mRNA_E-siliculosus-1a_F_contig1165.1075.1 (mRNA) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E-siliculosus-1a_F_contig1165.1075.1
Unique NamemRNA_E-siliculosus-1a_F_contig1165.1075.1
TypemRNA
OrganismEctocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig1165.1075.1 vs. uniprot
Match: A0A7L8AFC4_9FLAO (Tyrosine-type recombinase/integrase n=1 Tax=Polaribacter haliotis TaxID=1888915 RepID=A0A7L8AFC4_9FLAO)

HSP 1 Score: 244 bits (623), Expect = 1.900e-77
Identity = 119/260 (45.77%), Postives = 184/260 (70.77%), Query Frame = 1
Query:    1 MNTLEIFEKRLKQKNYSPRTIKAYVFYLKRFLMAQQKSPSHITFGDITKYLLNQEYSSTSQQNQIIGALKLYAKYMLNRSNLHIDKIERPRREKKLPMVLDGPTTEKNIKAIENLKHRCLLTVLFSGALRVSELLNIKLGDIDRHRMVIKINLGKGAKDRIVPVSQETLKLIEQYYRKYRPVEYLFNGQKSLKYTASSVNKLVKRHLHKDASAHTLRHTCATYLHEKGVDIATISKFLGHSNVKTTMVYLKISNKVIQRL 780
            M ++EI++++L  KNYS RTI+ YV YL++FL   +K+P HIT  +I  YLLN+ YSS S QNQ+IG+LKL+AKY+L +  +H++KIERP+REKKLP ++D     + I  ++NLKH+ +LT+  S  LR+SE++N+K  D+D+ R V+ +  GKG KDRI  ++   ++L+ +Y+ +YR  EY+FNGQ   +Y+A+S+ +LVK+++H  AS H LRH+ ATY  + G  I  ++  +GH+++KTT +Y   S K +Q L
Sbjct:    1 MKSVEIYKQKLTNKNYSKRTIETYVCYLEKFLQEIKKNPYHITTKEIENYLLNKNYSSISVQNQVIGSLKLFAKYILGKKEVHLNKIERPKREKKLPRIIDAELLAERISMVKNLKHKAILTLGLSCGLRISEVINLKWLDLDKKRNVLNVINGKGKKDRITFLNNNLIELLTEYWLEYRSEEYVFNGQFKNQYSATSIQRLVKKYIHPTASFHLLRHSFATYALDNGTGIGALADIMGHNSIKTTEIYYHTSLKAVQNL 260          
BLAST of mRNA_E-siliculosus-1a_F_contig1165.1075.1 vs. uniprot
Match: A0A6J5Q1U6_9CAUD (Integrase n=1 Tax=uncultured Caudovirales phage TaxID=2100421 RepID=A0A6J5Q1U6_9CAUD)

HSP 1 Score: 218 bits (556), Expect = 2.810e-67
Identity = 117/264 (44.32%), Postives = 176/264 (66.67%), Query Frame = 1
Query:   10 LEIFEKRLKQKNYSPRTIKAYVFYLKRFLMAQ-QKSPSHITFGDITKYLLNQEYSSTSQQNQIIGALKLYAKYMLNRSNLHIDKI--ERPRREKKLPMVLDGPTTEKNIKAIENLKHRCLLTVLFSGALRVSELLNIKLGDIDRHRMVIKINLGKGAKDRIVPVSQETLKLIEQYYRKYRPVEYLFNGQKSLKYTASSVNKLVKRHLHKDASAHTLRHTCATYLHEKGVDIATISKFLGHSNVKTTMVYLKISNKVIQRLPIPM 792
            ++I E++    NYSPRT + Y+ ++KRFL +  +K   H    D   YL + ++ S SQQNQII +++   K+ LN+     DK+  +RPR EKKLP V+D     + ++ IEN+KH+ +LT+ FS  LRVSE++++K+ DID  RM+I I   KG KDRIVP+SQ  L+L+ +Y+++YRP EYLFNGQ S KY+  S  K+ K+++ K++S HTLRH+  T L E G D+  I K  GHS+ KTT +Y  +SN+V+ ++ +P+
