mRNA_E-siliculosus-1a_F_contig1159.1036.1 (mRNA) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E-siliculosus-1a_F_contig1159.1036.1
Unique NamemRNA_E-siliculosus-1a_F_contig1159.1036.1
TypemRNA
OrganismEctocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Homology
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BLAST of mRNA_E-siliculosus-1a_F_contig1159.1036.1 vs. uniprot
Match: A0A6H5JJU9_9PHAE (Origin recognition complex subunit 4 n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJU9_9PHAE)

HSP 1 Score: 400 bits (1027), Expect = 7.080e-134
Identity = 265/313 (84.66%), Postives = 269/313 (85.94%), Query Frame = 1 
Query:    1 MCDDNSMRYCKAFLRRRLAYGPQVSKRERAASHPDGEEQGASAWGHLWPLGRHTQCEELRRVLRRTIFDRQSQSALLLGNTGTGKSLVLDSVLRSLAQEASSLAKAKGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRQPFRAVYLNGAAQENDGVAMREIVQQLGITGAATQGSVYTSNLAMMVDSMKTGAVNGVPVVFVLDEFERFACRKPQTLLYALLDLCQDKTICAAVVGLSVNLNVLDVAEKRVKSRFSFRQV 939
            MCDDNSMRYCKAFLRRRLAYGP+ SKRERAASHPDGEEQGASA  HLWPLGRHTQCEELRRVLRRTIFDRQSQSALLLGNTGTGKSLVLDSVLRSLAQEASSL KAKG                                        XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRQPFRAVYLNGAAQENDGVAMREIVQQLGITGAATQGSVYTSNLAMMVDSMKTGAVNGVPV+F+LDEFERFACRKPQTLLYALLDLCQDKTICAAVVGLSVNLNVLDVAEKRVKSRFSFRQ+
Sbjct:    1 MCDDNSMRYCKAFLRRRLAYGPRGSKRERAASHPDGEEQGASAREHLWPLGRHTQCEELRRVLRRTIFDRQSQSALLLGNTGTGKSLVLDSVLRSLAQEASSLEKAKGA-----------------------------------TAAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRQPFRAVYLNGAAQENDGVAMREIVQQLGITGAATQGSVYTSNLAMMVDSMKTGAVNGVPVIFILDEFERFACRKPQTLLYALLDLCQDKTICAAVVGLSVNLNVLDVAEKRVKSRFSFRQI 278
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BLAST of mRNA_E-siliculosus-1a_F_contig1159.1036.1 vs. uniprot
Match: D7G0P2_ECTSI (Origin recognition complex subunit 4 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0P2_ECTSI)

HSP 1 Score: 323 bits (829), Expect = 1.510e-104
Identity = 209/313 (66.77%), Postives = 212/313 (67.73%), Query Frame = 1 
Query:    1 MCDDNSMRYCKAFLRRRLAYGPQVSKRERAASHPDGEEQGASAWGHLWPLGRHTQCEELRRVLRRTIFDRQSQSALLLGNTGTGKSLVLDSVLRSLAQEASSLAKAKGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRQPFRAVYLNGAAQENDGVAMREIVQQLGITGAATQGSVYTSNLAMMVDSMKTGAVNGVPVVFVLDEFERFACRKPQTLLYALLDLCQDKTICAAVVGLSVNLNVLDVAEKRVKSRFSFRQV 939
            MCDDNSMR+CKAFLRRRLAYGPQVSKRERAASHPDGEEQGASAWGHLWP GRHTQCEELRRVLRRTIFDRQSQSALLLGNTGTGKSLVLDSVLRSLAQEASSLAKAKG  XXXXXXXXXXXXXXXX       XX X       VE                                                                         G  G     S +  NLAMMVDSMKTGAVNGVPVVFVLDEFERFACRKPQTLLYALLDLCQDKTICAAVVGLSVNLNVLDVAEKRVKSRFSFRQ+
