNA_E-siliculosus-1a_F_contig1165.1079.1 vs. uniprot
Match: UPI001C707157 (hypothetical protein n=1 Tax=Bacteroides fragilis TaxID=817 RepID=UPI001C707157)

HSP 1 Score: 160 bits (405), Expect = 6.370e-45
Identity = 92/241 (38.17%), Postives = 142/241 (58.92%), Query Frame = 1
Query:   37 LHSDNNEVIIRTGNAPENFEPRLSIKINGTIDTAFQHLSKPSVTQEYIDEVTKAVALDDIIDVSYLLIDRDEMTIEFVENAGKEFESRYLGSLSLNPDFKKFKINESADYTPLQLAEFIKMNRSFFESKTEAMKLVSTLMNFEAKVNKEVEAKADERANRRVLLAQTVSTNIPESFKLKLPIFKGAEAVAFEVEIGINPVDLSCRLISPDVNDIINSTKNEIINTQKAAIQELYPDLRIFE 759
            L S   E++IR G A E  EP + + I+GT+D   + L     T+  +  V +          +++L+DR+ +TI    N    + S+  GSL ++P+F++F INE    T  ++AE  KMNRS FE+K  AMKLV+ L NF AKV+KE+E   + R ++R+L+ Q V +N+PE+F L +PIFKG       VE+ INP D SC L+S D ND++   ++  ++   + I+E+ PD+ I E
Sbjct:   22 LPSQCGEIVIREGKAMEVREP-VKVGISGTLDAPARWLE----TRMRLGLVNQGA--------NHVLVDREHLTITLQCNENNHYGSKISGSLIVSPEFRRFGINEGEYITNFEMAELFKMNRSHFETKAVAMKLVTELQNFRAKVDKEIEKSDNNRGDKRLLINQVVQSNLPEAFNLHIPIFKGTPKQTVNVEVYINPSDFSCTLVSADANDLLEDMRDSQMDAVLSRIREVCPDIVIIE 249          
BLAST of mRNA_E-siliculosus-1a_F_contig1165.1079.1 vs. uniprot
Match: A0A1I3E0V8_9SPHI (Uncharacterized protein n=1 Tax=Parapedobacter indicus TaxID=1477437 RepID=A0A1I3E0V8_9SPHI)

HSP 1 Score: 159 bits (403), Expect = 1.170e-44
Identity = 94/236 (39.83%), Postives = 140/236 (59.32%), Query Frame = 1
Query:   55 EVIIRTGNAPENFEPRLSIKINGTIDTAFQHLSKPSVTQEYIDEVTKAVALDDIIDVSYLLIDRDEMTIEFVENAGKEFES-RYLGSLSLNPDFKKFKINESADYTPLQLAEFIKMNRSFFESKTEAMKLVSTLMNFEAKVNKEVEAKADERANRRVLLAQTVSTNIPESFKLKLPIFKGAEAVAFEVEIGINPVDLSCRLISPDVNDIINSTKNEIINTQKAAIQELYPDLRIFE 759
            E+IIR G A    EP L +KI G +D+ F+ L      Q+ + E+ +  A        ++ ++R+ +TI    N    + + + +G ++ +P FKKF IN     T  ++AE IKMNRS FE+   AMKLV  L NF+AKV K++E   D+R NR++LL QTV +N+PE FK+ +PIFKG     FEVE+  NP DL+C L+SP+ ND +   ++  I+     I+E+ PD+ I E
Sbjct:   26 ELIIREGKALPALEP-LKVKIAGILDSPFRFL------QKRVGEIDQKKA--------FITVNRESLTITLDFNEDDPYSNGQIVGVITEHPTFKKFGINSGHYRTTYEMAELIKMNRSAFENIQVAMKLVHELKNFKAKVEKDLEKNNDDRGNRKILLQQTVESNVPEKFKVVMPIFKGMPKETFEVEVYFNPDDLTCTLVSPEANDTLEEIRDSAIDEVLHEIEEIAPDIVIIE 246          
BLAST of mRNA_E-siliculosus-1a_F_contig1165.1079.1 vs. uniprot
Match: A0A6I0JRS7_BACUN (Uncharacterized protein n=2 Tax=Bacteroides TaxID=816 RepID=A0A6I0JRS7_BACUN)

HSP 1 Score: 158 bits (400), Expect = 3.570e-44