Sbjct:    7 IKICEEKFIYLNYSPRTRENYMSHIKRFLESLGEKQIIHCNSSDFQNYLDSYKFLSVSQQNQIINSIRFLYKFGLNKK---YDKVSFKRPRSEKKLPKVIDSDFIRERLEKIENVKHKSILTLTFSVGLRVSEVVDLKISDIDSKRMLIHIKNAKGKKDRIVPLSQRVLELLREYWKEYRPTEYLFNGQSSTKYSIGSCQKIYKKYIDKNSSIHTLRHSSFTSLLENGTDLRIIQKIAGHSSSKTTEIYTHVSNQVLNKVNLPI 267          
BLAST of mRNA_E-siliculosus-1a_F_contig1165.1075.1 vs. uniprot
Match: UPI00115F193B (tyrosine-type recombinase/integrase n=1 Tax=Changchengzhania lutea TaxID=2049305 RepID=UPI00115F193B)

HSP 1 Score: 203 bits (516), Expect = 3.130e-61
Identity = 105/259 (40.54%), Postives = 168/259 (64.86%), Query Frame = 1
Query:    4 NTLEIFEKRLKQKNYSPRTIKAYVFYLKRFLMAQQKSPSHITFGDITKYLLNQEYSSTSQQNQIIGALKLYAKYMLNRSNLHIDKIERPRREKKLPMVLDGPTTEKNIKAIENLKHRCLLTVLFSGALRVSELLNIKLGDIDRHRMVIKINLGKGAKDRIVPVSQETLKLIEQYYRKYRPVEYLFNGQKSLKYTASSVNKLVKRHLHKDASAHTLRHTCATYLHEKGVDIATISKFLGHSNVKTTMVYLKISNKVIQRL 780
            +TLE  EK+L+ +NYS +TIK Y+ Y ++FL++  K   HI+  +   YL +  Y+S SQQNQII ++K     ++ R  L+   I RPR+EKKLP ++D     + I  I NLKH+ +L++  S  LR+SE++N+K   +DR R  + +  GKG KDR   ++   + L+ +Y+++Y+P +Y+FNGQ   KY+ SS+ ++VK+H+H+ AS H LRH+ ATY  + G ++A +SK +GH N KTT +Y  +SN  ++ +
Sbjct:    7 STLEKLEKKLRFRNYSEQTIKTYLSYSEKFLISFNKDVYHISVKEAENYLESYPYTSISQQNQIISSVKFLYINVVGRK-LNTLNIVRPRKEKKLPKIIDAELLAEKINKINNLKHKAILSLGLSCGLRISEVINLKWEHLDRKRNTLTVINGKGRKDRTTILNDNMIDLLTEYWKQYKPKDYVFNGQFKNKYSQSSIQRIVKKHIHQKASFHFLRHSFATYALDNGTELAPLSKSMGHQNTKTTEIYYHVSNNSLKTI 264          
BLAST of mRNA_E-siliculosus-1a_F_contig1165.1075.1 vs. uniprot
Match: A0A7C4P9V4_9BACT (Recombinase n=1 Tax=Ignavibacteria bacterium TaxID=2053306 RepID=A0A7C4P9V4_9BACT)

HSP 1 Score: 193 bits (490), Expect = 3.160e-57
Identity = 115/273 (42.12%), Postives = 174/273 (63.74%), Query Frame = 1
Query:    1 MNTLEIFEKRLKQKNYSPRTIKAYVFYLKRF-LMAQQKSPSHITFGDITKYLLNQ---EYSSTSQQNQIIGALKLYAKYMLNRSNLHIDKIERPRREKKLPMVLDGPTTEKNIKAIENLKHRCLLTVLFSGALRVSELLNIKLGDIDRHRMVIKINLGKGAKDRIVPVSQETLKLIEQYYRKYRPVEYLFNGQKSLKYTASSVNKLVKRHLH-----KDASAHTLRHTCATYLHEKGVDIATISKFLGHSNVKTTMVYLKISNKVIQRLPIPM 792
            MN L+ F+K L  K YS RTIK+Y   LK F L  + K+P +I   +I +++      +  S S Q  ++G++KL+   +L R N  ++ +   R EKKLP+VLD    +  + +I+NLKH+ +L++++S  LR+SE++ +KL DID  RM+IKIN GKG KDR V +S++ L ++ +YY++Y+  EYLF GQK  KY+A SV  + K  L      K+AS HTLRH+ AT+L E G DI  I + LGHS++KTT +Y ++S+  I  +  P+