Sbjct:    1 MCDDNSMRHCKAFLRRRLAYGPQVSKRERAASHPDGEEQGASAWGHLWPSGRHTQCEELRRVLRRTIFDRQSQSALLLGNTGTGKSLVLDSVLRSLAQEASSLAKAKGATXXXXXXXXXXXXXXXXSPAAGEGXXTXGSGGVSSVEG------------------------------------------------------------------------GSAGQPASSSPHR-NLAMMVDSMKTGAVNGVPVVFVLDEFERFACRKPQTLLYALLDLCQDKTICAAVVGLSVNLNVLDVAEKRVKSRFSFRQI 240
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BLAST of mRNA_E-siliculosus-1a_F_contig1159.1036.1 vs. uniprot
Match: A0A8J6EX04_ELECQ (Uncharacterized protein n=1 Tax=Eleutherodactylus coqui TaxID=57060 RepID=A0A8J6EX04_ELECQ)

HSP 1 Score: 100 bits (250), Expect = 3.350e-21
Identity = 55/120 (45.83%), Postives = 80/120 (66.67%), Query Frame = 1 
Query:  592 VYLNGAAQENDGVAMREIVQQL---GITGAATQGSVYTSNLAMMVDSMKTG-AVNGVPVVFVLDEFERFACRKPQTLLYALLDLCQDKTICAAVVGLSVNLNVLDVAEKRVKSRFSFRQV 939
            V+LNG  Q ND +A++EI +QL    + G    GS +  NLA +++++KTG   +  PV+F+LDEF+ FA  K QTLLY L D+ Q      AV+GL+  L+++++ EKRVKSRFS RQ+
Sbjct:   17 VHLNGLLQTNDRIALKEITRQLQLENVVGDRVFGS-FAENLAFLLEALKTGDRASSCPVIFLLDEFDLFAHHKNQTLLYNLFDVAQSAQAPVAVIGLTCRLDIMELLEKRVKSRFSHRQI 135
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BLAST of mRNA_E-siliculosus-1a_F_contig1159.1036.1 vs. uniprot
Match: UPI0014259855 (origin recognition complex subunit 4-like n=1 Tax=Anneissia japonica TaxID=1529436 RepID=UPI0014259855)

HSP 1 Score: 103 bits (257), Expect = 3.660e-21
Identity = 54/119 (45.38%), Postives = 80/119 (67.23%), Query Frame = 1 
Query:  592 VYLNGAAQENDGVAMREIVQQLG---ITGAATQGSVYTSNLAMMVDSMKTGAVNGVPVVFVLDEFERFACRKPQTLLYALLDLCQDKTICAAVVGLSVNLNVLDVAEKRVKSRFSFRQV 939
            V+LNG  Q +D +A++EI +QL    + G    GS +  NLA +++++KTG+    PV+F+LDEF+ FA  + QTLLY L D+CQ       V+GL+  L+V+++ EKRVKSRFS RQ+
Sbjct:  135 VHLNGLLQTDDRIALKEITRQLNLDNVVGDKVFGS-FAENLAFLLEALKTGSKESKPVLFILDEFDLFAHHRNQTLLYNLFDICQSAQTPIVVIGLTCRLDVVELLEKRVKSRFSHRQI 252
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BLAST of mRNA_E-siliculosus-1a_F_contig1159.1036.1 vs. uniprot
Match: A0A6P8R590_GEOSA (Origin recognition complex subunit 4 n=2 Tax=Geotrypetes seraphini TaxID=260995 RepID=A0A6P8R590_GEOSA)

HSP 1 Score: 103 bits (256), Expect = 3.800e-21
Identity = 59/120 (49.17%), Postives = 79/120 (65.83%), Query Frame = 1 
Query:  592 VYLNGAAQENDGVAMREIVQQL---GITGAATQGSVYTSNLAMMVDSMKTG-AVNGVPVVFVLDEFERFACRKPQTLLYALLDLCQDKTICAAVVGLSVNLNVLDVAEKRVKSRFSFRQV 939
            V+LNG  Q ND +A++EI +QL    + G    GS +  NLA +++++K G   N  PV+FVLDEF+ FA  K QTLLY L D+ Q      AV+GLS  L+VL++ EKRVKSRFS RQ+
Sbjct:   97 VHLNGLLQTNDNIALKEITRQLQLENVVGDKVFGS-FAENLAFLLEALKKGNRTNSCPVLFVLDEFDLFAHHKNQTLLYNLFDISQAAQTPVAVIGLSCRLDVLELLEKRVKSRFSHRQI 215
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BLAST of mRNA_E-siliculosus-1a_F_contig1159.1036.1 vs. uniprot