Identity = 91/235 (38.72%), Postives = 137/235 (58.30%), Query Frame = 1
Query:   55 EVIIRTGNAPENFEPRLSIKINGTIDTAFQHLSKPSVTQEYIDEVTKAVALDDIIDVSYLLIDRDEMTIEFVENAGKEFESRYLGSLSLNPDFKKFKINESADYTPLQLAEFIKMNRSFFESKTEAMKLVSTLMNFEAKVNKEVEAKADERANRRVLLAQTVSTNIPESFKLKLPIFKGAEAVAFEVEIGINPVDLSCRLISPDVNDIINSTKNEIINTQKAAIQELYPDLRIFE 759
            E+IIR G A E  EP + + I+GTID   + L     T+  +  V +           ++L+DR+ + I    N    + S+  GSL ++P+FK+F INE    T  ++AE  KMNRSFFE+K  AMKLV+ L NF AKV+KE+E   + R ++R+L+ Q V +N+PE+F L +PIFKG       VE+ INP D SC L+S + ND++   ++  +++    I  + PD+ I E
Sbjct:   28 EIIIREGKAVEVHEP-VKVVISGTIDAPARWLE----TRMRLGLVNQGTY--------HVLVDRENLNITLKCNENNHYGSKISGSLMVSPEFKRFGINEGEYITNFEMAELFKMNRSFFETKAIAMKLVTELQNFRAKVDKEIEKSDNNRGDKRLLINQAVQSNLPEAFNLHIPIFKGTPKQTINVEVYINPSDFSCTLVSAEANDLLEEMRDREMDSVLERISAVCPDIVIIE 249          
BLAST of mRNA_E-siliculosus-1a_F_contig1165.1079.1 vs. uniprot
Match: A0A1I5E1X1_9FLAO (Uncharacterized protein n=1 Tax=Flavobacterium ummariense TaxID=913024 RepID=A0A1I5E1X1_9FLAO)

HSP 1 Score: 157 bits (398), Expect = 4.800e-44
Identity = 95/235 (40.43%), Postives = 135/235 (57.45%), Query Frame = 1
Query:   55 EVIIRTGNAPENFEPRLSIKINGTIDTAFQHLSKPSVTQEYIDEVTKAVALDDIIDVSYLLIDRDEMTIEFVENAGKEFESRYLGSLSLNPDFKKFKINESADYTPLQLAEFIKMNRSFFESKTEAMKLVSTLMNFEAKVNKEVEAKADERANRRVLLAQTVSTNIPESFKLKLPIFKGAEAVAFEVEIGINPVDLSCRLISPDVNDIINSTKNEIINTQKAAIQELYPDLRIFE 759
            E++IR G A      R     N TI + F+ LSK        + V  ++ LD  +  SY     D + +  V    +    +  GS+ LNPD + F+IN+   Y+  QLA+FIKMNR  FESK+ AM+LVSTL N +A VN+ +EA  D+R N+R L+ Q V +NIPESF ++LPIFKG   V   VE+ ++  DL C L+SPD+  II      +I  +   I+EL+P LRI++
Sbjct:   15 ELVIRNGEAVPVHTGRDVNVTNVTIFSLFEFLSK--------ENVLLSIILDSALIFSY-----DNLAMRLVYGLTERHPYKLNGSILLNPDLEAFEINKGKRYSTFQLADFIKMNRHLFESKSVAMELVSTLKNIKATVNRAIEANKDDRGNKRALIDQVVQSNIPESFNIELPIFKGQPKVVVPVEVVLDE-DLECMLVSPDLKQIIAEESERLIGGEVEKIRELHPQLRIYQ 235          
BLAST of mRNA_E-siliculosus-1a_F_contig1165.1079.1 vs. uniprot
Match: A0A264YA74_9BACT (Uncharacterized protein n=1 Tax=Prevotella sp. 885 TaxID=2022527 RepID=A0A264YA74_9BACT)

HSP 1 Score: 157 bits (396), Expect = 1.300e-43
Identity = 93/235 (39.57%), Postives = 143/235 (60.85%), Query Frame = 1
Query:   55 EVIIRTGNAPENFEPRLSIKINGTIDTAFQHLSKPSVTQEYIDEVTKAVALDDIIDVSYLLIDRDEMTIEFVENAGKEFESRYLGSLSLNPDFKKFKINESADYTPLQLAEFIKMNRSFFESKTEAMKLVSTLMNFEAKVNKEVEAKADERANRRVLLAQTVSTNIPESFKLKLPIFKGAEAVAFEVEIGINPVDLSCRLISPDVNDIINSTKNEIINTQKAAIQELYPDLRIFE 759