Sbjct:    1 MNYLDDFKKLLTIKRYSFRTIKSYSNALKTFFLYFEHKNPENINPSEIEQFINKMVLIDNISQSYQKVLVGSIKLFYNELL-RKNYKLNYLYPDRPEKKLPVVLDKSEIQLLLNSIQNLKHKAILSLIYSAGLRLSEVIEMKLTDIDSKRMLIKINQGKGKKDRYVMLSEKLLIILIEYYKEYKLKEYLFEGQKGGKYSARSVQAIFKEALRNSKIKKEASVHTLRHSFATHLLESGTDIRIIQQLLGHSSLKTTQIYTQVSSSKISEIKSPL 272          
BLAST of mRNA_E-siliculosus-1a_F_contig1165.1075.1 vs. uniprot
Match: A0A7X9BC17_9MOLU (Tyrosine-type recombinase/integrase n=1 Tax=Mollicutes bacterium TaxID=37628 RepID=A0A7X9BC17_9MOLU)

HSP 1 Score: 192 bits (487), Expect = 5.130e-56
Identity = 107/262 (40.84%), Postives = 167/262 (63.74%), Query Frame = 1
Query:   31 LKQKNYSPRTIKAYVFYLKRFLMAQQKSPSHITFGDITKYL----LNQEYSSTSQQNQIIGALKLYAKYMLNRSNLHIDKIERPRREKKLPMVLDGPTTEKNIKAIENLKHRCLLTVLFSGALRVSELLNIKLGDIDRHRMVIKINLGKGAKDRIVPVSQETLKLIEQYYRKYRPVEYLFNGQKSLKYTASSVNKLVKR-----HLHKDASAHTLRHTCATYLHEKGVDIATISKFLGHSNVKTTMVYLKISNKVIQRLPIP 789
            ++ K YS +TI  Y+ YL    +  +K    +T  DI+KY+    L++ YS    QNQ++ A+KL  K  +N  N+ IDK+ERP+ +K+LP+VL     +  +  I+NLKH+ +L++++S  LRVSE +N++L DID +RM+I I  GKG KDR+V +S + L+L+ +YY+ Y+P +YLF G+K  KY+  S+  +  +     ++   AS HTLRH+ AT+L E G D+  I + LGHS+ KTT +Y  +S K IQ++  P
Sbjct:   76 MRNKRYSEKTINQYLKYLNELKLNLKKEFIEMTNEDISKYIYTKCLDKSYSF---QNQLVNAIKLMVK--INNLNIIIDKLERPKAKKELPIVLSKEDIQNLLNTIKNLKHKTILSIIYSAGLRVSEAVNLELKDIDSNRMLINIRGGKGKKDRLVMLSPKILELLREYYKIYKPSKYLFEGEKEEKYSVRSIQSIFSKAKKEANIKLKASVHTLRHSYATHLLEAGTDLRYIQELLGHSSSKTTEIYTHVSTKSIQKIKSP 332          
BLAST of mRNA_E-siliculosus-1a_F_contig1165.1075.1 vs. uniprot
Match: A0A524NTI3_9BACT (Integrase n=1 Tax=Bacteroidia bacterium TaxID=2044936 RepID=A0A524NTI3_9BACT)

HSP 1 Score: 188 bits (478), Expect = 8.010e-55
Identity = 106/264 (40.15%), Postives = 165/264 (62.50%), Query Frame = 1
Query:   28 RLKQKNYSPRTIKAYVFYLKRFLMA-QQKSPSHITFGDITKYLLN---QEYSSTSQQNQIIGALKLYAKYMLNRSNLHIDKIERPRREKKLPMVLDGPTTEKNIKAIENLKHRCLLTVLFSGALRVSELLNIKLGDIDRHRMVIKINLGKGAKDRIVPVSQETLKLIEQYYRKYRPVEYLFNGQKSLKYTASSVNKLVKR-----HLHKDASAHTLRHTCATYLHEKGVDIATISKFLGHSNVKTTMVYLKISNKVIQRLPIPM 792
            +L +K YSP TIK YV Y+K F    Q  S   ++   I  Y+LN    +  S SQQNQ I A+K Y + +L R   +   + RP++EKKLP +L     E  +K   NLKH+C+L  L+S  LR SEL+N+K+ DID  RM+I+I+  KG KDR   +S++ +KL+  YY+ Y+P  +LF GQ+  +Y+A+S+  + ++      + K A+ HTLRH+ AT+L E+G+++  I + LGHS++KTT +Y  +S+K + ++  P+