Match: A0A8J6K366_ELECQ (Uncharacterized protein n=1 Tax=Eleutherodactylus coqui TaxID=57060 RepID=A0A8J6K366_ELECQ)

HSP 1 Score: 100 bits (250), Expect = 7.240e-21
Identity = 55/120 (45.83%), Postives = 80/120 (66.67%), Query Frame = 1 
Query:  592 VYLNGAAQENDGVAMREIVQQL---GITGAATQGSVYTSNLAMMVDSMKTG-AVNGVPVVFVLDEFERFACRKPQTLLYALLDLCQDKTICAAVVGLSVNLNVLDVAEKRVKSRFSFRQV 939
            V+LNG  Q ND +A++EI +QL    + G    GS +  NLA +++++KTG   +  PV+F+LDEF+ FA  K QTLLY L D+ Q      AV+GL+  L+++++ EKRVKSRFS RQ+
Sbjct:   17 VHLNGLLQTNDRIALKEITRQLQLENVVGDRVFGS-FAENLAFLLEALKTGDRASSCPVIFLLDEFDLFAHHKNQTLLYNLFDVAQSAQAPVAVIGLTCRLDIMELLEKRVKSRFSHRQI 135
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BLAST of mRNA_E-siliculosus-1a_F_contig1159.1036.1 vs. uniprot
Match: UPI0010A914B3 (origin recognition complex subunit 4 isoform X2 n=4 Tax=Monotremata TaxID=9255 RepID=UPI0010A914B3)

HSP 1 Score: 100 bits (250), Expect = 1.310e-20
Identity = 57/126 (45.24%), Postives = 81/126 (64.29%), Query Frame = 1 
Query:  574 RQPFRAVYLNGAAQENDGVAMREIVQQL---GITGAATQGSVYTSNLAMMVDSMKTG-AVNGVPVVFVLDEFERFACRKPQTLLYALLDLCQDKTICAAVVGLSVNLNVLDVAEKRVKSRFSFRQV 939
            R+    V+LNG  Q ND +A++EI +QL    + G    GS +  NLA +++++K G      PV+F+LDEF+ FA  K QTLLY LLD+ Q      AV+GL+  L++L++ EKRVKSRFS RQ+
Sbjct:   24 RENVLQVHLNGLLQTNDRIALKEITRQLQLENVVGDRVFGS-FAENLAFLLEALKRGDRARSCPVLFILDEFDLFAHHKNQTLLYNLLDISQSAQTPVAVIGLTCRLDILELLEKRVKSRFSHRQI 148
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BLAST of mRNA_E-siliculosus-1a_F_contig1159.1036.1 vs. uniprot
Match: UPI0005F47EE2 (origin recognition complex subunit 4 n=1 Tax=Cercocebus atys TaxID=9531 RepID=UPI0005F47EE2)

HSP 1 Score: 97.8 bits (242), Expect = 2.970e-20
Identity = 54/120 (45.00%), Postives = 79/120 (65.83%), Query Frame = 1 
Query:  592 VYLNGAAQENDGVAMREIVQQLG---ITGAATQGSVYTSNLAMMVDSMKTG-AVNGVPVVFVLDEFERFACRKPQTLLYALLDLCQDKTICAAVVGLSVNLNVLDVAEKRVKSRFSFRQV 939
            V+LNG  Q ND +A++EI +QL    + G    GS +  NL+ +++++K G   +  PV+F+LDEF+ FA  K QTLLY L D+ Q      AV+GL+  L++L++ EKRVKSRFS RQ+
Sbjct:   97 VHLNGLLQINDKIALKEITRQLNLENVVGDKVFGS-FAENLSFLLEALKKGDRTSSCPVIFILDEFDLFAHHKNQTLLYNLFDISQSAQTPIAVIGLTCRLDILELLEKRVKSRFSHRQI 215
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BLAST of mRNA_E-siliculosus-1a_F_contig1159.1036.1 vs. uniprot
Match: A0A061HY19_CRIGR (Origin recognition complex subunit 4 n=1 Tax=Cricetulus griseus TaxID=10029 RepID=A0A061HY19_CRIGR)

HSP 1 Score: 99.4 bits (246), Expect = 3.250e-20
Identity = 55/120 (45.83%), Postives = 79/120 (65.83%), Query Frame = 1 
Query:  592 VYLNGAAQENDGVAMREIVQQLG---ITGAATQGSVYTSNLAMMVDSMKTG-AVNGVPVVFVLDEFERFACRKPQTLLYALLDLCQDKTICAAVVGLSVNLNVLDVAEKRVKSRFSFRQV 939