            E IIR G+A    EP+ ++ I+GTID   + + K        D++  A A        ++L+DRD+M+I    +    +  + +G+L+L+ + ++F IN     +   +A+ IK  RS+FE+   AMKLV+ L NF+AKV+KE+E   D+R NRR L+AQTV +N+PESFK++LPIFKG   V  EVE+ INP DLSC L+SP+ +DI+   ++  ++     I+E  P + I E
Sbjct:   27 ETIIRFGDALPLKEPK-AVSISGTIDAPARWVEKRK------DDIVSADA--------HVLVDRDKMSITLKTDENSAYSDQIIGTLTLSSEMQEFGINTGESMSCFDMADRIKQLRSYFETTQTAMKLVTELRNFKAKVDKELELSDDKRGNRRGLVAQTVDSNLPESFKIELPIFKGMPKVTIEVEVEINPNDLSCTLVSPEAHDIVLKERDIHMDAVLERIKEAAPAIVIIE 246          
BLAST of mRNA_E-siliculosus-1a_F_contig1165.1079.1 vs. uniprot
Match: A0A2E4PPI6_FLASP (Uncharacterized protein n=1 Tax=Flavobacterium sp. TaxID=239 RepID=A0A2E4PPI6_FLASP)

HSP 1 Score: 156 bits (394), Expect = 2.020e-43
Identity = 95/248 (38.31%), Postives = 139/248 (56.05%), Query Frame = 1
Query:   22 KHKFELHSDNN--EVIIRTGNAPENFEPRLSIKINGTIDTAFQHLSKPSVTQEYIDEVTKAVALDDIIDVSYLLIDRDEMTIEFVENAGKEFESRYLGSLSLNPDFKKFKINESADYTPLQLAEFIKMNRSFFESKTEAMKLVSTLMNFEAKVNKEVEAKADERANRRVLLAQTVSTNIPESFKLKLPIFKGAEAVAFEVEIGINPVDLSCRLISPDVNDIINSTKNEIINTQKAAIQELYPDLRIFE 759
            K K E+  +N+   + IR G  P+   P      +  I +A++ L K  +   +I +             SY+    +E  I    N          G L L+PD KKF+IN+   YT   LA+FI+MNR +FESK  A+KLVS L NF+AKV+KE+E+  D+RAN ++ + Q V +NIP  F L LP+F G+E    +VEI IN  D+SC LISP + ++I++    II+ Q   I+ELYP L++F+
Sbjct:    3 KKKIEITVENSVKALDIREGKLPDLHIPGKIEIYDHVISSAYEFLRKEGIEPCFIKD-------------SYIRYSIEERYINLFYNTRNINPDTVTGVLKLHPDLKKFEINQGKSYTTHSLADFIRMNRHYFESKDVALKLVSELQNFKAKVDKEIESSDDKRANVKMFMVQKVVSNIPTEFVLLLPLFIGSEKTPIKVEIDINAQDISCTLISPALKELIDTESKAIIDQQLKQIEELYPQLKMFQ 237          
BLAST of mRNA_E-siliculosus-1a_F_contig1165.1079.1 vs. uniprot
Match: UPI001EFDE889 (hypothetical protein n=1 Tax=Flavobacterium algicola TaxID=556529 RepID=UPI001EFDE889)

HSP 1 Score: 153 bits (387), Expect = 2.130e-42
Identity = 92/249 (36.95%), Postives = 141/249 (56.63%), Query Frame = 1
Query:   16 ETKHKFELHSDNNEVIIRTGNAPENFEPRLSIKINGTIDTAFQHLSKPSVTQEYIDEVTKAVALDDIIDVSYLLIDRDEMTIEFVENAGKEFESRYLGSLSLNPDFKKFKINESADYTPLQLAEFIKMNRSFFESKTEAMKLVSTLMNFEAKVNKEVEAKADERANRRVLLAQTVSTNIPESFKLKLPIFKGAEAVAFEVEIGINPVDLSCRLISPDVNDIINSTKNEIINTQKAAIQELYPDLRIFEV 762
