mRNA_E-siliculosus-1a_F_contig1165.1072.1 (mRNA) Ectocarpus siliculosus Ec863f_EcPH12_90f female
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Overview
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig1165.1072.1 vs. uniprot
Match: S0A176_9CAUD (Structural protein n=1 Tax=Cellulophaga phage phi39:1 TaxID=1327993 RepID=S0A176_9CAUD) HSP 1 Score: 174 bits (442), Expect = 2.280e-53 Identity = 89/151 (58.94%), Postives = 118/151 (78.15%), Query Frame = 1
Query: 1 NLKVTEVKGFDELNRNLKRLNDRTKRSEILKLQRRLARPVVKAYRQQLPEDSGTLKRSVAVKTVPSRKSGGNPVIAVRPGKSGRNDAFYKFMIVKKGTKLGSRARGSRKGKNNVVTQARNRTLGQIENGLVRTSEEEGAKYIQKQIDRLSR 453
NL + V+GF+ELN LK+L+D KR E+L LQR+LA+P+ KAY LP DSGTL +SVA+KTV ++SGGNPVI+V PGK G+ND +YKFM++KKG+K GS +GSR+G NNVVT RN+TL QI +G+V +SE KY+QK+ID+LS+
Sbjct: 2 NLNIEGVEGFEELNAKLKKLSDSVKRKEVLGLQRQLAKPIQKAYAANLPVDSGTLSKSVAIKTVSIKRSGGNPVISVEPGKRGKNDGYYKFMVIKKGSKPGSIKKGSRRGLNNVVTDGRNKTLKQISSGVVNSSEATVVKYVQKKIDKLSK 152
BLAST of mRNA_E-siliculosus-1a_F_contig1165.1072.1 vs. uniprot
Match: UPI000EF58133 (hypothetical protein n=1 Tax=Mesonia aquimarina TaxID=1504967 RepID=UPI000EF58133) HSP 1 Score: 154 bits (390), Expect = 2.620e-45 Identity = 80/160 (50.00%), Postives = 113/160 (70.62%), Query Frame = 1
Query: 10 VTEVKGFDELNRNLKRLNDRTKRSEILKLQRRLARPVVKAYRQQLPEDS------------GTLKRSVAVKTVPSRKSGGNPVIAVRPGKSGRNDAFYKFMIVKKGTKLGSRARGSRKGKNNVVTQARNRTLGQIENGLVRTSEEEGAKYIQKQIDRLSR 453
V E+KGF+ELNR LK+L+DR R EILK+QR+LA+P+ +AY + LP + GTL +SV+ KTVP+ K GGNP + +RPGK G++DA+Y+FM+VKKGT++GS RGSRKGKN VV +AR+ +E V E++ + IQ++ID+LS+
Sbjct: 5 VVEIKGFNELNRKLKKLDDRVTRKEILKIQRKLAKPLEQAYARNLPVGTRDKRRFGTEYPAGTLSKSVSTKTVPASKVGGNPSVVIRPGKKGKHDAYYRFMVVKKGTRVGSNKRGSRKGKNTVVEKARDAAFSSVEQSAVSKYEQQAERVIQREIDKLSK 164
BLAST of mRNA_E-siliculosus-1a_F_contig1165.1072.1 vs. uniprot
Match: UPI0015BC3EA2 (HK97 gp10 family phage protein n=1 Tax=Galbibacter sp. BG1 TaxID=1170699 RepID=UPI0015BC3EA2) HSP 1 Score: 77.0 bits (188), Expect = 8.020e-15 Identity = 61/174 (35.06%), Postives = 93/174 (53.45%), Query Frame = 1
Query: 10 VTEVKGFDELNRNLKRLNDRTKRSEILKLQRRLARPVVKAYRQQLPEDS-------------GTLKRSVAVKTVPSRKSGGNPVIAVRPGKSGRNDAFY--KFMIVK--------KGTKLGSRARGSRKGK-----NNVVTQARNRTLGQIENGLVRTSEEEGAKYIQKQIDRL 447
+ E+KGF EL + +K+L D+ K+ E++K+ R+ A+ VKA RQ+ P+ S G LK+S+ V+ K NP+I VRP SG+ D FY F+I K ++ G+R+R S K N + +A RT G++ ++++E KYIQK IDRL