            V+LNG  Q ND +A+ EI +QL    + G    GS +  NL+ +++++K G   N  PV+F+LDEF+ FA +K QTLLY L D+ Q      AV+GL+  L++L++ EKRVKSRFS RQ+
Sbjct:  114 VHLNGLMQINDKIALTEITRQLNLENVVGDKVFGS-FAENLSFLLEALKKGNRANSCPVIFILDEFDLFAHQKNQTLLYNLFDISQSAQTPVAVIGLTCRLDILELLEKRVKSRFSHRQI 232
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BLAST of mRNA_E-siliculosus-1a_F_contig1159.1036.1 vs. uniprot
Match: A0A401S1N2_CHIPU (Origin recognition complex subunit 4 n=6 Tax=Orectolobiformes TaxID=30503 RepID=A0A401S1N2_CHIPU)

HSP 1 Score: 100 bits (248), Expect = 3.870e-20
Identity = 58/120 (48.33%), Postives = 80/120 (66.67%), Query Frame = 1 
Query:  592 VYLNGAAQENDGVAMREIVQQL---GITGAATQGSVYTSNLAMMVDSMKTG-AVNGVPVVFVLDEFERFACRKPQTLLYALLDLCQDKTICAAVVGLSVNLNVLDVAEKRVKSRFSFRQV 939
            V+LNG  Q +D +A++EI +QL    + G    GS +  NLA +++++K G   N  PV+F+LDEF+ FA  K QTLLY LLD+ Q      AVVGL+  L+VL++ EKRVKSRFS RQ+
Sbjct:   75 VHLNGLLQTDDKIALKEITRQLQLENVVGDKVFGS-FAENLAFLLEALKKGNRSNSRPVLFILDEFDLFAHHKNQTLLYNLLDVAQSAQTPVAVVGLTCRLDVLELLEKRVKSRFSHRQI 193
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig1159.1036.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JJU9_9PHAE7.080e-13484.66Origin recognition complex subunit 4 n=1 Tax=Ectoc... [more]
D7G0P2_ECTSI1.510e-10466.77Origin recognition complex subunit 4 n=1 Tax=Ectoc... [more]
A0A8J6EX04_ELECQ3.350e-2145.83Uncharacterized protein n=1 Tax=Eleutherodactylus ... [more]
UPI00142598553.660e-2145.38origin recognition complex subunit 4-like n=1 Tax=... [more]
A0A6P8R590_GEOSA3.800e-2149.17Origin recognition complex subunit 4 n=2 Tax=Geotr... [more]
A0A8J6K366_ELECQ7.240e-2145.83Uncharacterized protein n=1 Tax=Eleutherodactylus ... [more]
UPI0010A914B31.310e-2045.24origin recognition complex subunit 4 isoform X2 n=... [more]
UPI0005F47EE22.970e-2045.00origin recognition complex subunit 4 n=1 Tax=Cerco... [more]
A0A061HY19_CRIGR3.250e-2045.83Origin recognition complex subunit 4 n=1 Tax=Crice... [more]
A0A401S1N2_CHIPU3.870e-2048.33Origin recognition complex subunit 4 n=6 Tax=Orect... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_F_contig1159contigE-siliculosus-1a_F_contig1159:33401..36583 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef902022-09-19
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female2021-02-24
Properties
Property NameValue
Start1
Stop0
Cds size939
Model size939
Exons4
Hectar predicted targeting categoryother localisation
BRITEko00000,ko00001,ko00002,ko03032
Best eggNOG OGNA|NA|NA
Best tax levelEukaryota
COG Functional cat.K
EggNOG OGsKOG2228@1,KOG2228@2759
EggNOG free text desc.DNA replication origin binding