Sbjct:   56 KLIEKRYSPNTIKTYVSYIKSFAEEFQDSSLESVSTQQINNYILNLIRMKGISASQQNQRISAIKFYYEQVLGRKKAYYQ-LSRPKKEKKLPHILTIDEVEHLLKCCRNLKHKCILMTLYSAGLRRSELINLKINDIDSKRMLIRISHSKGNKDRYTLLSEKLVKLLRDYYKIYQPKYWLFEGQRGGQYSATSIENVFRKAMKQARITKYATPHTLRHSFATHLLEQGINLRYIQEILGHSSLKTTEIYTHVSSKQLTKIQNPL 318          
BLAST of mRNA_E-siliculosus-1a_F_contig1165.1075.1 vs. uniprot
Match: A0A6H9I481_9BACT (Integrase n=1 Tax=Chlorobi bacterium TaxID=2268192 RepID=A0A6H9I481_9BACT)

HSP 1 Score: 186 bits (473), Expect = 1.040e-54
Identity = 106/258 (41.09%), Postives = 160/258 (62.02%), Query Frame = 1
Query:   43 NYSPRTIKAYVFYLKRFL-MAQQKSPSHITFGDITKYLLNQ--EYSSTSQQNQIIGALKLYAKYMLNRSNLHIDKIERPRREKKLPMVLDGPTTEKNIKAIENLKHRCLLTVLFSGALRVSELLNIKLGDIDRHRMVIKINLGKGAKDRIVPVSQETLKLIEQYYRKYRPVEYLFNGQKSLKYTASSVNKLVKR-----HLHKDASAHTLRHTCATYLHEKGVDIATISKFLGHSNVKTTMVYLKISNKVIQRLPIPM 792
            NYS  T+K Y  +  +FL     + PS IT  +I +YLL +  +  S S+QNQ I ++K + + +LNR    + +I RP++  +LP V       + + A ENLKH+C+L + ++G LRVSE++N+K+ DID  RM+I I   KG KDRIV +SQ+ L ++ +YY+ Y+P  YLF G    KY+A S+  L+K       + K  S HTLRH+ AT+L E G DI +I K LGH++++TTM+Y  IS + I ++  P+
Sbjct:   12 NYSESTLKNYTNHFSKFLEYFSDRKPSSITKKEIMQYLLEKWNDKLSASEQNQKINSIKFFYEKVLNRPK-EVYEIPRPKKPFQLPGVFSENEVRRILDAAENLKHKCILCLAYAGGLRVSEIINLKISDIDSDRMIIHIKNSKGKKDRIVMLSQKLLIILREYYKSYKPKAYLFEGMNGGKYSARSIQSLLKTIKKRAGVTKRGSVHTLRHSFATHLFEGGTDILSIKKLLGHNSLRTTMIYTHISKEHINKIQSPL 268          
BLAST of mRNA_E-siliculosus-1a_F_contig1165.1075.1 vs. uniprot
Match: UPI001357F362 (tyrosine-type recombinase/integrase n=1 Tax=Sunxiuqinia indica TaxID=2692584 RepID=UPI001357F362)

HSP 1 Score: 184 bits (468), Expect = 5.070e-54
Identity = 106/261 (40.61%), Postives = 158/261 (60.54%), Query Frame = 1
Query:   19 FEKRLKQKNYSPRTIKAYVFYLKRFLM---AQQKSPSHITFGDITKYLLNQEYSSTSQQNQIIGALKLYAKYMLNRSNLHIDKIERPRREKKLPMVLDGPTTEKNIKAIENLKHRCLLTVLFSGALRVSELLNIKLGDIDRHRMVIKINLGKGAKDRIVPVSQETLKLIEQYYRKYRPVEYLFNGQKSLKYTASSVNKLVKRHLHKDASAHTLRHTCATYLHEKGVDIATISKFLGHSNVKTTMVYLKISNKVIQRLPIPM 792
            F K L+ KNYS  TI+ Y   +K FL+        PS +    I ++++  + ++T +Q   + ALKL+ KY + +       IE PR EK LP V+D     K I  I+N+KH+ +L++ FS  LRVSE++N+K+ DID  RM+I I   KG KDRIVP+S   L L+  Y++ +RP  YLFNGQ SLKY+ +S  K+ K+H+ K +  H LRH+  T L E G D+  I K  GH++ KTT +Y  ++NK + ++ +P+