Sbjct: 5 IFEIKGFKELEQKIKKLPDKAKKREMVKILRKSAQTTVKAARQEAPQSSRPHYLRGGKKIQPGNLKKSIGVQVARKAK---NPMIVVRPKSSGKYDGFYGRAFVIFGHNVYRAGFKRSRKGNRSRNSLGAKAVIKANPFMNRAYQRTEGKVSQESLKSTE----KYIQKLIDRL 171
BLAST of mRNA_E-siliculosus-1a_F_contig1165.1072.1 vs. uniprot
Match: A0A1B9Y3I1_9FLAO (Uncharacterized protein n=1 Tax=Tenacibaculum soleae TaxID=447689 RepID=A0A1B9Y3I1_9FLAO) HSP 1 Score: 63.2 bits (152), Expect = 1.180e-9 Identity = 57/168 (33.93%), Postives = 85/168 (50.60%), Query Frame = 1
Query: 10 VTEVKGFDELNRNLKRL-NDRTKRSEILKLQRRLARPVVKAYRQQLPEDS------------------GTLKRSVAVKTVPSRKSGGNPVIAVRPGKSGRNDAFYKFMIVKKGTKLGSRARGSRKGKNN-VVTQARNRTLGQIENGLVRTSEEEGAKYIQKQIDRLSR 453
+ E++GF EL LK+L ND+ KR E+LK+ ++A P VKA +Q P GT ++S+ KT+ K NP + V P R D +Y V KGTK K K+N + +A +T G + + +E++ A+YIQKQI+RLS+
Sbjct: 5 LVEIQGFKELQTKLKKLGNDKDKRKEVLKILGKVANPTVKAAKQLAPVSKKTHLQKRKGQRFGTYVTPGTGRKSIGKKTMRRAK---NPTVYVSPRSVKRADGWYLRQFVIKGTK---------KIKSNPFIDKAYQQTKGLVTSD----AEKKVARYIQKQINRLSK 156
BLAST of mRNA_E-siliculosus-1a_F_contig1165.1072.1 vs. uniprot
Match: UPI001EF3763D (hypothetical protein n=1 Tax=Tenacibaculum sp. Mcav3-52 TaxID=2917762 RepID=UPI001EF3763D) HSP 1 Score: 63.2 bits (152), Expect = 1.180e-9 Identity = 54/168 (32.14%), Postives = 85/168 (50.60%), Query Frame = 1
Query: 10 VTEVKGFDELNRNLKRL-NDRTKRSEILKLQRRLARPVVKAYRQQLPEDS------------------GTLKRSVAVKTVPSRKSGGNPVIAVRPGKSGRNDAFYKFMIVKKGTKLGSRARGSRKGKNN-VVTQARNRTLGQIENGLVRTSEEEGAKYIQKQIDRLSR 453
+ E+ GF EL + +K L ND+ K E++K+ ++A P VKA + P GT +RS+ KT+ K NP++ V P + R D +Y V +GTK K K+N + +A +T G G+ + +E++ +KYIQKQI+RLS+
Sbjct: 5 LIEISGFKELEKKIKSLANDKVKNREVVKILNQVANPTVKAAKNLAPVSRKHHVQKRKGQRFGTVISPGTGRRSIGKKTMRKAK---NPMVIVSPRSTRRADGWYLRQFVIRGTK---------KIKSNPFIDKAYEQTKG----GVTKDAEQKVSKYIQKQINRLSK 156
BLAST of mRNA_E-siliculosus-1a_F_contig1165.1072.1 vs. uniprot
Match: A0A2K8V8C9_9FLAO (Uncharacterized protein n=1 Tax=Tenacibaculum sp. SZ-18 TaxID=754423 RepID=A0A2K8V8C9_9FLAO) HSP 1 Score: 61.2 bits (147), Expect = 6.350e-9 Identity = 57/166 (34.34%), Postives = 81/166 (48.80%), Query Frame = 1
Query: 10 VTEVKGFDELNRNLKRL-NDRTKRSEILKLQRRLARPVVKAYRQQLPEDS------------------GTLKRSVAVKTVPSRKSGGNPVIAVRPGKSGRNDAFYKFMIVKKGTKLGSRARGSRKGKNNVVTQARNRTLGQIENGLVRTSEEEGAKYIQKQIDRLS 450
+ E++GF EL R LK L +D+TKR E+ K+ ++A VK + P GT KRS+ KT+ R+S NP++ V P + + D +Y V GTK K K+N R Q + G+ R SE+ AKYIQKQI++LS