GOsGO:0000082,GO:0000166,GO:0000228,GO:0000278,GO:0000785,GO:0000790,GO:0000808,GO:0003674,GO:0003676,GO:0003677,GO:0003688,GO:0003690,GO:0003824,GO:0005488,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005656,GO:0005657,GO:0005664,GO:0005694,GO:0005730,GO:0005737,GO:0005829,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006265,GO:0006267,GO:0006270,GO:0006325,GO:0006342,GO:0006355,GO:0006725,GO:0006807,GO:0006996,GO:0007049,GO:0008144,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009743,GO:0009744,GO:0009889,GO:0009890,GO:0009892,GO:0009987,GO:0010033,GO:0010468,GO:0010556,GO:0010558,GO:0010605,GO:0010629,GO:0016043,GO:0016458,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017076,GO:0017111,GO:0019219,GO:0019222,GO:0022402,GO:0022607,GO:0030466,GO:0030554,GO:0031261,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0031974,GO:0031981,GO:0032553,GO:0032555,GO:0032559,GO:0032991,GO:0032993,GO:0033260,GO:0034285,GO:0034622,GO:0034641,GO:0034645,GO:0035639,GO:0036094,GO:0036387,GO:0036388,GO:0040029,GO:0042221,GO:0043167,GO:0043168,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043388,GO:0043565,GO:0043596,GO:0043933,GO:0044085,GO:0044093,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044422,GO:0044424,GO:0044427,GO:0044428,GO:0044444,GO:0044446,GO:0044451,GO:0044454,GO:0044464,GO:0044770,GO:0044772,GO:0044786,GO:0044843,GO:0045814,GO:0045892,GO:0045934,GO:0046483,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0050896,GO:0051098,GO:0051099,GO:0051101,GO:0051171,GO:0051172,GO:0051252,GO:0051253,GO:0051276,GO:0060255,GO:0065003,GO:0065004,GO:0065007,GO:0065009,GO:0070013,GO:0071103,GO:0071704,GO:0071824,GO:0071840,GO:0080090,GO:0090304,GO:0097159,GO:0097367,GO:1901265,GO:1901360,GO:1901363,GO:1901576,GO:1901700,GO:1902292,GO:1902299,GO:1902315,GO:1902595,GO:1902597,GO:1902679,GO:1902969,GO:1902975,GO:1903047,GO:1903506,GO:1903507,GO:1990837,GO:2000112,GO:2000113,GO:2001141
KEGG ModuleM00284
KEGG Pathwayko04110,ko04111,ko04113,map04110,map04111,map04113
KEGG koko:K02606
Preferred nameORC4
Seed eggNOG ortholog2880.D7G0P2
Seed ortholog evalue4.7e-86
Seed ortholog score324.7
Taxonomic scopeEukaryota
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_F_contig1159.1036.1prot_E-siliculosus-1a_F_contig1159.1036.1Ectocarpus siliculosus Ec863f_EcPH12_90f femalepolypeptideE-siliculosus-1a_F_contig1159 33401..36583 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927672.965978-CDS-E-siliculosus-1a_F_contig1159:33400..335831622927672.965978-CDS-E-siliculosus-1a_F_contig1159:33400..33583Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1159 33401..33583 +
1696318633.9312787-CDS-E-siliculosus-1a_F_contig1159:33400..335831696318633.9312787-CDS-E-siliculosus-1a_F_contig1159:33400..33583Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1159 33401..33583 +