            E K    +  +N  V +  G A   +     +   G I++A+++LSK +V +  I E +K     D + ++ LL D  + T + +E           G+L L+PD +KF IN    Y+  +LA+FIKMNR +FE+K  AMKLVS L NFE KVN+++E + D+R N+R L+ Q V +NIP  F L+LP+F G +    E+E+ IN     C LISPD+  +I+     I+  Q   I+  +P+L+IFE+
Sbjct:    2 ENKLNITVEKENAVVTLLHGPAEPVYHNAAIVVKGGAINSAYEYLSK-AVVEATIIEHSKIEFCYDKLYIN-LLYDARQRTPDVIE-----------GALKLHPDLQKFNINSGKSYSTFELADFIKMNRHYFENKEYAMKLVSELRNFEGKVNRDIEGRTDDRGNKRALINQVVESNIPSGFFLELPVFVGQDKTRLEIEVSIN-ASFECSLISPDLKQLIDLESKTILGNQLELIKAKHPELKIFEL 236          
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig1165.1079.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
UPI0013CE83A34.170e-5944.62hypothetical protein n=1 Tax=Mesonia aquimarina Ta... [more]
A0A519K9V2_FLASP2.540e-4841.42Uncharacterized protein n=1 Tax=Flavobacterium sp.... [more]
A0A378RNH7_MYROD2.950e-4540.16Uncharacterized protein n=2 Tax=Myroides TaxID=768... [more]
UPI001C7071576.370e-4538.17hypothetical protein n=1 Tax=Bacteroides fragilis ... [more]
A0A1I3E0V8_9SPHI1.170e-4439.83Uncharacterized protein n=1 Tax=Parapedobacter ind... [more]
A0A6I0JRS7_BACUN3.570e-4438.72Uncharacterized protein n=2 Tax=Bacteroides TaxID=... [more]
A0A1I5E1X1_9FLAO4.800e-4440.43Uncharacterized protein n=1 Tax=Flavobacterium umm... [more]
A0A264YA74_9BACT1.300e-4339.57Uncharacterized protein n=1 Tax=Prevotella sp. 885... [more]
A0A2E4PPI6_FLASP2.020e-4338.31Uncharacterized protein n=1 Tax=Flavobacterium sp.... [more]
UPI001EFDE8892.130e-4236.95hypothetical protein n=1 Tax=Flavobacterium algico... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_F_contig1165contigE-siliculosus-1a_F_contig1165:28534..29298 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef902022-09-19
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female2021-02-24
Properties
Property NameValue
Start1
Stop1
Cds size756
Model size765
Exons1
Hectar predicted targeting categoryother localisation
Best eggNOG OGNA|NA|NA
Best tax levelCaudovirales
EggNOG OGs4QBD5@10239,4QTCK@28883,4QZII@35237
Seed eggNOG ortholog1327993.S0A4I7_9CAUD
Seed ortholog evalue3.8e-46
Seed ortholog score191.8
Taxonomic scopeViruses
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927683.9608533-CDS-E-siliculosus-1a_F_contig1165:28533..292891622927683.9608533-CDS-E-siliculosus-1a_F_contig1165:28533..29289Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1165 28534..29289 -