Sbjct: 5 IVEIRGFRELQRKLKELGDDKTKRREVTKILGQVANSTVKVAKSLAPVSKKPHVQKRRNQVFGAVISPGTGKRSIGKKTM--RRSL-NPMVIVSPRSTKKADGWYLRQFVIGGTK---------KIKSNPFMD---RAYTQTKGGVARESEQRLAKYIQKQINKLS 155
BLAST of mRNA_E-siliculosus-1a_F_contig1165.1072.1 vs. uniprot
Match: A0A7L8AFD3_9FLAO (Uncharacterized protein n=1 Tax=Polaribacter haliotis TaxID=1888915 RepID=A0A7L8AFD3_9FLAO) HSP 1 Score: 60.5 bits (145), Expect = 1.240e-8 Identity = 54/169 (31.95%), Postives = 81/169 (47.93%), Query Frame = 1
Query: 1 NLKVTEVKGFDELNRNLKRLN-DRTKRSEILKLQRRLARPVVKAYRQQLPEDS------------------GTLKRSVAVKTVPSRKSGGNPVIAVRPGKSGRNDAFYKFMIVKKGTKLGSRARGSRKGKNNVVTQARNRTLGQIENGLVRTSEEEGAKYIQKQIDRLS 450
N + E++GF EL + LK L+ D+ K E+LK+ ++A P VKA + P GT KRS+ KT+ K NP + V P + R D +Y V +GTK N + +A +T GQ+ + +E + AKYIQ+QI++LS
Sbjct: 2 NSNLIEIEGFKELEKKLKSLSSDKVKSREVLKILGQVANPTVKAVKALTPIAKKPHIQKRKGQSFGTVITPGTGKRSIGKKTMRRAK---NPTLYVSPRSTKRADGWYLRQFVIRGTKYQKA--------NPFIDKAYQQTQGQV----TKDAETKVAKYIQRQIEKLS 155 The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig1165.1072.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90) Total hits: 7
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-siliculosus-1a_F_contig1165.1072.1 >prot_E-siliculosus-1a_F_contig1165.1072.1 ID=prot_E-siliculosus-1a_F_contig1165.1072.1|Name=mRNA_E-siliculosus-1a_F_contig1165.1072.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=152bp NLKVTEVKGFDELNRNLKRLNDRTKRSEILKLQRRLARPVVKAYRQQLPEback to top mRNA from alignment at E-siliculosus-1a_F_contig1165:14972..15427- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-siliculosus-1a_F_contig1165.1072.1 ID=mRNA_E-siliculosus-1a_F_contig1165.1072.1|Name=mRNA_E-siliculosus-1a_F_contig1165.1072.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=456bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1165:14972..15427- (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top Coding sequence (CDS) from alignment at E-siliculosus-1a_F_contig1165:14972..15427- >mRNA_E-siliculosus-1a_F_contig1165.1072.1 ID=mRNA_E-siliculosus-1a_F_contig1165.1072.1|Name=mRNA_E-siliculosus-1a_F_contig1165.1072.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=912bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1165:14972..15427- (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top |