1622927672.9798408-CDS-E-siliculosus-1a_F_contig1159:34596..351111622927672.9798408-CDS-E-siliculosus-1a_F_contig1159:34596..35111Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1159 34597..35111 +
1696318633.9425251-CDS-E-siliculosus-1a_F_contig1159:34596..351111696318633.9425251-CDS-E-siliculosus-1a_F_contig1159:34596..35111Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1159 34597..35111 +
1622927672.990896-CDS-E-siliculosus-1a_F_contig1159:35501..356401622927672.990896-CDS-E-siliculosus-1a_F_contig1159:35501..35640Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1159 35502..35640 +
1696318633.9507737-CDS-E-siliculosus-1a_F_contig1159:35501..356401696318633.9507737-CDS-E-siliculosus-1a_F_contig1159:35501..35640Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1159 35502..35640 +
1622927673.002289-CDS-E-siliculosus-1a_F_contig1159:36481..365831622927673.002289-CDS-E-siliculosus-1a_F_contig1159:36481..36583Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1159 36482..36583 +
1696318633.9589152-CDS-E-siliculosus-1a_F_contig1159:36481..365831696318633.9589152-CDS-E-siliculosus-1a_F_contig1159:36481..36583Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1159 36482..36583 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E-siliculosus-1a_F_contig1159.1036.1

>prot_E-siliculosus-1a_F_contig1159.1036.1 ID=prot_E-siliculosus-1a_F_contig1159.1036.1|Name=mRNA_E-siliculosus-1a_F_contig1159.1036.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=313bp
MCDDNSMRYCKAFLRRRLAYGPQVSKRERAASHPDGEEQGASAWGHLWPL
GRHTQCEELRRVLRRTIFDRQSQSALLLGNTGTGKSLVLDSVLRSLAQEA
SSLAKAKGATAAASAGHGKRKRQKKNSPAAGEGEGTGGSGGASSVEGGGA
VQPAPSSPHRHEEEEEEEEEEEQAERRQQHKQQQQRQQQQQRQPFRAVYL
NGAAQENDGVAMREIVQQLGITGAATQGSVYTSNLAMMVDSMKTGAVNGV
PVVFVLDEFERFACRKPQTLLYALLDLCQDKTICAAVVGLSVNLNVLDVA
EKRVKSRFSFRQV
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mRNA from alignment at E-siliculosus-1a_F_contig1159:33401..36583+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E-siliculosus-1a_F_contig1159.1036.1 ID=mRNA_E-siliculosus-1a_F_contig1159.1036.1|Name=mRNA_E-siliculosus-1a_F_contig1159.1036.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=3183bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1159:33401..36583+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
ATGTGCGATGATAATTCCATGCGGTACTGCAAAGCCTTCCTGCGACGTCG
GTTGGCCTACGGCCCCCAAGTTTCGAAGCGGGAACGAGCCGCCTCGCACC
CGGACGGAGAGGAGCAAGGCGCGTCTGCGTGGGGGCACTTGTGGCCGTTG
GGGCGCCACACGCAGTGCGAAGAGTTGAGGAGGGTGAGAGATAAAGCAGC
GTGCATCCTTGTTAGTGGGTTCGTGGGTGTTTTGGTGTGTCGCTCGTTGG
CAACTGCTGTCTTCGAAATTGTTTTCAAAATTCAAATTAGACTGCCTTTG
