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Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Start | 1 |
| Stop | 1 |
| Cds size | 405 |
| Model size | 807 |
| Exons | 3 |
| Hectar predicted targeting category | other localisation |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622927672.505842-CDS-E-siliculosus-1a_F_contig11580:1192..1597 | 1622927672.505842-CDS-E-siliculosus-1a_F_contig11580:1192..1597 | Ectocarpus siliculosus Ec863f_EcPH12_90f female | CDS | E-siliculosus-1a_F_contig11580 1193..1597 + |
| 1696318633.764227-CDS-E-siliculosus-1a_F_contig11580:1192..1597 | 1696318633.764227-CDS-E-siliculosus-1a_F_contig11580:1192..1597 | Ectocarpus siliculosus Ec863f_EcPH12_90f female | CDS | E-siliculosus-1a_F_contig11580 1193..1597 + |
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-siliculosus-1a_F_contig11580.1031.1 >prot_E-siliculosus-1a_F_contig11580.1031.1 ID=prot_E-siliculosus-1a_F_contig11580.1031.1|Name=mRNA_E-siliculosus-1a_F_contig11580.1031.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=135bp
MWGLTCGVGTKKPNAAVPCLAFDCLAFGSCMTCPSSLWHSNPCHLSPASS
CRVCCPPYFCMSLCVSGLSSSDPHHHAFYERRYAYVEPCHPWTVIKWQTH
LTCPPFVCSLSLSLTPTYPQDGYGQLHGTRRSHR* back to topmRNA from alignment at E-siliculosus-1a_F_contig11580:138..1640+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_E-siliculosus-1a_F_contig11580.1031.1 ID=mRNA_E-siliculosus-1a_F_contig11580.1031.1|Name=mRNA_E-siliculosus-1a_F_contig11580.1031.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=1503bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig11580:138..1640+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
CGCAGCCGTGTTTTATGGATAGGTGTGGGATGGCACTCCAACGGCAATAA
CGGTGAGCACCGAGAGACATGATCAGAGAGTGGTTTCCTGCCGGCACGCC
GCGGATGTGCCGGCCCTTGGCTTTCGGGAGAGTCGAGGCGTGCTACCTTG
CCACTTGGGTGCTCGAAAGCGTCCCATCCCGGGCGATTCCCGACTGAACA
CTGCGCCCCACCCACCAACGGCCACGGCACTTCTTATCTTCCCGGGACTG
TCAGCTTCGTGTGTGTTCCTGCTGTTCCTGCTGCTGCTGCTACCCCGCCG
GCCACAGTCCTTCTCCCTCCAAGAGCTAAGAGACAGGTGCGGTACCCCAC
GCGGTGTAAGCCGTGGATTTGTACGACAAGGACGTTGGCGGCGCCAGGTG
CTTAACCATCAGGCCGTATGTATTGCTGTAGTGTTGGCGTTGTGCTGCTC
CCCGCTCCCTCATGCCTCATGCCTCATGCCTCATGCAGCGGCCAGAGTTC
AGCATGCCCTATCTCCTTTGTTCTGAATGCACCAGTGCAACCCTGTCTCA
GTTGTTGTGAGCGCACCGGTGTGATGCACTCGTACTCGCCTTGCTATTTT
GTTCGCAGCATTCTTTTCGAACGGCTGTGGTGCCACTCTTGGTCACCCCA
CGCCTGCCCCTCCAACATCCCATAGACTACACCTCTCCCACGGCGTGAGC
GGCTTGTGGTATACGTAACATCTGGTACTTATTCCCTGAGTGGGGTTACG
GTGTTCTACTCGCATCAGACTCGACGTATAGACGAGTGATACTGCTGTCC
ATGGGTGCATGCGTTTTGGATTTATTGCAGGGATTTCGGACCTGCGATGC
TCAAAGATGCGAGACACAGCGTGTAGGATAGGCGGGCAACGTGGCAGGCG
TGCGGCTCGCGTGTCTGACACGTAAGAGCAACAAGTTCACCACGGCGAAA
GCGACGTGGAGGCGACGTGGAGGCATGTGAGGTCGTGGCGGTTGCGTATG
CATGCTTTACGTAGCTTGAGTGCTGGACACACATACACACATTACTCCAT
TTGACATGTGGGGTTTGACATGTGGGGTCGGTACGAAGAAGCCGAATGCG
GCTGTCCCTTGTCTGGCATTCGACTGTCTGGCATTCGGCAGTTGCATGAC
GTGTCCATCCTCTTTGTGGCACAGTAACCCTTGCCATTTGTCCCCTGCCT
CGTCCTGCCGCGTGTGTTGCCCCCCTTATTTTTGCATGTCATTGTGCGTT
TCTGGGTTGTCGTCATCCGATCCCCACCATCATGCTTTTTACGAACGTCG
ATATGCATACGTCGAGCCATGTCATCCCTGGACAGTTATCAAGTGGCAAA
CGCACCTGACCTGCCCCCCTTTTGTATGCAGTCTATCTCTTTCTCTAACC
CCTACTTACCCTCAGGATGGCTATGGACAGCTGCACGGCACTCGGCGCTC
GCATCGCTAACAGCTGACCCGGGGGGGCGGGGAGGCACATGCAAGACTAC
AGG back to topCoding sequence (CDS) from alignment at E-siliculosus-1a_F_contig11580:138..1640+ >mRNA_E-siliculosus-1a_F_contig11580.1031.1 ID=mRNA_E-siliculosus-1a_F_contig11580.1031.1|Name=mRNA_E-siliculosus-1a_F_contig11580.1031.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=810bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig11580:138..1640+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
ATGTGGGGTTTGACATGTGGGGTCGGTACGAAGAAGCCGAATGCGGCTGT
CCCTTGTCTGGCATTCGACTGTCTGGCATTCGGCAGTTGCATGACGTGTC
CATCCTCTTTGTGGCACAGTAACCCTTGCCATTTGTCCCCTGCCTCGTCC
TGCCGCGTGTGTTGCCCCCCTTATTTTTGCATGTCATTGTGCGTTTCTGG
GTTGTCGTCATCCGATCCCCACCATCATGCTTTTTACGAACGTCGATATG
CATACGTCGAGCCATGTCATCCCTGGACAGTTATCAAGTGGCAAACGCAC
CTGACCTGCCCCCCTTTTGTATGCAGTCTATCTCTTTCTCTAACCCCTAC
TTACCCTCAGGATGGCTATGGACAGCTGCACGGCACTCGGCGCTCGCATC
GCTAAATGTGGGGTTTGACATGTGGGGTCGGTACGAAGAAGCCGAATGCG
GCTGTCCCTTGTCTGGCATTCGACTGTCTGGCATTCGGCAGTTGCATGAC
GTGTCCATCCTCTTTGTGGCACAGTAACCCTTGCCATTTGTCCCCTGCCT
CGTCCTGCCGCGTGTGTTGCCCCCCTTATTTTTGCATGTCATTGTGCGTT
TCTGGGTTGTCGTCATCCGATCCCCACCATCATGCTTTTTACGAACGTCG
ATATGCATACGTCGAGCCATGTCATCCCTGGACAGTTATCAAGTGGCAAA
CGCACCTGACCTGCCCCCCTTTTGTATGCAGTCTATCTCTTTCTCTAACC
CCTACTTACCCTCAGGATGGCTATGGACAGCTGCACGGCACTCGGCGCTC
GCATCGCTAA back to top
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