Sbjct:   10 FTKDLEFKNYSKNTIENYASQVKLFLVDFTGIATKPSEVNQQQIKEWIMQAKTTNTCKQR--MSALKLFYKYTIKQPR-KFRGIEYPRSEKHLPQVIDKDLIIKRINQIKNIKHKAILSLAFSVGLRVSEVVNLKIEDIDSTRMIIHIKNAKGRKDRIVPLSMNILNLLRAYFKIHRPKVYLFNGQTSLKYSVTSCQKIFKQHIDKKSHFHILRHSSFTALLETGTDLRIIQKIAGHASSKTTEIYTHVTNKSLSKVTLPI 267          
BLAST of mRNA_E-siliculosus-1a_F_contig1165.1075.1 vs. uniprot
Match: A0A2H0XHS2_9BACT (Integrase n=2 Tax=unclassified Candidatus Stahlbacteria TaxID=2767084 RepID=A0A2H0XHS2_9BACT)

HSP 1 Score: 186 bits (473), Expect = 7.650e-54
Identity = 105/273 (38.46%), Postives = 170/273 (62.27%), Query Frame = 1
Query:    1 MNTLEIFEKRLKQKNYSPRTIKAYVFYLKRFLMAQQKSPSHITFGDITKYLL---NQEYSSTSQQNQIIGALKLYAKYMLNRSNLHIDKIERPRREKKLPMVLDGPTTEKNIKAIENLKHRCLLTVLFSGALRVSELLNIKLGDIDRHRMVIKINLGKGAKDRIVPVSQETLKLIEQYYRKYRPVEYLFNGQKSLKYTA-SSVNKLV-----KRHLHKDASAHTLRHTCATYLHEKGVDIATISKFLGHSNVKTTMVYLKISNKVIQRLPIPM 792
            ++  E   + L  + YS +T+K+Y+++ + FL    K PS I   DI  YLL    +++S+TS  NQ I ALK Y   MLNR  ++  +++RPR++KKLP+VL      K + +++N+KH+ +L +++S  LRV E++ +K  DID  RM+I I   KG KDR   +S++ L+++ QY+RKY+P ++LF G K  +Y +  SV+K+      K  + K+ S HTLRH+ AT+L E G D+  I + LGH++ KTT +Y  +S K + ++  P+
Sbjct:   63 LHNFEDIRRELLSRKYSHKTVKSYIYFNRDFLNFTDKKPSDINDNDIKDYLLYLAEEKHSATSTLNQAINALKFYYGTMLNRKFVY--EVKRPRKDKKLPVVLSKEEVAKILNSVDNVKHKAILMLVYSAGLRVGEVVKLKPVDIDSKRMLIHIRGSKGRKDRYTLLSEKALEILRQYWRKYKPEKWLFGGAKEGRYLSIRSVDKIFRNASDKAGIKKEVSVHTLRHSFATHLLEGGTDLRYIQELLGHAHSKTTEIYTHVSTKSLGKITSPL 333          
BLAST of mRNA_E-siliculosus-1a_F_contig1165.1075.1 vs. uniprot
Match: A0A3P1ATS4_9FLAO (Integrase n=1 Tax=Flavobacterium viscosum TaxID=2488729 RepID=A0A3P1ATS4_9FLAO)

HSP 1 Score: 186 bits (471), Expect = 1.410e-53
Identity = 116/271 (42.80%), Postives = 161/271 (59.41%), Query Frame = 1
Query:   10 LEIFEKRLKQKNYSPRTIKAYVFYLKRFLMAQQKSP-SHITFGDITKYLLNQEYS-----STSQQNQIIGALKLYAKYMLNRSNLHIDKIERPRREKKLPMVLDGPTTEKNIKAIENLKHRCLLTVLFSGALRVSELLNIKLGDIDRHRMVIKINLGKGAKDRIVPVSQETLKLIEQYYRKYRPVEYLFNGQKSLKYTASSVNKLVKRHLHKDA-----SAHTLRHTCATYLHEKGVDIATISKFLGHSNVKTTMVYLKISNKVIQRLPIP 789
            LEIF++ L  K YS  TI  Y   LK FL   +  P  +IT  DI  Y  N EY      S S QNQI+ A+KLY K + N+  + I+ I RP+REKKLP+VL  P   K I +++N+KH+ LL +++S  LR+SE LN++  DID  RM+I I   KG KDR   +S++ L L+ +YY  Y P +YLF GQ   KY+  S   ++K+   K       + HTLRH+ AT+L E G D+  I   LGHS+ KTTM+Y  +SN  ++++  P