TACGAAGAGTAGAGGGCAATTTGCGCGCGCACGGTTTGACCAGCGTCTAC
GCTGGAAGCTGCAAGGGATATAACAGCAGGGTACCCGGGAGCGAGAGCTA
AACCTTGCGACAAGCTGCTATCTAGAAGGTTCCATATCCTACTTTCGTGT
GCAGGTGTGGTTGATTTGATTGCCCGGGAGCGAGAGCTAAACCTTGCGAC
AAGCTGCTTTCTAGAAGGTTCCAGATCCTACTTTCGTGTGCAGGTGTGGT
TGATTTGATTGCAAGCCGTGCCGCGTGATGTACACGTTCCCACAGAGACA
ACTATTGTAGGGCAGCTGGAGATTTCTCAATTAACGTCGCCTCGCCAGAC
ATGCGTTCTGCTGTATGTAGTCTACACCCGACAGGTTTTTTGCACATGCT
GCTCTCTGTTGAGTACGCACGGCCCTGCTGTGCTTCCGCTCATACACGGG
TGGACAGGGGAGCTCGAACGATAGGATGACTGCTGTTGTTCTATCTGCCC
TACATGTATCGTAGGTTACACAAGATACCTATCTATGAACCCCCGGACCG
ATTTTCAAAGCTCGTTTACTCGGCAGCCAAAACAGTGAAAGTGTAGGAAA
GTGTAGGTCTAAGGTCTATAGTAAAGCGTACCCGACCGCTTATGAGAAAC
GTCTATTTCTTGATGAGTTCCAGTTTCTTTTTTCGTCGCCATGGTTTGAT
CATTCACTATATACCTTGGGTCTAGCTCAGGGTCCACTGCTGAGCTGTAT
TGACCCTTCTTTTCATGTTTTTTTGGTTGCAGACTGAGCCTAGTTTTCTC
AACAGATTTTCTCTAAAGAGTGAGCTATGCCTGTACCCCAACACAATAGT
AACGTGAGCATACCATTTTTTCTCTCTCTCTCTTTCGTTTTTCCAGGTGC
TCCGGCGAACGATCTTCGACCGCCAGAGCCAGAGCGCCCTCCTTCTCGGC
AACACCGGCACGGGCAAGTCTCTGGTCCTCGATAGCGTGCTCCGCAGCCT
GGCACAGGAAGCTTCATCCCTCGCGAAAGCGAAGGGTGCGACCGCAGCAG
CGTCGGCGGGGCACGGGAAGCGAAAGAGGCAGAAGAAGAATTCCCCGGCG
GCAGGGGAGGGGGAAGGAACGGGCGGGTCGGGAGGTGCTTCGTCTGTGGA
AGGTGGGGGGGCTGTGCAACCCGCGCCTTCGTCGCCTCATCGGCACGAGG
AGGAGGAGGAGGAGGAGGAAGAGGAGGAGCAGGCAGAAAGACGGCAACAG
CACAAACAGCAGCAGCAGCGGCAGCAGCAGCAGCAGCGGCAGCCTTTTCG
CGCGGTGTATCTGAACGGAGCGGCGCAGGAGAACGACGGCGTGGCCATGA
GGGAAATCGTACAGCAGCTCGGCATCACGGGGGCTGCCACGCAAGGCTCC
GTGTACACCAGGTACTGAACATTCATCGTTTCTCTTTTATTGGTCGCCGC
CGCTTTTGACTGCGCGTTCAAGGCGACGATTCCCAAAAGTTGGATGCTTG
GGTGCTACATCTTCTTCGCTTCGGACCACTACTGTCCCAGTGCATTTCTT
ACCCCCTGTGGGCCTTTCTTGGGGACTTGCTCTATGTCTCCTCCTTTTGC
AGTATATGTCGTGCTTTCAGCTCTCTTTGTTCCAGGAAGATCGGCCGCAG
CTGGTTGCACCAAGCCGTCTCACGTTCCCCCTCCACCTCTCCCTTGCTTT
CCCGTTCCCTTCTTCGCCCTATGCCCCCCCCCCCCCCCCCCCCCCCCGCG
CGCGCTCTCGCTACCCCTGCCCCCGGCTTGTTCTCGACCCCCGTTTGACA
GCAACCTCGCGATGATGGTAGACTCGATGAAGACGGGAGCAGTTAACGGA
GTGCCCGTGGTCTTCGTTCTAGATGAGTTCGAGCGTTTCGCCTGCCGGAA
GCCTCAGACGCTGCTCTACGCCTTGCTCGACCTGTGTCAGGTAGGTTCGC
TGAGGATGTCCCGCCGCAGTTCGTAGTTGGTTGCTGCTGGTGCTCGGCCG
ATGATGCCGTTCGTGCTGCTGCTCGCTTCGGTGTATGAAGTGGTGGAGCG
TACGCTCTCGCTGCTTCTACATTTCCATCGTATTTTTCATCTTCACAGAG
CCAGCGCACGAGTGAGGTTACTCACACGTGCTTTTTTTAGATTCGGCGGC
GGCGGTTGTCGTTACTCTTTGGCCATTCTTAGCTGACGTCGGTTGGTACA
TACGCCCGTGCGTCTTGTTTTTGTTTGAATTCCTGGTGAAATTGGACCGG
TAATCGGTATAGTAGAGTCTCCTTGGTGGCCCTTTTTTGCCGCGCGCACA
GCTGGATCGTGGGACTCCCGTGTGTTTCTGTTTAGTTTATCGTCGCACCC
CACCTTTCCCCCAGTTTCGTTTTTTGCCCAAGAAGACACGACCCTTTGGG
CGGCAACCAGTCTCGGTTAGGTCGACCGCGCCTTCGATGGCGCCATCTAT
TCCACTCAAAATGATCTACACTCAAATGTCGTCATGATTTGTTTTATACC
GTTCGTTAGCAGACCGCCTCGCCTTTTAATACGACGACTTTTTCCCCCAC
AACACCCCATCAGGATACGACCCCCTCCCGTTCACATATAATGAACATTC
CTCCCCGCAACAGGATAAGACCCCCCGCCCCCGCTTTTCGTAAGACGAAG