1696318637.155399-CDS-E-siliculosus-1a_F_contig1165:28533..292891696318637.155399-CDS-E-siliculosus-1a_F_contig1165:28533..29289Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1165 28534..29289 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927683.9789326-UTR-E-siliculosus-1a_F_contig1165:29289..292981622927683.9789326-UTR-E-siliculosus-1a_F_contig1165:29289..29298Ectocarpus siliculosus Ec863f_EcPH12_90f femaleUTRE-siliculosus-1a_F_contig1165 29290..29298 -
1696318637.1669827-UTR-E-siliculosus-1a_F_contig1165:29289..292981696318637.1669827-UTR-E-siliculosus-1a_F_contig1165:29289..29298Ectocarpus siliculosus Ec863f_EcPH12_90f femaleUTRE-siliculosus-1a_F_contig1165 29290..29298 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_F_contig1165.1079.1prot_E-siliculosus-1a_F_contig1165.1079.1Ectocarpus siliculosus Ec863f_EcPH12_90f femalepolypeptideE-siliculosus-1a_F_contig1165 28534..29289 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E-siliculosus-1a_F_contig1165.1079.1

>prot_E-siliculosus-1a_F_contig1165.1079.1 ID=prot_E-siliculosus-1a_F_contig1165.1079.1|Name=mRNA_E-siliculosus-1a_F_contig1165.1079.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=252bp
MSETKHKFELHSDNNEVIIRTGNAPENFEPRLSIKINGTIDTAFQHLSKP
SVTQEYIDEVTKAVALDDIIDVSYLLIDRDEMTIEFVENAGKEFESRYLG
SLSLNPDFKKFKINESADYTPLQLAEFIKMNRSFFESKTEAMKLVSTLMN
FEAKVNKEVEAKADERANRRVLLAQTVSTNIPESFKLKLPIFKGAEAVAF
EVEIGINPVDLSCRLISPDVNDIINSTKNEIINTQKAAIQELYPDLRIFE
V*
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mRNA from alignment at E-siliculosus-1a_F_contig1165:28534..29298-

Legend: UTRCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E-siliculosus-1a_F_contig1165.1079.1 ID=mRNA_E-siliculosus-1a_F_contig1165.1079.1|Name=mRNA_E-siliculosus-1a_F_contig1165.1079.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=765bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1165:28534..29298- (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
TATAAAATCATGTCAGAAACAAAGCACAAATTTGAATTACATAGTGATAA TAATGAGGTAATCATTAGAACCGGCAACGCACCTGAAAATTTTGAACCAC GCCTATCAATAAAAATTAATGGCACCATAGATACTGCTTTTCAGCATTTA TCAAAGCCATCGGTAACGCAAGAATATATTGATGAAGTTACTAAGGCGGT TGCATTAGATGACATAATTGATGTGTCTTATTTGTTGATTGACCGTGATG AAATGACCATTGAATTCGTTGAAAACGCTGGTAAAGAATTTGAAAGTAGG TATTTGGGGTCTTTATCTCTTAATCCTGATTTTAAGAAATTCAAGATTAA TGAAAGTGCAGATTATACACCGCTGCAGTTGGCTGAATTTATAAAAATGA ATCGCAGCTTTTTTGAGAGTAAAACTGAGGCAATGAAATTGGTAAGCACT TTGATGAATTTTGAGGCTAAGGTAAATAAAGAAGTAGAGGCTAAAGCAGA TGAACGTGCTAACCGTAGGGTTTTGTTGGCGCAAACTGTGAGTACTAATA TTCCTGAAAGCTTTAAGTTAAAACTGCCAATTTTCAAGGGTGCCGAAGCG GTGGCTTTTGAAGTTGAAATTGGTATTAACCCCGTTGATTTGTCTTGTAG GCTGATTTCACCTGATGTTAATGACATCATTAATTCAACTAAAAATGAGA TAATTAACACGCAAAAAGCCGCTATTCAAGAGCTTTACCCAGACCTTAGA ATATTTGAAGTATAA