Sbjct:   71 LEIFKRYLLSKRYSTNTISTYCDALKSFLFFYKDKPIKNITNEDIIVY--NNEYILKNKLSASYQNQIVNAIKLYFKIVENKK-IQIEDIHRPKREKKLPIVLSKPEIMKVINSLDNMKHKTLLALIYSAGLRISEALNLQPKDIDSVRMLIHIKDAKGKKDRYTLLSEKVLLLLREYYTLYTPKKYLFEGQLGGKYSNRSAQIVLKQTAQKAGILKPITLHTLRHSFATHLLESGTDLRYIQALLGHSSPKTTMIYTHVSNSSLKKIINP 338          
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig1165.1075.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7L8AFC4_9FLAO1.900e-7745.77Tyrosine-type recombinase/integrase n=1 Tax=Polari... [more]
A0A6J5Q1U6_9CAUD2.810e-6744.32Integrase n=1 Tax=uncultured Caudovirales phage Ta... [more]
UPI00115F193B3.130e-6140.54tyrosine-type recombinase/integrase n=1 Tax=Changc... [more]
A0A7C4P9V4_9BACT3.160e-5742.12Recombinase n=1 Tax=Ignavibacteria bacterium TaxID... [more]
A0A7X9BC17_9MOLU5.130e-5640.84Tyrosine-type recombinase/integrase n=1 Tax=Mollic... [more]
A0A524NTI3_9BACT8.010e-5540.15Integrase n=1 Tax=Bacteroidia bacterium TaxID=2044... [more]
A0A6H9I481_9BACT1.040e-5441.09Integrase n=1 Tax=Chlorobi bacterium TaxID=2268192... [more]
UPI001357F3625.070e-5440.61tyrosine-type recombinase/integrase n=1 Tax=Sunxiu... [more]
A0A2H0XHS2_9BACT7.650e-5438.46Integrase n=2 Tax=unclassified Candidatus Stahlbac... [more]
A0A3P1ATS4_9FLAO1.410e-5342.80Integrase n=1 Tax=Flavobacterium viscosum TaxID=24... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_F_contig1165contigE-siliculosus-1a_F_contig1165:20031..20825 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef902022-09-19
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female2021-02-24
Properties
Property NameValue
Start1
Stop1
Cds size795
Model size795
Exons1
Hectar predicted targeting categoryother localisation
BRITEko00000,ko03036
Best eggNOG OGNA|NA|NA
Best tax levelMarinilabiliaceae
COG Functional cat.L
EggNOG OGs2FN75@200643,3XK45@558415,4NGE1@976,COG4974@1,COG4974@2
EggNOG free text desc.Phage integrase, N-terminal SAM-like domain
KEGG koko:K04763
Seed eggNOG ortholog385682.AFSL01000088_gene850
Seed ortholog evalue5.6e-48
Seed ortholog score198.0
Taxonomic scopeBacteria