ATAGCTCCCCAGGATAAGACTTCCTCCCATTTACACAAGACGGATATTCT
CCCCACAACGCCCCATCGAGATAAGACCCCTTCCCCTTTACATTAGACAG
ACTTTCTCCCCCCACGATACCCCACCACCAGGATAAGACCATTTGCGCGG
CTGTGGTTGGCCTTTCGGTCAACCTGAACGTCCTGGACGTGGCAGAGAAG
AGAGTCAAGTCCAGATTCTCCTTCCGGCAGGTC
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Coding sequence (CDS) from alignment at E-siliculosus-1a_F_contig1159:33401..36583+

>mRNA_E-siliculosus-1a_F_contig1159.1036.1 ID=mRNA_E-siliculosus-1a_F_contig1159.1036.1|Name=mRNA_E-siliculosus-1a_F_contig1159.1036.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=1878bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1159:33401..36583+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
ATGTGCGATGATAATTCCATGCGGTACTGCAAAGCCTTCCTGCGACGTCG
GTTGGCCTACGGCCCCCAAGTTTCGAAGCGGGAACGAGCCGCCTCGCACC
CGGACGGAGAGGAGCAAGGCGCGTCTGCGTGGGGGCACTTGTGGCCGTTG
GGGCGCCACACGCAGTGCGAAGAGTTGAGGAGGATGTGCGATGATAATTC
CATGCGGTACTGCAAAGCCTTCCTGCGACGTCGGTTGGCCTACGGCCCCC
AAGTTTCGAAGCGGGAACGAGCCGCCTCGCACCCGGACGGAGAGGAGCAA
GGCGCGTCTGCGTGGGGGCACTTGTGGCCGTTGGGGCGCCACACGCAGTG
CGAAGAGTTGAGGAGGGTGCTCCGGCGAACGATCTTCGACCGCCAGAGCC
AGAGCGCCCTCCTTCTCGGCAACACCGGCACGGGCAAGTCTCTGGTCCTC
GATAGCGTGCTCCGCAGCCTGGCACAGGAAGCTTCATCCCTCGCGAAAGC
GAAGGGTGCGACCGCAGCAGCGTCGGCGGGGCACGGGAAGCGAAAGAGGC
AGAAGAAGAATTCCCCGGCGGCAGGGGAGGGGGAAGGAACGGGCGGGTCG
GGAGGTGCTTCGTCTGTGGAAGGTGGGGGGGCTGTGCAACCCGCGCCTTC
GTCGCCTCATCGGCACGAGGAGGAGGAGGAGGAGGAGGAAGAGGAGGAGC
AGGCAGAAAGACGGCAACAGCACAAACAGCAGCAGCAGCGGCAGCAGCAG
CAGCAGCGGCAGCCTTTTCGCGCGGTGTATCTGAACGGAGCGGCGCAGGA
GAACGACGGCGTGGCCATGAGGGAAATCGTACAGCAGCTCGGCATCACGG
GGGCTGCCACGCAAGGCTCCGTGTACACCAGGTGCTCCGGCGAACGATCT
TCGACCGCCAGAGCCAGAGCGCCCTCCTTCTCGGCAACACCGGCACGGGC
AAGTCTCTGGTCCTCGATAGCGTGCTCCGCAGCCTGGCACAGGAAGCTTC
ATCCCTCGCGAAAGCGAAGGGTGCGACCGCAGCAGCGTCGGCGGGGCACG
GGAAGCGAAAGAGGCAGAAGAAGAATTCCCCGGCGGCAGGGGAGGGGGAA
GGAACGGGCGGGTCGGGAGGTGCTTCGTCTGTGGAAGGTGGGGGGGCTGT
GCAACCCGCGCCTTCGTCGCCTCATCGGCACGAGGAGGAGGAGGAGGAGG
AGGAAGAGGAGGAGCAGGCAGAAAGACGGCAACAGCACAAACAGCAGCAG
CAGCGGCAGCAGCAGCAGCAGCGGCAGCCTTTTCGCGCGGTGTATCTGAA
CGGAGCGGCGCAGGAGAACGACGGCGTGGCCATGAGGGAAATCGTACAGC
AGCTCGGCATCACGGGGGCTGCCACGCAAGGCTCCGTGTACACCAGCAAC
CTCGCGATGATGGTAGACTCGATGAAGACGGGAGCAGTTAACGGAGTGCC
CGTGGTCTTCGTTCTAGATGAGTTCGAGCGTTTCGCCTGCCGGAAGCCTC
AGACGCTGCTCTACGCCTTGCTCGACCTGTGTCAGCAACCTCGCGATGAT
GGTAGACTCGATGAAGACGGGAGCAGTTAACGGAGTGCCCGTGGTCTTCG
TTCTAGATGAGTTCGAGCGTTTCGCCTGCCGGAAGCCTCAGACGCTGCTC
TACGCCTTGCTCGACCTGTGTCAGGATAAGACCATTTGCGCGGCTGTGGT
TGGCCTTTCGGTCAACCTGAACGTCCTGGACGTGGCAGAGAAGAGAGTCA
AGTCCAGATTCTCCTTCCGGCAGGTCGATAAGACCATTTGCGCGGCTGTG
GTTGGCCTTTCGGTCAACCTGAACGTCCTGGACGTGGCAGAGAAGAGAGT
CAAGTCCAGATTCTCCTTCCGGCAGGTC
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