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Coding sequence (CDS) from alignment at E-siliculosus-1a_F_contig1165:28534..29298-

>mRNA_E-siliculosus-1a_F_contig1165.1079.1 ID=mRNA_E-siliculosus-1a_F_contig1165.1079.1|Name=mRNA_E-siliculosus-1a_F_contig1165.1079.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=1512bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1165:28534..29298- (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
ATGTCAGAAACAAAGCACAAATTTGAATTACATAGTGATAATAATGAGGT
AATCATTAGAACCGGCAACGCACCTGAAAATTTTGAACCACGCCTATCAA
TAAAAATTAATGGCACCATAGATACTGCTTTTCAGCATTTATCAAAGCCA
TCGGTAACGCAAGAATATATTGATGAAGTTACTAAGGCGGTTGCATTAGA
TGACATAATTGATGTGTCTTATTTGTTGATTGACCGTGATGAAATGACCA
TTGAATTCGTTGAAAACGCTGGTAAAGAATTTGAAAGTAGGTATTTGGGG
TCTTTATCTCTTAATCCTGATTTTAAGAAATTCAAGATTAATGAAAGTGC
AGATTATACACCGCTGCAGTTGGCTGAATTTATAAAAATGAATCGCAGCT
TTTTTGAGAGTAAAACTGAGGCAATGAAATTGGTAAGCACTTTGATGAAT
TTTGAGGCTAAGGTAAATAAAGAAGTAGAGGCTAAAGCAGATGAACGTGC
TAACCGTAGGGTTTTGTTGGCGCAAACTGTGAGTACTAATATTCCTGAAA
GCTTTAAGTTAAAACTGCCAATTTTCAAGGGTGCCGAAGCGGTGGCTTTT
GAAGTTGAAATTGGTATTAACCCCGTTGATTTGTCTTGTAGGCTGATTTC
ACCTGATGTTAATGACATCATTAATTCAACTAAAAATGAGATAATTAACA
CGCAAAAAGCCGCTATTCAAGAGCTTTACCCAGACCTTAGAATATTTGAA
GTATAAATGTCAGAAACAAAGCACAAATTTGAATTACATAGTGATAATAA
TGAGGTAATCATTAGAACCGGCAACGCACCTGAAAATTTTGAACCACGCC
TATCAATAAAAATTAATGGCACCATAGATACTGCTTTTCAGCATTTATCA
AAGCCATCGGTAACGCAAGAATATATTGATGAAGTTACTAAGGCGGTTGC
ATTAGATGACATAATTGATGTGTCTTATTTGTTGATTGACCGTGATGAAA
TGACCATTGAATTCGTTGAAAACGCTGGTAAAGAATTTGAAAGTAGGTAT
TTGGGGTCTTTATCTCTTAATCCTGATTTTAAGAAATTCAAGATTAATGA
AAGTGCAGATTATACACCGCTGCAGTTGGCTGAATTTATAAAAATGAATC
GCAGCTTTTTTGAGAGTAAAACTGAGGCAATGAAATTGGTAAGCACTTTG
ATGAATTTTGAGGCTAAGGTAAATAAAGAAGTAGAGGCTAAAGCAGATGA
ACGTGCTAACCGTAGGGTTTTGTTGGCGCAAACTGTGAGTACTAATATTC
CTGAAAGCTTTAAGTTAAAACTGCCAATTTTCAAGGGTGCCGAAGCGGTG
GCTTTTGAAGTTGAAATTGGTATTAACCCCGTTGATTTGTCTTGTAGGCT
GATTTCACCTGATGTTAATGACATCATTAATTCAACTAAAAATGAGATAA
TTAACACGCAAAAAGCCGCTATTCAAGAGCTTTACCCAGACCTTAGAATA
TTTGAAGTATAA
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