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927682.4368393-CDS-E-siliculosus-1a_F_contig1165:20030..208251622927682.4368393-CDS-E-siliculosus-1a_F_contig1165:20030..20825Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1165 20031..20825 -
1696318637.1032536-CDS-E-siliculosus-1a_F_contig1165:20030..208251696318637.1032536-CDS-E-siliculosus-1a_F_contig1165:20030..20825Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1165 20031..20825 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_F_contig1165.1075.1prot_E-siliculosus-1a_F_contig1165.1075.1Ectocarpus siliculosus Ec863f_EcPH12_90f femalepolypeptideE-siliculosus-1a_F_contig1165 20031..20825 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E-siliculosus-1a_F_contig1165.1075.1

>prot_E-siliculosus-1a_F_contig1165.1075.1 ID=prot_E-siliculosus-1a_F_contig1165.1075.1|Name=mRNA_E-siliculosus-1a_F_contig1165.1075.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=265bp
MNTLEIFEKRLKQKNYSPRTIKAYVFYLKRFLMAQQKSPSHITFGDITKY
LLNQEYSSTSQQNQIIGALKLYAKYMLNRSNLHIDKIERPRREKKLPMVL
DGPTTEKNIKAIENLKHRCLLTVLFSGALRVSELLNIKLGDIDRHRMVIK
INLGKGAKDRIVPVSQETLKLIEQYYRKYRPVEYLFNGQKSLKYTASSVN
KLVKRHLHKDASAHTLRHTCATYLHEKGVDIATISKFLGHSNVKTTMVYL
KISNKVIQRLPIPM*
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mRNA from alignment at E-siliculosus-1a_F_contig1165:20031..20825-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E-siliculosus-1a_F_contig1165.1075.1 ID=mRNA_E-siliculosus-1a_F_contig1165.1075.1|Name=mRNA_E-siliculosus-1a_F_contig1165.1075.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=795bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1165:20031..20825- (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
ATGAACACCTTAGAAATTTTCGAAAAAAGATTAAAGCAAAAAAACTATTC ACCCAGAACAATAAAGGCTTATGTATTTTACTTAAAACGGTTTTTAATGG CCCAGCAAAAAAGCCCTTCACATATTACATTTGGTGATATAACTAAGTAC TTATTAAATCAAGAATATAGCAGTACATCGCAGCAAAATCAAATTATAGG AGCTTTAAAGTTGTACGCAAAATATATGCTAAATCGTAGTAATTTACATA TAGACAAAATAGAACGCCCCAGGCGCGAAAAAAAGTTACCAATGGTATTA GATGGTCCAACTACGGAGAAAAATATAAAAGCAATTGAAAATCTAAAGCA TCGGTGTTTGTTGACGGTGTTATTTTCTGGTGCGCTACGAGTTAGCGAAC TGCTAAATATTAAATTAGGTGATATTGACCGGCATCGTATGGTCATTAAA ATAAATTTAGGCAAAGGTGCAAAAGACCGAATAGTGCCGGTAAGTCAAGA AACGCTAAAACTTATTGAACAATATTACCGAAAATACAGACCAGTAGAAT ACCTTTTCAACGGCCAAAAATCTTTAAAATATACGGCAAGTAGTGTGAAC AAATTAGTGAAACGTCATTTGCATAAAGATGCTAGTGCGCATACATTACG ACACACCTGTGCAACCTATCTGCATGAAAAAGGGGTAGACATCGCAACCA TATCAAAATTCTTAGGCCATAGTAATGTAAAGACCACAATGGTCTATTTA AAAATTAGTAATAAGGTCATACAACGCCTTCCAATTCCAATGTAA
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Coding sequence (CDS) from alignment at E-siliculosus-1a_F_contig1165:20031..20825-

>mRNA_E-siliculosus-1a_F_contig1165.1075.1 ID=mRNA_E-siliculosus-1a_F_contig1165.1075.1|Name=mRNA_E-siliculosus-1a_F_contig1165.1075.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=1590bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1165:20031..20825- (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
ATGAACACCTTAGAAATTTTCGAAAAAAGATTAAAGCAAAAAAACTATTC
ACCCAGAACAATAAAGGCTTATGTATTTTACTTAAAACGGTTTTTAATGG
CCCAGCAAAAAAGCCCTTCACATATTACATTTGGTGATATAACTAAGTAC
TTATTAAATCAAGAATATAGCAGTACATCGCAGCAAAATCAAATTATAGG
AGCTTTAAAGTTGTACGCAAAATATATGCTAAATCGTAGTAATTTACATA
TAGACAAAATAGAACGCCCCAGGCGCGAAAAAAAGTTACCAATGGTATTA
GATGGTCCAACTACGGAGAAAAATATAAAAGCAATTGAAAATCTAAAGCA
TCGGTGTTTGTTGACGGTGTTATTTTCTGGTGCGCTACGAGTTAGCGAAC
TGCTAAATATTAAATTAGGTGATATTGACCGGCATCGTATGGTCATTAAA
ATAAATTTAGGCAAAGGTGCAAAAGACCGAATAGTGCCGGTAAGTCAAGA
AACGCTAAAACTTATTGAACAATATTACCGAAAATACAGACCAGTAGAAT
ACCTTTTCAACGGCCAAAAATCTTTAAAATATACGGCAAGTAGTGTGAAC
AAATTAGTGAAACGTCATTTGCATAAAGATGCTAGTGCGCATACATTACG
ACACACCTGTGCAACCTATCTGCATGAAAAAGGGGTAGACATCGCAACCA
TATCAAAATTCTTAGGCCATAGTAATGTAAAGACCACAATGGTCTATTTA
AAAATTAGTAATAAGGTCATACAACGCCTTCCAATTCCAATGTAAATGAA
CACCTTAGAAATTTTCGAAAAAAGATTAAAGCAAAAAAACTATTCACCCA
GAACAATAAAGGCTTATGTATTTTACTTAAAACGGTTTTTAATGGCCCAG
CAAAAAAGCCCTTCACATATTACATTTGGTGATATAACTAAGTACTTATT
AAATCAAGAATATAGCAGTACATCGCAGCAAAATCAAATTATAGGAGCTT
TAAAGTTGTACGCAAAATATATGCTAAATCGTAGTAATTTACATATAGAC
AAAATAGAACGCCCCAGGCGCGAAAAAAAGTTACCAATGGTATTAGATGG
TCCAACTACGGAGAAAAATATAAAAGCAATTGAAAATCTAAAGCATCGGT
GTTTGTTGACGGTGTTATTTTCTGGTGCGCTACGAGTTAGCGAACTGCTA
AATATTAAATTAGGTGATATTGACCGGCATCGTATGGTCATTAAAATAAA
TTTAGGCAAAGGTGCAAAAGACCGAATAGTGCCGGTAAGTCAAGAAACGC
TAAAACTTATTGAACAATATTACCGAAAATACAGACCAGTAGAATACCTT
TTCAACGGCCAAAAATCTTTAAAATATACGGCAAGTAGTGTGAACAAATT
AGTGAAACGTCATTTGCATAAAGATGCTAGTGCGCATACATTACGACACA
CCTGTGCAACCTATCTGCATGAAAAAGGGGTAGACATCGCAACCATATCA
AAATTCTTAGGCCATAGTAATGTAAAGACCACAATGGTCTATTTAAAAAT
TAGTAATAAGGTCATACAACGCCTTCCAATTCCAATGTAA
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